-
Notifications
You must be signed in to change notification settings - Fork 0
/
NAMESPACE
88 lines (87 loc) · 2.13 KB
/
NAMESPACE
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
# Generated by roxygen2: do not edit by hand
export(PHGLocalCon)
export(PHGMethod)
export(PHGServerCon)
export(brapiURL)
export(brapiVersion)
export(buildHaplotypeGraph)
export(calcMutualInfo)
export(configFilePath)
export(dbName)
export(dbType)
export(gvcfMetrics)
export(host)
export(httProtocol)
export(isDemo)
export(javaMemoryAddress)
export(javaRefObj)
export(numHaploPerRefRange)
export(numberOfChromosomes)
export(numberOfNodes)
export(numberOfRefRanges)
export(numberOfTaxa)
export(phgConObj)
export(phgMethodId)
export(phgMethodType)
export(phgType)
export(plotDot)
export(plotGraph)
export(plotMutualInfo)
export(port)
export(readHaplotypeIds)
export(readPHGDataSet)
export(readRefRanges)
export(readSamples)
export(serverInfo)
export(showPHGMethods)
export(startLogger)
export(taxaByNode)
exportClasses(HaplotypeGraph)
exportClasses(PHGCon)
exportClasses(PHGDataSet)
exportClasses(PHGLocalCon)
exportClasses(PHGMethod)
exportClasses(PHGServerCon)
exportMethods(brapiURL)
exportMethods(brapiVersion)
exportMethods(calcMutualInfo)
exportMethods(configFilePath)
exportMethods(dbName)
exportMethods(dbType)
exportMethods(host)
exportMethods(httProtocol)
exportMethods(isDemo)
exportMethods(javaMemoryAddress)
exportMethods(javaRefObj)
exportMethods(numHaploPerRefRange)
exportMethods(numberOfChromosomes)
exportMethods(numberOfNodes)
exportMethods(numberOfRefRanges)
exportMethods(numberOfTaxa)
exportMethods(phgConObj)
exportMethods(phgMethodId)
exportMethods(phgMethodType)
exportMethods(phgType)
exportMethods(plotGraph)
exportMethods(plotMutualInfo)
exportMethods(port)
exportMethods(readHaplotypeIds)
exportMethods(readPHGDataSet)
exportMethods(readRefRanges)
exportMethods(readSamples)
exportMethods(serverInfo)
exportMethods(showPHGMethods)
exportMethods(taxaByNode)
importFrom(curl,has_internet)
importFrom(ggplot2,aes)
importFrom(ggplot2,facet_grid)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,scale_color_viridis_c)
importFrom(ggplot2,scale_x_continuous)
importFrom(ggplot2,scale_y_continuous)
importFrom(ggplot2,xlab)
importFrom(ggplot2,ylab)
importFrom(methods,setClass)
importFrom(rJava,.jnew)
importFrom(tibble,as_tibble)