diff --git a/Dockerfile b/Dockerfile index 3af1d19b..699d26d1 100644 --- a/Dockerfile +++ b/Dockerfile @@ -10,10 +10,11 @@ MAINTAINER Kendell Clement RUN apt-get update && apt-get install gcc g++ bowtie2 samtools libsys-hostname-long-perl \ -y --no-install-recommends \ && apt-get clean \ + && apt-get autoremove -y \ && rm -rf /var/lib/apt/lists/* \ && rm -rf /usr/share/man/* \ && rm -rf /usr/share/doc/* \ - && conda install -c defaults -c conda-forge -c bioconda -y -n base --debug -c bioconda trimmomatic flash numpy cython jinja2 tbb=2020.2 pyparsing=2.3.1 scipy matplotlib pandas plotly\ + && conda install -c defaults -c conda-forge -c bioconda -y -n base --debug trimmomatic flash numpy cython jinja2 tbb=2020.2 pyparsing=2.3.1 scipy matplotlib-base pandas plotly\ && conda clean --all --yes #install ms fonts @@ -40,4 +41,4 @@ RUN python setup.py install \ && CRISPRessoCompare -h -ENTRYPOINT ["python","/CRISPResso2/CRISPResso2_router.py"] +ENTRYPOINT ["python","/CRISPResso2/CRISPResso2_router.py"] \ No newline at end of file