forked from taku910/crfpp
-
Notifications
You must be signed in to change notification settings - Fork 11
/
index.html
831 lines (717 loc) · 25.8 KB
/
index.html
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01//EN"
"http://www.w3.org/TR/html4/strict.dtd">
<html>
<head>
<link rev="made" href="mailto:[email protected]">
<title>CRF++: Yet Another CRF toolkit</title>
<link type="text/css" rel="stylesheet" href="default.css">
</head>
<body>
<h1>CRF++: Yet Another CRF toolkit</h1>
<h2>Introduction</h2>
<p><b>CRF++</b> is a simple, customizable, and open source
implementation of <a href="http://www.cis.upenn.edu/~pereira/papers/crf.pdf">Conditional Random Fields (CRFs)</a>
for segmenting/labeling sequential data. CRF++ is designed for generic purpose and will be applied to a variety of NLP tasks, such as
Named Entity Recognition, Information Extraction and Text Chunking.
<h2>Table of contents</h2>
<ul>
<li><a href="#features">Features</a></li>
<li><a href="#news">News</a></li>
<li><a href="#download">Download</a> </li>
<ul>
<li><a href="#source">Source</a></li>
<li><a href="#windows">Binary package for MS-Windows</a></li>
</ul>
<li><a href="#install">Installation</a></li>
<li>
<a href="#usage">Usage</a>
<ul>
<li><a href="#format">Training and Test file formats</a></li>
<li><a href="#templ">Preparing feature templates</a></li>
<li><a href="#training">Training (encoding)</a></li>
<li><a href="#testing">Testing (decoding)</a></li>
</ul>
</li>
<li><a href="#tips">Case studies</a></li>
<li><a href="#tips">Useful Tips</a></li>
<li><a href="#todo">To do</a></li>
<li><a href="#links">Links</a></li>
</ul>
<h2><a name="features">Features</a></h2>
<ul>
<li>Can redefine feature sets</li>
<li>Written in C++ with STL</li>
<li>Fast training based on <a href="http://www-fp.mcs.anl.gov/otc/Guide/SoftwareGuide/Blurbs/lbfgs.html">LBFGS</a>, a quasi-newton algorithm
for large scale numerical optimization problem</li>
<li>Less memory usage both in training and testing</li>
<li>encoding/decoding in practical time</li>
<li>Can perform n-best outputs</li>
<li>Can perform single-best MIRA training</li>
<li>Can output marginal probabilities for all candidates</li>
<li>Available as an open source software</li>
</ul>
<h2><a name="news">News</a></h2>
<ul>
<strong>2013-02-13</strong>: <a href="#download">CRF++ 0.58</a> Released<br>
<ul>
<li>Added createModelFromArray() method to load model file from fixed buffer.
<li>Added getTemplate() method to get template string.
</ul>
<strong>2012-03-25</strong><br>
<ul>
<li>Fixed build issue around libtool.
<li>Fixed C++11 compatible issue.
</ul>
<strong>2012-02-24</strong><br>
<ul>
<li>Added CRFPP:Tagger::set_model() method.
<li>Fixed minor bugs
</ul>
<strong>2012-02-15</strong>: CRF++ 0.55<br>
<ul>
<li>Added new CRFPP:Model class so that multiple threads can share single CRF++ model.
