diff --git a/modules/nf-core/vcf2db/environment.yml b/modules/nf-core/vcf2db/environment.yml index 58c477f9591..037e15309fd 100644 --- a/modules/nf-core/vcf2db/environment.yml +++ b/modules/nf-core/vcf2db/environment.yml @@ -1,5 +1,12 @@ +--- +# yaml-language-server: $schema=https://raw.githubusercontent.com/nf-core/modules/master/modules/environment-schema.json channels: - conda-forge - bioconda dependencies: + # renovate: datasource=conda depName=conda-forge/python + - conda-forge::python=2.7 + # renovate: datasource=conda depName=bioconda/cyvcf2 + - bioconda::cyvcf2=0.20.9 + # renovate: datasource=conda depName=bioconda/vcf2db - bioconda::vcf2db=2020.02.24 diff --git a/modules/nf-core/vcf2db/main.nf b/modules/nf-core/vcf2db/main.nf index 56c26bb6c5f..9e050793e2d 100644 --- a/modules/nf-core/vcf2db/main.nf +++ b/modules/nf-core/vcf2db/main.nf @@ -5,8 +5,8 @@ process VCF2DB { // WARN: Version information not provided by tool on CLI. Please update version string below when bumping container versions. conda "${moduleDir}/environment.yml" container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? - 'https://depot.galaxyproject.org/singularity/vcf2db:2020.02.24--pl5321hdfd78af_3': - 'biocontainers/vcf2db:2020.02.24--pl5321hdfd78af_3' }" + 'https://community-cr-prod.seqera.io/docker/registry/v2/blobs/sha256/14/14d1257c98f789e23a888e2961673b5b98d89e4d03e6a3efba2b1134ed439f61/data': + 'community.wave.seqera.io/library/python_vcf2db:91f604106ada5cf2' }" input: tuple val(meta), path(vcf), path(ped)