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Track the source artifact identity in tiledbsoma #175

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falexwolf opened this issue Dec 3, 2024 · 0 comments
Open

Track the source artifact identity in tiledbsoma #175

falexwolf opened this issue Dec 3, 2024 · 0 comments
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@falexwolf
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I was just reviewing the tiledbsoma guide and noticed that it'd be very hard to reconstruct the lineage in particular of this AnnData that's appended here:

image

But in general, while the run_uid allows to go back to the generating run for every row in the store, if a run appends 100 AnnDatas, it's complicated to know which AnnData ends up there.

Hence, two suggestions:

  1. We encourage users to append AnnData-like artifacts rather than AnnData objects to a store
  2. In addition to the lamin_run_uid, we also store a lamin_source_artifact_uid column
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