Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Add support for Bismark minimap2 #257

Closed
ewels opened this issue Nov 8, 2022 · 1 comment · May be fixed by #295
Closed

Add support for Bismark minimap2 #257

ewels opened this issue Nov 8, 2022 · 1 comment · May be fixed by #295
Labels
enhancement New feature or request
Milestone
3.0.0

Comments

@ewels
Copy link
Member

ewels commented Nov 8, 2022

Bismark now supports using minimap2 for alignment. We should add another params.aligner option for this.
@ewels ewels added the enhancement New feature or request label Nov 8, 2022
@ewels ewels added this to the 2.3 milestone Nov 28, 2022
@sateeshperi sateeshperi mentioned this issue May 30, 2023
Open
9 tasks
@sateeshperi sateeshperi linked a pull request Jun 1, 2023 that will close this issue
Add Biscuit #295
Open
9 tasks
@sateeshperi sateeshperi removed this from the 2.4 milestone Jun 1, 2023
@edmundmiller edmundmiller added this to the 3.0.0 milestone Aug 25, 2023
@sateeshperi
Copy link
Contributor

closing in favor of #455

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
enhancement New feature or request
Projects
None yet
Milestone
3.0.0
Development

Successfully merging a pull request may close this issue.

Add Biscuit njspix/methylseq
3 participants
@ewels @edmundmiller @sateeshperi