From 8aa1b6e06e3e582354f70ff287909a5762189ace Mon Sep 17 00:00:00 2001 From: Jennifer Chang Date: Fri, 19 Jan 2024 12:32:09 -0800 Subject: [PATCH] Update zika instructions --- builds/ZIKA.md | 5 ++--- 1 file changed, 2 insertions(+), 3 deletions(-) diff --git a/builds/ZIKA.md b/builds/ZIKA.md index 977b6ca..456e321 100644 --- a/builds/ZIKA.md +++ b/builds/ZIKA.md @@ -2,12 +2,11 @@ ## Ingest data from NCBI GenBank -Navigate to the nextstrain/zika repository and [follow the instructions for ingest](https://github.com/nextstrain/zika/tree/persephone/ingest). +Navigate to the nextstrain/zika repository and [follow the instructions for ingest](https://github.com/nextstrain/zika/tree/main/ingest). ``` git clone https://github.com/nextstrain/zika.git cd zika -git checkout persephone cd ingest nextstrain build . ``` @@ -37,7 +36,7 @@ This pushes files to S3 to be made available at https://data.nextstrain.org/file ## Run zika workflow -See instructions at https://github.com/nextstrain/zika/tree/persephone/phylogenetic +See instructions at https://github.com/nextstrain/zika/tree/main/phylogenetic ``` cd ../phylogenetic