0.4.1

• Hotfix release (dependencies and deployment system)

0.4.0

• [ENH] Added an option to choose the degrees of freedom used when doing BOLD to T1w coregistration (--bold2t1w_dof). Set default to 9 to account for field inhomogeneities and coils heating up (#448)
• [ENH] Added support for phase difference and GE style fieldmaps (#448)
• [ENH] Generate GrayWhite, Pial, MidThickness and inflated surfaces (#398)
• [ENH] Memory and performance improvements for calculating the EPI reference (#436)
• [ENH] Sample functional series to subject and fsaverage surfaces (#391)
• [ENH] Output spaces for functional data may be selected with --output-space option (#447)
• [DEP] --skip-native functionality replaced by --output-space (#447)
• [ENH] fmriprep-docker wrapper script simplifies running in a Docker environment (#317)

0.3.2

With thanks to Asier Erramuzpe for contributions.

• [ENH] Added optional slice time correction (#415)
• [ENH] Removed redundant motion parameter conversion step using avscale (#415)
• [ENH] FreeSurfer submillimeter reconstruction may be disabled with --no-submm-recon (#422)
• [ENH] Switch bbregister init from fsl to coreg (FreeSurfer native #423)
• [ENH] Motion estimation now uses a smart reference image that takes advantage of T1 saturation (#421)
• [FIX] Fix report generation with --reports-only (#427)

0.3.1

• [ENH] Perform bias field correction of EPI images prior to coregistration (#409)
• [FIX] Fixed an orientation issue affecting some datasets when bbregister was used (#408)

0.3.0

• [FIX] Affine and warp MNI transforms are now applied in the correct order
• [ENH] Added preliminary support for reconstruction of cortical surfaces using FreeSurfer
• [ENH] Switched to bbregister for BOLD to T1 coregistration
• [ENH] Switched to sinc interpolation of preprocessed BOLD and T1w outputs
• [ENH] Preprocessed BOLD volumes are now saved in the T1w space instead of mean BOLD
• [FIX] Fixed a bug with MCFLIRT interpolation inducing slow drift
• [ENH] All files are now saved in Float32 instead of Float64 to save space

0.2.0

First release intended for public use.