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National Center for Genome Resources

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  1. UMI-analysis UMI-analysis Public

    Scripts for processing Illumina sequence data containing unique molecular identifiers (UMI)

    C 7 1

  2. java java Public

    Various Java apps written at NCGR for a variety of purposes.

    Java 5 3

  3. tapioca tapioca Public

    Tapioca is a pipeline for Illumina Casava 1.8 genome analyzer/hiseq data.

    3 1

  4. quorum quorum Public archive

    A flexible bioinformatics search tool.

    Ruby 2 1

  5. lis_sequence_search lis_sequence_search Public archive

    LIS sequence search

    JavaScript 2

  6. rbpa rbpa Public

    Transcriptome Assembly Pipeline BPA2.1.0

    Shell 2 1

Repositories

Showing 10 of 50 repositories
  • DE-Bookdown Public

    Differential Expression Workshop

    ncgr/DE-Bookdown’s past year of commit activity
    HTML 0 0 0 0 Updated Nov 27, 2024
  • NIGMS-Sandbox-Pangenomics-Module Public
    ncgr/NIGMS-Sandbox-Pangenomics-Module’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Nov 25, 2024
  • Metagenomics-Bookdown Public template
    ncgr/Metagenomics-Bookdown’s past year of commit activity
    TeX 0 0 0 0 Updated Nov 8, 2024
  • ncgr-INBRE-Bookdown Public
    ncgr/ncgr-INBRE-Bookdown’s past year of commit activity
    TeX 0 0 1 0 Updated Oct 22, 2024
  • java Public

    Various Java apps written at NCGR for a variety of purposes.

    ncgr/java’s past year of commit activity
    Java 5 3 0 0 Updated Aug 25, 2024
  • NISE-bioinformatics Public
    ncgr/NISE-bioinformatics’s past year of commit activity
    HTML 0 0 0 0 Updated Jul 24, 2024
  • hyena-dna Public Forked from HazyResearch/hyena-dna

    Official implementation for HyenaDNA, a long-range genomic foundation model built with Hyena

    ncgr/hyena-dna’s past year of commit activity
    Assembly 0 Apache-2.0 84 0 0 Updated Jun 15, 2024
  • Coworking Public

    NCGR Coworking Studios

    ncgr/Coworking’s past year of commit activity
    HTML 0 0 0 0 Updated May 1, 2024
  • NISE Public archive

    Summer Internship with NMSU

    ncgr/NISE’s past year of commit activity
    HTML 0 0 0 0 Updated Apr 16, 2024
  • Cyprinodon Public

    Pilot Project NNMC Cvar, Cbron, Cdes

    ncgr/Cyprinodon’s past year of commit activity
    HTML 0 0 0 0 Updated Mar 26, 2024
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