From 30b4ee2a17b1554f2815e61aee486b4ceac743df Mon Sep 17 00:00:00 2001 From: nextstrain-bot Date: Fri, 19 Apr 2024 07:50:46 +0000 Subject: [PATCH] chore: release 2024-04-19--07-50-39Z Updated datasets: - Influenza A H1N1pdm HA (nextstrain/flu/h1n1pdm/ha/CY121680) - Influenza A H1N1pdm HA (nextstrain/flu/h1n1pdm/ha/MW626062) - Influenza A H1N1pdm NA (nextstrain/flu/h1n1pdm/na/MW626056) - Influenza A H3N2 HA (nextstrain/flu/h3n2/ha/CY163680) - Influenza A H3N2 HA (nextstrain/flu/h3n2/ha/EPI1857216) - Influenza A H3N2 NA (nextstrain/flu/h3n2/na/EPI1857215) - Influenza B Victoria HA (nextstrain/flu/vic/ha/KX058884) - Influenza B Victoria NA (nextstrain/flu/vic/na/CY073894) - Mpox virus (All clades) (nextstrain/mpox/all-clades) - Mpox virus (Clade IIb) (nextstrain/mpox/clade-iib) - Mpox virus (Lineage B.1) (nextstrain/mpox/lineage-b.1) --- .../flu/h1n1pdm/ha/CY121680/CHANGELOG.md | 2 +- .../flu/h1n1pdm/ha/MW626062/CHANGELOG.md | 2 +- .../flu/h1n1pdm/na/MW626056/CHANGELOG.md | 2 +- 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2024-04-19--07-50-39Z}/README.md (100%) rename data_output/nextstrain/mpox/lineage-b.1/{unreleased => 2024-04-19--07-50-39Z}/dataset.zip (99%) rename data_output/nextstrain/mpox/lineage-b.1/{unreleased => 2024-04-19--07-50-39Z}/genome_annotation.gff3 (100%) rename data_output/nextstrain/mpox/lineage-b.1/{unreleased => 2024-04-19--07-50-39Z}/pathogen.json (98%) rename data_output/nextstrain/mpox/lineage-b.1/{unreleased => 2024-04-19--07-50-39Z}/reference.fasta (100%) rename data_output/nextstrain/mpox/lineage-b.1/{unreleased => 2024-04-19--07-50-39Z}/sequences.fasta (100%) rename data_output/nextstrain/mpox/lineage-b.1/{unreleased => 2024-04-19--07-50-39Z}/tree.json (100%) diff --git a/data/nextstrain/flu/h1n1pdm/ha/CY121680/CHANGELOG.md b/data/nextstrain/flu/h1n1pdm/ha/CY121680/CHANGELOG.md index 0b80681e..fb9638ef 100644 --- a/data/nextstrain/flu/h1n1pdm/ha/CY121680/CHANGELOG.md +++ b/data/nextstrain/flu/h1n1pdm/ha/CY121680/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-04-19T07:50:39Z - aliasing of C.1.1.1 as D - addition of subclades D.1 - D.4: [D.1](https://github.com/influenza-clade-nomenclature/seasonal_A-H1N1pdm_HA/blob/main/subclades/D.1.yml), [D.2](https://github.com/influenza-clade-nomenclature/seasonal_A-H1N1pdm_HA/blob/main/subclades/D.2.yml), [D.3](https://github.com/influenza-clade-nomenclature/seasonal_A-H1N1pdm_HA/blob/main/subclades/D.3.yml), [D.4](https://github.com/influenza-clade-nomenclature/seasonal_A-H1N1pdm_HA/blob/main/subclades/D.4.yml) diff --git a/data/nextstrain/flu/h1n1pdm/ha/MW626062/CHANGELOG.md b/data/nextstrain/flu/h1n1pdm/ha/MW626062/CHANGELOG.md index 0b80681e..fb9638ef 100644 --- a/data/nextstrain/flu/h1n1pdm/ha/MW626062/CHANGELOG.md +++ b/data/nextstrain/flu/h1n1pdm/ha/MW626062/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-04-19T07:50:39Z - aliasing of C.1.1.1 as D - addition of subclades D.1 - D.4: [D.1](https://github.com/influenza-clade-nomenclature/seasonal_A-H1N1pdm_HA/blob/main/subclades/D.1.yml), [D.2](https://github.com/influenza-clade-nomenclature/seasonal_A-H1N1pdm_HA/blob/main/subclades/D.2.yml), [D.3](https://github.com/influenza-clade-nomenclature/seasonal_A-H1N1pdm_HA/blob/main/subclades/D.3.yml), [D.4](https://github.com/influenza-clade-nomenclature/seasonal_A-H1N1pdm_HA/blob/main/subclades/D.4.yml) diff --git a/data/nextstrain/flu/h1n1pdm/na/MW626056/CHANGELOG.md b/data/nextstrain/flu/h1n1pdm/na/MW626056/CHANGELOG.md index 379352f3..07f096cd 100644 --- a/data/nextstrain/flu/h1n1pdm/na/MW626056/CHANGELOG.md +++ b/data/nextstrain/flu/h1n1pdm/na/MW626056/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-04-19T07:50:39Z - addition of subclade [C.5.3.1](https://github.com/influenza-clade-nomenclature/seasonal_A-H1N1pdm_NA/blob/main/subclades/C.5.3.1.yml) - addition of subclade [C.5.3.2](https://github.com/influenza-clade-nomenclature/seasonal_A-H1N1pdm_NA/blob/main/subclades/C.5.3.2.yml) diff --git a/data/nextstrain/flu/h3n2/ha/CY163680/CHANGELOG.md b/data/nextstrain/flu/h3n2/ha/CY163680/CHANGELOG.md index 0715ae22..cf04bdf4 100644 --- a/data/nextstrain/flu/h3n2/ha/CY163680/CHANGELOG.md +++ b/data/nextstrain/flu/h3n2/ha/CY163680/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-04-19T07:50:39Z Update of the datasets with more recent data. No new clades were added on this occasion. diff --git a/data/nextstrain/flu/h3n2/ha/EPI1857216/CHANGELOG.md b/data/nextstrain/flu/h3n2/ha/EPI1857216/CHANGELOG.md index 0715ae22..cf04bdf4 100644 --- a/data/nextstrain/flu/h3n2/ha/EPI1857216/CHANGELOG.md +++ b/data/nextstrain/flu/h3n2/ha/EPI1857216/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-04-19T07:50:39Z Update of the datasets with more recent data. No new clades were added on this occasion. diff --git a/data/nextstrain/flu/h3n2/na/EPI1857215/CHANGELOG.md b/data/nextstrain/flu/h3n2/na/EPI1857215/CHANGELOG.md index 2e1ec3a0..c33691e7 100644 --- a/data/nextstrain/flu/h3n2/na/EPI1857215/CHANGELOG.md +++ b/data/nextstrain/flu/h3n2/na/EPI1857215/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-04-19T07:50:39Z - addition of subclade [B.4.1](https://github.com/influenza-clade-nomenclature/seasonal_A-H3N2_NA/blob/main/subclades/B.4.1.yml) - addition of subclade [B.4.2](https://github.com/influenza-clade-nomenclature/seasonal_A-H3N2_NA/blob/main/subclades/B.4.2.yml) diff --git a/data/nextstrain/flu/vic/ha/KX058884/CHANGELOG.md b/data/nextstrain/flu/vic/ha/KX058884/CHANGELOG.md index dcbcd44a..98f2380e 100644 --- a/data/nextstrain/flu/vic/ha/KX058884/CHANGELOG.md +++ b/data/nextstrain/flu/vic/ha/KX058884/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-04-19T07:50:39Z Update of the datasets with more recent data. No new clades were added on this occasion. diff --git a/data/nextstrain/flu/vic/na/CY073894/CHANGELOG.md b/data/nextstrain/flu/vic/na/CY073894/CHANGELOG.md index 1a85aa3d..af1d32ba 100644 --- a/data/nextstrain/flu/vic/na/CY073894/CHANGELOG.md +++ b/data/nextstrain/flu/vic/na/CY073894/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-04-19T07:50:39Z - revision of definitions of B.7.2 and B.7.3 - addition of subclade [B.7.4](https://github.com/influenza-clade-nomenclature/seasonal_B-Vic_NA/blob/main/subclades/B.7.4.yml) diff --git a/data/nextstrain/mpox/all-clades/CHANGELOG.md b/data/nextstrain/mpox/all-clades/CHANGELOG.md index 10842811..b4dcf1d4 100644 --- a/data/nextstrain/mpox/all-clades/CHANGELOG.md +++ b/data/nextstrain/mpox/all-clades/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-04-19T07:50:39Z - New hMPXV-1 lineages B.1.21, B.1.22, and C.1.1 are now included in the dataset. For more information on these lineages, see the [hMPXV-1 lineage definitions PR](https://github.com/mpxv-lineages/lineage-designation/pull/37) - The sequences used in the reference trees have been updated to include the latest sequences available in Genbank as of 2024-04-16 diff --git a/data/nextstrain/mpox/clade-iib/CHANGELOG.md b/data/nextstrain/mpox/clade-iib/CHANGELOG.md index 76cdb43c..546fafa8 100644 --- a/data/nextstrain/mpox/clade-iib/CHANGELOG.md +++ b/data/nextstrain/mpox/clade-iib/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-04-19T07:50:39Z - New hMPXV-1 lineages B.1.21, B.1.22, and C.1.1 are now included in the dataset. For more information on these lineages, see the [hMPXV-1 lineage definitions PR](https://github.com/mpxv-lineages/lineage-designation/pull/37) - The sequences used in the reference trees have been updated to include the latest sequences available in Genbank as of 2024-04-16 diff --git a/data/nextstrain/mpox/lineage-b.1/CHANGELOG.md b/data/nextstrain/mpox/lineage-b.1/CHANGELOG.md index 2cf7e814..08fc3ebe 100644 --- a/data/nextstrain/mpox/lineage-b.1/CHANGELOG.md +++ b/data/nextstrain/mpox/lineage-b.1/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-04-19T07:50:39Z - New hMPXV-1 lineages B.1.21, B.1.22, and C.1.1 are now included in the dataset. For more information on these lineages, see the [hMPXV-1 lineage definitions PR](https://github.com/mpxv-lineages/lineage-designation/pull/37) - The sequences used in the reference trees have been updated to include the latest sequences available in Genbank as of 2024-04-16 diff --git a/data_output/index.json b/data_output/index.json index 7c79fb34..0ab290bf 100644 --- a/data_output/index.json +++ b/data_output/index.json @@ -533,7 +533,8 @@ }, "versions": [ { - "tag": "unreleased", + "updatedAt": "2024-04-19T07:50:39Z", + "tag": "2024-04-19--07-50-39Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -549,7 +550,8 @@ } ], "version": { - "tag": "unreleased", + "updatedAt": "2024-04-19T07:50:39Z", + "tag": "2024-04-19--07-50-39Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -614,7 +616,8 @@ }, "versions": [ { - "tag": "unreleased", + "updatedAt": "2024-04-19T07:50:39Z", + "tag": "2024-04-19--07-50-39Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -630,7 +633,8 @@ } ], "version": { - "tag": "unreleased", + "updatedAt": "2024-04-19T07:50:39Z", + "tag": "2024-04-19--07-50-39Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -694,7 +698,8 @@ }, "versions": [ { - "tag": "unreleased", + "updatedAt": "2024-04-19T07:50:39Z", + "tag": "2024-04-19--07-50-39Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -710,7 +715,8 @@ } ], "version": { - "tag": "unreleased", + "updatedAt": "2024-04-19T07:50:39Z", + "tag": "2024-04-19--07-50-39Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -773,7 +779,8 @@ }, "versions": [ { - "tag": "unreleased", + "updatedAt": "2024-04-19T07:50:39Z", + "tag": "2024-04-19--07-50-39Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -797,7 +804,8 @@ } ], "version": { - "tag": "unreleased", + "updatedAt": "2024-04-19T07:50:39Z", + "tag": "2024-04-19--07-50-39Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -863,7 +871,8 @@ }, "versions": [ { - "tag": "unreleased", + "updatedAt": "2024-04-19T07:50:39Z", + "tag": "2024-04-19--07-50-39Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -887,7 +896,8 @@ } ], "version": { - "tag": "unreleased", + "updatedAt": "2024-04-19T07:50:39Z", + "tag": "2024-04-19--07-50-39Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -951,7 +961,8 @@ }, "versions": [ { - "tag": "unreleased", + "updatedAt": "2024-04-19T07:50:39Z", + "tag": "2024-04-19--07-50-39Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -967,7 +978,8 @@ } ], "version": { - "tag": "unreleased", + "updatedAt": "2024-04-19T07:50:39Z", + "tag": "2024-04-19--07-50-39Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -1032,7 +1044,8 @@ }, "versions": [ { - "tag": "unreleased", + "updatedAt": "2024-04-19T07:50:39Z", + "tag": "2024-04-19--07-50-39Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -1048,7 +1061,8 @@ } ], "version": { - "tag": "unreleased", + "updatedAt": "2024-04-19T07:50:39Z", + "tag": "2024-04-19--07-50-39Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -1112,7 +1126,8 @@ }, "versions": [ { - "tag": "unreleased", + "updatedAt": "2024-04-19T07:50:39Z", + "tag": "2024-04-19--07-50-39Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -1128,7 +1143,8 @@ } ], "version": { - "tag": "unreleased", + "updatedAt": "2024-04-19T07:50:39Z", + "tag": "2024-04-19--07-50-39Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -1406,7 +1422,8 @@ }, "versions": [ { - "tag": "unreleased", + "updatedAt": "2024-04-19T07:50:39Z", + "tag": "2024-04-19--07-50-39Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -1422,7 +1439,8 @@ } ], "version": { - "tag": "unreleased", + "updatedAt": "2024-04-19T07:50:39Z", + "tag": "2024-04-19--07-50-39Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -1461,7 +1479,8 @@ }, "versions": [ { - "tag": "unreleased", + "updatedAt": "2024-04-19T07:50:39Z", + "tag": "2024-04-19--07-50-39Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -1477,7 +1496,8 @@ } ], "version": { - "tag": "unreleased", + "updatedAt": "2024-04-19T07:50:39Z", + "tag": "2024-04-19--07-50-39Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -1519,7 +1539,8 @@ }, "versions": [ { - "tag": "unreleased", + "updatedAt": "2024-04-19T07:50:39Z", + "tag": "2024-04-19--07-50-39Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -1535,7 +1556,8 @@ } ], "version": { - "tag": "unreleased", + "updatedAt": "2024-04-19T07:50:39Z", + "tag": "2024-04-19--07-50-39Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/CHANGELOG.md b/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-04-19--07-50-39Z/CHANGELOG.md similarity index 98% rename from data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/CHANGELOG.md rename to data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-04-19--07-50-39Z/CHANGELOG.md index 0b80681e..fb9638ef 100644 --- a/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/CHANGELOG.md +++ b/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-04-19--07-50-39Z/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-04-19T07:50:39Z - aliasing of C.1.1.1 as D - addition of subclades D.1 - D.4: [D.1](https://github.com/influenza-clade-nomenclature/seasonal_A-H1N1pdm_HA/blob/main/subclades/D.1.yml), [D.2](https://github.com/influenza-clade-nomenclature/seasonal_A-H1N1pdm_HA/blob/main/subclades/D.2.yml), [D.3](https://github.com/influenza-clade-nomenclature/seasonal_A-H1N1pdm_HA/blob/main/subclades/D.3.yml), [D.4](https://github.com/influenza-clade-nomenclature/seasonal_A-H1N1pdm_HA/blob/main/subclades/D.4.yml) diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/README.md b/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-04-19--07-50-39Z/README.md similarity index 100% rename from data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/README.md rename to data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-04-19--07-50-39Z/README.md diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/dataset.zip b/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-04-19--07-50-39Z/dataset.zip similarity index 99% rename from data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/dataset.zip rename to data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-04-19--07-50-39Z/dataset.zip index e7780e722006d711ccf92e5d9a5f488b75564afc..2dde5c9aeeeaf690f976f7e35b14d122de816434 100644 GIT binary patch delta 340 zcmex7(RSk`TgL!zW)=|!2vB4&di?c-Ju3qP2=f31ojn}=++BVA-Su))l$8~X42(>4 z4NPdx=Ym^po+JHHuY>GT`!