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Install separately from star-fusion
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The text was updated successfully, but these errors were encountered:
it does not work for docker either:
ERROR ~ Error executing process > 'FUSIONINSPECTOR (test)' Caused by: Process `FUSIONINSPECTOR (test)` terminated with an error exit status (127) Command executed: FusionInspector \ --fusions fusion_targets.A.txt \ --genome_lib ctat_genome_lib_build_dir \ --left_fq rnaseq_1.fastq.gz --right_fq rnaseq_2.fastq.gz \ --CPU 4 \ -O . \ --out_prefix test \ --vis --STAR_xtra_params "--limitSjdbInsertNsj 1000000" --annotate --examine_coding_effect cat <<-END_VERSIONS > versions.yml "FUSIONINSPECTOR": STAR-Fusion: $(STAR-Fusion --version 2>&1 | grep -i 'version' | sed 's/STAR-Fusion version: //') END_VERSIONS Command exit status: 127 Command output: (empty) Command error: .command.sh: line 9: FusionInspector: command not found
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FUSIONINSPECTOR
rannick
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Description of the bug
Install separately from star-fusion
Command used and terminal output
Relevant files
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System information
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The text was updated successfully, but these errors were encountered: