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modules.json
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modules.json
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{
"name": "nf-core/phaseimpute",
"homePage": "https://github.com/nf-core/phaseimpute",
"repos": {
"https://github.com/nf-core/modules.git": {
"modules": {
"nf-core": {
"bcftools/annotate": {
"branch": "master",
"git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
"installed_by": ["modules"]
},
"bcftools/index": {
"branch": "master",
"git_sha": "44096c08ffdbc694f5f92ae174ea0f7ba0f37e09",
"installed_by": ["multiple_impute_glimpse2", "vcf_impute_glimpse", "vcf_phase_shapeit5"]
},
"bcftools/norm": {
"branch": "master",
"git_sha": "0435e4eebc94e53721c194b2d5d06f455a79e407",
"installed_by": ["modules"]
},
"bcftools/query": {
"branch": "master",
"git_sha": "b5cc8edd887e27c51a48387e34549d4405d9769f",
"installed_by": ["modules"]
},
"bcftools/view": {
"branch": "master",
"git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
"installed_by": ["modules"]
},
"bedtools/makewindows": {
"branch": "master",
"git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
"installed_by": ["vcf_phase_shapeit5"]
},
"custom/dumpsoftwareversions": {
"branch": "master",
"git_sha": "05c280924b6c768d484c7c443dad5e605c4ff4b4",
"installed_by": ["modules"]
},
"fastqc": {
"branch": "master",
"git_sha": "9a4517e720bc812e95b56d23d15a1653b6db4f53",
"installed_by": ["modules"]
},
"glimpse/chunk": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["vcf_impute_glimpse"]
},
"glimpse/ligate": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["vcf_impute_glimpse"]
},
"glimpse/phase": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["vcf_impute_glimpse"]
},
"glimpse2/chunk": {
"branch": "master",
"git_sha": "36cfa4c2a7e538832c50f40cb16d159e84cd3305",
"installed_by": ["multiple_impute_glimpse2"]
},
"glimpse2/ligate": {
"branch": "master",
"git_sha": "36cfa4c2a7e538832c50f40cb16d159e84cd3305",
"installed_by": ["multiple_impute_glimpse2"]
},
"glimpse2/phase": {
"branch": "master",
"git_sha": "36cfa4c2a7e538832c50f40cb16d159e84cd3305",
"installed_by": ["multiple_impute_glimpse2"]
},
"glimpse2/splitreference": {
"branch": "master",
"git_sha": "36cfa4c2a7e538832c50f40cb16d159e84cd3305",
"installed_by": ["multiple_impute_glimpse2"]
},
"multiqc": {
"branch": "master",
"git_sha": "b7ebe95761cd389603f9cc0e0dc384c0f663815a",
"installed_by": ["modules"]
},
"samtools/coverage": {
"branch": "master",
"git_sha": "2fe9363ae3b3ab1c79f43dae9b1a4074694c57d6",
"installed_by": ["modules"]
},
"samtools/faidx": {
"branch": "master",
"git_sha": "fd742419940e01ba1c5ecb172c3e32ec840662fe",
"installed_by": ["modules"]
},
"samtools/index": {
"branch": "master",
"git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
"installed_by": ["modules"]
},
"samtools/view": {
"branch": "master",
"git_sha": "3ffae3598260a99e8db3207dead9f73f87f90d1f",
"installed_by": ["modules"],
"patch": "modules/nf-core/samtools/view/samtools-view.diff"
},
"shapeit5/ligate": {
"branch": "master",
"git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
"installed_by": ["vcf_phase_shapeit5"]
},
"shapeit5/phasecommon": {
"branch": "master",
"git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
"installed_by": ["vcf_phase_shapeit5"]
},
"tabix/bgzip": {
"branch": "master",
"git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
"installed_by": ["modules"]
},
"tabix/tabix": {
"branch": "master",
"git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
"installed_by": ["modules"]
}
}
},
"subworkflows": {
"nf-core": {
"multiple_impute_glimpse2": {
"branch": "master",
"git_sha": "dedc0e31087f3306101c38835d051bf49789445a",
"installed_by": ["subworkflows"]
},
"utils_nextflow_pipeline": {
"branch": "master",
"git_sha": "5caf7640a9ef1d18d765d55339be751bb0969dfa",
"installed_by": ["subworkflows"]
},
"utils_nfcore_pipeline": {
"branch": "master",
"git_sha": "5caf7640a9ef1d18d765d55339be751bb0969dfa",
"installed_by": ["subworkflows"]
},
"utils_nfvalidation_plugin": {
"branch": "master",
"git_sha": "5caf7640a9ef1d18d765d55339be751bb0969dfa",
"installed_by": ["subworkflows"]
},
"vcf_impute_glimpse": {
"branch": "master",
"git_sha": "8dab3bf2aaa912730419080e96d2a7d98911db48",
"installed_by": ["subworkflows"]
},
"vcf_phase_shapeit5": {
"branch": "master",
"git_sha": "dedc0e31087f3306101c38835d051bf49789445a",
"installed_by": ["subworkflows"]
}
}
}
}
}
}