apptainer.def

# Author: Supreeth Suresh
# Affiliation: National Center for Atmospheric Research, Computational and Information Systems Laboratory
# Created: 03-29-2024

Bootstrap: docker
FROM: ssuresh1809/samurai:nvhpc24_3

%labels
    Description This is a container for running samurai on GPU
    Author Supreeth Suresh <ssuresh@ucar.edu>

%post
    mkdir -p /app/ 
    cd /app/
    git clone https://github.com/mmbell/samurai.git && \
    cd samurai && \
    export SAMURAI_ROOT=$(pwd) && \
    export LROSE_INSTALL_DIR=/usr/local && \
    mkdir build && \
    cd build && \
    cmake -DUSE_GPU=false -DDEBUG_COMPILE=false .. && \
    make -j 8 VERBOSE=1
    
    sed -i 's|data_directory = "/glade/campaign/cisl/asap/samurai/data/beltrami";|data_directory = "/app/data/samurai_data/beltrami";|g' /app/samurai/ncar_scripts/TDRP/beltrami.tdrp
     
    echo "#!/bin/bash \n\
    cd /app/samurai/build/release/bin/ \n\
    ./samurai -params /app/samurai/ncar_scripts/TDRP/beltrami.tdrp\
    " > /app/run_samurai.sh

    chmod +x /app/run_samurai.sh

%environment
    export PATH="/app/samurai/build:${PATH}"
    export LD_LIBRARY_PATH="/usr/local/lib:${LD_LIBRARY_PATH}"
    export PATH="/usr/local/bin:${PATH}"

%runscript
    cd /app/
    ./run_samurai.sh