nmdc_doc.yaml

root_dir: "."
documentation_template_repo: "https://github.com/microbiomedata/workflow_documentation.git"
workflows:
    '1_RQC': 'https://github.com/microbiomedata/ReadsQC'
    '2_ReadAnalysis': 'https://github.com/microbiomedata/ReadbasedAnalysis'
    '3_MetaGAssemly': 'https://github.com/microbiomedata/metaAssembly.git'
    '4_MetaGAnnotation': 'https://github.com/microbiomedata/mg_annotation.git'    
    '5_MAG': 'https://github.com/microbiomedata/metaMAGs.git'
    '6_MetaT': 'https://github.com/microbiomedata/metaT.git'
    '7_Metaproteomics': 'https://github.com/microbiomedata/metaPro'
    '8_Metabolomics': 'https://github.com/microbiomedata/metaMS'
    '9_NOM': 'https://github.com/microbiomedata/enviroMS'