<li>Added Tagger::set_penalty and Tagger::penalty() method for dual decompositon decoding
<li>Fixed crash bug on Windows
<li>Fixed minor bugs
</ul>
<strong>2010-05-16</strong>: CRF++ 0.54</a> Released<br>
<ul>
<li>fixed the bug in L1 regularization. Reported by Fujii Yasuhisa</li>
</ul>
<strong>2009-05-06</strong>: CRF++ 0.5 Released<br>
<ul>
<li>fixed build failure on libtool
</ul>
<strong>2009-04-19</strong>: CRF++ 0.52<br>
<ul>
<li>Code clean up
<li>replaced obsolete sstream with stringstream
</ul>
<strong>2007-07-12</strong>: CRF++ 0.51</a><br>
<ul>
<li>Fixed a compilation error on gcc 4.3
</ul>
<strong>2007-12-09</strong>: CRF++ 0.50<br>
<ul>
<li>Bug fix in --convert mode (Could not generate model from text file)
</ul>
<strong>2007-08-18</strong>: CRF++ 0.49<br>
<ul>
<li>Added setter/getter for nbest, cost_factor and vlevel to API
</ul>
<strong>2007-07-07</strong>: CRF++ 0.48 Released<br>
<ul>
<li>Support L1-CRF. use -a CRF-L1 option to enable L1 regularization.
</ul>
<strong>2007-03-07</strong>: CRF++ 0.47 Released<br>
<ul>
<li>Fixed a bug in MIRA training
</ul>
<strong>2007-02-12</strong>: CRF++ 0.46 Released<br>
<ul>
<li>Changed the licence from LGPL to LGPL/BSD dual
license
<li>Perl/Ruby/Python/Java binding supports (see
perl/ruby/python/java directory respectively)
<li>Code refactoring
</ul>
<strong>2006-11-26</strong>: CRF++ 0.45<br>
<ul>
<li>Support 1-best MIRA training (use -a MIRA option)
</ul>
<strong>2006-08-18</strong>: CRF++ 0.44<br>
<ul>
<li>Fixed a bug in feature extraction</li>
<li>Allowed redundant spaces in training/test files</li>
<li>Determined real column size by looking at template</li>
<li>Added sample code of API (sdk/example.cpp)
<li>Described usage of each API function (crfpp.h)
</ul>
<strong>2006-08-07</strong>: CRF++ 0.43<br>
<ul>
<li>implemented several API functions to get lattice
information</li>
<li>added -c option to control cost-factor
</ul>
<strong>2006-03-31</strong>: CRF++ 0.42<br>
<ul>
<li>Fixed a bug in feature extraction</li>
</ul>
<strong>2006-03-30</strong>: CRF++ 0.41<br>
<ul>
<li>Support parallel training</li>
</ul>
<strong>2006-03-21</strong>: CRF++ 0.40<br>
<ul>
<li>Fixed a fatal memory leak bug</li>
<li>make CRF++ API</li>
</ul>
<strong>2005-10-29</strong>: CRF++ 0.3</a>
<ul>
<li>added -t option that enables you to have not only binary
model but also text model
<li>added -C option for converting a text model to a binary model
</ul>
<strong>2005-07-04</strong>: CRF++ 0.2
Released<br>
<ul>
<li>Fixed several bugs</li>
</ul>
<strong>2005-05-28</strong>: CRF++ 0.1
Released<br>
<ul>
<li>Initial Release</li>
</ul>
</ul>
<h2><a name="download">Download</a></h2>
<ul>
<li><b>CRF++</b> is free software; you can redistribute it
and/or modify it under the terms of the <a href=
"http://www.gnu.org/copyleft/lesser.html">GNU Lesser General
Public License</a> or <a
href="http://www.opensource.org/licenses/bsd-license.php">new BSD License</a></li>
<li>
Please let <a href=
"mailto:[email protected]">me</a> know if you use
<b>CRF++</b> for research purpose or find any research
publications where <b>CRF++</b> is applied.
<h3><a name="source">Source</a></h3>
<ul>
<li>CRF++-0.58.tar.gz: <a href="http://code.google.com/p/crfpp/downloads/list">HTTP</a></li>
</ul>
<h3><a name="windows">Binary package for MS-Windows</a></h3>
<ul>
<li><a href="http://code.google.com/p/crfpp/downloads/list">HTTP</a><br>
</ul>
</li>
</ul>
<h2><a name="install">Installation</a></h2>
<ul>
<li>
Requirements
<ul>
<li>C++ compiler (gcc 3.0 or higher)</li>
</ul>
</li>
<li>
How to make
<pre>
% ./configure
% make
% su
# make install
</pre>
You can change default install path by using --prefix
option of configure script.<br>
Try --help option for finding out other options.
