From b61c18a58842fb1d694120ba1c79b3da6bdfca0d Mon Sep 17 00:00:00 2001 From: Jennifer Chang Date: Thu, 30 May 2024 17:50:17 -0700 Subject: [PATCH] fixup: dataset with root --- nextclade/datasets/all/genome_annotation.gff3 | 26 +++++++++---------- nextclade/datasets/all/tree.json | 2 +- 2 files changed, 14 insertions(+), 14 deletions(-) diff --git a/nextclade/datasets/all/genome_annotation.gff3 b/nextclade/datasets/all/genome_annotation.gff3 index a417d706..3d63959e 100644 --- a/nextclade/datasets/all/genome_annotation.gff3 +++ b/nextclade/datasets/all/genome_annotation.gff3 @@ -1,14 +1,14 @@ ##gff-version 3 -##sequence-region NC_002640.1 1 10649 -NC_002640.1 feature gene 102 440 . + . codon_start=1;gene=C;gene_name=C; -NC_002640.1 feature gene 441 713 . + . codon_start=1;gene=pr;gene_name=pr; -NC_002640.1 feature gene 441 938 . + . codon_start=1;gene=M;gene_name=M; -NC_002640.1 feature gene 939 2423 . + . codon_start=1;gene=E;gene_name=E; -NC_002640.1 feature gene 2424 3479 . + . codon_start=1;gene=NS1;gene_name=NS1; -NC_002640.1 feature gene 3480 4133 . + . codon_start=1;gene=NS2A;gene_name=NS2A; -NC_002640.1 feature gene 4134 4523 . + . codon_start=1;gene=NS2B;gene_name=NS2B; -NC_002640.1 feature gene 4524 6377 . + . codon_start=1;gene=NS3;gene_name=NS3; -NC_002640.1 feature gene 6378 6758 . + . codon_start=1;gene=NS4A;gene_name=NS4A; -NC_002640.1 feature gene 6759 6827 . + . codon_start=1;gene=2K;gene_name=2K; -NC_002640.1 feature gene 6828 7562 . + . codon_start=1;gene=NS4B;gene_name=NS4B; -NC_002640.1 feature gene 7563 10262 . + . codon_start=1;gene=NS5;gene_name=NS5; \ No newline at end of file +##sequence-region Reconstructed_root_sequence_of_https_nextstrain_org_dengue/all/genome 1 10649 +Reconstructed_root_sequence_of_https_nextstrain_org_dengue/all/genome feature gene 102 440 . + . codon_start=1;gene=C;gene_name=C; +Reconstructed_root_sequence_of_https_nextstrain_org_dengue/all/genome feature gene 441 713 . + . codon_start=1;gene=pr;gene_name=pr; +Reconstructed_root_sequence_of_https_nextstrain_org_dengue/all/genome feature gene 441 938 . + . codon_start=1;gene=M;gene_name=M; +Reconstructed_root_sequence_of_https_nextstrain_org_dengue/all/genome feature gene 939 2423 . + . codon_start=1;gene=E;gene_name=E; +Reconstructed_root_sequence_of_https_nextstrain_org_dengue/all/genome feature gene 2424 3479 . + . codon_start=1;gene=NS1;gene_name=NS1; +Reconstructed_root_sequence_of_https_nextstrain_org_dengue/all/genome feature gene 3480 4133 . + . codon_start=1;gene=NS2A;gene_name=NS2A; +Reconstructed_root_sequence_of_https_nextstrain_org_dengue/all/genome feature gene 4134 4523 . + . codon_start=1;gene=NS2B;gene_name=NS2B; +Reconstructed_root_sequence_of_https_nextstrain_org_dengue/all/genome feature gene 4524 6377 . + . codon_start=1;gene=NS3;gene_name=NS3; +Reconstructed_root_sequence_of_https_nextstrain_org_dengue/all/genome feature gene 6378 6758 . + . codon_start=1;gene=NS4A;gene_name=NS4A; +Reconstructed_root_sequence_of_https_nextstrain_org_dengue/all/genome feature gene 6759 6827 . + . codon_start=1;gene=2K;gene_name=2K; +Reconstructed_root_sequence_of_https_nextstrain_org_dengue/all/genome feature gene 6828 7562 . + . codon_start=1;gene=NS4B;gene_name=NS4B; +Reconstructed_root_sequence_of_https_nextstrain_org_dengue/all/genome feature gene 7563 10262 . + . codon_start=1;gene=NS5;gene_name=NS5; \ No newline at end of file diff --git a/nextclade/datasets/all/tree.json b/nextclade/datasets/all/tree.json index 05066e2b..1f0b6766 100644 --- a/nextclade/datasets/all/tree.json +++ b/nextclade/datasets/all/tree.json @@ -1 +1 @@ -{"version": "v2", "meta": {"title": "Real-time tracking of dengue virus evolution", "updated": "2024-05-25", "build_url": "https://github.com/nextstrain/dengue", "maintainers": [{"name": "the Nextstrain team", "url": "https://nextstrain.org/team"}], "display_defaults": {"map_triplicate": true, "color_by": "clade_membership"}, "genome_annotations": {"nuc": {"end": 10649, "start": 1, "strand": "+", "type": "source", "seqid": "../phylogenetic/config/reference_all_genome.gb"}, "2K": {"end": 6827, "seqid": "../phylogenetic/config/reference_all_genome.gb", "start": 6759, "strand": "+", "type": "CDS"}, "C": {"end": 440, "seqid": "../phylogenetic/config/reference_all_genome.gb", "start": 102, "strand": "+", "type": "CDS"}, "E": {"end": 2423, "seqid": "../phylogenetic/config/reference_all_genome.gb", "start": 939, "strand": "+", "type": "CDS"}, "M": {"end": 938, "seqid": "../phylogenetic/config/reference_all_genome.gb", "start": 441, "strand": "+", "type": "CDS"}, "NS1": {"end": 3479, "seqid": "../phylogenetic/config/reference_all_genome.gb", "start": 2424, "strand": "+", "type": "CDS"}, "NS2A": {"end": 4133, "seqid": "../phylogenetic/config/reference_all_genome.gb", "start": 3480, "strand": "+", "type": "CDS"}, "NS2B": {"end": 4523, "seqid": "../phylogenetic/config/reference_all_genome.gb", "start": 4134, "strand": "+", "type": "CDS"}, "NS3": {"end": 6377, "seqid": "../phylogenetic/config/reference_all_genome.gb", "start": 4524, "strand": "+", "type": "CDS"}, "NS4A": {"end": 6758, "seqid": "../phylogenetic/config/reference_all_genome.gb", "start": 6378, "strand": "+", "type": "CDS"}, "NS4B": {"end": 7562, "seqid": "../phylogenetic/config/reference_all_genome.gb", "start": 6828, "strand": "+", "type": "CDS"}, "NS5": {"end": 10262, "seqid": "../phylogenetic/config/reference_all_genome.gb", "start": 7563, "strand": "+", "type": "CDS"}, "pr": {"end": 713, "seqid": "../phylogenetic/config/reference_all_genome.gb", "start": 441, "strand": "+", "type": "CDS"}}, "colorings": [{"key": "gt", "title": "Genotype", "type": "categorical"}, {"key": "num_date", "title": "Date", "type": "continuous"}, {"key": "country", "title": "Country", "type": "categorical", "scale": [["Israel", "#5E1D9D"], ["United Arab Emirates", "#4D22AE"], ["Pakistan", "#4B26B1"], ["India", "#472DB8"], ["Sri Lanka", "#4531BC"], ["Nepal", "#4335BF"], 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"#9FBE59"], ["Seychelles", "#A2BE57"], ["United