-
Notifications
You must be signed in to change notification settings - Fork 0
/
celseq2_bc384-v4.csv
We can make this file beautiful and searchable if this error is corrected: It looks like row 7 should actually have 1 column, instead of 2 in line 6.
397 lines (397 loc) · 5.46 KB
/
celseq2_bc384-v4.csv
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
## comments and empty lines in this file are ignored. Two columns
## (space or tab-delimited) specify the barcode id and the bardcode
## itself. A lower case letter in the barcode means: this letter must
## *always* be exact. This can be used if some barcodes are not
## different enough from the other to allow a fixed number of
## mismatches. The current version fixes problems with insufficient
## edit distance in the previous versions, and is safe to use while
## allowing for a one nucleotide mismatch.
##
## The IDs of the barcodes are those of the wells, counting by row
## (i.e. A1-A24, B1-B24, ... , P1-P24) version v3 of this file uses
## sequential names (c1-c384), but is otherwise identical.
## Philip Lijnzaad, 31jan2017
A1 CGTCTAAT
A2 AGACTCGT
A3 GCACGTCA
A4 TCAACGAC
A5 ATTTAGCG
A6 AtACAGaC
A7 TGCGTAGG
A8 TGGAGCTC
A9 TGAATACC
A10 TCTCACAC
A11 TACTGgTa
A12 ACGATAGG
A13 GATGTCGA
A14 TTACGGGT
A15 CACAGCAT
A16 CttTGACA
A17 CCTTCAAG
A18 GAGTCCTG
A19 CACACTGA
A20 GTTACAGG
A21 GGACCTTT
A22 TTCCGTTC
A23 ACTGTTTG
A24 AAGTGGCT
B1 CTGTACAA
B2 CGCAAAGT
B3 GTGCATGA
B4 GTCATTAG
B5 AGCTCCTT
B6 TCACCCGA
B7 GTTGCCAC
B8 TGTACCAA
B9 AACGAGGT
B10 AGCCACCA
B11 gGTAATCa
B12 CCAGTCCA
B13 ACCTCAGC
B14 GGTGGACT
B15 GACAAACC
B16 TAACTCCG
B17 ACACCGTG
B18 gTAGaACG
B19 GGATTGAC
B20 ACGTATCC
B21 TTCGGAAA
B22 AGTTGTGT
B23 AAGCACAT
B24 CTGTCATT
C1 GTCCTATA
C2 CTACGCTG
C3 GGGATTGT
C4 TGATGTAG
C5 TTCGCTGT
C6 GAAGACTT
C7 TCTGGGCA
C8 CAACTAGA
C9 CCATGGGA
C10 ATGCGACG
C11 GAGGGTAG
C12 CGGGTGAA
C13 GCCATCTT
C14 GCATAATC
C15 TCTATGGT
C16 AGGACTTA
C17 CGTGATTC
C18 ACTAGCGA
C19 GtAACTcC
C20 CGGAAGTG
C21 CCGAGTAC
C22 GACGCAAT
C23 ACCTGGAG
C24 CATGGGTT
D1 ATTCCTAG
D2 aAtCatGC
D3 GCTTCCCT
D4 AGGTAAAG
D5 CCACAACT
D6 ACAGGCAT
D7 TTTGTGTC
D8 TGAGCATA
D9 TTAGACGC
D10 CGCTTGCT
D11 AGTCTGCC
D12 CatAgTcG
D13 TctTGCTG
D14 GGGACAAC
D15 ATATTCCC
D16 TGTTAAGC
D17 TACGCCTC
D18 CACTTATC
D19 ACCGCTAA
D20 TAAGGTCC
D21 GAAAGGTG
D22 ACGTTGTA
D23 GCAGAGAA
D24 GCATTTGG
E1 TAGTGTGC
E2 tACAaGGG
E3 GGActAct
E4 tCCCTAgA
E5 ATGAGCAG
E6 TacTGctg
E7 CtgACTGT
E8 caGcGAtT
E9 GTTCGCTA
E10 caTcTCac
E11 TCTGCCTA
E12 CtGgCTAA
E13 gATtGctC
E14 GGgTtATG
E15 CTTCGTAC
E16 GaAACTgC
E17 TACCaGaC
E18 ttgcaACC
E19 tTAGgacG
E20 TATCCACG
E21 TCtaGAGG
E22 CAGATcGt
E23 ATGtGCgT
E24 AagTCTcG
F1 CTAGCAAC
F2 ttcctACC
F3 TccTAGCT
F4 GgTtCTGA
F5 ACGTACTG
F6 GTGAacTC
F7 GgcGATtT
F8 AAtCgGcA
F9 GCGTATAG
F10 ccGaTtCT
F11 CtATAgGC
F12 cTtGTGCA
F13 CagTgacA
F14 AcGcTCtt
F15 AtaGgagC
F16 GTTctGct
F17 TAGAcGcT
F18 CGTAtcAG
F19 ttGTTccG
F20 tAgGTCAc
F21 ATACACGG
F22 CgAGAAtG
F23 CGCTATAG
F24 GTATCGct
G1 CGgtgtTT
G2 CAAgGTGt
G3 AGAACCAC
G4 AAgctGCa
G5 ACGGATGT
G6 AGTgGGAt
G7 aGGgACAA
G8 gTgtaACC
G9 CAAGAGAC
G10 GTcCGTAa
G11 TGGtTgTC
G12 AggCATCT
G13 GTCtAcCT
G14 GtTcAGTG
G15 GCCACAAA
G16 GAGAacGA
G17 GcTGTAaC
G18 TCAGCTTG
G19 tTcCCTCA
G20 TCGACTCA
G21 gtgatgtc
G22 ATCGGTTG
G23 CcAtTTCC
G24 CTGAAGGA
H1 GAGTctGT
H2 tCgccaTt
H3 CGGTAaTc
H4 CCTgaCAA
H5 aAGAcAGC
H6 TGCGgtAT
H7 tATCtcgC
H8 TTCACGTG
H9 cCCCtATT
H10 tATCctGc
H11 CCtTcGTA
H12 CAaaGTgg
H13 GTCTcACa
H14 cAGaTAcC
H15 CcTaCACA
H16 aGCAgAAC
H17 TTTGAGGG
H18 AaaCAggC
H19 tGATcctc
H20 GaGAAGAg
H21 cgTAaTCg
H22 CGAAtGCa
H23 tGAaAGcg
H24 CgtAgaAG
I1 CcAGAAaG
I2 CTTACGAC
I3 CCGCATTT
I4 aCGaTccT
I5 AGGATGGA
I6 TCGGTTGA
I7 TCTGTGAG
I8 ACCACGAT
I9 GGCTCTAT
I10 TACTGCac
I11 cAtgTCAC
I12 AAGgaGCA
I13 AACCGCTT
I14 CAACCATG
I15 AGAACAGG
I16 TAAGCCGT
I17 GATGCTCT
I18 CtAgTTCC
I19 GATCACCT
I20 GATCGAAG
I21 GCTTCTTC
I22 TGGTGAGT
I23 CACTATCC
I24 GTAATCCG
J1 cAGAtagc
J2 CcGtCTAA
J3 TACCtGtC
J4 TATTCGGG
J5 GTTGGTGA
J6 tagctACC
J7 GACTTGAG
J8 TTCAGCGT
J9 AcAGaAGC
J10 ACGCGTAA
J11 cATaGCTC