</li>
</ul>
<h2><a name="usage">Usage</a></h2>
<h3><a name="format">Training and Test file formats</a></h3>
<p>Both the training file and the test file need to be in a
particular format for <b>CRF++</b> to work properly.
Generally speaking, training and test file must consist of
multiple <b>tokens</b>. In addition, a <b>token</b>
consists of multiple (but fixed-numbers) columns. The
definition of tokens depends on tasks, however, in
most of typical cases, they simply correspond to
<b>words</b>. Each token must be represented in one line,
with the columns separated by white space (spaces or
tabular characters). A sequence of token becomes a
<b>sentence</b>. To identify the boundary between
sentences, an empty line is put.</p>
<p>You can give as many columns as you like, however the
number of columns must be fixed through all tokens.
Furthermore, there are some kinds of "semantics" among the
columns. For example, 1st column is 'word', second column
is 'POS tag' third column is 'sub-category of POS' and so
on.</p>
<p>The last column represents a true answer tag which is going
to be trained by CRF.</p>
<p>Here's an example of such a file: (data for CoNLL shared
task)</p>
<pre>
He PRP B-NP
reckons VBZ B-VP
the DT B-NP
current JJ I-NP
account NN I-NP
deficit NN I-NP
will MD B-VP
narrow VB I-VP
to TO B-PP
only RB B-NP
# # I-NP
1.8 CD I-NP
billion CD I-NP
in IN B-PP
September NNP B-NP
. . O
He PRP B-NP
reckons VBZ B-VP
..
</pre>
<p>There are 3 columns for each token.</p>
<ul>
<li>The word itself (e.g. reckons);</li>
<li>part-of-speech associated with the word (e.g. VBZ);</li>
<li>Chunk(answer) tag represented in IOB2 format;</li>
</ul>
<p>The following data is invalid, since the number of
columns of second and third are 2. (They have no POS
column.) The number of columns should be fixed.</p>
<pre>
He PRP B-NP
reckons B-VP
the B-NP
current JJ I-NP
account NN I-NP
..
</pre>
<h3><a name="templ">Preparing feature templates</a></h3>
<p>
As CRF++ is designed as a general purpose tool, you have to
specify the feature templates in advance. This file describes
which features are used in training and testing.
</p>
<ul>
<li>Template basic and macro</li>
<p>
Each line in the template file denotes one <i>template</i>.
In each template, special macro <i>%x[row,col]</i> will be
used to specify a token in the input data. <i>row</i> specfies the
relative position from the current focusing token
and <i>col</i> specifies the absolute position of the column.
</p>
<p>Here you can find some examples for the replacements</p>
<pre>
Input: Data
He PRP B-NP
reckons VBZ B-VP
the DT B-NP << CURRENT TOKEN
current JJ I-NP
account NN I-NP
</pre>
<p>
<table border>
<tr>
<td>template</td>
<td>expanded feature</td>
</tr>
<tr>
<td><b>%x[0,0]</b></td>
<td>the</td>
</tr>
<tr>
<td><b>%x[0,1]</b></td>
<td>DT</td>
</tr>
<tr>
<td><b>%x[-1,0]</b></td>
<td>reckons</td>
</tr>
<tr>
<td><b>%x[-2,1]</b></td>
<td>PRP</td>
</tr>
<tr>
<td><b>%x[0,0]/%x[0,1]</b></td>
<td>the/DT</td>
</tr>
<tr>
<td><b>ABC%x[0,1]123</b></td>
<td>ABCDT123</td>
</tr>
</table>
</p>
<br>
<li>Template type</li>
<p>Note also that there are two types of templates.
The types are specified with the first character of templates.
</p>
<ul>
<li>Unigram template: first character, <b>'U'</b></li>
<p>
This is a template to describe unigram features.
When you give a template "U01:%x[0,1]", CRF++ automatically
generates a set of feature functions (func1 ... funcN) like:
</p>
<pre>
func1 = if (output = B-NP and feature="U01:DT") return 1 else return 0
func2 = if (output = I-NP and feature="U01:DT") return 1 else return 0
func3 = if (output = O and feature="U01:DT") return 1 else return 0
....
funcXX = if (output = B-NP and feature="U01:NN") return 1 else return 0
funcXY = if (output = O and feature="U01:NN") return 1 else return 0
...</pre>
<p>
The number of feature functions generated by a template amounts to
(L * N), where L is the number of output classes and N is the
number of unique string expanded from the given template.
</p>
<li>Bigram template: first character, <b>'B'</b></li>
<p>
This is a template to describe bigram features.
With this template, a combination of the current output token and previous output token
(bigram) is automatically generated. Note that this type of template generates a total of
(L * L * N) distinct features, where L is the
number of output classes and N is the number
of unique features generated by the templates.
When the number of classes is large, this type of templates would produce
a tons of distinct features that would cause inefficiency both
in training/testing.
</p>
<li>What is the diffrence between unigram and bigram features?</li>
<p>
The words unigram/bigram are confusing, since a macro for unigram-features
does allow you to write word-level bigram like %x[-1,0]%x[0,0]. Here,
unigram and bigram features mean uni/bigrams of output tags.</p>
<ul>
<li>unigram: |output tag| x |all possible strings expanded with a macro|</li>
<li>bigram: |output tag| x |output tag| x |all possible strings expanded with a macro|</li>
</ul>
<p></p>
</ul>
<li>Identifiers for distinguishing relative positions</li>
<p>
You also need to put an identifier in templates when relative positions of
tokens must be distinguished.
</p>
<p>
In the following case, the macro "%x[-2,1]" and "%x[1,1]" will be replaced
into "DT". But they indicates different "DT".
</p>
<pre>
The DT B-NP
pen NN I-NP
is VB B-VP << CURRENT TOKEN
a DT B-NP
</pre>
<p>To distinguish both two, put an unique identifier (U01: or U02:) in the
template:</p>
<pre>
U01:%x[-2,1]
U02:%x[1,1]
</pre>
<p>
In this case both two templates are regarded as different ones, as
they are expanded into different features, "U01:DT" and "U02:DT".
You can use any identifier whatever you like, but
it is useful to use numerical numbers to manage them, because they simply
correspond to feature IDs.
</p>
<p>
If you want to use "bag-of-words" feature, in other words,
not to care the relative position of features, You don't need to
put such identifiers.
</p>
<li>Example</li>
<p>Here is the template example for <a href="http://www.cnts.ua.ac.be/conll2000/chunking/">CoNLL 2000</a> shared task and Base-NP chunking
task. Only one bigram template ('B') is used. This means that
only combinations of previous output token and current token are
used as bigram features. The lines starting from # or empty lines are
discarded as comments</p>
<pre>
# Unigram
U00:%x[-2,0]
U01:%x[-1,0]
U02:%x[0,0]
U03:%x[1,0]
U04:%x[2,0]
U05:%x[-1,0]/%x[0,0]
U06:%x[0,0]/%x[1,0]
U10:%x[-2,1]
U11:%x[-1,1]
U12:%x[0,1]
U13:%x[1,1]
U14:%x[2,1]
U15:%x[-2,1]/%x[-1,1]
U16:%x[-1,1]/%x[0,1]
U17:%x[0,1]/%x[1,1]
U18:%x[1,1]/%x[2,1]
U20:%x[-2,1]/%x[-1,1]/%x[0,1]
U21:%x[-1,1]/%x[0,1]/%x[1,1]
U22:%x[0,1]/%x[1,1]/%x[2,1]
# Bigram
B
</pre>
</ul>
</ul>
<h3><a name="training">Training (encoding)</a></h3>
<p>Use <i>crf_learn</i> command:
<pre>
% crf_learn template_file train_file model_file
</pre>
<p>
where <i>template_file</i> and <i>train_file</i>
are the files you need to prepare in advance.
