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use detailed profiles in tests/nf-test.config #7207

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merged 12 commits into from
Dec 13, 2024
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@sateeshperi sateeshperi requested a review from a team as a code owner December 12, 2024 12:42
needs: nf-test-changes
if: ${{ needs.nf-test-changes.outputs.modules != '[]' || needs.nf-test-changes.outputs.subworkflows != '[]' }}
strategy:
fail-fast: false
matrix:
shard: [1, 2]
profile: [docker_self_hosted, singularity] # conda?
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Please add conda. We should exclude the modules that don't use it afterwards, like we do in the normal tests

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most GPU tests wont work with conda

tests/config/nextflow.config Show resolved Hide resolved
@sateeshperi sateeshperi added this pull request to the merge queue Dec 13, 2024
Merged via the queue into master with commit 0810805 Dec 13, 2024
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@sateeshperi sateeshperi deleted the fix-nf-test-config branch December 13, 2024 06:36
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2 participants