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when executed the command: nextflow run nf-core/circrna -profile singularity --genome GRCh37 --igenomes_base $GENOME_BASE_DIR/ref/references --outdir $OUT_DIR --input $SING_DIR/samples.csv -r 151-error-no-genomic-sequence-available-check-g-option-error-in-gffread-command-for-task-nfcore_circrnacircrnaquantificationtranscriptome-error
I ran into the following error,
Caused by:
Failed to pull singularity image
command: singularity pull --name depot.galaxyproject.org-singularity-biocontainers-r-base-4.2.1.img.pulling.1721155479867 https://depot.galaxyproject.org/singularity/biocontainers/r-base:4.2.1 > /dev/null
status : 255
message:
INFO: Downloading network image
FATAL: the requested image was not found
This has already been solved as part of #153. Also the solution for #151 has already been merged via #157, so there is no need for using this outdated revision. Please make sure to use the latest pipeline version.
Description of the bug
when executed the command:
nextflow run nf-core/circrna -profile singularity --genome GRCh37 --igenomes_base $GENOME_BASE_DIR/ref/references --outdir $OUT_DIR --input $SING_DIR/samples.csv -r 151-error-no-genomic-sequence-available-check-g-option-error-in-gffread-command-for-task-nfcore_circrnacircrnaquantificationtranscriptome-error
I ran into the following error,
Caused by:
Failed to pull singularity image
command: singularity pull --name depot.galaxyproject.org-singularity-biocontainers-r-base-4.2.1.img.pulling.1721155479867 https://depot.galaxyproject.org/singularity/biocontainers/r-base:4.2.1 > /dev/null
status : 255
message:
INFO: Downloading network image
FATAL: the requested image was not found
Command used and terminal output
nextflow run nf-core/circrna -profile singularity --genome GRCh37 --igenomes_base $GENONE_BASE_DIR/ref/references --outdir $OUT_DIR --input $SING_DIR/samples.csv -r 151-error-no-genomic-sequence-available-check-g-option-error-in-gffread-command-for-task-nfcore_circrnacircrnaquantificationtranscriptome-error
No response
Relevant files
No response
System information
No response
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