<i>crf_learn</i> generates the trained model file in
<i>model_file</i>.
</p>
<p>crf_learn outputs the following information.</p>
<pre>
CRF++: Yet Another CRF Tool Kit
Copyright(C) 2005 Taku Kudo, All rights reserved.
reading training data: 100.. 200.. 300.. 400.. 500.. 600.. 700.. 800..
Done! 1.94 s
Number of sentences: 823
Number of features: 1075862
Number of thread(s): 1
Freq: 1
eta: 0.00010
C: 1.00000
shrinking size: 20
Algorithm: CRF
iter=0 terr=0.99103 serr=1.00000 obj=54318.36623 diff=1.00000
iter=1 terr=0.35260 serr=0.98177 obj=44996.53537 diff=0.17161
iter=2 terr=0.35260 serr=0.98177 obj=21032.70195 diff=0.53257
iter=3 terr=0.23879 serr=0.94532 obj=13642.32067 diff=0.35138
iter=4 terr=0.15324 serr=0.88700 obj=8985.70071 diff=0.34134
iter=5 terr=0.11605 serr=0.80680 obj=7118.89846 diff=0.20775
iter=6 terr=0.09305 serr=0.72175 obj=5531.31015 diff=0.22301
iter=7 terr=0.08132 serr=0.68408 obj=4618.24644 diff=0.16507
iter=8 terr=0.06228 serr=0.59174 obj=3742.93171 diff=0.18953
</pre>
<ul>
<li>iter: number of iterations processed</li>
<li>terr: error rate with respect to tags. (# of error tags/# of all tag)</li>
<li>serr: error rate with respect to sentences. (# of error sentences/#
of all sentences)</li>
<li>obj: current object value. When this value converges to a
fixed point, CRF++ stops the iteration.</li>
<li>diff: relative difference from the previous object value.</li>
</ul>
<p>
There are 4 major parameters to control the training condition
<ul>
<li>-a CRF-L2 or CRF-L1:<br>
Changing the regularization algorithm. Default setting is L2.
Generally speaking, L2 performs slightly better than L1, while
the number of non-zero features in L1 is drastically smaller than
that in L2.
<li>-c float: <br>
With this option, you can change the hyper-parameter for the CRFs.
With larger C value, CRF tends to overfit to the give training corpus.
This parameter trades the balance between overfitting and
underfitting. The results will significantly be influenced by
this parameter. You can find an optimal value by using
held-out data or more general model selection method such as
cross validation.
<li>-f NUM:<br>
This parameter sets the cut-off threshold for the features.
CRF++ uses the features that occurs no less than NUM times
in the given training data. The default value is 1.
When you apply CRF++ to large data, the number of unique features
would amount to several millions. This option is useful in such cases.
<li>-p NUM:<br>
If the PC has multiple CPUs, you can make the training faster
by using multi-threading. NUM is the number of threads.
</ul>
<p>Here is the example where these two parameters are used.</p>
<pre>
% crf_learn -f 3 -c 1.5 template_file train_file model_file
</pre>
<p>Since version 0.45, CRF++ supports single-best MIRA training.
MIRA training is used when -a MIRA option is set.
<pre>
% crf_learn -a MIRA template train.data model
CRF++: Yet Another CRF Tool Kit
Copyright(C) 2005 Taku Kudo, All rights reserved.
reading training data: 100.. 200.. 300.. 400.. 500.. 600.. 700.. 800..
