diff --git a/conf/modules.config b/conf/modules.config index 956c021..5a63550 100644 --- a/conf/modules.config +++ b/conf/modules.config @@ -39,10 +39,10 @@ process { } withName: "DEEPCELL_MESMER" { - memory = "16GB" - cpus = 8 - ext.args = '--image-mpp=0.138 --nuclear-channel 0 --compartment nuclear' - containerOptions = '--entrypoint ""' + memory = "16GB" + cpus = 8 + ext.args = '--image-mpp=0.138 --nuclear-channel 0 --compartment nuclear' + containerOptions = '--entrypoint ""' } withName: "MCQUANT" { diff --git a/conf/test.config b/conf/test.config index d74ce0e..516d7f2 100644 --- a/conf/test.config +++ b/conf/test.config @@ -15,7 +15,7 @@ params { config_profile_description = 'Minimal test dataset to check pipeline function' // Limit resources so that this can run on GitHub Actions - max_cpus = + max_cpus = 4 max_memory = '16.GB' max_time = '4.h'