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fix(run-examples): handle simple dictionaries #2734

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fix(run-examples): handle simple dictionaries

fix(run-examples): handle simple dictionaries #2734

Workflow file for this run

.github/workflows/main.yaml at 780e440
# Built from:
# https://docs.github.com/en/actions/guides/building-and-testing-python
# https://github.com/snok/install-poetry#workflows-and-tips
name: Build and test linkml
on:
push:
branches:
- main
pull_request:
branches:
- main
workflow_dispatch:
jobs:
quality-checks:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- name: Install poetry
run: pipx install poetry
- uses: actions/setup-python@v5
with:
python-version: '3.12'
- name: Check pyproject.toml and poetry.lock
run: poetry check
- name: Install tox
run: python -m pip install tox
- name: Run codespell
run: tox -e codespell
- name: Run code quality checks
run: tox -e lint
test:
needs:
- quality-checks
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest, windows-latest]
python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"]
exclude:
# Test on Windows with only the oldest and newest Python versions
- os: windows-latest
python-version: "3.9"
- os: windows-latest
python-version: "3.10"
- os: windows-latest
python-version: "3.11"
# See https://github.com/snok/install-poetry#running-on-windows
defaults:
run:
shell: bash
runs-on: ${{ matrix.os }}
steps:
#----------------------------------------------
# check-out repo and set-up python
#----------------------------------------------
- name: Check out repository
uses: actions/checkout@v4
with:
fetch-depth: 0
- name: Ensure tags if not run from main repo
if: github.repository != 'linkml/linkml'
run: |
git remote add upstream https://github.com/linkml/linkml
git fetch upstream --tags
- name: Install poetry
run: pipx install poetry
- name: Install dynamic versioning plugin
run: poetry self add "poetry-dynamic-versioning[plugin]"
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
id: setup-python
with:
python-version: ${{ matrix.python-version }}
cache: 'poetry'
#----------------------------------------------
# install dependencies
#----------------------------------------------
- name: Install dependencies
run: poetry install --no-interaction --all-extras
#----------------------------------------------
# setup and install graphviz
#----------------------------------------------
- name: Setup Graphviz
uses: ts-graphviz/setup-graphviz@v1
#----------------------------------------------
# coverage report
#----------------------------------------------
- name: Generate coverage results
run: |
poetry run coverage run -m pytest --with-slow --with-network
poetry run coverage xml
poetry run coverage report -m
shell: bash
#----------------------------------------------
# upload coverage results
#----------------------------------------------
- name: Upload coverage report
if: github.repository == 'linkml/linkml'
uses: codecov/codecov-action@v4
with:
name: codecov-results-${{ matrix.os }}-${{ matrix.python-version }}
token: ${{ secrets.CODECOV_TOKEN }}
file: coverage.xml
fail_ci_if_error: true