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libraries.R
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libraries.R
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# CRAN
devtools::install_version("sommer", version = "4.3.1", dependencies = TRUE, repos = "http://cran.us.r-project.org")
devtools::install_version("visNetwork", version = "2.1.2", dependencies = TRUE, repos = "http://cran.us.r-project.org")
devtools::install_version("plotly", version = "4.10.0", dependencies = TRUE, repos = "http://cran.us.r-project.org")
devtools::install_version("BiocManager", version = "1.30.21", dependencies = TRUE, repos = "http://cran.us.r-project.org")
devtools::install_version("QBMS", version = "0.9.1", dependencies = TRUE, repos = "http://cran.us.r-project.org")
# Bioconductor
BiocManager::install("SummarizedExperiment")
BiocManager::install("ggtree")
# GitHub, etc
remotes::install_github("maize-genetics/rtassel", dependencies = TRUE)
remotes::install_github("maize-genetics/rphg", dependencies = TRUE)
remotes::install_github("btmonier/r_flapjack_bytes", dependencies = TRUE)
remotes::install_github("r-lib/async", dependencies = TRUE)
remotes::install_github("icarda-git/QBMS", dependencies = TRUE)
# Link R kernel with Jupyter
IRkernel::installspec()