From 960418c2c97ef56ea52f5ddf7eac0a3d569ed867 Mon Sep 17 00:00:00 2001 From: Jover Lee Date: Wed, 28 Feb 2024 15:09:18 -0800 Subject: [PATCH] ingest: Fix field_map config I noticed that the `institution` column was empty in the results/metadata.tsv when I was running through the workflow for the ingest tutorial. --- ingest/config/defaults.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/ingest/config/defaults.yaml b/ingest/config/defaults.yaml index 10ada38..ae46026 100644 --- a/ingest/config/defaults.yaml +++ b/ingest/config/defaults.yaml @@ -57,7 +57,7 @@ curate: update-date: update_date sra-accs: sra_accessions submitter-names: authors - submitter-affiliations: institution + submitter-affiliation: institution # Standardized strain name regex # Currently accepts any characters because we do not have a clear standard for strain names across pathogens strain_regex: '^.+$'