smile_message.go

package smile_databricks_gateway

import (
	"github.com/google/uuid"
)

// generated from smile-server/service/src/test/resources/data/published_requests/outgoing_mocked_request2b_all_pairs.json using https://mholt.github.io/json-to-go/
type SmileRequest struct {
	SmileRequestID     uuid.UUID     `json:"smileRequestId"`
	IgoRequestID       string        `json:"igoRequestId"`
	GenePanel          string        `json:"genePanel"`
	ProjectManagerName string        `json:"projectManagerName"`
	PiEmail            string        `json:"piEmail"`
	LabHeadName        string        `json:"labHeadName"`
	LabHeadEmail       string        `json:"labHeadEmail"`
	InvestigatorName   string        `json:"investigatorName"`
	InvestigatorEmail  string        `json:"investigatorEmail"`
	DataAnalystName    string        `json:"dataAnalystName"`
	DataAnalystEmail   string        `json:"dataAnalystEmail"`
	OtherContactEmails string        `json:"otherContactEmails"`
	DataAccessEmails   string        `json:"dataAccessEmails"`
	QcAccessEmails     string        `json:"qcAccessEmails"`
	IsCmoRequest       bool          `json:"isCmoRequest"`
	BicAnalysis        bool          `json:"bicAnalysis"`
	Samples            []SmileSample `json:"samples",omitempty`
	PooledNormals      []string      `json:"pooledNormals"`
	IgoProjectID       string        `json:"igoProjectId"`
}
type QcReports struct {
	QcReportType         string `json:"qcReportType"`
	Comments             string `json:"comments"`
	InvestigatorDecision string `json:"investigatorDecision"`
}
type Runs struct {
	RunMode       string   `json:"runMode"`
	RunID         string   `json:"runId"`
	FlowCellID    string   `json:"flowCellId"`
	ReadLength    string   `json:"readLength"`
	RunDate       string   `json:"runDate"`
	FlowCellLanes []int    `json:"flowCellLanes"`
	Fastqs        []string `json:"fastqs"`
}
type Libraries struct {
	LibraryIgoID             string  `json:"libraryIgoId"`
	LibraryConcentrationNgul float64 `json:"libraryConcentrationNgul"`
	CaptureConcentrationNm   string  `json:"captureConcentrationNm"`
	CaptureInputNg           string  `json:"captureInputNg"`
	CaptureName              string  `json:"captureName"`
	Runs                     []*Runs `json:"runs"`
}
type CmoSampleIDFields struct {
	NaToExtract         string `json:"naToExtract"`
	SampleType          string `json:"sampleType"`
	NormalizedPatientID string `json:"normalizedPatientId"`
	Recipe              string `json:"recipe"`
}
type PatientAliases struct {
	Namespace string `json:"namespace"`
	Value     string `json:"value"`
}
type SampleAliases struct {
	Namespace string `json:"namespace"`
	Value     string `json:"value"`
}
type AdditionalProperties struct {
	IsCmoSample  string `json:"isCmoSample"`
	IgoRequestID string `json:"igoRequestId"`
}
type SmileSample struct {
	SmileSampleID        uuid.UUID             `json:"smileSampleId"`
	SmilePatientID       uuid.UUID             `json:"smilePatientId"`
	CmoSampleName        string                `json:"cmoSampleName"`
	SampleName           string                `json:"sampleName"`
	SampleType           string                `json:"sampleType"`
	OncotreeCode         string                `json:"oncotreeCode"`
	CollectionYear       string                `json:"collectionYear"`
	TubeID               string                `json:"tubeId"`
	CFDNA2DBarcode       string                `json:"cfDNA2dBarcode"`
	QcReports            []*QcReports          `json:"qcReports"`
	Libraries            []*Libraries          `json:"libraries"`
	CmoPatientID         string                `json:"cmoPatientId"`
	PrimaryID            string                `json:"primaryId"`
	InvestigatorSampleID string                `json:"investigatorSampleId"`
	Species              string                `json:"species"`
	Sex                  string                `json:"sex"`
	TumorOrNormal        string                `json:"tumorOrNormal"`
	Preservation         string                `json:"preservation"`
	SampleClass          string                `json:"sampleClass"`
	SampleOrigin         string                `json:"sampleOrigin"`
	TissueLocation       string                `json:"tissueLocation"`
	BaitSet              string                `json:"baitSet"`
	GenePanel            string                `json:"genePanel"`
	Datasource           string                `json:"datasource"`
	IgoComplete          bool                  `json:"igoComplete"`
	CmoSampleIDFields    CmoSampleIDFields     `json:"cmoSampleIdFields"`
	PatientAliases       []*PatientAliases     `json:"patientAliases"`
	SampleAliases        []*SampleAliases      `json:"sampleAliases"`
	AdditionalProperties *AdditionalProperties `json:"additionalProperties"`
}