Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

issue with def in nf-core nextflow.config #80

Closed
maxulysse opened this issue Nov 26, 2024 · 3 comments
Closed

issue with def in nf-core nextflow.config #80

maxulysse opened this issue Nov 26, 2024 · 3 comments

Comments

@maxulysse
Copy link

maxulysse commented Nov 26, 2024

It got caught up in a loop, I was first a warning on the n of nextflow warning me about the def that should not be there.
If I apply the fix, then the warning is on the f of nextflow, saying that I need the def
and so on...

// Disable process selector warnings by default. Use debug profile to enable warnings.
nextflow.enable.configProcessNamesValidation = false

def trace_timestamp = new java.util.Date().format( 'yyyy-MM-dd_HH-mm-ss')
@bentsherman
Copy link
Member

I think this is being addressed in the pipeline template: nf-core/tools#3294

@ewels
Copy link
Member

ewels commented Nov 27, 2024

And the nextflow.enable.configProcessNamesValidation warning is already fixed and soon to be released I think, right?

@maxulysse
Copy link
Author

Thanks

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

3 participants