{F>4TH#0EsLPG#VEn#e$ zF5|&(#kg^LxCg%tlZ5j0sUG~+%G%A03?)UWsd`z(`FR1}tZX2~>_E7Xk%6Jgogc^p E0I{)2od5s; delta 288 zcmdlu$@cR^Tk`;KW)=|!2vB5*YKqD>Wo2LhVIH8MvxlRfyQ`1CyIyXJva&*GUQudJ zYGQF}%0@?j0WJnH!R;5g7#J>aZJs4i$R${kn66}{pi~N1)f^z*9w5yK#7scU48$xz z%nHP8K+F!r96-zo#9Tnk4a7V^%nQVP+XJNet#mly4w^pMo!^@=e)@fPelwc;h zC8q0p@C!&I9KpcA3-t(yTEbW{J<5aMim`b5R1ba|-djox48^I1rKx$zsm0S5dhm-) cw`^t<0QnLOmN33;nl9kUFU@A-&JPp;0Q;Oq-T(jq diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/genome_annotation.gff3 b/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-04-19--07-50-39Z/genome_annotation.gff3 similarity index 100% rename from data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/genome_annotation.gff3 rename to data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-04-19--07-50-39Z/genome_annotation.gff3 diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/pathogen.json b/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-04-19--07-50-39Z/pathogen.json similarity index 97% rename from data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/pathogen.json rename to data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-04-19--07-50-39Z/pathogen.json index 3063dca1..0edeebfe 100644 --- a/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/pathogen.json +++ b/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-04-19--07-50-39Z/pathogen.json @@ -117,7 +117,8 @@ "reference name": "A/California/7/2009-egg" }, "version": { - "tag": "unreleased", + "updatedAt": "2024-04-19T07:50:39Z", + "tag": "2024-04-19--07-50-39Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/reference.fasta b/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-04-19--07-50-39Z/reference.fasta similarity index 100% rename from data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/reference.fasta rename to data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-04-19--07-50-39Z/reference.fasta diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/sequences.fasta b/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-04-19--07-50-39Z/sequences.fasta similarity index 100% rename from data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/sequences.fasta rename to data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-04-19--07-50-39Z/sequences.fasta diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/tree.json b/data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-04-19--07-50-39Z/tree.json similarity index 100% rename from data_output/nextstrain/flu/h1n1pdm/ha/CY121680/unreleased/tree.json rename to data_output/nextstrain/flu/h1n1pdm/ha/CY121680/2024-04-19--07-50-39Z/tree.json diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/CHANGELOG.md b/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-04-19--07-50-39Z/CHANGELOG.md similarity index 98% rename from data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/CHANGELOG.md rename to data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-04-19--07-50-39Z/CHANGELOG.md index 0b80681e..fb9638ef 100644 --- a/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/CHANGELOG.md +++ b/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-04-19--07-50-39Z/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-04-19T07:50:39Z - aliasing of C.1.1.1 as D - addition of subclades D.1 - D.4: [D.1](https://github.com/influenza-clade-nomenclature/seasonal_A-H1N1pdm_HA/blob/main/subclades/D.1.yml), [D.2](https://github.com/influenza-clade-nomenclature/seasonal_A-H1N1pdm_HA/blob/main/subclades/D.2.yml), [D.3](https://github.com/influenza-clade-nomenclature/seasonal_A-H1N1pdm_HA/blob/main/subclades/D.3.yml), [D.4](https://github.com/influenza-clade-nomenclature/seasonal_A-H1N1pdm_HA/blob/main/subclades/D.4.yml) diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/README.md b/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-04-19--07-50-39Z/README.md similarity index 100% rename from data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/README.md rename