From e4c7ddc0ba69a0404875ceda06dc62d618b3c167 Mon Sep 17 00:00:00 2001 From: Sergei Rybakov Date: Sun, 24 Nov 2024 12:48:24 +0100 Subject: [PATCH] =?UTF-8?q?=F0=9F=92=9A=20Fix=20tiledbsoma=20installation?= =?UTF-8?q?=20in=20CI=20(#2208)?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- noxfile.py | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/noxfile.py b/noxfile.py index 455b39766..046b501d2 100644 --- a/noxfile.py +++ b/noxfile.py @@ -90,7 +90,9 @@ def install_ci(session, group): run(session, "uv pip install --system huggingface_hub") elif group == "unit-storage": extras += "aws,zarr,bionty" - run(session, "uv pip install --system tiledbsoma>=1.15.0rc3") + # for tiledbsoma, otherwise resolution fails for some reason + run(session, "uv pip install --system scanpy>=1.10.0") + run(session, "uv pip install --system tiledbsoma>=1.15.0rc3,!=1.15.0rc4") elif group == "tutorial": extras += "aws,jupyter,bionty" run(session, "uv pip install --system huggingface_hub")