From 0b648d642e28140e349b396952a6790037878dbf Mon Sep 17 00:00:00 2001 From: Jennifer Chang Date: Tue, 12 Mar 2024 15:23:11 -0700 Subject: [PATCH] fixup docs: "defaults/config.yaml" is always loaded by default Update ingest README to reflect that change. Co-authored-by: Jover Lee --- ingest/README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/ingest/README.md b/ingest/README.md index 0e8ad81..3a1c5a3 100644 --- a/ingest/README.md +++ b/ingest/README.md @@ -31,7 +31,7 @@ This will produce two files (within the `ingest` directory): Run the complete ingest pipeline and upload results to AWS S3 with ```sh -nextstrain build . --configfiles defaults/config.yaml build-defaults/nextstrain-automation/config.yaml +nextstrain build . --configfiles build-defaults/nextstrain-automation/config.yaml ``` ### Adding new sequences not from GenBank