From 9b62f064d0cb74a01995233079b7ed0bddbcf495 Mon Sep 17 00:00:00 2001
From: Rob Syme <rob.syme@gmail.com>
Date: Thu, 5 Dec 2024 18:55:29 -0500
Subject: [PATCH] Move channel operations outside of the onComplete() block

---
 subworkflows/local/utils_nfcore_rnaseq_pipeline/main.nf | 4 +++-
 1 file changed, 3 insertions(+), 1 deletion(-)

diff --git a/subworkflows/local/utils_nfcore_rnaseq_pipeline/main.nf b/subworkflows/local/utils_nfcore_rnaseq_pipeline/main.nf
index 1745f8be6..5e8820ddc 100644
--- a/subworkflows/local/utils_nfcore_rnaseq_pipeline/main.nf
+++ b/subworkflows/local/utils_nfcore_rnaseq_pipeline/main.nf
@@ -116,6 +116,8 @@ workflow PIPELINE_COMPLETION {
             id, status -> pass_strand_check[id] = status
         }
 
+    def multiqc_report_list = multiqc_report.toList()
+
     //
     // Completion email and summary
     //
@@ -128,7 +130,7 @@ workflow PIPELINE_COMPLETION {
                 plaintext_email,
                 outdir,
                 monochrome_logs,
-                multiqc_report.toList()
+                multiqc_report_list.getVal()
             )
         }