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Average kc over all segments in chain #64

Merged
merged 1 commit into from
Nov 30, 2023
Merged

Average kc over all segments in chain #64

merged 1 commit into from
Nov 30, 2023

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bkille
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@bkille bkille commented Nov 30, 2023

Kmer complexities were only averaged for the mergeMappings function, not the mergeMappingsInRange function. This bug doesn't impact any of the alignments, as the kmer-complexity filter is applied to segments before they are chained, but the reported kc tag is incorrect for chains.

@bkille bkille merged commit 9afc465 into master Nov 30, 2023
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