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WishList (from NEWS) #56

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leppott opened this issue Dec 1, 2021 · 0 comments
Open

WishList (from NEWS) #56

leppott opened this issue Dec 1, 2021 · 0 comments

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@leppott
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leppott commented Dec 1, 2021

Future Possible Features (Wish List)

  • Add excluded taxa flag to samples based on levels of taxonomy. Will not be completely accurate. Will have many false positives and false negatives. That is, if there are only organisms at the higher level in a sample it will fail. And if there are no organisms of the target group it will pass.

    • Pass, Fail on each. And overall flag
    • Chiro (tribe and family)
    • Oligo
    • Trombidiformes

  • Hi/Lo models.

    • parameter to run "correct" model or all models for each site.
    • Have a field for site type. So can override gradient.

  • Report - QC, use DataExplorer.

  • Table of metrics for each model with DataExplorer report.

  • Include a master taxa list.

    • Match data input and add information (phylo and auteco)
    • Ability to report back unmatched

  • Generate SiteType from data (gradient for PacNW)

  • Update For loop in BCG.Level.Assignment to apply function (similar to BCG.Level.Membership).

  • Any issues as reported on GitHub.
leppott added a commit that referenced this issue Dec 1, 2021
@leppott
v1.3.4.9035
aaf3902 
* fix: Renamed master branch to main
* docs: Move wishlist from NEWS to GitHub Issue #56
* refactor: Updated Rules.xlsx for PacNW BCG, Issue #55
* refactor: Updated Flags.xlsx for PacNW BCG, Issue #55
* tests: Add test for floating point error
    + Rules.xlsx
    + Flags.xlsx
* docs: Update example for additional required columns in
BioMonTools::metric.values()
    + BCG.Metric.Membership()
    + BCG.Level.Membership()
@leppott leppott mentioned this issue Dec 1, 2021
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