Done! 1.92 s
Number of sentences: 823
Number of features: 1075862
Number of thread(s): 1
Freq: 1
eta: 0.00010
C: 1.00000
shrinking size: 20
Algorithm: MIRA
iter=0 terr=0.11381 serr=0.74605 act=823 uact=0 obj=24.13498 kkt=28.00000
iter=1 terr=0.04710 serr=0.49818 act=823 uact=0 obj=35.42289 kkt=7.60929
iter=2 terr=0.02352 serr=0.30741 act=823 uact=0 obj=41.86775 kkt=5.74464
iter=3 terr=0.01836 serr=0.25881 act=823 uact=0 obj=47.29565 kkt=6.64895
iter=4 terr=0.01106 serr=0.17011 act=823 uact=0 obj=50.68792 kkt=3.81902
iter=5 terr=0.00610 serr=0.10085 act=823 uact=0 obj=52.58096 kkt=3.98915
iter=0 terr=0.11381 serr=0.74605 act=823 uact=0 obj=24.13498 kkt=28.00000
...
</pre>
<ul>
<li>iter, terr, serror: same as CRF training</li>
<li>act: number of active examples in working set</li>
<li>uact: number of examples whose dual parameters reach soft margin
upper-bound C. 0 uact suggests that given training data was
linear separable</li>
<li>obj: current object value, ||w||^2</li>
<li>kkt: max kkt violation value. When it gets 0.0, MIRA training finishes</li>
</ul>
<p>There are some parameters to control the MIRA training condition</p>
<ul>
<li>-c float: <br>
Changes soft margin parameter, which is an analogue to the soft margin
parameter C in Support Vector Machines.
The definition is basically the same as -c option in CRF training.
With larger C value, MIRA tends to overfit to the give training
corpus.
<li>-f NUM:<br>
Same as CRF
<li>-H NUM:<br>
Changes shrinking size. When a training sentence is not used
in updating parameter vector NUM times, we can consider that the
instance doesn't contribute training any more. MIRA tries to
remove such instances. The process is called
"shrinking". When setting smaller NUM, shrinking occurs in early
stage, which drastically reduces
training time. However, too small NUM is not recommended.
When training finishes, MIRA tries to go through all training
examples again to know whether or not all KKT conditions are really
satisfied. Too small NUM would increase the chances of recheck.
</ul>
<h3><a name="testing">Testing (decoding)</a></h3>
<p>Use <i>crf_test</i> command:
<pre>
% crf_test -m model_file test_files ...
</pre>
<p>
where <i>model_file</i> is the file <i>crf_learn</i>creates.
In the testing, you don't need to specify the template file,
because the model file has the same information for the template.
<i>test_file</i> is the test data you want to assign sequential tags.
This file has to be written in the same format as training file.
</p>
<p>
Here is an output of <i>crf_test</i>:</p>
<pre>
% crf_test -m model test.data
Rockwell NNP B B
International NNP I I
Corp. NNP I I
's POS B B
Tulsa NNP I I
unit NN I I
..
</pre>
<p>The last column is given (estimated) tag.
If the 3rd column is true answer tag , you can evaluate the accuracy
by simply seeing the difference between the 3rd and 4th columns.</p>
<ul>
<li>verbose level</li>
<p>The <b>-v</b> option sets verbose level. default
value is 0. By increasing the level, you can have an
extra information from CRF++</p>
<ul>
<li>level 1 <br>
You can also have marginal probabilities for each tag
(a kind of confidece measure for each output tag)
and a conditional probably for the output (confidence measure for
the entire output).
<pre>
% crf_test -v1 -m model test.data| head
# 0.478113
Rockwell NNP B B/0.992465
International NNP I I/0.979089
Corp. NNP I I/0.954883
's POS B B/0.986396
Tulsa NNP I I/0.991966
...
</pre>
<p>
The first line "# 0.478113" shows the conditional probably for the output.
Also, each output tag has a probability represented like "B/0.992465".
