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teaching.html
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<title>obigriffith.org: teaching</title>
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<div id="masthead">
<h1 align="left" id="siteName"><a href="index.html" target="_self">obigriffith.org</a></h1>
<div id="globalNav">
<a href="index.html">home</a>| <a href="research.html"> research</a>| <a href="funding.html"> funding</a>| <a href="publications.html">publications</a>| <a href="teaching.html">teaching</a>| <a href="CV.html">CV</a>| <a href="contact.html">contact</a></div>
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<h1>Teaching</h1>
<p>I am currently an instructor for the <a href="http://meetings.cshl.edu/courses.aspx?course=C-SEQTEC&year=17">Advanced Sequencing Technologies & Applications course at CSHL</a>. I also instruct workshops on RNA-seq analysis for the <a href="http://bioinformatics.ca/">Canadian Bioinformatics Workshops</a> (CBW) series. I have helped created an online wiki resource at github for demonstrating RNA sequence analysis on the cloud (<a href="http://www.rnaseq.wiki">www.rnaseq.wiki</a>). I am also <a href="https://www.biostars.org/u/3737/">active</a> on the <a href="https://www.biostars.org">Biostars bioinformatics forum</a>. I have guest lectured for Special Topics in Molecular Genetics: Molecular Basis of Cancer (BIO5288), Genetics and Genomics of Disease (BIO5487) and Human Linkage and Association (M21-5483/L41-5483) at Washington University School of Medicine. In the past I have also been a TA for the 'Genomics' and 'Informatics on High Throughput Sequencing Data' courses at CBW. I was a TA for Genome Analysis (MEDG505) and the bioinformatics section of Advanced Human Molecular Genetics (MEDG520) and a guest instructor for Cell Biology For Biomedical Engineering Graduate Students (APSC552), Cell and Organismal Biology (BIOL111) and Cell Biology (BIOL200) at UBC. In the past I have offered services as a tutor for high school and university students. </p>
<p><a href="http://bioinformatics.ca/"><img src="images/cbw-horizontal.jpg" width="600" height="84"></a></p>
</div>
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<div id="navBar">
<div class="relatedLinks">
<h3>Research</h3>
<ul>
<li><a href="http://genome.wustl.edu/" target="_top">MGI</a></li>
<li><a href="http://www.lbl.gov" target="_top">LBNL</a></li>
<li><a href="http://www.bcgsc.ca" target="_top">GSC</a></li>
<li><a href="http://civicdb.org" target="_top">CIViC</a></li>
<li><a href="http://docm.info" target="_top">DoCM</a></li>
<li><a href="http://dgidb.org" target="_top">DGIdb</a></li>
<li><a href="https://www.synapse.org/#!Synapse:syn2179898" target="_top">Rtoolbox</a></li>
<li><a href="http://www.AlexaPlatform.org" target="_top">ALEXA</a></li>
<li><a href="http://www.oreganno.org" target="_top">ORegAnno</a></li>
<li><a href="http://www.cisred.org" target="_top">cisRED</a></li>
<li><a href="http://www.bcgsc.ca/platform/bioinfo/ge/thyroid/" target="_top">thyroid cancer</a></li>
<li><a href="http://www.bcgsc.ca/platform/bioinfo/ge/kiwi" target="_top">subspace clustering</a></li>
<li><a href="http://www.bcgsc.ca/gc/bomge/coexpression/" target="_top">coexpression</a></li>
</ul>
</div>
<div class="relatedLinks">
<h3>Colleagues</h3>
<ul>
<li><a href="http://www.malachigriffith.org/">Malachi Griffith</a></li>
<li><a href="https://www.linkedin.com/in/bgood/">Benjamin Good</a></li>
<li><a href="http://cs.txstate.edu/~jg66/">Byron Gao</a></li>
<li><a href="http://montgomerylab.stanford.edu/index.html">Stephen Montgomery</a></li>
<li><a href="http://www.linkedin.com/in/anneleendaemen">Anneleen Daemen</a></li>
<li><a href="https://www.ohsu.edu/xd/education/schools/school-of-medicine/departments/basic-science-departments/biomedical-engineering/people/laura-heiser.cfm">Laura Heiser</a></li>
<li><a href="https://www.linkedin.com/in/richard-k-wilson-ph-d-4a6a5a8/">Rick Wilson</a></li>
<li><a href="https://cancer.osu.edu/research-and-education/find-a-researcher/search-researcher-directory/elaine-r-mardis">Elaine Mardis</a></li>
<li><a href="https://www.bcm.edu/research/labs/matthew-ellis">Matthew Ellis</a></li>
<li><a href="http://oncology.wustl.edu/people/faculty/Fehniger/Fehniger_Bio.html">Todd Fehniger</a></li>
<li><a href="http://oncology.wustl.edu/people/faculty/Ley/Ley_Bio.html">Tim Ley</a></li>
<li><a href="http://www.dfhcc.harvard.edu/insider/member-detail/member/ravindra-uppaluri-md-phd/">Ravindra Uppaluri</a></li>
<li><a href="http://sulab.org/andrew-i-su-ph-d/">Andrew Su</a></li>
<li><a href="http://genome.wustl.edu/people/individual/chris-miller/">Chris Miller</a></li>
<li><a href="http://oncology.wustl.edu/people/faculty/Maher/Maher_Bio.html">Chris Maher</a></li>
<li><a href="http://www.ohsu.edu/xd/education/schools/school-of-medicine/departments/basic-science-departments/biomedical-engineering/people/joe-gray.cfm">Joe Gray</a></li>
<li><a href="http://www.ohsu.edu/xd/education/schools/school-of-medicine/departments/basic-science-departments/molecular-and-medical-genetics/people/primary-faculty/paul-spellman.cfm">Paul Spellman</a></li>
<li><a href="http://www.bcgsc.ca/faculty/sjones">Steve Jones</a></li>
<li><a href="http://surgery.med.ubc.ca/people/s-m-wiseman/">Sam Wiseman</a></li>
</ul>
</div>
<div class="relatedLinks">
<h3>Favourites</h3>
<ul>
<li><a href="http://bioinformatics.ca/" target="_top">Canadian Bioinformatics Workshops</a></li>
<li><a href="http://www.biostars.org/" target="_top">BioStars</a></li>
<li><a href="http://www.codecademy.com/" target="_top">Codecademy</a></li>
</ul>
</div>
</div>
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