to data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-04-19--07-50-39Z/README.md diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/dataset.zip b/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-04-19--07-50-39Z/dataset.zip similarity index 99% rename from data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/dataset.zip rename to data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-04-19--07-50-39Z/dataset.zip index eaec881d0acf162fe19cb7a29ed7775ecd51e3cd..c6c8e2ce4e552713233040a34240355789bd77a0 100644 GIT binary patch delta 313 zcmeBPWpi?sjbnf}Gm8iV1Sm2XJ^p&ao|S2N6kfl^6gI;s*~T?2DnQv+R~!Ofeb+BZot0x=U1GXpUT5VHa?8xXStF$WNH0x=g5 za|1CC5c6)|B*nMs2PfPo({qLSy%{s7?-b@YW4t&0gD}6QG~BsBC-Xu*52BVZzMgI( i!f(YGI6Ys4--hw_^ff?=NwRtRD-nKawn@VLKt%waz*FM@ delta 272 zcmX@P%BFjjjd_4KGm8iV1Sm2@HAQ8cvNAA$Fb`1B*~8J#-POn6T`xC9Sy>@8uP8Mq zHL*A~WuxN`eoond0#9~s1_t)cOad#p1WOXrm8=w$O5uu{KS;HIkYWU4CLm@8Viq7~ z1!6WJW(Q&pAm#*OE+FOxVjdvo-Tpy}Z_^J>xLc;L7UuV6jGz8pnBR=?%5*&ueobk( z)j;ccq0R?UOBf$cFB0LmVicafR)pV%aqje2KuY;`6C*=OQEIAQR&jn_fHx}}NG&@M NE@Wh22odH7@&FDrN&5f* diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/genome_annotation.gff3 b/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-04-19--07-50-39Z/genome_annotation.gff3 similarity index 100% rename from data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/genome_annotation.gff3 rename to data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-04-19--07-50-39Z/genome_annotation.gff3 diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/pathogen.json b/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-04-19--07-50-39Z/pathogen.json similarity index 97% rename from data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/pathogen.json rename to data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-04-19--07-50-39Z/pathogen.json index b8379077..c1e3f46e 100644 --- a/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/pathogen.json +++ b/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-04-19--07-50-39Z/pathogen.json @@ -119,7 +119,8 @@ "reference name": "A/Wisconsin/588/2019" }, "version": { - "tag": "unreleased", + "updatedAt": "2024-04-19T07:50:39Z", + "tag": "2024-04-19--07-50-39Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/reference.fasta b/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-04-19--07-50-39Z/reference.fasta similarity index 100% rename from data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/reference.fasta rename to data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-04-19--07-50-39Z/reference.fasta diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/sequences.fasta b/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-04-19--07-50-39Z/sequences.fasta similarity index 100% rename from data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/sequences.fasta rename to data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-04-19--07-50-39Z/sequences.fasta diff --git a/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/tree.json b/data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-04-19--07-50-39Z/tree.json similarity index 100% rename from data_output/nextstrain/flu/h1n1pdm/ha/MW626062/unreleased/tree.json rename to data_output/nextstrain/flu/h1n1pdm/ha/MW626062/2024-04-19--07-50-39Z/tree.json diff --git a/data_output/nextstrain/flu/h1n1pdm/na/MW626056/unreleased/CHANGELOG.md b/data_output/nextstrain/flu/h1n1pdm/na/MW626056/2024-04-19--07-50-39Z/CHANGELOG.md similarity index 96% rename from data_output/nextstrain/flu/h1n1pdm/na/MW626056/unreleased/CHANGELOG.md rename to data_output/nextstrain/flu/h1n1pdm/na/MW626056/2024-04-19--07-50-39Z/CHANGELOG.md index 379352f3..07f096cd 100644 --- a/data_output/nextstrain/flu/h1n1pdm/na/MW626056/unreleased/CHANGELOG.md +++ b/data_output/nextstrain/flu/h1n1pdm/na/MW626056/2024-04-19--07-50-39Z/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-04-19T07:50:39Z - addition of subclade [C.5.3.1](https://github.com/influenza-clade-nomenclature/seasonal_A-H1N1pdm_NA/blob/main/subclades/C.5.3.1.yml) - addition of subclade [C.5.3.2](https://github.com/influenza-clade-nomenclature/seasonal_A-H1N1pdm_NA/blob/main/subclades/C.5.3.2.yml) diff --git a/data_output/nextstrain/flu/h1n1pdm/na/MW626056/unreleased/README.md b/data_output/nextstrain/flu/h1n1pdm/na/MW626056/2024-04-19--07-50-39Z/README.md similarity index 100% rename from data_output/nextstrain/flu/h1n1pdm/na/MW626056/unreleased/README.md rename to data_output/nextstrain/flu/h1n1pdm/na/MW626056/2024-04-19--07-50-39Z/README.md diff --git a/data_output/nextstrain/flu/h1n1pdm/na/MW626056/unreleased/dataset.zip b/data_output/nextstrain/flu/h1n1pdm/na/MW626056/2024-04-19--07-50-39Z/dataset.zip similarity index 99% rename from data_output/nextstrain/flu/h1n1pdm/na/MW626056/unreleased/dataset.zip rename to data_output/nextstrain/flu/h1n1pdm/na/MW626056/2024-04-19--07-50-39Z/dataset.zip index 2979b171f50ee85fd4981cd735b12d74fc68eb96..f2c2f5e46de15bb9a242d16c7d0600c4d02dd122 100644 GIT binary patch delta 322 zcmex#&2GbWJEs6|W)=|!2vB6mpJbgkn~8w|gn591&K{0_?yf%m?s~Z?