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Releases: murphygroup/CellSegmentationEvaluator

v1.5 convert to PyPI package

08 Feb 17:51
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Reconcile differences with the 3D cell segmentation evaluation code in 3DCellComposer. Convert seg_eval_pkg.py to a PyPI package named CellSegmentationEvaluator and import that package for use in SimpleCSE. Add new function CSE3D as an alternative to "single_method_eval_3D" so that inputs can be nd-arrays rather than AICSImage structures.

v1.4 Simple CSE

12 Dec 03:50
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Added cell nuclear matching and repairing.

v1.3 Simple CSE

24 Nov 01:00
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Updates to Metrics for 3D Cell Segmentation: Updated existing metrics and introduced new ones to enhance the evaluation of 3D cell segmentation.

Refined Quality Score Calculation: Adjusted the quality score calculation to have a lower bound of 0, providing a clearer reference point for users.

v1.2 Simple CSE

05 Jan 16:12
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Created a slim version of CellSegmentationEvaluator (SimpleCSE) that solely calculate the evaluation metrics and segmentation quality score for cell segmentation methods.