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make samples type array and nest under items #204 #779

make samples type array and nest under items #204

make samples type array and nest under items #204 #779

Workflow file for this run

name: Run pytests
on:
push:
branches: [master, dev]
pull_request:
branches: [master, dev]
workflow_dispatch:
inputs: null
jobs:
pytest:
strategy:
matrix:
python-version: ["3.8", "3.11"]
os: [ubuntu-latest] # can't use macOS when using service containers or container jobs
runs-on: ${{ matrix.os }}
services:
postgres:
image: postgres
env: # needs to match DB config in: ../../tests/data/config.yaml
POSTGRES_USER: postgres
POSTGRES_PASSWORD: pipestat-password
POSTGRES_DB: pipestat-test
ports:
- 5432:5432
options: --health-cmd pg_isready --health-interval 10s --health-timeout 5s --health-retries 5
steps:
- uses: actions/checkout@v2
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v2
with:
python-version: ${{ matrix.python-version }}
- name: Install dev dependencies
run: if [ -f requirements/requirements-dev.txt ]; then pip install -r requirements/requirements-dev.txt; fi
- name: Install test dependencies
run: if [ -f requirements/requirements-test.txt ]; then pip install -r requirements/requirements-test.txt; fi
- name: Install backend dependencies
run: if [ -f requirements/requirements-db-backend.txt ]; then pip install -r requirements/requirements-db-backend.txt; fi
- name: Install pipestat
run: python -m pip install .
- name: Run pytest tests
run: pytest tests -x -vv --cov=./ --cov-report=xml
# - name: Upload coverage to Codecov
# uses: codecov/codecov-action@v1
# with:
# file: ./coverage.xml
# name: py-${{ matrix.python-version }}-${{ matrix.os }}