Merge branch 'update-busco' of github.com:dialvarezs/nf-core-modules …

…into update-busco
nf-core · Dec 11, 2024 · c44ff08 · c44ff08
2 parents c048d45 + f3184f4
commit c44ff08
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diff --git a/modules/nf-core/busco/busco/main.nf b/modules/nf-core/busco/busco/main.nf
@@ -10,8 +10,8 @@ process BUSCO_BUSCO {
     input:
     tuple val(meta), path(fasta, stageAs:'tmp_input/*')
     val mode                              // Required:    One of genome, proteins, or transcriptome
-    val lineage                           // Required:    lineage to check against, or "auto/auto_prok/auto_euk" to enable auto-lineage 
-    path busco_lineages_path              // Recommended: path to busco lineages - downloads if not set
+    val lineage                           // Required:    lineage for checking against, or "auto/auto_prok/auto_euk" for enabling auto-lineage
+    path busco_lineages_path              // Recommended: busco lineages file - downloads if not set
     path config_file                      // Optional:    busco configuration file
 
     output:

diff --git a/modules/nf-core/busco/busco/meta.yml b/modules/nf-core/busco/busco/meta.yml
@@ -32,7 +32,8 @@ input:
         pattern: "{genome,proteins,transcriptome}"
   - - lineage:
         type: string
-        description: The BUSCO lineage to use, or "auto", "auto_prok" or "auto_euk" to automatically select lineage
+        description: The BUSCO lineage to use, or "auto", "auto_prok" or "auto_euk"
+          to automatically select lineage
   - - busco_lineages_path:
         type: directory
         description: Path to local BUSCO lineages directory.