From 2338d4a4a776bceff63f9a83b4b3c3a4172c0fae Mon Sep 17 00:00:00 2001
From: jordan-ort <you@example.com>
Date: Tue, 12 Nov 2024 18:31:34 -0500
Subject: [PATCH 1/2] mutation calling relative to AmWig CVV

---
 .../moncla-lab/iav-h5/ha/2.3.4.4/tree.json    | 25 ++++++++++++++++++-
 1 file changed, 24 insertions(+), 1 deletion(-)

diff --git a/data/community/moncla-lab/iav-h5/ha/2.3.4.4/tree.json b/data/community/moncla-lab/iav-h5/ha/2.3.4.4/tree.json
index a506275a..75284bb3 100644
--- a/data/community/moncla-lab/iav-h5/ha/2.3.4.4/tree.json
+++ b/data/community/moncla-lab/iav-h5/ha/2.3.4.4/tree.json
@@ -106,7 +106,30 @@
     "panels": [
       "tree",
       "entropy"
-    ]
+    ],
+    "extensions": {
+      "nextclade": {
+        "ref_nodes": {
+          "default": "__root__",
+          "search": [
+            {
+              "name": "A/American_wigeon/North_Carolina/AH0182517/2022",
+              "displayName": "A/American_wigeon/North_Carolina/AH0182517/2022",
+              "description": "Amino acid identical to A/American wigeon/South Carolina/22-000345-001/2021 CVV",
+              "criteria": [
+                {
+                  "node": [
+                    {
+                      "name": ["A/American_wigeon/North_Carolina/AH0182517/2022"]
+                    }
+                  ]
+                }
+              ]
+            }
+          ]
+        }
+      }
+    }
   },
   "tree": {
     "name": "NODE_0000000",

From ca0a868eea52108ae33336b2be9a7bc09985aa6e Mon Sep 17 00:00:00 2001
From: jordan-ort <you@example.com>
Date: Tue, 19 Nov 2024 08:57:00 -0500
Subject: [PATCH 2/2] update changelog

---
 data/community/moncla-lab/iav-h5/ha/2.3.4.4/CHANGELOG.md | 4 ++++
 1 file changed, 4 insertions(+)

diff --git a/data/community/moncla-lab/iav-h5/ha/2.3.4.4/CHANGELOG.md b/data/community/moncla-lab/iav-h5/ha/2.3.4.4/CHANGELOG.md
index d02fb79f..7678f3ca 100644
--- a/data/community/moncla-lab/iav-h5/ha/2.3.4.4/CHANGELOG.md
+++ b/data/community/moncla-lab/iav-h5/ha/2.3.4.4/CHANGELOG.md
@@ -1,3 +1,7 @@
+## Unreleased
+
+Updated tree.json to add mutation calling relative to A/American_wigeon/North_Carolina/AH0182517/2022
+
 ## 2024-05-08T11:39:52Z
 
 Initial release for Nextclade v3!