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    28 repositories

    • fraser-lab.github.io

      Public
      Fraser Lab website
      HTML
      •
      MIT License
      •137•37•15•0•Updated Dec 20, 2024Dec 20, 2024

    • ADP3D-ensemble

      Public
      Extending the results of Levy et al. 2024 to sample protein conformational ensembles.
      Python
      •
      MIT License
      •0•0•0•0•Updated Dec 17, 2024Dec 17, 2024

    • MET_kinase_Inhibitor_DMS

      Public
      Source code for the MET kinase domain inhibitor DMS
      R
      •
      MIT License
      •0•1•0•0•Updated Jul 19, 2024Jul 19, 2024

    • qFit_biological_testset

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Jul 15, 2024Jul 15, 2024

    • MET_KinaseDomain_DMS

      Public
      DMS fitness scores and analysis for the MET kinase domain
      R
      •
      MIT License
      •0•2•0•0•Updated Sep 16, 2023Sep 16, 2023

    • EMRingerWeb

      Public
      Web server for EMRinger
      JavaScript
      •0•0•1•2•Updated May 1, 2023May 1, 2023

    • Apo_Holo_Analysis

      Public
      Scripts for paper on Apo/Holo Pairs
      Shell
      •0•8•0•0•Updated Sep 15, 2022Sep 15, 2022

    • VatA_enrich2

      Public
      Python
      •0•0•0•0•Updated Aug 20, 2022Aug 20, 2022

    • curiosity

      Public
      cctbx-based tool for discovery of interesting features in electron density or electrostatic potential maps
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•0•0•0•Updated Mar 31, 2022Mar 31, 2022

    • holton_scripts

      Public
      Shell
      •
      BSD 3-Clause "New" or "Revised" License
      •1•0•1•0•Updated Aug 9, 2021Aug 9, 2021

    • qptm

      Public
      quantification of posttranscriptional modifications
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•4•0•0•Updated Jan 23, 2021Jan 23, 2021

    • fraser-lab.github.io-archive

      Public
      HTML
      •
      MIT License
      •0•0•0•0•Updated Nov 25, 2020Nov 25, 2020

    • streptogramin

      Public
      Python
      •0•0•0•0•Updated May 21, 2020May 21, 2020

    • echo_pregui_scripts

      Public
      JF lab - Pregui Scripts for Echo users
      Python
      •1•0•0•0•Updated Apr 14, 2020Apr 14, 2020

    • QCRG_COVID19_Figures

      Public
      gnomAD/gTex Figure creation
      Python
      •1•0•0•0•Updated Mar 26, 2020Mar 26, 2020

    • EMRinger

      Public
      Scripts to run EMRinger, as well as the scripts to generate the EMRinger manuscript figures.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•6•0•0•Updated Mar 26, 2020Mar 26, 2020

    • solution_scattering

      Public
      Data analysis for solution scattering experiments.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •5•1•0•0•Updated Jan 27, 2020Jan 27, 2020

    • TR_crystallography

      Public
      Code for analyzing time-resolved crystallography experiments
      Python
      •1•0•0•0•Updated Jan 24, 2020Jan 24, 2020

    • chitin_analysis

      Public
      Analysis for Barad et al. 2019
      Python
      •0•0•0•0•Updated Jan 19, 2020Jan 19, 2020

    • xray_thermometer

      Public
      Water-ring-based X-ray thermometer
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•0•0•0•Updated Sep 19, 2019Sep 19, 2019

    • relax

      Public
      Tool for calculation of relaxation kinetics
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Sep 10, 2019Sep 10, 2019

    • plumed_em_md

      Public
      C
      •
      MIT License
      •2•4•0•0•Updated Aug 29, 2018Aug 29, 2018

    • ROSETTA_EM_REFINEMENT

      Public
      Scripts for EM Refinement in Rosetta
      Python
      •
      MIT License
      •0•4•0•0•Updated Jul 23, 2018Jul 23, 2018

    • xds_iter

      Public
      Identifies the resolution cutoff of an X-ray dataset by running XDS until user-specified criteria are met
      Python
      •
      MIT License
      •1•0•0•0•Updated May 29, 2018May 29, 2018

    • diffuse_scattering

      Public
      Isolate & Analyze Diffuse Scattering in X-ray Diffraction Images
      Python
      •0•1•1•0•Updated Jan 23, 2018Jan 23, 2018

    • PUBS

      Public
      Python
      •0•0•0•0•Updated May 15, 2017May 15, 2017

    • phenix_diffuse

      Public
      Diffuse scattering calculations for PHENIX package
      Python
      •2•0•0•0•Updated Oct 11, 2016Oct 11, 2016

    • PUBS2014

      Public
      PUBS
      Python
      •0•1•0•0•Updated Mar 11, 2016Mar 11, 2016