pyproject.toml

[build-system]
requires = [
    "Cython >=3.0",
    "numpy >=2.0,<3",  # packages built with NumPy 2.x work with both 1.x and 2.x
    "pkgconfig",
    "setuptools",
    "wheel",
]
build-backend = "setuptools.build_meta"

[tool.setuptools.packages.find]
include = ["bbi*"]

[project]
name = "pybbi"
description = "Python bindings to the UCSC source for Big Binary Indexed (bigWig/bigBed) files."
requires-python = ">=3.7"
license = {text = "MIT"}
authors = [
  {name = "Nezar Abdennur", email = "nabdennur@gmail.com"},
]
keywords = [
    "genomics",
    "bioinformatics",
    "bigwig",
    "bigbed",
    "bigbinaryindexed",
    "bbi",
    "ucsc",
]
classifiers = [
    "Development Status :: 4 - Beta",
    "License :: OSI Approved :: MIT License",
    "Operating System :: POSIX",
    "Operating System :: Unix",
    "Operating System :: MacOS",
    "Topic :: Scientific/Engineering :: Bio-Informatics",
    "Programming Language :: Python",
    "Programming Language :: Python :: 3",
    "Programming Language :: Python :: 3.9",
    "Programming Language :: Python :: 3.10",
    "Programming Language :: Python :: 3.11",
    "Programming Language :: Python :: 3.12",
    "Programming Language :: Python :: 3.13",
]

dependencies = [
    "numpy",
]

dynamic = ["version", "readme"]

[tool.setuptools.dynamic]
version = {attr = "bbi.__version__"}
readme = {file = ["README.md"], content-type = "text/markdown"}

[project.optional-dependencies]
test = [
    'pytest',
    'pandas'
]

[project.urls]
homepage = "https://github.com/nvictus/pybbi"
documentation = "https://github.com/nvictus/pybbi#README.md"
repository = "https://github.com/nvictus/pybbi"


[tool.cibuildwheel]
build = ["cp39-*", "cp310-*", "cp311-*", "cp312-*", "cp313-*"]
skip = "*-musllinux*"
build-verbosity = 3

[tool.cibuildwheel.linux]
archs = ["x86_64", "aarch64"]
before-all = "yum install -y gcc make zlib-devel openssl-devel libpng-devel"

[tool.cibuildwheel.macos]
archs = ["auto"]  # "arm64" needs M1 runner on GitHub Actions
before-all = """
brew install pkg-config openssl libpng  # -> /usr/local (x86_64)
"""