J12 AccCATCT
J13 GCAATCGA
J14 TCCAATCG
J15 TTCTCGGA
J16 TATGACCC
J17 TTCagACC
J18 GAGAgaGA
J19 AtGCTCTg
J20 TGACCAAG
J21 GAGCAAAC
J22 GtCgAtcT
J23 CTCTTTGC
J24 aAGGTCAg
K1 aTgCCTCA
K2 TCCGAACA
K3 CTGCGAAA
K4 TGGgTtTC
K5 CAGTCCAT
K6 CGACTTAC
K7 TCGGAATC
K8 CAGCTTTG
K9 TggTAGCT
K10 TTATCCGG
K11 GCATCAGT
K12 CaATAcGC
K13 TAGGGGAA
K14 GCTTTGGA
K15 TCAGCACT
K16 TGCGtgAT
K17 GTAGTGAG
K18 GTGgTGTa
K19 TCatGAGG
K20 TCCAGCTA
K21 GGaTgATG
K22 AGCACTCT
K23 aAGCGAgT
K24 TGATCtcC
L1 ACAGAGCT
L2 ATAGctGC
L3 TGATtCgC
L4 aTcGTGCA
L5 AGTCAGGA
L6 TTTTCGCC
L7 AGGAGACT
L8 GTTCcGaT
L9 TCGCgATa
L10 GGACgAaT
L11 TCGACAAG
L12 GAACAGCA
L13 GTCCAAAG
L14 CtGcTTCT
L15 aCCCTAcA
L16 TCGtCcTT
L17 GCTAATGG
L18 GGAgTACa
L19 CGGTacTt
L20 AACACGCA
L21 GCAAGAAG
L22 CaTgCACA
L23 GTTCTTGC
L24 AGCGAACT
M1 gTGTTCaG
M2 TCTCGTCT
M3 TACGGTGA
M4 GaTGTAcC
M5 TACCACGA
M6 TCTGGTTC
M7 CcTctCAa
M8 GTATGCAC
M9 GGAGCTAA
M10 aCcCcATT
M11 AgtTCTCG
M12 ACCAAGGA
M13 GTgCGTAt
M14 AGTACGTG
M15 AGAGGTGA
M16 GgGAAGAt
M17 CCAACGTT
M18 GGgGATTT
M19 GGCAACAA
M20 CAGTcAgA
M21 cGAAaGCt
M22 AATGGTGG
M23 tGGcACAA
M24 ATGgGCtT
N1 TGATCGGT
N2 CTGATCAC
N3 CTCGTACT
N4 CTACCGTA
N5 TTGTCCAC
N6 ATtGGAcC
N7 TGAAAGgc
N8 ACATGTGC
N9 cGATCCTa
N10 ATGGCACT
N11 TAGAgGgT
N12 GTATCGtc
N13 CACCATGT
N14 TAGGAACG
N15 TGATGCCA
N16 GAGTtgGT
N17 TGAgAGaG
N18 CCTGTAGA
N19 GGTGTTAG
N20 gTcttACc
N21 AGACAACC
N22 TGGCTTCA
N23 AGCTTCAC
N24 CAGTGtCA
O1 GTtaTGcc
O2 CgaACTGT
O3 gaTcCTGa
O4 CCAGATGA
O5 AAcCTGCt
O6 TATGGAGC
O7 CACTCACT
O8 GGGTAAGA
O9 CAAACGAG
O10 AAAGGCTG
O11 ACAAGGCA
O12 AGTTTCGG
O13 ACCAGTTC
O14 AATAGGGC
O15 AACCCAAC
O16 cGCAtAAC
O17 GTGCTAGT
O18 GGTGACTA
O19 GgTtAGTG
O20 CGAAGCAA
O21 CcGaGATT
O22 CTCTGCTA
O23 TaGTTgCG
O24 AGGCTAAC
P1 ACAAACCG
P2 ATCGACGA
P3 cTcATGTC
P4 CCcTaGTA
P5 CCTTTGAC
P6 TGTGGCTT
P7 GcGATaTC
P8 ACGAACAC
P9 tTGATGgC
P10 aACAtGGG
P11 CTTAGCCT
P12 AAAGCGGA
P13 CAATGGTC
P14 AAcCGGaA
P15 AAcTCTgG
P16 TTAGGcaG
P17 CGtcGTTT
P18 CCTGCTAT
P19 CagAGAAG
P20 GATTGtcC
P21 CACCTCTA
P22 AGTtGGAc
P23 AGTGCAGA
P24 CTCTGTCT