modules.json

{
    "name": "mskcc/vepcheck",
    "homePage": "https://github.com/mskcc/vepcheck",
    "repos": {
        "https://github.com/mskcc-omics-workflows/modules.git": {
            "modules": {
                "msk": {
                    "genomenexus/annotationpipeline": {
                        "branch": "feature/genome_nexus_final",
                        "git_sha": "7a604e94b5f02a4a3a865e1d0ecd219bec0a623c",
                        "installed_by": ["genome_nexus"]
                    },
                    "genomenexus/vcf2maf": {
                        "branch": "feature/genome_nexus_final",
                        "git_sha": "7a604e94b5f02a4a3a865e1d0ecd219bec0a623c",
                        "installed_by": ["genome_nexus"]
                    }
                }
            },
            "subworkflows": {
                "msk": {
                    "genome_nexus": {
                        "branch": "feature/genome_nexus_final",
                        "git_sha": "ff83f42ee921e361da0adbb3a4f3082d804b41b2",
                        "installed_by": ["subworkflows"]
                    }
                }
            }
        },
        "https://github.com/nf-core/modules.git": {
            "modules": {
                "nf-core": {
                    "fastqc": {
                        "branch": "master",
                        "git_sha": "285a50500f9e02578d90b3ce6382ea3c30216acd",
                        "installed_by": ["modules"]
                    },
                    "multiqc": {
                        "branch": "master",
                        "git_sha": "b7ebe95761cd389603f9cc0e0dc384c0f663815a",
                        "installed_by": ["modules"]
                    }
                }
            },
            "subworkflows": {
                "nf-core": {
                    "utils_nextflow_pipeline": {
                        "branch": "master",
                        "git_sha": "5caf7640a9ef1d18d765d55339be751bb0969dfa",
                        "installed_by": ["subworkflows"]
                    },
                    "utils_nfcore_pipeline": {
                        "branch": "master",
                        "git_sha": "92de218a329bfc9a9033116eb5f65fd270e72ba3",
                        "installed_by": ["subworkflows"]
                    },
                    "utils_nfvalidation_plugin": {
                        "branch": "master",
                        "git_sha": "5caf7640a9ef1d18d765d55339be751bb0969dfa",
                        "installed_by": ["subworkflows"]
                    }
                }
            }
        }
    }
}