Kingdom", "#AFBD4F"], ["France", "#B2BD4D"], ["Germany", "#B8BC4A"], ["Argentina", "#CAB843"], ["Paraguay", "#D1B340"], ["Bolivia", "#D4B13F"], ["Brazil", "#D6B03F"], ["Peru", "#D8AE3E"], ["Ecuador", "#DBAC3D"], ["Colombia", "#DDAA3C"], ["Guyana", "#DFA43B"], ["Venezuela", "#E0A13A"], ["Trinidad and Tobago", "#E29E39"], ["Grenada", "#E69237"], ["Nicaragua", "#E68D36"], ["El Salvador", "#E68033"], ["Saint Lucia", "#E67C33"], ["Honduras", "#E67832"], ["Dominica", "#E67431"], ["Guatemala", "#E56E30"], ["Guadeloupe", "#E5692F"], ["Saint Martin", "#E04E2A"], ["Jamaica", "#E04929"], ["Dominican Republic", "#DF4328"], ["Haiti", "#DE3E27"], ["Mexico", "#DE3826"], ["Cuba", "#DD3325"], ["Bahamas", "#DC2D24"], ["USA", "#DB2823"]]}, {"key": "region", "title": "Region", "type": "categorical", "scale": [["Asia", "#447CCD"], ["Oceania", "#5EA9A1"], ["Africa", "#8ABB6A"], ["Europe", "#BEBB48"], ["South America", "#E29E39"], ["North America", "#E2562B"]]}, {"key": "genotype_nextclade", "title": "Dengue Genotype (Nextclade)", "type": "categorical", "scale": [["DENV1/I", "#5E1D9D"], ["DENV1/II", "#472DB8"], ["DENV1/III", "#3F48C9"], ["DENV1/IV", "#4066CF"], ["DENV1/V", "#4682C9"], ["DENV2/AA", "#5097BA"], ["DENV2/AI", "#5CA7A5"], ["DENV2/AII", "#6CB28D"], ["DENV2/AM", "#7FB976"], ["DENV2/C", "#93BD62"], ["DENV2/S", "#A9BD53"], ["DENV3/I", "#BFBB48"], ["DENV3/II", "#D1B340"], ["DENV3/III", "#DFA53B"], ["DENV3/IV", "#E68F36"], ["DENV4/I", "#E67231"], ["DENV4/II", "#E04D29"], ["DENV4/S", "#DB2823"]]}, {"key": "serotype_genbank", "title": "Serotype (Genbank metadata)", "type": "categorical", "scale": [["denv1", "#4A8CC2"], ["denv2", "#71B486"], ["denv3", "#ABBD52"], ["denv4", "#DEA73C"]]}, {"key": "clade_membership", "title": "Serotype (Nextstrain)", "type": "categorical"}], "filters": ["country", "region", "author"], "geo_resolutions": [{"key": "country", "demes": {"Nepal": {"latitude": 28.0, "longitude": 84.0}, "Colombia": 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"H865Q", "T869N", "N873S", "K877N", "V881I", "V886S", "Y890F", "S891R", "A892N", "P893E", "S894E", "S896N"], "pr": ["S2H", "S4T", "L11H", "A15S", "R21K", "P22S", "T28A", "E29D", "K33M", "M44L", "V49I", "V57T", "N58E", "L70P", "M76T", "S83T", "R86H"]}, "labels": {"aa": "2K: I8T, I11V, L12I, T13A, I17M, I18V, G19A, L20T; C: M1N, V7A, V8G, R9K, P25V, G27Q, V29A, T34I, F37L, S38*, K40Q, R44K, M45L, L47M, T51A, V55F, S57A, Q70T, L71F, N74S, I79V, I81R, R89S, G96R, S100T, T101A, T103I, L105I, C106M; E: V6I, A19T, L23V, G29S, Q36K, G37N, T46M, T49E, E52Q, V53P, L55T, T58K, Y59F, S64K, S66T, I68T, A71E, T72S, Y81N, K83V, Q89K, Y90F, I91V, R93K, R94H, D95T, V96M, V113I, S120T, S122L, G123K, T126E, N128K, L129V, I132P, V141I, N145T, T148E, S156T, N157K, V160M, M163K, R167Q, S168A, P169S, S170T, V171A, V173A, P176T, E180T, E186S, S189T, I191L, I197V, M199L, K203N, T205A, K210R, A222S, S227*, V229A, H230N, Y233Q, R236M, M237L, V242N, R247K, T251V, S262T, A265T, V270I, D271Q, S272T, G273S, D274G, 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L242I, S246I, Y247F, F251I, Q258P, A261Y, V265A, I275M, G278D, E279F, P281E, T286V, I287V, Q288T, D292G, H293N, V308I, Q310E, M318L, F323Y, L324I, S339N, M345L, Q349L, T351S; NS2A: Q2H, T4K, S5V, E6D, T7N, M10L, L15M, T16A, V19M, C22V, R25T, T28G, I38V, L40F, C41V, A42T, I43L, L45T, G47N, L48M, M51K, L54V, A56V, L57I, L60V, D62A, G66D, I68M, Q71V, I72T, H73Y, I76L, V79A, S83R, G85I, Y86F, V87A, L88V, V90L, T100I, A101I, V104T, M109L, T110V, V112S, L113F, S114Q, H117D, D118A, L119I, M120V, I123T, S127A, L130I, I131M, L132V, I135M, Q138H, D140E, N141K, T142Y, V144L, L147T, A148I, T152M, F153C, R155K, S156T, P159T, V161N, M162N, R165K, M168T, A169T, V170I, F172A, T175S, I177F, R181L, C184S, S189T, H190D, V192I, E193P, A196L, L197T, L199I, A201V, Q202K, A203P, V206M, Y207F, M209I, M212T, G214T, A215S, S216K, R217K; NS2B: L13M, L16I, G18A, A20S, L28M, M32L, L39I, A41C, M44I, S45T, N58D, Q60K, D62E, M64E, D66E, T68S, S70A, V74I, E75L, K77T, Q78V, D79E, S83T, F84M, R87K, V89E, T92E, M94T, 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"T680L", "A681F", "N702K", "D703N", "Q706E", "E716K", "L717I", "I718F", "T724S", "S758A", "T764S", "A777S", "N778M", "H787E", "F811L", "T812K", "W824N", "E826T", "*832Y", "Q846L", "N869T", "S873N", "N877K", "I881V", "S886A", "F890Y", "R891S", "N892A", "E893P", "E894L", "N896S"], "pr": ["T4S", "H11L", "S15A", "K21R", "S22P", "A28T", "D29E", "M33K", "L44M", "I49V", "T57V", "E58N", "T83S", "H86R"]}, "labels": {"aa": "2K: T8I, V11I, I12L, M17I, V18I, A19G, T20L; C: N1M, A7V, G8V, K9R, V25P, Q27G, A29V, I34T, L37F, *38S, Q40K, K44R, L45M, M47L, A51T, F55V, A57S, T70Q, F71L, S74N, V79I, R81T, S89R, R96G, T100S, A101T, I103T, I105L, M106C; E: I6V, V23L, S29G, K36Q, N37G, M46I, E49T, Q52E, P53V, T55L, K58T, F59Y, K64S, T66S, T68I, E71A, S72T, N81Y, V83K, K89Q, F90Y, V91I, K93R, H94R, T95D, M96V, I113V, T120S, L122S, K123G, E126T, K128N, V129L, P132I, I141V, T145N, E148A, T156S, K157N, M160V, K163T, Q167R, A168S, S169P, T170S, A171V, A173V, T176P, T180E, S186E, T189S, L191I, V197I, L199M, N203K, A205T, R210K, S222A, *227S, A229V, N230H, Q233Y, M236R, L237M, N242V, K247R, V251T, T262S, I270V, Q271D, T272S, S273G, G274D, L277H, R286K, L287V, D290E, K293R, L294I, A300T, T303S, K307S, E309D, I320T, I322V, D329A, F337I, K343N, K345E, N346K, I348V, L351I, T353S, A354S, N355T, I357F, V358A, T359E, E360N, K361T, D362N, P364V, V365T, A369L, E384D, R385S, K388T, N390H, K393R, A404S, A406Y, D417E, V428L, V432L, T442S, G445T, A446T, S449G, T454M, M455I, K456R, V461I, I463V, T464L, M468T, S472N, L475M, S476A, V481A, I484G, V485I, Y488F, V491F, M492T; M: T4S, H11L, S15A, K21R, S22P, A28T, D29E, M33K, L44M, I49V, T57V, E58N, T83S, H86R, V99S, Q119H, T125S, H130N, T134A, I135L, M136L, V138G, L140M, T143M, T146Q, Y148G, V152T, I154F, I156V, L158M, M165Y, T166G; NS1: N7S, K9S, T22I, D37E, T40A, P47L, E51K, E52D, A60T, L66V, H77Y, I78V, N82G, E83G, I84H, K85D, I93V, I96V, E98T, T103A, Q107P, P108V, I109N, E110D, L124F, A126P, V128A, Q129R, P141S, D146E, Q147R, I162M, L169M, L171F, K174G, Y175S, T176S, N191Q, A205S, E208Q, K211Q, F217L, S228T, E240Q, I242L, I246T, F247Y, I251F, P258Q, Y261A, A265M, D278G, F279E, E281P, V286T, V287I, T288Q, N293H, I308V, E310Q, L318M, Y323F, I324L, N339S, L345M, L349Q; NS2A: H2Q, K4T, V5S, D6E, N7T, L10M, M15L, A16T, V22C, T25R, G28T, V38A, F40L, V41C, T42A, L43I, T45L, N47G, M48L, K51M, V56A, V60L, A62D, D66G, V71Q, T72I, Y73H, L76I, A79V, R83S, I85G, F86Y, A87V, V88L, L90V, I100T, I101A, T104V, L109M, V110T, S112V, Q114S, D117H, A118D, I119L, V120M, T123I, I130L, M131I, V132L, E140D, K141N, Y142T, T147L, I148A, M152T, C153F, T159P, N161I, N162M, K165R, T168M, T169A, I170V, A172F, S175T, F177I, L181R, S184C, T189S, D190H, I192V, P193E, L196A, T197I, I199L, V201A, K202Q, P203A, M206V, F207Y, I209M, T212M, T214G, S215A, K216S; NS2B: M13L, I16L, A18G, S20A, M28L, L32M, I39L, C41A, I44M, T45S, D58N, K60Q, E62D, E64M, E66D, S68T, A70S, L75E, T77K, V78Q, E79D, T83S, M84F, K87R, E89V, E92T, T94M, L95I, I97L, M99V, T101L, L104I, V105T, F110Y, S113A, V120L, M126V, K128T; NS3: V3A, P11A, V13A, E14Q, E17T, E19T, D20E, K26M, I30L, S34T, Y41H, K42M, A56S, L58I, M59C, K61E, G62T, K63G, K73R, K74N, L76M, E86G, G87E, K90D, G92E, E94D, N108H, T119L, A127T, V147I, A160D, A166T, T168A, E172G, N175D, P176Y, I178V, E179D, D180E, R186K, Y203I, A206S, I212L, S215R, S241R, M247V, M267T, P272S, I273T, I282V, A292S, I294V, A330S, K333E, E335I, S346T, Y348F, E349D, F354Y, N378S, R381K, I399L, N400T, K418R, E420G, M447I, L451P, K466A, K467Q, N469D, I473V, Y474F, M475S, E477D, N499Y, E510G, E517Q, Y523F, A529Q, A547S, E553A, K556S, T558K, R561E, D565T, K584R, R588K, R594K, T600V, S602A, L605M, E609D, A615S; NS4A: L6I, M7L, G11A, R12S, T18S, H19S, R22K, N23L, L28I, K42Q, T51S, F55L, L58V, A62G, G66A, L72F, *74Q, M81L, C87A, M89A, A90V, M97I, H103Q; NS4B: L6I, K11T, L13F, L15F, G16Y, N17Q, T19K, I22T, N23T, I45L, S56T, V60L, T63A, S82H, K83R, I86L, I102T, A107S, L109V, L110M, V112L, A113V, D153E, P156S, A176G, L187F, A190V, S199L, K208R, M218T, 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"AGTTGTTAGTCTGTGTGGACCGACAAGGACAGTTCCAAATCGGAAGCTTGCTTAACACAGTTCTAACAGTTTGTTTGAATAGAGAGCAGATCTCTGGAAAAATGAACCAACGAAAAAAGGTGGTTAGACCACCTTTCAATATGCTGAAACGCGAGAGAAACCGCGTATCAACCCCTCAAGGGTTGGTGAAGAGATTCTCAACCGGACTTTTTTCTGGGAAAGGACCCTTACGGATGGTGCTAGCATTCATCACGTTTTTGCGAGTCCTTTCCATCCCACCAACAGCAGGGATTCTGAAGAGATGGGGACAGTTGAAGAAAAATAAGGCCATCAAGATACTGATTGGATTCAGGAAGGAGATAGGCCGCATGCTGAACATCTTGAACGGGAGAAAAAGGTCAACGATAACATTGCTGTGCTTGATTCCCACCGTAATGGCGTTTTCCCTCAGCACAAGAGATGGCGAACCCCTCATGATAGTGGCAAAACATGAAAGGGGGAGACCTCTCTTGTTTAAGACAACAGAGGGGATCAACAAATGCACTCTCATTGCCATGGACTTGGGTGAAATGTGTGAGGACACTGTCACGTATAAATGCCCCCTACTGGTCAATACCGAACCTGAAGACATTGATTGCTGGTGCAACCTCACGTCTACCTGGGTCATGTATGGGACATGCACCCAGAGCGGAGAACGGAGACGAGAGAAGCGCTCAGTAGCTTTAACACCACATTCAGGAATGGGATTGGAAACAAGAGCTGAGACATGGATGTCATCGGAAGGGGCTTGGAAGCATGCTCAGAGAGTAGAGAGCTGGATACTCAGAAACCCAGGATTCGCGCTCTTGGCAGGATTTATGGCTTATATGATTGGGCAAACAGGAATCCAGCGAACTGTCTTCTTTGTCCTAATGATGCTGGTCGCCCCATCCTACGGAATGCGATGCGTAGGAGTAGGAAACAGAGACTTTGTGGAAGGAGTCTCAGGTGGAGCATGGGTCGACCTGGTGCTAGAACATGGAGGATGCGTCACAACCATGGCCCAGGGAAAACCAACCTTGGATTTTGAACTGACTAAGACAACAGCCAAGGAAGTGGCTCTGTTAAGAACCTATTGCATTGAAGCCTCAATATCAAACATAACTACGGCAACAAGATGTCCAACGCAAGGAGAGCCTTATCTGAAAGAGGAACAGGACCAACAGTACATTTGCCGGAGAGATGTGGTAGACAGAGGGTGGGGCAATGGCTGTGGCTTGTTTGGAAAAGGAGGAGTTGTGACATGTGCGAAGTTTTCATGTTCGGGGAAGATAACAGGCAATTTGGTCCAAATTGAGAACCTTGAATACACAGTGGTTGTAACAGTCCACAATGGAGACACCCATGCAGTAGGAAATGACACATCCAATCATGGAGTTACAGCCATGATAACTCCCAGGTCACCATCGGTGGAAGTCAAATTGCCGGACTATGGAGAACTAACACTCGATTGTGAACCCAGGTCTGGAATTGACTTTAATGAGATGATTCTGATGAAAATGAAAAAGAAAACATGGCTCGTGCATAAGCAATGGTTTTTGGATCTGCCTCTTCCATGGACAGCAGGAGCAGACACATCAGAGGTTCACTGGAATTACAAAGAGAGAATGGTGACATTTAAGGTTCCTCATGCCAAGAGACAGGATGTGACAGTGCTGGGATCTCAGGAAGGAGCCATGCATTCTGCCCTCGCTGGAGCCACAGAAGTGGACTCCGGTGATGGAAATCACATGTTTGCAGGACATCTTAAGTGCAAAGTCCGTATGGAGAAATTGAGAATCAAGGGAATGTCATACACGATGTGTTCAGGAAAGTTTTCAATTGACAAAGAGATGGCAGAAACACAGCATGGGACAACAGTGGTGAAAGTCAAGTATGAAGGTGCTGGAGCTCCGTGTAAAGTCCCCATAGAGATAAGAGATGTAAACAAGGAAAAAGTGGTTGGGCGTATCATCTCATCCACCCCTTTGGCTGAGAATACCAACAGTGTAACCAACATAGAATTAGAACCCCCCTTTGGGGACAGCTACATAGTGATAGGTGTTGGAAACAGCGCATTAACACTCCATTGGTTCAGGAAAGGGAGTTCCATTGGCAAGATGTTTGAGTCCACATACAGAGGTGCAAAACGAATGGCCATTCTAGGTGAAACAGCTTGGGATTTTGGTTCCGTTGGTGGACTGTTCACATCATTGGGAAAGGCTGTGCACCAGGTTTTTGGAAGTGTGTATACAACCATGTTTGGAGGAGTCTCATGGATGATTAGAATCCTAATTGGGTTCTTAGTGTTGTGGATTGGCACGAACTCGAGGAACACTTCAATGGCTATGACGTGCATAGCTGTTGGAGGAATCACTCTGTTTCTGGGCTTCACAGTTCAAGCAGACATGGGTTGTGTGGCGTCATGGAGTGGGAAAGAATTGAAGTGTGGAAGCGGAATTTTTGTGGTTGACAACGTGCACACTTGGACAGAACAGTACAAATTTCAACCAGAGTCCCCAGCGAGACTAGCGTCTGCAATATTAAATGCCCACAAAGATGGGGTCTGTGGAATTAGATCAACCACGAGGCTGGAAAATGTCATGTGGAAGCAAATAACCAACGAGCTAAACTATGTTCTCTGGGAAGGAGGACATGACCTCACTGTAGTGGCTGGGGATGTGAAGGGGGTGTTGACCAAAGGCAAGAGAGCACTCACACCCCCAGTGAGTGATCTGAAATATTCATGGAAGACATGGGGAAAAGCAAAAATCTTCACCCCAGAAGCAAGAAATAGCACATTTTTAATAGACGGACCAGACACCTCTGAATGCCCCAATGAACGAAGAGCATGGAACTCTCTTGAGGTGGAAGACTATGGATTTGGCATGTTCACGACCAACATATGGATGAAATTCCGAGAAGGAAGTTCAGAAGTGTGTGACCACAGGTTAATGTCAGCTGCAATTAAAGATCAGAAAGCTGTGCATGCTGACATGGGTTATTGGATAGAGAGCTCAAAAAACCAGACCTGGCAGATAGAGAAAGCATCTCTTATTGAAGTGAAAACATGTCTGTGGCCCAAGACCCACACACTGTGGAGCAATGGAGTGCTGGAAAGCCAGATGCTCATTCCAAAATCATATGCGGGCCCTTTTTCACAGCACAATTACCGCCAGGGCTATGCCACGCAAACCGTGGGCCCATGGCACTTAGGCAAATTAGAGATAGACTTTGGAGAATGCCCCGGAACAACAGTCACAATTCAGGAGGATTGTGACCATAGAGGCCCATCTTTGAGGACCACCACTGCATCTGGAAAACTAGTCACGCAATGGTGCTGCCGCTCCTGCACGATGCCTCCCTTAAGGTTCTTGGGAGAAGATGGGTGCTGGTATGGGATGGAGATTAGGCCCTTGAGTGAAAAAGAAGAGAACATGGTCAAATCACAGGTGACGGCCGGACAGGGCACATCAGAAACTTTTTCTATGGGTCTGTTGTGCCTGACCTTGTTTGTGGAAGAATGCTTGAGGAGAAGAGTCACTAGGAAACACATGATATTAGTTGTGGTGATCACTCTTTGTGCTATCATCCTGGGAGGCCTCACATGGATGGACTTACTACGAGCCCTCATCATGTTGGGGGACACTATGTCTGGTAGAATAGGAGGACAGATCCACCTAGCCATCATGGCAGTGTTCAAGATGTCACCAGGATACGTGCTGGGTGTGTTTTTAAGGAAACTCACTTCAAGAGAGACAGCACTAATGGTAATAGGAATGGCCATGACAACGGTGCTTTCAATTCCACATGACCTTATGGAACTCATTGATGGAATATCACTGGGACTAATTTTGCTAAAAATAGTAACACAGTTTGACAACACCCAAGTGGGAACCTTAGCTCTTTCCTTGACTTTCATAAGATCAACAATGCCATTGGTCATGGCTTGGAGGACCATTATGGCTGTGTTGTTTGTGGTCACACTCATTCCTTTGTGCAGGACAAGCTGTCTTCAAAAACAGTCTCATTGGGTAGAAATAACAGCACTCATCCTAGGAGCCCAAGCTCTGCCAGTGTACCTAATGACTCTTATGAAAGGAGCCTCAAGAAGATCTTGGCCTCTTAACGAGGGCATAATGGCTGTGGGTTTGGTTAGTCTCTTAGGAAGCGCTCTTTTAAAGAATGATGTCCCTTTAGCTGGCCCAATGGTGGCAGGAGGCTTACTTCTGGCGGCTTACGTGATGAGTGGTAGCTCAGCAGATCTGTCACTAGAGAAGGCCGCCAACGTGCAGTGGGATGAAATGGCAGACATAACAGGCTCAAGCCCAATCGTAGAAGTGAAGCAGGATGAAGATGGCTCTTTCTCCATACGGGACGTCGAGGAAACCAATATGATAACCCTTTTGGTGAAACTGGCACTGATAACAGTGTCAGGTCTCTACCCCTTGGCAATTCCAGTCACAATGACCTTATGGTACATGTGGCAAGTGAAAACACAAAGATCAGGAGCCCTGTGGGACGTCCCCTCACCCGCTGCCACTAAAAAAGCCGCACTGTCTGAAGGAGTGTACAGGATCATGCAAAGAGGGTTATTCGGGAAAACTCAGGTTGGAGTAGGGATACACATGGAAGGTGTATTTCACACAATGTGGCATGTAACAAGAGGATCAGTGATCTGCCACGAGACTGGGAGATTGGAGCCATCTTGGGCTGACGTCAGGAATGACATGATATCATACGGTGGGGGATGGAGGCTTGGAGACAAATGGGACAAAGAAGAAGACGTTCAGGTCCTCGCCATAGAACCAGGAAAAAATCCTAAACATGTCCAAACGAAACCTGGCCTTTTCAAGACCCTAACTGGAGAAATTGGAGCAGTAACATTAGATTTCAAACCCGGAACGTCTGGTTCTCCCATCATCAACAGGAAAGGAAAAGTCATCGGACTCTATGGAAATGGAGTAGTTACCAAATCAGGTGATTACGTCAGTGCCATAACGCAAGCCGAAAGAATTGGAGAGCCAGATTATGAAGTGGATGAGGACATTTTTCGAAAGAAAAGATTAACTATAATGGACTTACACCCCGGAGCTGGAAAGACAAAAAGAATTCTTCCATCAATAGTGAGAGAAGCCTTAAAAAGGAGGCTACGAACTTTGATTTTAGCTCCCACGAGAGTGGTGGCGGCCGAGATGGAAGAGGCCCTACGTGGACTGCCAATCCGTTATCAGACCCCAGCTGTGAAATCAGAACACACAGGAAGAGAGATTGTAGACCTCATGTGTCATGCAACCTTCACAACAAGACTTTTGTCATCAACCAGGGTTCCAAATTACAACCTTATAGTGATGGATGAAGCACATTTCACCGATCCTTCTAGTGTCGCGGCTAGAGGATACATCTCGACCAGGGTGGAAATGGGAGAGGCAGCAGCCATCTTCATGACCGCAACCCCTCCCGGAGCGACAGATCCCTTTCCCCAGAGCAACAGCCCAATAGAAGACATCGAGAGGGAAATTCCGGAAAGGTCATGGAACACAGGGTTCGACTGGATAACAGACTACCAAGGGAAAACTGTGTGGTTTGTTCCCAGCATAAAAGCTGGAAATGACATTGCAAATTGTTTGAGAAAGTCGGGAAAGAAAGTTATCCAGTTGAGTAGGAAAACCTTTGATACAGAGTATCCAAAAACGAAACTCACGGACTGGGACTTTGTGGTCACTACAGACATATCTGAAATGGGGGCCAATTTTAGAGCCGGGAGAGTGATAGACCCTAGAAGATGCCTCAAGCCAGTTATCCTACCAGATGGGCCAGAGAGAGTCATTTTAGCAGGTCCTATTCCAGTGACTCCAGCAAGCGCTGCTCAGAGAAGAGGGCGAATAGGAAGGAACCCAGCACAAGAAGACGACCAATACGTTTTCTCCGGAGACCCACTAAAAAATGATGAAGATCATGCCCACTGGACAGAAGCAAAGATGCTGCTTGACAATATCTACACCCCAGAAGGGATCATTCCAACATTGTTTGGTCCGGAAAGGGAAAAAACCCAAGCCATTGATGGAGAGTTTCGCCTCAGAGGGGAACAAAGGAAGACTTTTGTGGAATTAATGAGGAGAGGAGACCTTCCGGTGTGGCTGAGCTATAAGGTAGCTTCTGCTGGCATTTCTTACGAAGATCGGGAATGGTGCTTCACAGGGGAAAGAAATAACCAAATTTTAGAAGAAAACATGGAGGTTGAAATTTGGACTAGAGAGGGAGAAAAGAAAAAGCTAAGGCCAAGATGGTTAGATGCACGTGTATACGCTGACCCCATGGCTTTGAAGGATTTCAAGGAGTTTGCCAGTGGAAGGAAGAGTATAACTCTCGACATCCTAACAGAGATTGCCAGTTTGCCAACTTACCTTTCCTCTAGGGCCAAGCTCGCCCTTGATAACATAGTCATGCTCCACACAACAGAAAGAGGAGGGAGGGCCTATCAACACGCCCTGAACGAACTTCCGGAGTCACTGGAAACACTCATGCTTGTAGCTTTACTAGGTGCTATGACAGCAGGCATCTTCCTGTTTTTCATGCAAGGGAAAGGAATAGGGAAATTGTCAATGGGTTTGATAACCATTGCGGTGGCTAGTGGCTTGCTCTGGGTAGCAGAAATTCAACCCCAGTGGATAGCGGCCTCAATCATACTAGAGTTTTTTCTCATGGTACTGTTGATACCGGAACCAGAAAAACAAAGGACCCCACAAGACAATCAATTGATCTACGTCATATTGACCATTCTCACCATCATTGGTCTAATAGCAGCCAACGAGATGGGGCTGATTGAAAAAACAAAAACGGATTTTGGGTTTTACCAGGTAAAAACAGAAACCACCATCCTCGATGTGGACTTGAGACCAGCTTCAGCATGGACGCTCTATGCAGTAGCCACCACAATTCTGACTCCCATGCTGAGACACACCATAGAAAACACGTCGGCCAACCTATCTCTAGCAGCCATTGCCAACCAGGCAGCCGTCCTAATGGGGCTTGGAAAAGGATGGCCGCTCCACAGAATGGACCTCGGTGTGCCGCTGTTAGCAATGGGATGCTATTCTCAAGTGAACCCAACAACCTTGACAGCATCCTTAGTCATGCTTTTAGTCCATTATGCAATAATAGGCCCAGGATTGCAGGCAAAAGCCACAAGAGAGGCCCAGAAAAGGACAGCTGCTGGGATCATGAAAAATCCCACAGTGGACGGGATAACAGTAATAGATCTAGAACCAATATCCTATGACCCAAAATTTGAAAAGCAATTAGGGCAGGTCATGCTACTAGTCTTGTGTGCTGGACAACTACTCTTGATGAGAACAACATGGGCTTTCTGTGAAGTCTTGACTTTGGCCACAGGACCAATCTTGACCTTGTGGGAGGGCAACCCGGGAAGGTTTTGGAACACGACCATAGCCGTATCCACCGCCAACATTTTCAGGGGAAGTTACTTGGCGGGAGCTGGACTGGCTTTTTCACTCATAAAGAATGCACAAACCCCTAGGAGGGGAACTGGGACCACAGGAGAGACACTGGGAGAGAAGTGGAAGAGACAGCTAAACTCATTAGACAGAAAAGAGTTTGAAGAGTATAAAAGAAGTGGAATACTAGAAGTGGACAGGACTGAAGCCAAGTCTGCCCTGAAAGATGGGTCTAAAATCAAGCATGCAGTATCAAGAGGGTCCAGTAAGATCAGATGGATTGTTGAGAGAGGGATGGTAAAGCCAAAAGGGAAAGTTGTAGATCTTGGCTGTGGGAGAGGAGGATGGTCTTATTACATGGCGACACTCAAGAACGTGACTGAAGTGAAAGGGTATACAAAAGGAGGTCCAGGACATGAAGAACCGATTCCCATGGCTACTTATGGTTGGAATTTGGTCAAACTCCATTCAGGGGTTGACGTGTTCTACAAACCCACAGAGCAAGTGGACACCCTGCTCTGTGATATTGGGGAGTCATCTTCTAATCCAACAATAGAGGAAGGAAGAACATTAAGAGTTTTGAAGATGGTGGAGCCATGGCTCTCTTCAAAACCTGAATTCTGCATCAAAGTCCTTAACCCCTACATGCCAACAGTCATAGAAGAGCTGGAGAAACTGCAGAGAAAACATGGTGGGAACCTTGTCAGATGCCCGCTGTCCAGGAACTCCACCCATGAGATGTATTGGGTGTCAGGAGCGTCGGGAAACATTGTGAGCTCTGTGAACACAACATCAAAGATGTTGTTGAACAGGTTCACAACAAGGCATAGGAAACCCACTTATGAGAAGGACGTAGATCTTGGGGCAGGAACGAGAAGTGTCTCCACTGAAACAGAAAAACCAGACATGACAATCATTGGGAGAAGGCTTCAGCGATTGCAAGAAGAGCACAAAGAAACCTGGCATTATGATCAGGAAAACCCATACAGAACCTGGGCGTATCATGGAAGCTATGAAGCTCCTTCGACAGGCTCTGCATCCTCCATGGTGAACGGGGTGGTAAAACTGCTAACAAAACCCTGGGATGTGATTCCAATGGTGACTCAGTTAGCCATGACAGATACAACCCCTTTTGGGCAACAAAGAGTGTTCAAAGAGAAGGTGGATACCAGAACACCACAACCAAAACCCGGTACACGAATGGTTATGACCACGACAGCCAATTGGCTGTGGGCCCTCCTTGGAAAGAAGAAAAATCCCAGACTGTGCACAAGGGAAGAGTTCATCTCAAAAGTTAGATCAAACGCAGCCATAGGCGCAGTCTTTCAGGAAGAACAGGGATGGACATCAGCCAGTGAAGCTGTGAATGACAGCCGGTTTTGGGAACTGGTTGACAAAGAAAGGGCCCTACACCAGGAAGGGAAATGTGAATCGTGTGTCTATAACATGATGGGAAAACGTGAGAAAAAGTTAGGAGAGTTTGGCAGAGCCAAGGGAAGCCGAGCAATCTGGTACATGTGGCTGGGAGCGCGGTTTCTGGAATTTGAAGCCCTGGGTTTTTTGAATGAAGATCACTGGTTTGGCAGAGAAAATTCATGGAGTGGAGTGGAAGGGGAAGGTCTGCACAGATTGGGATATATCCTGGAGGAGATAGACAAGAAGGATGGAGACCTAATGTATGCTGATGACACAGCAGGCTGGGACACAAGAATCACTGAGGATGACCTTCAAAATGAGGAACTGATCACGGAACAGATGGCTCCCCACCACAAGATCCTAGCCAAAGCCATTTTCAAACTAACCTATCAAAACAAAGTGGTGAAAGTCCTCAGACCCACACCGCGGGGAGCGGTGATGGATATCATATCCAGGAAAGACCAAAGAGGTAGTGGACAAGTTGGAACATATGGTTTGAACACATTCACCAACATGGAAGTTCAACTCATCCGCCAAATGGAAGCTGAAGGAGTCATCACACAAGATGACATGCAGAACCCAAAAGGGTTGAAAGAAAGAGTTGAGAAATGGCTGAAAGAGTGTGGTGTCGACAGGTTAAAGAGGATGGCAATCAGTGGAGACGATTGCGTGGTGAAGCCCCTAGATGAGAGGTTTGGCACTTCCCTCCTCTTCTTGAACGACATGGGAAAGGTGAGGAAAGACATTCCGCAGTGGGAACCATCTAAGGGATGGAAAAACTGGCAAGAGGTTCCTTTTTGCTCCCACCACTTTCACAAGATCTTTATGAAGGATGGCCGCTCACTAGTTGTTCCATGTAGAAACCAGGATGAACTGATAGGGAGAGCCAGAATCTCGCAGGGAGCTGGATGGAGCTTAAGAGAAACAGCCTGCCTGGGCAAAGCTTACGCCCAGATGTGGTCGCTTATGTACTTCCACAGAAGGGATCTGCGTTTAGCCTCCATGGCCATATGCTCAGCAGTTCCAACGGAATGGTTTCCAACAAGCAGAACAACATGGTCAATCCACGCTCATCACCAGTGGATGACCACTGAAGATATGCTCAAAGTGTGGAACAGAGTGTGGATAGAAGACAACCCTAATATGACTGACAAGACTCCAGTCCATTCGTGGGAAGATATACCTTACCTAGGGAAAAGAGAGGATTTGTGGTGTGGATCCCTGATTGGACTTTCTTCCAGAGCCACCTGGGCGAAGAACATTCATACGGCCATAACCCAGGTCAGGAACCTGATCGGAAAAGAGGAATACGTGGATTACATGCCAGTAATGAAAAGATACAGTGCTCCTTCAGAGAGTGAAGGAGTTCTGTAATTACCAACAACAAACACCAAAGGCTATTGAAGTCAGGCCACTTGTGCCACGGTTTGAGCAAACCGTGCTGCCTGTAGCTCCGCCAATAATGGGAGGCGTAATAATCCCCAGGGAGGCCATGCGCCACGGAAGCTGTACGCGTGGCATATTGGACTAGCGGTTAGAGGAGACCCCTCCCATCACTGATAAAACGCAGCAAAAGGGGGCCCGAAGCCAGGAGGAAGCTGTACTCCTGGTGGAAGGACTAGAGGTTAGAGGAGACCCCCCCAACACAAAAACAGCATATTGACGCTGGGAAAGACCAGAGATCCTGCTGTCTCTGCAACATCAATCCAGGCACAGAGCGCCGCAAGATGGATTGGTGTTGTTGATCCAACAGGTTCT", "2K": "TPQDNQLIYVILTILTIIGLIAA", "C": "MNQRKKVVRPPFNMLKRERNRVSTPQGLVKRFSTGLFSGKGPLRMVLAFITFLRVLSIPPTAGILKRWGQLKKNKAIKILIGFRKEIGRMLNILNGRKRSTITLLCLIPTVMA", "E": "MRCVGVGNRDFVEGVSGGAWVDLVLEHGGCVTTMAQGKPTLDFELTKTTAKEVALLRTYCIEASISNITTATRCPTQGEPYLKEEQDQQYICRRDVVDRGWGNGCGLFGKGGVVTCAKFSCSGKITGNLVQIENLEYTVVVTVHNGDTHAVGNDTSNHGVTAMITPRSPSVEVKLPDYGELTLDCEPRSGIDFNEMILMKMKKKTWLVHKQWFLDLPLPWTAGADTSEVHWNYKERMVTFKVPHAKRQDVTVLGSQEGAMHSALAGATEVDSGDGNHMFAGHLKCKVRMEKLRIKGMSYTMCSGKFSIDKEMAETQHGTTVVKVKYEGAGAPCKVPIEIRDVNKEKVVGRIISSTPLAENTNSVTNIELEPPFGDSYIVIGVGNSALTLHWFRKGSSIGKMFESTYRGAKRMAILGETAWDFGSVGGLFTSLGKAVHQVFGSVYTTMFGGVSWMIRILIGFLVLWIGTNSRNTSMAMTCIAVGGITLFLGFTVQA", "M": "FSLSTRDGEPLMIVAKHERGRPLLFKTTEGINKCTLIAMDLGEMCEDTVTYKCPLLVNTEPEDIDCWCNLTSTWVMYGTCTQSGERRREKRSVALTPHSGMGLETRAETWMSSEGAWKHAQRVESWILRNPGFALLAGFMAYMIGQTGIQRTVFFVLMMLVAPSYG", "NS1": "DMGCVASWSGKELKCGSGIFVVDNVHTWTEQYKFQPESPARLASAILNAHKDGVCGIRSTTRLENVMWKQITNELNYVLWEGGHDLTVVAGDVKGVLTKGKRALTPPVSDLKYSWKTWGKAKIFTPEARNSTFLIDGPDTSECPNERRAWNSLEVEDYGFGMFTTNIWMKFREGSSEVCDHRLMSAAIKDQKAVHADMGYWIESSKNQTWQIEKASLIEVKTCLWPKTHTLWSNGVLESQMLIPKSYAGPFSQHNYRQGYATQTVGPWHLGKLEIDFGECPGTTVTIQEDCDHRGPSLRTTTASGKLVTQWCCRSCTMPPLRFLGEDGCWYGMEIRPLSEKEENMVKSQVTA", "NS2A": "GQGTSETFSMGLLCLTLFVEECLRRRVTRKHMILVVVITLCAIILGGLTWMDLLRALIMLGDTMSGRIGGQIHLAIMAVFKMSPGYVLGVFLRKLTSRETALMVIGMAMTTVLSIPHDLMELIDGISLGLILLKIVTQFDNTQVGTLALSLTFIRSTMPLVMAWRTIMAVLFVVTLIPLCRTSCLQKQSHWVEITALILGAQALPVYLMTLMKGASRR", "NS2B": "SWPLNEGIMAVGLVSLLGSALLKNDVPLAGPMVAGGLLLAAYVMSGSSADLSLEKAANVQWDEMADITGSSPIVEVKQDEDGSFSIRDVEETNMITLLVKLALITVSGLYPLAIPVTMTLWYMWQVKTQR", "NS3": "SGALWDVPSPAATKKAALSEGVYRIMQRGLFGKTQVGVGIHMEGVFHTMWHVTRGSVICHETGRLEPSWADVRNDMISYGGGWRLGDKWDKEEDVQVLAIEPGKNPKHVQTKPGLFKTLTGEIGAVTLDFKPGTSGSPIINRKGKVIGLYGNGVVTKSGDYVSAITQAERIGEPDYEVDEDIFRKKRLTIMDLHPGAGKTKRILPSIVREALKRRLRTLILAPTRVVAAEMEEALRGLPIRYQTPAVKSEHTGREIVDLMCHATFTTRLLSSTRVPNYNLIVMDEAHFTDPSSVAARGYISTRVEMGEAAAIFMTATPPGATDPFPQSNSPIEDIEREIPERSWNTGFDWITDYQGKTVWFVPSIKAGNDIANCLRKSGKKVIQLSRKTFDTEYPKTKLTDWDFVVTTDISEMGANFRAGRVIDPRRCLKPVILPDGPERVILAGPIPVTPASAAQRRGRIGRNPAQEDDQYVFSGDPLKNDEDHAHWTEAKMLLDNIYTPEGIIPTLFGPEREKTQAIDGEFRLRGEQRKTFVELMRRGDLPVWLSYKVASAGISYEDREWCFTGERNNQILEENMEVEIWTREGEKKKLRPRWLDARVYADPMALKDFKEFASGRK", "NS4A": "SITLDILTEIASLPTYLSSRAKLALDNIVMLHTTERGGRAYQHALNELPESLETLMLVALLGAMTAGIFLFFMQGKGIGKLSMGLITIAVASGLLWVAEIQPQWIAASIILEFFLMVLLIPEPEKQR", "NS4B": "NEMGLIEKTKTDFGFYQVKTETTILDVDLRPASAWTLYAVATTILTPMLRHTIENTSANLSLAAIANQAAVLMGLGKGWPLHRMDLGVPLLAMGCYSQVNPTTLTASLVMLLVHYAIIGPGLQAKATREAQKRTAAGIMKNPTVDGITVIDLEPISYDPKFEKQLGQVMLLVLCAGQLLLMRTTWAFCEVLTLATGPILTLWEGNPGRFWNTTIAVSTANIFRGSYLAGAGLAFSLIKNAQTPRR", "NS5": "GTGTTGETLGEKWKRQLNSLDRKEFEEYKRSGILEVDRTEAKSALKDGSKIKHAVSRGSSKIRWIVERGMVKPKGKVVDLGCGRGGWSYYMATLKNVTEVKGYTKGGPGHEEPIPMATYGWNLVKLHSGVDVFYKPTEQVDTLLCDIGESSSNPTIEEGRTLRVLKMVEPWLSSKPEFCIKVLNPYMPTVIEELEKLQRKHGGNLVRCPLSRNSTHEMYWVSGASGNIVSSVNTTSKMLLNRFTTRHRKPTYEKDVDLGAGTRSVSTETEKPDMTIIGRRLQRLQEEHKETWHYDQENPYRTWAYHGSYEAPSTGSASSMVNGVVKLLTKPWDVIPMVTQLAMTDTTPFGQQRVFKEKVDTRTPQPKPGTRMVMTTTANWLWALLGKKKNPRLCTREEFISKVRSNAAIGAVFQEEQGWTSASEAVNDSRFWELVDKERALHQEGKCESCVYNMMGKREKKLGEFGRAKGSRAIWYMWLGARFLEFEALGFLNEDHWFGRENSWSGVEGEGLHRLGYILEEIDKKDGDLMYADDTAGWDTRITEDDLQNEELITEQMAPHHKILAKAIFKLTYQNKVVKVLRPTPRGAVMDIISRKDQRGSGQVGTYGLNTFTNMEVQLIRQMEAEGVITQDDMQNPKGLKERVEKWLKECGVDRLKRMAISGDDCVVKPLDERFGTSLLFLNDMGKVRKDIPQWEPSKGWKNWQEVPFCSHHFHKIFMKDGRSLVVPCRNQDELIGRARISQGAGWSLRETACLGKAYAQMWSLMYFHRRDLRLASMAICSAVPTEWFPTSRTTWSIHAHHQWMTTEDMLKVWNRVWIEDNPNMTDKTPVHSWEDIPYLGKREDLWCGSLIGLSSRATWAKNIHTAITQVRNLIGKEEYVDYMPVMKRYSAPSESEGVL", "pr": "FSLSTRDGEPLMIVAKHERGRPLLFKTTEGINKCTLIAMDLGEMCEDTVTYKCPLLVNTEPEDIDCWCNLTSTWVMYGTCTQSGERRREKR"}} \ No newline at end of file +{"version": "v2", "meta": {"title": "Real-time tracking of dengue virus evolution", "updated": "2024-05-30", "build_url": "https://github.com/nextstrain/dengue", "maintainers": [{"name": "the Nextstrain team", "url": "https://nextstrain.org/team"}], "display_defaults": {"map_triplicate": true, "color_by": "clade_membership"}, "genome_annotations": {"nuc": {"end": 10649, "start": 1, "strand": "+", "type": "##sequence-region pragma", "seqid": "resources/all/genome_annotation.gff3"}, "2K": {"end": 6827, "seqid": "resources/all/genome_annotation.gff3", "start": 6759, "strand": "+", "type": "gene"}, "C": {"end": 440, "seqid": "resources/all/genome_annotation.gff3", "start": 102, "strand": "+", "type": "gene"}, "E": {"end": 2423, "seqid": "resources/all/genome_annotation.gff3", "start": 939, "strand": "+", "type": "gene"}, "M": {"end": 938, "seqid": 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S273G, G274D, L277H, R286K, L287V, D290E, K293R, L294I, A300T, T303S, K307S, E309D, I320T, I322V, D329A, F337I, K343N, K345E, N346K, I348V, L351I, T353S, A354S, N355T, I357F, V358A, T359E, E360N, K361T, D362N, P364V, V365T, A369L, E384D, R385S, K388T, N390H, K393R, A404S, A406Y, D417E, V428L, V432L, T442S, G445T, A446T, S449G, T454M, M455I, K456R, V461I, I463V, T464L, M468T, S472N, L475M, S476A, I484G, V485I, Y488F, V491F, M492T; M: T4S, H11L, S15A, K21R, S22P, A28T, D29E, M33K, L44M, I49V, T57V, E58N, T83S, H86R, V99S, Q119H, T125S, H130N, T134A, I135L, M136L, V138G, L140M, T143M, T146Q, Y148G, V152T, I154F, I156V, L158M, M165Y, T166G; NS1: N7S, K9S, T22I, D37E, T40A, P47L, K48N, E51K, E52D, A60T, L66V, H77Y, I78V, N82G, E83G, I84H, K85D, I93V, I96V, E98T, T103A, Q107P, P108V, I109N, E110D, L124F, A126P, V128A, Q129R, P141S, D146E, Q147R, I162M, L169M, L171F, E174G, Y175S, T176S, N191Q, A205S, E208Q, K211Q, F217L, S228T, E240Q, I242L, I246T, F247Y, I251F, P258Q, Y261A, A265V, D278G, F279E, E281P, V286T, V287I, T288Q, N293H, I308V, E310Q, L318M, Y323F, I324L, N339S, L345M, L349Q, T351A; NS2A: H2Q, K4T, V5S, D6E, N7T, I10M, M15L, A16T, V22C, T25R, G28T, V38A, F40L, V41C, T42A, L43I, T45L, N47G, M48L, R51M, V56A, V60L, A62D, S65F, D66G, V71Q, T72I, Y73H, L76I, A79V, R83S, I85G, F86Y, A87V, V88L, L90V, I100T, I101A, T104V, S112H, G113D, I115V, D117H, A118D, I119L, V120M, T123I, I130L, M131I, V132L, E140D, K141N, Y142T, A146T, T147L, I148A, C153F, T159P, H161I, N162M, K165R, T168M, I169V, I170V, A172F, S175T, F177I, L181R, S184C, T189S, D190H, I192V, P193E, L196A, T197I, I199L, V201A, K202Q, P203A, M206V, F207Y, I209M, T212M, T214G, S215A, K216S; NS2B: M13L, I16L, A18G, S20A, M28L, L32M, I39L, C41A, I44M, T45S, D58N, K60Q, E62D, E64M, E66D, S68T, A70S, L75E, T77K, V78Q, E79D, T83S, M84F, K87R, E89V, E92T, T94M, L95I, I97L, I99V, T101L, L104I, V105T, F110Y, S113A, V120L, M126V, K128T; NS3: V3A, P11A, V13A, E14Q, E17T, E19T, D20E, K26M, I30L, S34T, Y41H, K42M, A56S, L58I, M59C, K61E, G62T, K63G, K73R, K74N, L76M, E86G, G87E, K90D, G92E, E94D, N108H, T119L, A127T, V147I, A160D, A166T, T168A, E172G, N175D, P176Y, I178V, E179D, D180E, Y203I, A206S, I212L, S215R, S241R, M247V, M267T, P272S, I273T, I282V, A292S, I294V, A330S, K333E, E335I, S346T, Y348F, E349D, F354Y, N378S, R381K, I399L, N400T, K418R, E420G, M447I, L451P, K466A, K467Q, N469D, I473V, Y474F, M475S, E477D, N499Y, E510G, E517Q, Y523F, A529Q, A547S, E553A, K556S, T558K, R561E, D565T, K584R, R588K, R594K, T600V, S602A, L605M, E609D, A615S; NS4A: L6I, I7L, G11A, R12S, T18S, H19S, R22K, N23L, L28I, K42Q, T51S, F55L, L58V, A62G, G66A, L72F, *74Q, R76K, M81L, C87A, M89A, A90V, M97I, H103Q; NS4B: L6I, K11T, L13F, G16Y, H17Q, A19K, I45L, S56T, V60L, T63A, S82H, K83R, I86L, I102T, A107S, L109V, L110M, V112L, A113V, D153E, P156S, A176G, L187F, A190V, I198V, S199L, K208R, M218T, I236L, M237I, G241Q, S242T, A243P; NS5: I5T, P19S, G21D, I27E, K30R, E43S, G44A, R47D, E49S, T50K, T51I, H52K, A60S, L62I, F65I, N69G, E74K, C91M, G93T, S117A, Q127H, F134Y, T135K, P137T, K139Q, C140V, P152S, V156I, N173S, N174S, N175K, T176P, Q177E, K193E, I204S, N208C, N223G, M234T, R237K, M245T, N264S, A266S, I267T, T271K, N273D, D275T, K279R, I281L, E282Q, K283R, I284L, K285Q, T290E, D297E, K301R, K312P, P313S, R326K, M341L, K365Q, K372V, K375T, I376T, E379N, R383A, K390N, M393L, T400I, K401S, T405S, M409I, T414Q, D415E, N417Q, K418G, N420T, E427N, E429S, D440A, T449S, K467R, S499G, L504W, K514R, R520E, N523D, G528D, A529L, Q548L, M552L, D555E, D558A, E560D, K563I, R579K, Q581L, T588A, R596K, A617V, G625A, F629I, P631Q, K632D, E633D, F634M, Y635N, T636P, P637K, H638G, L640K, Q645E, E646K, E649K, K650E, H651C, E654D, D673E, A676S, A678S, T680L, A681F, N702K, D703N, Q706E, E716K, L717I, I718F, T724S, S758A, R764S, A777S, N778M, H787E, F811L, T812K, W824N, E826T, *832Y, Q846L, N869T, S873N, N877K, I881V, S886A, F890Y, R891S, N892A, E893P, E894L, N896S; pr: T4S, H11L, S15A, K21R, S22P, A28T, D29E, M33K, L44M, I49V, T57V, E58N, T83S, H86R", "clade": "DENV4"}}, "children": [{"name": "NODE_0000594", "node_attrs": {"div": 2694, "serotype_genbank": {"value": "denv4", "confidence": {"denv4": 0.9999999742557142}, "entropy": 5.030512586025498e-07}, "clade_membership": {"value": "DENV4"}, "region": {"value": "Asia", "confidence": {"Asia": 0.9984138144755208}, "entropy": 0.014111733019915768}, "genotype_nextclade": {"value": "DENV4/S", "confidence": {"DENV4/S": 0.9999933140656382}, "entropy": 9.922047809301724e-05}}, "branch_attrs": {"mutations": {"nuc": ["T124C", "T212C", "C227T", "A242T", "A308G", "G317A", "G359A", "T381C", "G389A", "A407G", "C414T", "G416A", "C419T", "T425C", "G432A", "G440A", "G449A", "A452G", "A453T", "T461C", "G482A", "A485G", "T561G", "G590A", "C617T", "A620G", "T647C", "C648T", "G653A", "C659T", "G674A", "A692G", "A704G", "A725G", "A755C", "T761A", "A767G", "A782G", "T788A", "C824T", "C830T", "C839T", "G842A", "A878G", "C887T", "G890A", "T896A", "A911C", "C918T", 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"AGTTGTTAGTCTACGTGGACCGACAAGGACAGTTTCGAATCGGAAGCTTGCTTAACGTAGTTCTAACAGTTTTTTTAATTAGAGAGCAGATCTCTGAGATGAACAACCAACGGAAAAAGGCGGGAAAACCGCCTTTCAATATGCTGAAACGCGAGAGAAACCGCGTGTCAACTGTACAACAGTTGGCGAAGAGATTCTCAATAGGATTGCTGTAAGGGCAAGGACCATTAAAATTGGTTATGGCTTTCATAGCATTCCTACGATTCCTAGCCATCCCACCAACAGCAGGGATTTTGAAAAGATGGGGAACATTCAAGAAGTCTAAGGCTATCAAGGTACTGAGAGGATTCAGGAAGGAGATCGGAAGCATGCTGAACATTTTGAACAGGAGAAAAAGAACAGCAATCATTCTCATGATGCTGATTCCAACAGTAATGGCGTTCCATTTGACCACACGAGATGGAGAGCCGCACATGATTGTGAGCAAGCATGAAAGAGGAAAATCCCTTCTGTTTAAGACAGCGGATGGAATCAACATGTGCACCCTCATTGCCATGGATCTGGGTGAGTTGTGTGAGGACACAATCACGTACAAATGCCCCCTTCTCACCGAAACCGAACCAGAAGACATTGACTGCTGGTGCAATCCCACGTCCACATGGGTGACCTATGGGACGTGTACCCAAACTGGAGAACACAGACGAGAGAAAAGATCAGTGGCACTAGCCCCACATGTGGGAATGGGACTGGAAACAAGAACTGAAACATGGATGTCATCAGAAGGAGCTTGGAAACAAGCCCAGAGAGTAGAGACTTGGATTCTGAGACACCCAGGATTCACGATAATGGCAGTATTTCTGGCATACACCATAGGAACAACATATATCCAGAGAGTCGTTATTTTTATCCTACTGATGCTGGTCGCCCCATCCATGACAATGCGATGCGTGGGAGTAGGAAACAGAGACTTTGTGGAAGGAGTTTCAGGAGGAACGTGGGTTGACGTGGTGCTAGAACATGGAAGTTGTGTCACAACCATGGCAAAGAACAAACCAACACTGGACTTTGAACTGATGAAGACAGAAGCCAAACAACCGGCCACACTAAGGAAATTCTGCATTGAAGCTAAAATAACCAACACAACAACAGAATCAAGATGTCCAACACAAGGGGAACCCAATCTAGTAGAGGAGCAGGACCAGAAGTTCGTCTGCAAACAAACGATGGTGGACAGAGGATGGGGCAATGGCTGTGGTTTGTTTGGAAAAGGAGGCATTGTGACATGTGCGAAGTTTACATGCTTGAAGAAAATAGAAGGAAAAGTGGTGCAACCTGAAAACTTAGAATACACCGTGGTCATAACAGTCCACACAGGAGACGAACACGCAGTGGGAAATGACACAACAAAACATGGAATGACGGCCAAGATAACACCCCAGGCTTCCACCGCAGAAGCTAAACTGACAGACTATGGAACTCTCACGCTGGATTGCTCACCAAGAACAGGTCTCGACTTTAATGAGATGGTCTTGTTGAAAATGAAAAACAAAGCATGGCTTGTACACAGACAATGGTTCCTAGACCTACCTCTACCATGGACATCAGGAGCTGACACATAAGAAGCAAATTGGAACCAGAAAGAGATGCTGGTGACATTCAAAAATCCTCATGCAAAGAAACAGGATGTAGTCGTCCTAGGATCCCAAGAAGGAGCCATGCACACAGCACTCACAGGAGCTACAGAAATCCAAACGTCAGGAGGAAACTTAATGTTTGCAGGACACCTGAAGTGCAGACTGAGAATGGACAAACTGAAACTCAAAGGGATGTCATACGCGATGTGCACAGGAAAGTTCAAAATTGAGAAAGAAATGGCAGAAACACAGCATGGAACAATAGTCATTAAGGTTAAGTATGAAGGAGATGGTGCACCATGCAAGATCCCTTTTGAGATAAAGGATGTGAAAAAGAAAAATGTCATTGGGCGACTGATCACAGCCAACCCAATAGTCACAGAGAAAGACAGTCCAGTCAACATTGAAGCAGAACCTCCTTTTGGGGACAGCTACATCGTGATAGGAGTAGGAGAAAGAGCATTGAAACTCAACTGGTTCAAGAAAGGAAGCTCCATTGGGAAAATGTTTGAGGCAACTGCCAGAGGAGCAAAAAGAATGGCCATCTTGGGAGACACAGCCTGGGATTTTGGATCTGTAGGAGGAGTGTTCACATCAGTAGGAAAGGCGGTGCACCAGGTTTTTGGAACTGTCTATGGGGCTATGTTTAGCGGAGTCTCATGGACCATGAAAATCCTAATAGGGGTTCTCATAACATGGATAGGAATGAATTCAAGAAGCACTTCCCTGTCAATGACATGCATAGCAGTAGGAATCGTCACACTGTACCTGGGAGTCATGGTGCAGGCGGACATGGGTTGTGTTGTGAACTGGAAAGGCAAAGAACTGAAATGTGGAAGTGGAATTTTTGTCACTGACAACGTGCACACTTGGACAGAACAATACAAATTCCAACCAGACTCCCCAACAAGACTGGCGTCAGCCATTCCGAAAGCTCATGAGGAGGGAGTCTGTGGAATCCGATCAGCAACAAGACTGGAGAATCTCATGTGGAAGCAAATAACAAATGAATTGAACCACATCCTATGGGAAAATGAAATCAAACTAACTGTAGTGGCAGGAGACATTAAAGGAATCTTGGAGAAAGGGAAAAGAACACTTACACCTCAACCCATTGAGCTGAAATATTCATGGAAAACATGGGGAAAAGCAAAAATACTCACAGCAGAAGTACAAAATAACACCTTCCTCATAGACGGTCCAGACACACCAGAATGCCCTAATGACCAAAGAGCATGGAATTTTCTGGAAGTTGAGGACTATGGATTTGGAATCTTCACGACCAACATATGGCTGAAATTGCGAGAAGAGTACACCGAAGTGTGTGACCACAGGCTAATGTCAGCAGCCATCAAGGACAACAGGGCCGTCCATGCTGACATGGGCTATTGGATAGAAAGCGCAAAGAATGAGACCTGGAAGATAGAGAAAGCATCCTTCATTGAAGTTAAAACCTGCCTCTGGCCAAAATCACACACTCTTTGGAGCAATGGAGTGCTAGAAAGTGAAATGATAATTCCAAAGATTTTTGCTGGACCAATTTCACAGCACAACTACAGACCAGGCTATTACACACAAACAGCAGGACCATGGCACTTAGGCAAATTGGAGATGGACTTTGATTTTTGTGAAGGAACCACAGTTGTAGTGACTGAGGACTGTGGAAATAGAGGCCCATCTTTGAGAACAACCACAGCCTCAGGAAAACTGATAACTGAATGGTGCTGCCGATCTTGCACATTACCTCCCCTAAGATACATAGGAGAGGATGGATGCTGGTATGGGATGGAAATCAGACCCTTGAATGAGAAAGAAGAGAACCTGGTCAAGTCATTGGTCACAGCCGGGCATGGAAAGGTGGACAATTTTTCAATAGGACTCTTGTGCATGGCATTGTTCATGGAAGAGGTGCTGAGAACCAGAGTTGGCAGAAAACACATGATATTAGTAGTAGTGGTTACCTTCGTGACCCTCATCACAGGGAATATGACATGGAGAGACCTGGTAAGAGTACTTATCATGGTGGGAGCCACTATGTCTGATAGAATGGGGGGCGTGACTTACCTAGCTTTAATGGCAGCTTTCAAAATGAGACCAATCTTCGCAGTGGGATTGTTCTTGAGGAAACTGACTTCAAGAGAAATAATACTGATGACAATAGGAATGGCCCTGGTAACATCGTTCCAAATACCAGATGCCATTGTGGAACTGACTGATGGAATAGCATTGGGGATAATGGTGCTTAAAATGGTGACACATTTTGAAAAATACCAGTTGGGAGCGACCATCCTGTCCTTGACGTGCATCAAAACAACTATGACATTGCATAATGCATGGAAAACAATCACCATTATATTGGCAGTAGTTTCTCTTTTCCCATTGTGCCTGACTTCCTCCCTTCAAAAACAGACAGATTGGATACCAATAACATTGACAATCATAGGAGTCAAACCACTACCCATGTTTCTAATAACTTTAACAAAAACCAGCAAAAAAAGAAGTTGGCCTCTCAATGAGGGCATTATGGCTGTTGGAATGGTGAGCATTCTAGCAAGTTCTCTCCTAAAGAATGATGTTCCCATGGCTGGACCATTAGTGGCTGGAGGCTTGCTCATAGCGTGCTACGTGATAACTGGCAGCTCAGCAGACTTGTCACTGGAGAAAGCCGCCGATGTGAAATGGGAAGAAGAGGCAGAGATATCAGGAGCCAGCCCAATCATATTAGTCACAGTAGAAGAAGATGGTACCATGTCAATAAAGGATGAAGAGGAAGAGAACACACTAACCATACTCATAAAAACAGCACTGCTAGTAGTGTCAGGCCTCTTCCCATTGTCAATACCAGTCACAATGGCGGTATGGTACATGTGGCAAATGAAAAAACAAAGATCCGGAGTGCTGTGGGACGTCCCCTCACCCCCAGCAGTGGAAAAAGCTGAACTGGAAGATGGAGTCTATAGAATCAAGCAAAGAGGGATTTTTGGGAAATCCCAAGTTGGAGTTGGAGTATACAAAGAAGGAGTATTCCACACAATGTGGCACGTCACAAGAGGAGCTGTCCTCATGCATAAAGGGAAGAGACTGGAACCATCTTGGGCTGACGTCAAGAAAGACTTGATATCATATGGAGGAGGTTGGAGGCTTGAAGGAAAATGGAAAAAAGGAGAAGAAGTGCAGGTCTTGGCCGTAGAACCTGGGAAAAATCCAAAAAACGTCCAAACAAAACCTGGCCTTTTCAAGACCACTACAGGAGAAATAGGAGCCGTAGCCCTGGACTTCAAACCTGGAACATCAGGATCTCCCATCATTAACAAAAAAGGAAAAGTTGTGGGTCTCTATGGAAATGGAGTGGTTACAAAAAGTGGAGCCTATGTCAGTGCCATAGCGCAAACTGAAAAAATTGAAGAGCCGAATCCAGAGATTGAAGATGACATCTTTAGAAAGAAAAGATTAACCATAATGGACCTACATCCAGGAGCGGGAAAGACAAAAAGATATCTCCCAGCCATAGTCAGAGAGGCCATAAAAAGAAGCCTGAGAACTCTAATCTTGGCTCCCACAAGAGTGGTGGCAGCTGAAATGGAAGAAGCCCTAAGAGGACTCCCAATAAGTTATCAGACCCCAGCCATGAAGGCTGAACACACAGGAAGGGAGATTGTAGACCTAATGTGCCATGCCACTTTCACCATGAGACTGCTGTCACCAATCAGGGTTCCAAATTACAACCTGATAATAATGGATGAAGCACATTTCACAGACCCAGCCAGCATAGCGGCTAGAGGATACATCTCAACCCGAGTGGAAATGGGAGAGGCAGCTGCAATTTTTATGACAGCCACTCCCCCAGGAACGACAGATCCCTTTCCTCAGAGCAACGCCCCAATCAAAGATGAAGAAAGAGAAATTCCTGAACGCTCATGGAATTCAGGATATGAATGGATCACAGATTTTCAAGGGAAGACAGTGTGGTTTGTTCCAAGCATAAAAGCCGGAAATGACATAGCAAACTGCTTGAGAAAAAATGGAAAAAGGGTGATTCAACTGAGTAGGAAAACCTTTGACACAGAATATCCAAAAACAAAAATCAATGACTGGGACTTTGTGGTCACAACAGACATTTCCGAAATGGGAGCCAATTTCAAAGCTGAGAGAGTGATAGACCCAAGGAGATGCCTGAAGCCAGTTATACTGACAGATGGTCCAGAGCGGGTGATTCTGGCAGGACCCATGCCAGTGACCCTAGCAAGTGCTGCCCAAAGAAGAGGGAGAATAGGAAGGAACCCAAAAAAAGAAAATGACCAGTACATTTACATGGGAGAGCCTCTAAAAAATGATGAAGACCATGCTCACTGGACAGAAGCAAAGATGCTCCTTGACAACATCAACACACCAGAAGGGATCATCCCAACCCTGTTTGAACCAGAAAGGGAAAAGACTGAAGCCATAGACGGTGAATACCGCCTGAGAGGGGAAGCAAGGAAAACCTTTGTGGAACTAATGAGAAGAGGAGACCTACCAGTTTGGCTGGCCTACAAAGTAGCTTCAGAAGGCATCAAATACACAGACAGAAGGTGGTGCTTTGATGGAGAAAGGAACAATCAAATTTTGGAGGAGAACATGGAAGTGGAAATCTGGACAAAAGAAGGAGAAAGGAAGAAATTAAGACCTAGATGGTTGGATGCTAGAACTTATTCTGACCCACTGGCACTAAAGGAATTCAAGGAGTTTGCAGCTGGAAGAAAGTCCATAACCCTTGACCTAATAACAGAAATAGGTAGACTGCCAACTTACTTGACCCACAGGGCCAGAAATGCCCTGGACAACTTGGTCATGCTGCACACGACAGAAAAAGGAGGAAGGGCCTACAAACATGCTCTGAATGAACTACCAGAAACCCTGGAAACATTCATGCTCCTAGCTCTGTTGGCTGCGATGACAGGAGGAATCTTTCTGTTCTTGATGTAAGGAAGAGGTATAGGGAAAATGTCCATGGGACTGATCTGCATAATGGCAGCCAGCGGCCTGCTATGGATGGCAGAAATCCAGCCCCATTGGATAGCGGCCTCAATAATACTGGAGTTTTTTCTCATGGTACTGCTTATTCCAGAACCAGAAAAGCAGAGAACTCCCCAGGACAACCAATTGACCTATGTCGTGATAGCCATCCTCACAATGGTTGCAACAATAGCAGCCAATGAAATGGGATTGTTGGAAAAAACAAAGAAAGATCTTGGGTTTGGCCATGTAGCAACTGAAAATACAATTCTGGACGTAGATCTACGTCCAGCATCAGCATGGACACTCTATGCAGTGGCCACAACAATTATCACACCAATGTTGAGACACACCATAGAAAACTCCTCAGCAAATGTGTCCCTGACAGCCATTGCCAACCAGGCAGCGGTCTTGATGGGTCTTGGAAAAGGATGGCCATTATCGAAAATGGACATAGGAGTTCCACTTCTCGCCTTGGGATGCTATTCACAAGTGAACCCAATAACTCTCACAGCAGCACTACTTTTGCTAGTGGCACATTATGCCATAATAGGTCCAGGACTGCAAGCAAAAGCCACTAGAGAAGCTCAGAAAAGGACAGCAGCTGGAATCATGAAGAATCCAACGGTGGATGGGATAACAGTAATAGACCTAGATCCAATACCCTATGATCCAAAATTTGAAAAGCAGTTAGGACAAGTAATGCTCCTGGTCCTTTGTGCAGCACAGCTACTGTTGATGAGAACTACATGGGCTTTGTGTGAAGCCTTAACCCTAGCCACAGGACCAATATCAACACTGTGGGAAGGAAATCCAGGGAAATTCTGGAACACAACGATAGCTGTGTCCATGGCTAACATTTTCAGAGGGAGTTATTTGGCCGGAGCTGGACTTGCTTTTTCTATCATGAAGAATGCAGGAAGCGCAAGGAGAGGAACTGGGACCATAGGAGAAACACTGGGAGAAAAATGGAAAAGACAACTAAACCCATTGGGCAGGAAAGAATTCGAAATATACAAGAAAAGTGGAATTCTAGAAGTGGACAGAACCGAAGCCAAAGAAGGCTTGAAAAGAGGAGAAACAACCCACCATGCCGTGTCGAGAGGCTCCGCAAAACTGAGATGGTTCGTTGAGAGAAACATGGTCAAACCAGAAGGGAAAGTCGTAGACCTTGGTTGTGGAAGAGGAGGCTGGTCATATTACTGTGCGGGACTGAAGAATGTGACAGAAGTGAAAGGATACACAAAAGGAGGACCAGGACATGAAGAACCAATCCCTATGTCTACATATGGATGGAACCTAGTCAAGCTTCAGAGTGGAGTGGATGTGTTCTTCACTCCACCTGAGAAATGTGACACCCTGTTGTGTGACATTGGGGAATCATCACCAAATCCAACAGTAGAAGAAGGAAGAACATTAAGAGTTCTGAAGATGGTGGAACCATGGCTCAACAACAACACTCAATTTTGCATAAAAGTTCTCAACCCCTACATGCCAACAGTCATAGAAAAACTGGAAAAACTACAAAGGAAACATGGAGGAATCCTTGTGAGAAATCCACTCTCACGAAATTCCACCCATGAGATGTACTGGGTGTCCAATGCTTCAGGAAACATTGTGTCTTCAGTGAACATGATATCAAGAATGTTGCTGAACAGATTCACAATGAGACACAGGAAACCCACTTATGAGAAAGACGTGGACCTTGGAGCTGGAACACGAAATGTCGCAATTGAAACAGAAACACCAAACATGGATATCATTGGGAAAAGGATAGAGAAAATAAAAGAAGAGCATAAAACAACATGGCACTATGATCAGGACAATCCATACAAAACATGGGCTTACCATGGAAGCTATGAAGCCAAACCGACAGGATCAGCATCATCCATGGTGAATGGAGTGGTGAGACTGCTGACAAAACCCTGGGACGTGATTCCCATGGTGACACAGATGGCAATGACAGACACAACTCCCTTTGGACAACAGAGAGTTTTTAAAGAGAAAGTGGACACGAGAACACCAAAACCAAAACCAGGCACAAGAAAAGTTATGAAGATCACAGCCGAGTGGCTTTGGAGATTCCTTGGAAGGAAAAAAAAACCCAGAATGTGCACAAGAGAAGAGTTCACAAAAAAAGTTAGAACCAACGCAGCTATGGGCGCCGTGTTCACTGATGAGAACAAATGGAACTCAGCAAGTGAAGCTGTTGAAGACGAACGGTTTTGGGAACTGGTGGACAAAGAAAGGGATCTTCACCAAGAAGGAAAGTGTGAAACGTGTGTCTACAACATGATGGGAAAAAGAGAGAAGAAACTAGGAGAGTTTGGCAAAGCAAAAGGCAGCAGAGCAATATGGTACATGTGGCTGGGAGCACGCTTCCTAGAGTTTGAAGCCCTAGGTTTCTTGAATGAAGACCACTGGTTCTCCAGAGAAAATTCACTGAGTGGAGTGGAAGGAGAAGGACTGCACAAGCTGGGATACATCCTAAGAGACATAAACAAGAAAGAAGGAGGAGCAATGTATGCTGATGACACAGCTGGTTGGGACACAAGAATCACAGAAGATGACCTGCAGAATGAAGAAATGATCACAGACCAAATGGACCCTGAACATAAGAAATTGGCCAAGGCCATTTTCAAACTAACATACCAAAACAAGGTGGTGAGAGTCCAAAGACCAACACCAAAAGGCACGGTGATGGATATCATATCCAGGAGAGACCAAAGAGGCAGTGGACAGGTTGGAACTTATGGTCTGAACACTTTCACCAACATGGAAGCACAACTAATCAGACAAATGGAAGGTGAAGGAGTCTTTACACCAAAAGAATTCTAGACCCCACATCTGCTAGAAAAAAGAGTTCAAGAATGGTTGGAAAAACATGGAGTCGAAAGGTTAAAAAGAATGGCAATCAGTGGAGATGATTGTGTGGTGAAACCACTAGATGACAGGTTCGCCACAGCCCTAACAGCTTTGAATGACATGGGAAAGGTTAGGAAAGACATACCGCAATGGGAACCTTCAAAAGGATGGAATGATTGGCAACAAGTGCCTTTCTGCTCCCACCACTTTCATGAGCTGATCATGAAAGATGGTCGCACGCTAGTAGTTCCATGCAGAAACCAAGATGAACTGATAGGTAGAGCCAGAATCTCTCAGGGAGCTGGATGGAGCTTGAGAGAAACAGCCTGTCTGGGGAAGTCTTACGCCCAAATGTGGAGGCTGATGTACTTCCACAGAAGAGATCTGAGGCTGGCGGCCAATGCCATATGTTCAGCAGTTCCAGTACATTGGGTTCCAACAAGCAGAACAACCTGGTCGATCCATGCCCACCATCAATGGATGACAACAGAAGACATGTTTACAGTCTGGAACAGGGTGTGGATAGAGGACAACCCATGGATGGAAGACAAAACTCCAGTCTAATCTTGGGAAGACATACCATACCTAGGGAAAAGAGAAGACCAGTGGTGTGGATCCCTGATTGGCCTAACATCCAGGGCCACCTGGGCAAAGAACATTCAAACAGCCATAAACCAAGTCAGAAGCCTCATTGGGAATGAGGAGTATATAGATTACATGCCATCAATGAAAAGATTCAGGAATGAGGAGGAGAACGAAGGAGTTCTGTGGTAAACAGCAAAAGAAGTCAGGCATAAAAGAAGTCAGGCCACTAATGCCACGGCTTGAGCAAACCGTGCTGCCTGTAGCTCCACCAAAAAGGGGAGGTGTAAAAAAACCCCGGGAGGCCACAAACCATGGAAGCTGTACGCATGGTGTAGTGGACTAGCGGTTAGAGGAGACCCCTCCCATGACAGACAAAACGCAGCACAAGGGGGCCCAAAGCCAGGAGGAAGCTGTACTCTCGTTGGAAGGACTAGAGGTTAGAGGAGACCCCCCCAAAACAAAAACAGCATATTGACGCTGGGAAAGACCAGAGATCCTGCTGTCTCCTCAGCATCATTCCAGGCACAGAACGCCAGAAAATGGAATGGTGCTGTTGAATCAACAGGTTCT", "2K": "TPQDNQLTYVVIAILTMVATIAA", "C": "NNQRKKAGKPPFNMLKRERNRVSTVQQLAKRFSIGLL*GQGPLKLVMAFIAFLRFLAIPPTAGILKRWGTFKKSKAIKVLRGFRKEIGSMLNILNRRKRTAIILMMLIPTVMA", "E": "MRCVGVGNRDFVEGVSGGTWVDVVLEHGSCVTTMAKNKPTLDFELMKTEAKQPATLRKFCIEAKITNTTTESRCPTQGEPNLVEEQDQKFVCKQTMVDRGWGNGCGLFGKGGIVTCAKFTCLKKIEGKVVQPENLEYTVVITVHTGDEHAVGNDTTKHGMTAKITPQASTAEAKLTDYGTLTLDCSPRTGLDFNEMVLLKMKNKAWLVHRQWFLDLPLPWTSGADT*EANWNQKEMLVTFKNPHAKKQDVVVLGSQEGAMHTALTGATEIQTSGGNLMFAGHLKCRLRMDKLKLKGMSYAMCTGKFKIEKEMAETQHGTIVIKVKYEGDGAPCKIPFEIKDVKKKNVIGRLITANPIVTEKDSPVNIEAEPPFGDSYIVIGVGERALKLNWFKKGSSIGKMFEATARGAKRMAILGDTAWDFGSVGGVFTSVGKAVHQVFGTVYGAMFSGVSWTMKILIGVLITWIGMNSRSTSLSMTCIAVGIVTLYLGVMVQA", "M": "FHLTTRDGEPHMIVSKHERGKSLLFKTADGINMCTLIAMDLGELCEDTITYKCPLLTETEPEDIDCWCNPTSTWVTYGTCTQTGEHRREKRSVALAPHVGMGLETRTETWMSSEGAWKQAQRVETWILRHPGFTIMAVFLAYTIGTTYIQRVVIFILLMLVAPSMT", "NS1": "DMGCVVNWKGKELKCGSGIFVTDNVHTWTEQYKFQPDSPTRLASAIPKAHEEGVCGIRSATRLENLMWKQITNELNHILWENEIKLTVVAGDIKGILEKGKRTLTPQPIELKYSWKTWGKAKILTAEVQNNTFLIDGPDTPECPNDQRAWNFLEVEDYGFGIFTTNIWLKLREEYTEVCDHRLMSAAIKDNRAVHADMGYWIESAKNETWKIEKASFIEVKTCLWPKSHTLWSNGVLESEMIIPKIFAGPISQHNYRPGYYTQTAGPWHLGKLEMDFDFCEGTTVVVTEDCGNRGPSLRTTTASGKLITEWCCRSCTLPPLRYIGEDGCWYGMEIRPLNEKEENLVKSLVTA", "NS2A": "GHGKVDNFSIGLLCMALFMEEVLRTRVGRKHMILVVVVTFVTLITGNMTWRDLVRVLIMVGATMSDRMGGVTYLALMAAFKMRPIFAVGLFLRKLTSREIILMTIGMALVTSFQIPDAIVELTDGIALGIMVLKMVTHFEKYQLGATILSLTCIKTTMTLHNAWKTITIILAVVSLFPLCLTSSLQKQTDWIPITLTIIGVKPLPMFLITLTKTSKKR", "NS2B": "SWPLNEGIMAVGMVSILASSLLKNDVPMAGPLVAGGLLIACYVITGSSADLSLEKAADVKWEEEAEISGASPIILVTVEEDGTMSIKDEEEENTLTILIKTALLVVSGLFPLSIPVTMAVWYMWQMKKQR", "NS3": "SGVLWDVPSPPAVEKAELEDGVYRIKQRGIFGKSQVGVGVYKEGVFHTMWHVTRGAVLMHKGKRLEPSWADVKKDLISYGGGWRLEGKWKKGEEVQVLAVEPGKNPKNVQTKPGLFKTTTGEIGAVALDFKPGTSGSPIINKKGKVVGLYGNGVVTKSGAYVSAIAQTEKIEEPNPEIEDDIFRKKRLTIMDLHPGAGKTKRYLPAIVREAIKRSLRTLILAPTRVVAAEMEEALRGLPISYQTPAMKAEHTGREIVDLMCHATFTMRLLSPIRVPNYNLIIMDEAHFTDPASIAARGYISTRVEMGEAAAIFMTATPPGTTDPFPQSNAPIKDEEREIPERSWNSGYEWITDFQGKTVWFVPSIKAGNDIANCLRKNGKRVIQLSRKTFDTEYPKTKINDWDFVVTTDISEMGANFKAERVIDPRRCLKPVILTDGPERVILAGPMPVTLASAAQRRGRIGRNPKKENDQYIYMGEPLKNDEDHAHWTEAKMLLDNINTPEGIIPTLFEPEREKTEAIDGEYRLRGEARKTFVELMRRGDLPVWLAYKVASEGIKYTDRRWCFDGERNNQILEENMEVEIWTKEGERKKLRPRWLDARTYSDPLALKEFKEFAAGRK", "NS4A": "SITLDLITEIGRLPTYLTHRARNALDNLVMLHTTEKGGRAYKHALNELPETLETFMLLALLAAMTGGIFLFLM*GRGIGKMSMGLICIMAASGLLWMAEIQPHWIAASIILEFFLMVLLIPEPEKQR", "NS4B": "NEMGLLEKTKKDLGFGHVATENTILDVDLRPASAWTLYAVATTIITPMLRHTIENSSANVSLTAIANQAAVLMGLGKGWPLSKMDIGVPLLALGCYSQVNPITLTAALLLLVAHYAIIGPGLQAKATREAQKRTAAGIMKNPTVDGITVIDLDPIPYDPKFEKQLGQVMLLVLCAAQLLLMRTTWALCEALTLATGPISTLWEGNPGKFWNTTIAVSMANIFRGSYLAGAGLAFSIMKNAGSARR", "NS5": "GTGTIGETLGEKWKRQLNPLGRKEFEIYKKSGILEVDRTEAKEGLKRGETTHHAVSRGSAKLRWFVERNMVKPEGKVVDLGCGRGGWSYYCAGLKNVTEVKGYTKGGPGHEEPIPMSTYGWNLVKLQSGVDVFFTPPEKCDTLLCDIGESSPNPTVEEGRTLRVLKMVEPWLNNNTQFCIKVLNPYMPTVIEKLEKLQRKHGGILVRNPLSRNSTHEMYWVSNASGNIVSSVNMISRMLLNRFTMRHRKPTYEKDVDLGAGTRNVAIETETPNMDIIGKRIEKIKEEHKTTWHYDQDNPYKTWAYHGSYEAKPTGSASSMVNGVVRLLTKPWDVIPMVTQMAMTDTTPFGQQRVFKEKVDTRTPKPKPGTRKVMKITAEWLWRFLGRKKKPRMCTREEFTKKVRTNAAMGAVFTDENKWNSASEAVEDERFWELVDKERDLHQEGKCETCVYNMMGKREKKLGEFGKAKGSRAIWYMWLGARFLEFEALGFLNEDHWFSRENSLSGVEGEGLHKLGYILRDINKKEGGAMYADDTAGWDTRITEDDLQNEEMITDQMDPEHKKLAKAIFKLTYQNKVVRVQRPTPKGTVMDIISRRDQRGSGQVGTYGLNTFTNMEAQLIRQMEGEGVFTPKEF*TPHLLEKRVQEWLEKHGVERLKRMAISGDDCVVKPLDDRFATALTALNDMGKVRKDIPQWEPSKGWNDWQQVPFCSHHFHELIMKDGRTLVVPCRNQDELIGRARISQGAGWSLRETACLGKSYAQMWRLMYFHRRDLRLAANAICSAVPVHWVPTSRTTWSIHAHHQWMTTEDMFTVWNRVWIEDNPWMEDKTPV*SWEDIPYLGKREDQWCGSLIGLTSRATWAKNIQTAINQVRSLIGNEEYIDYMPSMKRFRNEEENEGVL", "pr": "FHLTTRDGEPHMIVSKHERGKSLLFKTADGINMCTLIAMDLGELCEDTITYKCPLLTETEPEDIDCWCNPTSTWVTYGTCTQTGEHRREKR"}} \ No newline at end of file