</p>
<li>level 2<br>
<p>You can also have marginal probabilities for all other candidates.</p>
<pre>
% crf_test -v2 -m model test.data
# 0.478113
Rockwell NNP B B/0.992465 B/0.992465 I/0.00144946 O/0.00608594
International NNP I I/0.979089 B/0.0105273 I/0.979089 O/0.0103833
Corp. NNP I I/0.954883 B/0.00477976 I/0.954883 O/0.040337
's POS B B/0.986396 B/0.986396 I/0.00655976 O/0.00704426
Tulsa NNP I I/0.991966 B/0.00787494 I/0.991966 O/0.00015949
unit NN I I/0.996169 B/0.00283111 I/0.996169 O/0.000999975
..
</pre>
</ul>
<li>N-best outputs</li>
<p>
With the <b>-n</b> option, you can obtain N-best results
sorted by the conditional probability of CRF.
With n-best output mode, CRF++ first gives one additional line like "# N prob", where N means that
rank of the output starting from 0 and prob denotes the conditional
probability for the output. </p>
<p>Note that CRF++ sometimes
discards enumerating N-best results if it cannot find candidates any
more. This is the case when you give CRF++ a short
sentence.</p>
<p>CRF++ uses a combination of forward Viterbi and backward A* search. This combination
yields the exact list of n-best results. </p>
<p>Here is the example of the N-best results. </p>
<pre>
% crf_test -n 20 -m model test.data
# 0 0.478113
Rockwell NNP B B
International NNP I I
Corp. NNP I I
's POS B B
...
# 1 0.194335
Rockwell NNP B B
International NNP I I
</pre>
</ul>
</ul>
<h2><a name="testing">Tips</a></h2>
<ul>
<li>CRF++ uses the exactly same data format as <a
href="http://chasen.org/~taku/software/yamcha/">YamCha</a> uses.
You may use both two toolkits for an input data and compare the
performance between CRF and SVM
<li>The output of CRF++ is also compatible to <a href="http://www.cnts.ua.ac.be/conll2000/chunking/">CoNLL 2000</a> shared task.
This allows us to use the perl script
<a href="http://www.cnts.ua.ac.be/conll2000/chunking/output.html">
conlleval.pl</a> to
evaluate system outputs. This script is very useful and
give us a list of F-measures for all chunk types
</ul>
<h2><a name="training">Case studies</a></h2>
<p>
In the example directories, you can find three case studies, baseNP
chunking, Text Chunking, and Japanese named entity recognition, to use CRF++.
</p>
<p>
In each directory, please try the following commands
</p>
<pre> % crf_learn template train model
% crf_test -m model test </pre>
<h2><a name="todo">To Do</a></h2>
<ul>
<li>Support <a
href="http://www-2.cs.cmu.edu/~wcohen/postscript/semiCRF.pdf">semi-Markov
CRF</a>
<li>Support <a
href="http://www.cs.umass.edu/~mccallum/papers/lcrf-nips2004.pdf">
piece-wise CRF</a>
<li>Provide useful C++/C API (Currently no APIs are available)
</ul>
<h2><a name="links">References</a></h2>
<ul>
<li>J. Lafferty, A. McCallum, and F. Pereira.
<a href="http://www.cis.upenn.edu/~pereira/papers/crf.pdf">Conditional random fields: Probabilistic models for segmenting and
labeling sequence data</a>, In Proc. of ICML, pp.282-289, 2001
<li>F. Sha and F. Pereira. <a
href="http://www.cis.upenn.edu/~feisha/pubs/shallow03.pdf">Shallow
parsing with conditional random fields</a>, In Proc. of HLT/NAACL 2003
<li><a
href="http://staff.science.uva.nl/~erikt/research/np-chunking.html">NP chunking</a></li>
<li><a href= "http://www.cnts.ua.ac.be/conll2000/chunking/">CoNLL
2000 shared task: Chunking</a></li>
</ul>
<hr>
<p>$Id: index.html,v 1.23 2003/01/06 13:11:21 taku-ku Exp
$;</p>
<address>
</address>
</body>
</html>