nf-core/mhcquant v1.5.1 "Flying Fish"

Bugfix release:

• optimal cluster configuration
• fixed duplication of ids/mixing of channels

nf-core/mhcquant v1.5 "Flying Fish"

• raise OpenMS version to 2.5
• adapt workflow accordingly with new options
• integrate sample, allele and vcf sheets instead of file dirs
• remove specifying input as file directorys eg. "data/*.mzML"
• branched mzML/raw input
• introduce param to skip quantification

nf-core/mhcquant V1.4 "Blue Kingfisher"

Template Update
Raw File Reading
Quantification FDR
Retention Time Prediction
MHCFlurry, MHCNugget, Percolator version increase

nf-core/mhcquant V1.3 "Red Perrot"

Merge pull request #74 from nf-core/dev

Release 1.3

nf-core/mhcquant V1.2.6 "Golden Eagle"

v1.2.6 nf-core/mhcquant "Golden Eagle" - 2019/03/05

Fixed

linear retention time alignment
refine_fdr README

nf-core/mhcquant V1.2.5 "Golden Eagle"

v1.2.5 nf-core/mhcquant "Golden Eagle" - 2019/03/04

Fixed

sort channels by basename
fixed psm-level-fdrs

nf-core/mhcquant V.1.2.4 "Golden Eagle" - 2019/02/06

v1.2.4 nf-core/mhcquant "Golden Eagle" - 2019/02/06
Fixed
fixed refine_fdr_on_predicted_subset float error

nf-core/mhcquant V1.2.3 "Golden Eagle"

v1.2.3 nf-core/mhcquant "Golden Eagle" - 2019/02/02

Fixed
filter out uncommon aminoacids U,X,B,J,Z

nf-core/mhcquant V1.2.2 "Golden Eagle"

v1.2.2 nf-core/mhcquant "Golden Eagle" - 2019/01/28

Fixed

default params to false
change on centroidisation parameter
small changes on docu

nf-core/mhcquant V1.2.1 "Golden Eagle"

v1.2.1 nf-core/mhcquant "Golden Eagle" - 2019/01/24

Fixed

process identical names bug