%E}5x21X{j z1}3_OmLUe_R;C74#+FfB6AvnEjMy%~Da2BAZ7w$W*}w(Vpbq#17da{<^W<& zAm##MZXo6XVqPHT+ny}VpV7w&_tEq#EBU<{k4{%u#c#&wIX!$8zosm2N6kfl^6gI;s*~T?2DnQv+R~!OdBc?OBqHK+FWh%s|Wn#H>Kf2E^<@%mKulK+FZi z+(66&#JoVv2gLk9EC9rU+p{EvzQ=OHeKtL-T*#a8%JgmJLS~HDroSy0(v*ffALs>M zXkdV-C5(@!8&(KeF>y*w&#e%$W~`XLvO>s4Iirq|p`<7^RWGYJKQF+Wl?|kr9S9dP LGBEU)3juim19)7s delta 289 zcmX^1$+P2=r+I)kGm8iV1Sm2rIGl2E0W$*w2=f31ojn}=++BVA-Su))l$8}i^NLb) zQWJ|)Q#Lwo;Ny(>Xmag17X!ob&A<3ExdclR)0M0gluF@>npa4+uaIN}VkRJF24WT< zW(8t4AZ7<*4j|?PVlE)&24Wr{<^^ItAm#^R0U#FKzCu#ydn_m1ZPQnj3wbl1n*OC+ z$c*vKbnOZuO=-AOfX?BCdIv-;VZ1p#ze320>9pkZ)fGb4j8@a1R|wfCYt=C_loX|= b>SYz@=LLAPvVjz{1K~nO28O_LAs`O`Gy!fS47C*?^cGh&h0m6NtHh zm>YWfkY=1$eWvfz+}C;X+0R KhTacCKpp_Ql2y6@ delta 289 zcmX@|#JlZ@w|Rg!Gm8iV1Sm2rIGl2E0W$*w2=f31ojn}=++BVA-Su))l$8}i^NLb) zQWJ|)Q#Lvp@Npe|pMCuw9|OZbzRlHq^Z5iz64RBe6qHKgs+!|v+v8;!ftU%1nSq!E zh*^P{4T#x+m;;D8ftU-3xq+Amh1}U zAY{hqJ6-dmkft=kEes62Q2&6aC5(~Nb3Y1MF*Z$K@lnWzap&}>KuY;uBO^meQEIAQ aR&jn_fHx}}NG&@ME@Wh2@c$qLPD~Gm8iV1Sm2n`0%WYXJTLgVIH8MvxlRfyQ`1CyIyXJva*7afsu)> zfr+l6Wr%^fm8pT1v1Jt3WGhD5jiJZ6IBR#!J-UO7fnmpHRch&Am#vK zP9Wym9wW-#wu}?*h3T(%b9*y(PB-7fZN?}tJ#P=UrZn7%KxgtoeGQ_PFiK3{w1?Y@ y@%Qw%d$?^FuT0n4%Wb2qXUE7;Qk0simsOmf7vRmx22#rogbNuN7zFlk19<=g<4}qK delta 260 zcmX^9Td(uCo_T;bGm8iV1Sm4RdbMg*C=&w%2=f31ojn}=++BVA-Su))l$8}i^NLb) zQWJ|)Q#Lw2<>GXTF8SKR#lXl)G&iC*1z&ntQmt8SAH)?%_6LWShQb54WZ?+&Z9@yig~D zs3nYi(?9Itwqo2nU3)LL4db-w89++;gDoRNNl|L5URH5_UVt|%8%QlX5H4h7V7RoK H8^{9yQVB}P diff --git a/data_output/nextstrain/flu/h3n2/na/EPI1857215/unreleased/genome_annotation.gff3 b/data_output/nextstrain/flu/h3n2/na/EPI1857215/2024-04-19--07-50-39Z/genome_annotation.gff3 similarity index 100% rename from data_output/nextstrain/flu/h3n2/na/EPI1857215/unreleased/genome_annotation.gff3 rename to data_output/nextstrain/flu/h3n2/na/EPI1857215/2024-04-19--07-50-39Z/genome_annotation.gff3 diff --git a/data_output/nextstrain/flu/h3n2/na/EPI1857215/unreleased/pathogen.json b/data_output/nextstrain/flu/h3n2/na/EPI1857215/2024-04-19--07-50-39Z/pathogen.json similarity index 97% rename from data_output/nextstrain/flu/h3n2/na/EPI1857215/unreleased/pathogen.json rename to data_output/nextstrain/flu/h3n2/na/EPI1857215/2024-04-19--07-50-39Z/pathogen.json index 915f8f1e..353b14eb 100644 --- a/data_output/nextstrain/flu/h3n2/na/EPI1857215/unreleased/pathogen.json +++ b/data_output/nextstrain/flu/h3n2/na/EPI1857215/2024-04-19--07-50-39Z/pathogen.json @@ -113,7 +113,8 @@ "reference name": "A/Darwin/6/2021" }, "version": { - "tag": "unreleased", + "updatedAt": "2024-04-19T07:50:39Z", + "tag": "2024-04-19--07-50-39Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" diff --git a/data_output/nextstrain/flu/h3n2/na/EPI1857215/unreleased/reference.fasta b/data_output/nextstrain/flu/h3n2/na/EPI1857215/2024-04-19--07-50-39Z/reference.fasta similarity index 100% rename from data_output/nextstrain/flu/h3n2/na/EPI1857215/unreleased/reference.fasta rename to data_output/nextstrain/flu/h3n2/na/EPI1857215/2024-04-19--07-50-39Z/reference.fasta diff --git a/data_output/nextstrain/flu/h3n2/na/EPI1857215/unreleased/sequences.fasta b/data_output/nextstrain/flu/h3n2/na/EPI1857215/2024-04-19--07-50-39Z/sequences.fasta similarity index 100% rename from data_output/nextstrain/flu/h3n2/na/EPI1857215/unreleased/sequences.fasta rename to data_output/nextstrain/flu/h3n2/na/EPI1857215/2024-04-19--07-50-39Z/sequences.fasta diff --git a/data_output/nextstrain/flu/h3n2/na/EPI1857215/unreleased/tree.json b/data_output/nextstrain/flu/h3n2/na/EPI1857215/2024-04-19--07-50-39Z/tree.json similarity index 100% rename from data_output/nextstrain/flu/h3n2/na/EPI1857215/unreleased/tree.json rename to data_output/nextstrain/flu/h3n2/na/EPI1857215/2024-04-19--07-50-39Z/tree.json diff --git a/data_output/nextstrain/flu/vic/ha/KX058884/unreleased/CHANGELOG.md b/data_output/nextstrain/flu/vic/ha/KX058884/2024-04-19--07-50-39Z/CHANGELOG.md similarity index 97% rename from data_output/nextstrain/flu/vic/ha/KX058884/unreleased/CHANGELOG.md rename to data_output/nextstrain/flu/vic/ha/KX058884/2024-04-19--07-50-39Z/CHANGELOG.md