runConfig.txt

omp threads
-1
simBox xlow ylow zlow  xhigh yhigh zhigh
0 0 0 15.0 15.0 15.0
xyz periodic (not implemented yet)
0 0 0
sphereRadius LogNormal distribution (average, sigma < 0 for same radius)
1.0 -0.3
sphere collision Radius ratio (radius*ratio=collision radius)
1.001
viscosity (pN/(um^2) s)
0.001
kBT (pN * um)
0.00411
External Force and Torque (pN)
0.0 0.0 -1.0 0.0 0.0 0.0
sphereNumber
100
dt (s)
0.00001
timeTotal (s)
0.01
snapFreq (int)
1
RngSeed
6
Monolayer (>0 for true, <=0 for false, default to be true)
0
Hydrodynamics (>0 for true, <=0 for false, default to be true)
1
Spherical Harmonics order p (larger than 3, recommend 6~14)
12
FMM multipole order p (even number between 6 and 16, recommend 10)
10
Brownian Scale (scale by this float number. 0=no Brown. default = 1, non-negative)
0.0
Stokes Regularization Parameter (fraction of half fiber length, no effect)
0.02
Dump Flow (>0 for true, <0 for false )
0
Dump Flow Mesh size (suggest boxsize / 100)
4.0
Spherical Shell (>0 for true. With free boundary only, no effect on hydro)
0
LCP tol
0.00001