Nextflow stdout:

ERROR ~ Error executing process > 'NFCORE_SCRNASEQ:SCRNASEQ:MTX_CONVERSION:MTX_TO_H5AD (Sample_X)'

Caused by:
  Process `NFCORE_SCRNASEQ:SCRNASEQ:MTX_CONVERSION:MTX_TO_H5AD (Sample_X)` terminated with an error exit status (125)

Command executed:

  # convert file types
  mtx_to_h5ad.py \
      --task_process NFCORE_SCRNASEQ:SCRNASEQ:MTX_CONVERSION:MTX_TO_H5AD \
      --aligner kallisto \
      --sample Sample_X \
      --input *count/counts_unfiltered/*.mtx \
      --barcode *count/counts_unfiltered/*.barcodes.txt \
      --feature *count/counts_unfiltered/*.genes.txt \
      --txp2gene t2g.txt \
      --star_index  \
      --out Sample_X/Sample_X_matrix.h5ad

Command exit status:
  125

Command output:
  (empty)

Command error:
  Unable to find image 'quay.io/biocontainers/scanpy:1.7.2--pyhdfd78af_0' locally
  docker: Error response from daemon: Head "https://quay.io/v2/biocontainers/scanpy/manifests/1.7.2--pyhdfd78af_0": received unexpected HTTP status: 502 Bad Gateway.
  See 'docker run --help'.

Work dir:
  /home/runner/work/scrnaseq/scrnaseq/.nf-test/tests/1dd111b5584086509e90c61f7afc0265/work/55/3bf75cb2d228ec7619375ba29ee89c

Tip: view the complete command output by changing to the process work dir and entering the command `cat .command.out`

 -- Check '/home/runner/work/scrnaseq/scrnaseq/.nf-test/tests/1dd111b5584086509e90c61f7afc0265/meta/nextflow.log' file for details
Nextflow stderr: