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read the file in as an excel file- do some checking
select the barcode,sample
find the negative and positive
check there aren't duplicates
qc
strip off invisibles that excel will add in
trim whitespace from start and end of every field
if a field is in quotes,
write the file out to the temp folder
make sure to write out all columns to this file (use csv.DictWriter and just write out the fieldnames of the DictReader when parsing the file?). ALso remember to handle line termination.
Perhaps we can allow tsv or csv.
Prepopulated template be able to parse that format
The text was updated successfully, but these errors were encountered:
read the file in as an excel file- do some checking
select the barcode,sample
find the negative and positive
check there aren't duplicates
qc
write the file out to the temp folder
make sure to write out all columns to this file (use csv.DictWriter and just write out the fieldnames of the DictReader when parsing the file?). ALso remember to handle line termination.
Perhaps we can allow tsv or csv.
Prepopulated template be able to parse that format
The text was updated successfully, but these errors were encountered: