Update: deseq2/differential for upcoming improved standardisation of …

…template modules (#7178) * Rename deseq_de.R to deseq2_differential.R for standaisation * Update main.nf --------- Co-authored-by: Famke Bäuerle <[email protected]>
nf-core · Dec 10, 2024 · d752b3e · d752b3e
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diff --git a/modules/nf-core/deseq2/differential/main.nf b/modules/nf-core/deseq2/differential/main.nf
@@ -29,7 +29,7 @@ process DESEQ2_DIFFERENTIAL {
     task.ext.when == null || task.ext.when
 
     script:
-    template 'deseq_de.R'
+    template 'deseq2_differential.R'
 
     stub:
     """

diff --git a/.../deseq2/differential/templates/deseq_de.R → ...ferential/templates/deseq2_differential.R b/.../deseq2/differential/templates/deseq_de.R → ...ferential/templates/deseq2_differential.R
-Original file line number
+Diff line change
@@ Expand Up / @@ -29,7 +29,7 @@ process DESEQ2_DIFFERENTIAL { @@
         task.ext.when == null || task.ext.when
         script:
-        template 'deseq_de.R'
+        template 'deseq2_differential.R'
         stub:
         """
@@ Expand Down @@