index dcbcd44a..98f2380e 100644 --- a/data_output/nextstrain/flu/vic/ha/KX058884/unreleased/CHANGELOG.md +++ b/data_output/nextstrain/flu/vic/ha/KX058884/2024-04-19--07-50-39Z/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-04-19T07:50:39Z Update of the datasets with more recent data. No new clades were added on this occasion. diff --git a/data_output/nextstrain/flu/vic/ha/KX058884/unreleased/README.md b/data_output/nextstrain/flu/vic/ha/KX058884/2024-04-19--07-50-39Z/README.md similarity index 100% rename from data_output/nextstrain/flu/vic/ha/KX058884/unreleased/README.md rename to data_output/nextstrain/flu/vic/ha/KX058884/2024-04-19--07-50-39Z/README.md diff --git a/data_output/nextstrain/flu/vic/ha/KX058884/unreleased/dataset.zip b/data_output/nextstrain/flu/vic/ha/KX058884/2024-04-19--07-50-39Z/dataset.zip similarity index 99% rename from data_output/nextstrain/flu/vic/ha/KX058884/unreleased/dataset.zip rename to data_output/nextstrain/flu/vic/ha/KX058884/2024-04-19--07-50-39Z/dataset.zip index d47232d574450a5850cd2438696aedc74c406ac0..013d08d14e098fd0396282e65c50a5259ad43e04 100644 GIT binary patch delta 331 zcmZ2?#qG@%H^%^PW)=|!2vB4=Zd5X_n3;hAgn591&K{0_?yf%m?s~Z?%E}5x21X{j z1}3_OmLUe_R;C74#+FeV&A0M$?LPLTL5G`xL5F+uH{O|CuB8Pji6yBijwMP~3QE{? zDd})20D)3TVmhi4U0nlnT~h;Hpvlb(B-$59Faj|X5HkZY3lOscF&hxG12G2>a{@6J z5OV`D4-oSLF&_}~1F^vN1rmbK`#Is>nm%ELpf}^(>33ELnlatxnf#VVV!F;sK>=xm x2N)Q5p}_&7mN34U9==l0iqU@hq?Lj;jPBFV11To9DbsmZ2}-kVT_Ffm1OPp0TebiI delta 263 zcmaEJ#ckacH}e2*W)=|!2vB4Qd|@~#lbL}5gn591&K{0_?yf%m?s~Z?%E}6%c}1x? zsfop@DH|QP@^a-UFA4p@#lY}`YZKp0F2Rz-bR{bVrBb+}=6e$D_aqpBm(K7wQ!dwS@8B^rOcfH&cWn~2;10xe% z0~1|C%Mb%|D^mk2W6P+G=FWng`!n4?@8x1(*t@w|P@BuOv>+w1BsImcM9E4)37aM* z9WDhRP%24GM^&P$YhbQxYM=`=xOu;H`+jLgAZ7w$W*}w(Vpbq#17da{<^W<&Am##M zZXo6XV&3ihrTLmZa>9Kw-HVssn{n&(X}tVqi~`fo^73m+!<`FsGB4EgAZiI?*>piZ zek;bf={|h?HjGKrJAst)yHG}klA_d9y{zK=yZ~=jHjr9&AY91Ez>v?&599#=MfX(j delta 272 zcmZ2B&*sHk8}k5fW)=|!2vB4QWi--jWM*IhVIH8MvxlRfyQ`1CyIyXJva&*GUQudJ zYGQF}%0@?LLCz0rIQcud7#KP?_X=ur36>@$uU*s!Tr)q?9*=GBT7DrKaj-73b##c(byB)UpHN NLPiD#LtcI$4*<{8N$mgt diff --git a/data_output/nextstrain/flu/vic/na/CY073894/unreleased/genome_annotation.gff3 b/data_output/nextstrain/flu/vic/na/CY073894/2024-04-19--07-50-39Z/genome_annotation.gff3 similarity index 100% rename from data_output/nextstrain/flu/vic/na/CY073894/unreleased/genome_annotation.gff3 rename to data_output/nextstrain/flu/vic/na/CY073894/2024-04-19--07-50-39Z/genome_annotation.gff3 diff --git a/data_output/nextstrain/flu/vic/na/CY073894/unreleased/pathogen.json b/data_output/nextstrain/flu/vic/na/CY073894/2024-04-19--07-50-39Z/pathogen.json similarity index 97% rename from data_output/nextstrain/flu/vic/na/CY073894/unreleased/pathogen.json rename to data_output/nextstrain/flu/vic/na/CY073894/2024-04-19--07-50-39Z/pathogen.json index 19d4585e..e7a15161 100644 --- a/data_output/nextstrain/flu/vic/na/CY073894/unreleased/pathogen.json +++ b/data_output/nextstrain/flu/vic/na/CY073894/2024-04-19--07-50-39Z/pathogen.json @@ -113,7 +113,8 @@ "reference name": "B/Brisbane/60/2008" }, "version": { - "tag": "unreleased", + "updatedAt": "2024-04-19T07:50:39Z", + "tag": "2024-04-19--07-50-39Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" diff --git a/data_output/nextstrain/flu/vic/na/CY073894/unreleased/reference.fasta b/data_output/nextstrain/flu/vic/na/CY073894/2024-04-19--07-50-39Z/reference.fasta similarity index 100% rename from data_output/nextstrain/flu/vic/na/CY073894/unreleased/reference.fasta rename to data_output/nextstrain/flu/vic/na/CY073894/2024-04-19--07-50-39Z/reference.fasta diff --git a/data_output/nextstrain/flu/vic/na/CY073894/unreleased/sequences.fasta b/data_output/nextstrain/flu/vic/na/CY073894/2024-04-19--07-50-39Z/sequences.fasta similarity index 100% rename from data_output/nextstrain/flu/vic/na/CY073894/unreleased/sequences.fasta rename to data_output/nextstrain/flu/vic/na/CY073894/2024-04-19--07-50-39Z/sequences.fasta diff --git a/data_output/nextstrain/flu/vic/na/CY073894/unreleased/tree.json b/data_output/nextstrain/flu/vic/na/CY073894/2024-04-19--07-50-39Z/tree.json similarity index 100% rename from data_output/nextstrain/flu/vic/na/CY073894/unreleased/tree.json rename to data_output/nextstrain/flu/vic/na/CY073894/2024-04-19--07-50-39Z/tree.json diff --git a/data_output/nextstrain/mpox/all-clades/unreleased/CHANGELOG.md b/data_output/nextstrain/mpox/all-clades/2024-04-19--07-50-39Z/CHANGELOG.md similarity index 98% rename from data_output/nextstrain/mpox/all-clades/unreleased/CHANGELOG.md