Align parabricks subworkflow #17401
Triggered via pull request
November 18, 2024 13:32
sateeshperi
Status
Cancelled
Total duration
13m 53s
Artifacts
–
test.yml
on: pull_request
Matrix: nf-test-gpu
Matrix: nf-test
Matrix: nf-core-lint-modules
Matrix: nf-core-lint-modules
Matrix: pytest
confirm-pass
0s
Annotations
5 errors and 5 warnings
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nf-test (subworkflows/nf-core/fastq_align_parabricks, docker_self_hosted)
Process completed with exit code 1.
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nf-test (subworkflows/nf-core/fastq_align_parabricks, singularity)
Process completed with exit code 1.
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nf-test (subworkflows/nf-core/fastq_align_parabricks, conda)
Process completed with exit code 1.
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nf-test (modules/nf-core/trgt/plot, singularity)
Canceling since a higher priority waiting request for 'Run tests-6876' exists
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nf-test (modules/nf-core/trgt/plot, singularity)
The self-hosted runner: ubuntu-2204-x64_i-06f09ab36beb9a6a8 lost communication with the server. Verify the machine is running and has a healthy network connection. Anything in your workflow that terminates the runner process, starves it for CPU/Memory, or blocks its network access can cause this error.
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nf-test (subworkflows/nf-core/fastq_align_parabricks, docker_self_hosted)
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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nf-test (subworkflows/nf-core/fastq_align_parabricks, singularity)
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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nf-test (subworkflows/nf-core/fastq_align_parabricks, conda)
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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nf-test (modules/nf-core/trgt/plot, docker_self_hosted)
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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nf-test (modules/nf-core/trgt/plot, conda)
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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