From 267e72d19ea6d0b7418941901e12bf3c3c72b637 Mon Sep 17 00:00:00 2001
From: Jover Lee <joverlee521@gmail.com>
Date: Thu, 18 Apr 2024 15:08:48 -0700
Subject: [PATCH] phylogenetic.yaml: Simplify config override logic

Co-authored-by: Victor Lin <13424970+victorlin@users.noreply.github.com>
---
 .github/workflows/phylogenetic.yaml | 23 +++++++++++------------
 1 file changed, 11 insertions(+), 12 deletions(-)

diff --git a/.github/workflows/phylogenetic.yaml b/.github/workflows/phylogenetic.yaml
index 857b021..04901b7 100644
--- a/.github/workflows/phylogenetic.yaml
+++ b/.github/workflows/phylogenetic.yaml
@@ -55,22 +55,21 @@ jobs:
           METADATA_URL: ${{ inputs.metadata_url }}
         run: |
           config=""
-          if [[ "$TRIAL_NAME" || "$SEQUENCES_URL" || "$METADATA_URL" ]]; then
 
-            config+="--config"
-
-            if [[ "$TRIAL_NAME" ]]; then
-              config+=" deploy_url='s3://nextstrain-staging/zika_trials_"$TRIAL_NAME"_'"
-            fi
+          if [[ "$TRIAL_NAME" ]]; then
+            config+=" deploy_url='s3://nextstrain-staging/zika_trials_"$TRIAL_NAME"_'"
+          fi
 
-            if [[ "$SEQUENCES_URL" ]]; then
-              config+=" sequences_url='"$SEQUENCES_URL"'"
-            fi
+          if [[ "$SEQUENCES_URL" ]]; then
+            config+=" sequences_url='"$SEQUENCES_URL"'"
+          fi
 
-            if [[ "$METADATA_URL" ]]; then
-              config+=" metadata_url='"$METADATA_URL"'"
-            fi
+          if [[ "$METADATA_URL" ]]; then
+            config+=" metadata_url='"$METADATA_URL"'"
+          fi
 
+          if [[ $config ]]; then
+            config="--config $config"
           fi
 
           echo "config=$config" >> "$GITHUB_OUTPUT"