rename to data_output/nextstrain/mpox/all-clades/2024-04-19--07-50-39Z/CHANGELOG.md index 10842811..b4dcf1d4 100644 --- a/data_output/nextstrain/mpox/all-clades/unreleased/CHANGELOG.md +++ b/data_output/nextstrain/mpox/all-clades/2024-04-19--07-50-39Z/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-04-19T07:50:39Z - New hMPXV-1 lineages B.1.21, B.1.22, and C.1.1 are now included in the dataset. For more information on these lineages, see the [hMPXV-1 lineage definitions PR](https://github.com/mpxv-lineages/lineage-designation/pull/37) - The sequences used in the reference trees have been updated to include the latest sequences available in Genbank as of 2024-04-16 diff --git a/data_output/nextstrain/mpox/all-clades/unreleased/README.md b/data_output/nextstrain/mpox/all-clades/2024-04-19--07-50-39Z/README.md similarity index 100% rename from data_output/nextstrain/mpox/all-clades/unreleased/README.md rename to data_output/nextstrain/mpox/all-clades/2024-04-19--07-50-39Z/README.md diff --git a/data_output/nextstrain/mpox/all-clades/unreleased/dataset.zip b/data_output/nextstrain/mpox/all-clades/2024-04-19--07-50-39Z/dataset.zip similarity index 99% rename from data_output/nextstrain/mpox/all-clades/unreleased/dataset.zip rename to data_output/nextstrain/mpox/all-clades/2024-04-19--07-50-39Z/dataset.zip index c3c50d85122c10d043a2412ef660a59a535271bd..a35f9be5c3bd61227e3ee410892a9813683b00f4 100644 GIT binary patch delta 460 zcmZwEJxfAS7zglsd@D^W&0e*k#=r4s3^uUh;56^Rk|MT)#C%2V4No{0}Cb#rce(Ck|{bJiJ zNo{sCS5{MNnRISF6D}140XfEEamwN}n%rWlmS7rB?p&%*Dv30$Z_n4chEtLn)srS! zcBaoxi-qz*F;!MHS@~~K3E5?FrrE`t!iAbI=8C)Ntl;?|N OS3Kmo*RrW|41EJX2N@KY zhXq)KC0K?8tiUR)!8)jrgbmnqdfn7{iFd=XFAb*ChV2+^i{9Bk21`WTAP`3AKhOSn vq^EYuWN8|+%O>0Pe0q~YfS41A zxqz4(h-A*fLIWSg@9NXh(&-{6o|!uSR9BYfLIcUrGQu(h-H9S7Kr75 zSRRNKfLL*R<9(%BGdbZwGhL-p*_*L*dO@YK8OugK28QW|AB4rGAE;CokcI~WFd%rL tp$ejwFg8wqU8!uvr0`(6dX=&@K}5DNma5D*Iku?P^00HyfIvYX2>2Nso%s8nu(ZBa||o<{8ED8@Wed2y9>n2RLCET;K)|jDQRZjDi=& zzz2R9hX72#Buv3H%)l%JAp~KVg9xY)1r1^_4-2peaae)`EW-*UfkFyafk7HFkcAxN zp#XYE?yb3=-Gj(Q*y2^v6sHz15TCfUcp^9m6~QXMztnGcrN*wmv OzG$|2$XT>FX1)P}37g0O delta 443 zcmX}oJ4=Fb6vy%ZKkucLW;gBPrJG&su0GNt5r#&&G)05pLzI_DZEI<2Y>VV-#auAxJ1mvef|{+Ux$DGBLOwTar-iF#-X%o7{@sucm$RBZ3B-MY%g*CXswL3{ z1B@`i3=6EVp&LE0!+~D(p&w4TFaS3OF@#}^U=$vBF@|wWU=lv~5kL@An8pldF^3T5 zv4BM^A&h0LU=?dv#|AbLLA0J~#jJ0(PH5VZuB7Fy_M|HjY0;Xx67qHeA|%Iu&h7Ca t8(N^I#AQ)Ct|?nGrrj}u9)nL*%c>eatDKiIX_LAAYoYI@5Jp{L`vpL0rVIc8 diff --git a/data_output/nextstrain/mpox/lineage-b.1/unreleased/genome_annotation.gff3 b/data_output/nextstrain/mpox/lineage-b.1/2024-04-19--07-50-39Z/genome_annotation.gff3 similarity index 100% rename from data_output/nextstrain/mpox/lineage-b.1/unreleased/genome_annotation.gff3 rename to data_output/nextstrain/mpox/lineage-b.1/2024-04-19--07-50-39Z/genome_annotation.gff3 diff --git a/data_output/nextstrain/mpox/lineage-b.1/unreleased/pathogen.json b/data_output/nextstrain/mpox/lineage-b.1/2024-04-19--07-50-39Z/pathogen.json similarity index 98% rename from data_output/nextstrain/mpox/lineage-b.1/unreleased/pathogen.json rename to data_output/nextstrain/mpox/lineage-b.1/2024-04-19--07-50-39Z/pathogen.json index f454d6b2..80e34b63 100644 --- a/data_output/nextstrain/mpox/lineage-b.1/unreleased/pathogen.json +++ b/data_output/nextstrain/mpox/lineage-b.1/2024-04-19--07-50-39Z/pathogen.json @@ -282,7 +282,8 @@ "hMPXV_B1" ], "version": { - "tag": "unreleased", + "updatedAt": "2024-04-19T07:50:39Z", + "tag": "2024-04-19--07-50-39Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" diff --git a/data_output/nextstrain/mpox/lineage-b.1/unreleased/reference.fasta b/data_output/nextstrain/mpox/lineage-b.1/2024-04-19--07-50-39Z/reference.fasta similarity index 100% rename from data_output/nextstrain/mpox/lineage-b.1/unreleased/reference.fasta rename to data_output/nextstrain/mpox/lineage-b.1/2024-04-19--07-50-39Z/reference.fasta diff --git a/data_output/nextstrain/mpox/lineage-b.1/unreleased/sequences.fasta b/data_output/nextstrain/mpox/lineage-b.1/2024-04-19--07-50-39Z/sequences.fasta similarity index 100% rename from data_output/nextstrain/mpox/lineage-b.1/unreleased/sequences.fasta rename to data_output/nextstrain/mpox/lineage-b.1/2024-04-19--07-50-39Z/sequences.fasta diff --git a/data_output/nextstrain/mpox/lineage-b.1/unreleased/tree.json b/data_output/nextstrain/mpox/lineage-b.1/2024-04-19--07-50-39Z/tree.json similarity index 100% rename from data_output/nextstrain/mpox/lineage-b.1/unreleased/tree.json rename to data_output/nextstrain/mpox/lineage-b.1/2024-04-19--07-50-39Z/tree.json