expression_outlier_RV_format.md

This is the format of the file created by get_rare_var_gene.sh

• sample_id: sample ID
• gene: gene name
• expressionZScore: expression Zscore
• variantPos: variant position
• gnomadMAF: gnomAD allele frequency
• raw_cadd: CADD score (raw)
• phred_cadd: CADD score (phred)
• variant_gene_pos: upstream/downstream - position of variant relative to the gene