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snakemake.yaml
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snakemake.yaml
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name: wg1_snakemake641
channels:
- anaconda
- conda-forge
- bioconda
- r
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=1_llvm
- aioeasywebdav=2.4.0=py36_1000
- aiohttp=3.6.2=py36h516909a_0
- amply=0.1.4=py_0
- appdirs=1.4.3=py_1
- arrow=0.17.0=py36h9f0ad1d_0
- async-timeout=3.0.1=py_1000
- atk=2.36.0=2
- atk-1.0=2.36.0=h516909a_2
- attmap=0.13.2=pyhd8ed1ab_0
- attrs=20.2.0=pyh9f0ad1d_0
- bcrypt=3.2.0=py36h8c4c3a4_0
- binaryornot=0.4.4=py_1
- blas=2.17=openblas
- boto=2.49.0=py36_0
- boto3=1.15.14=pyh9f0ad1d_0
- botocore=1.18.14=pyh9f0ad1d_0
- brotlipy=0.7.0=py36h8c4c3a4_1000
- bzip2=1.0.8=h516909a_3
- c-ares=1.16.1=h516909a_3
- ca-certificates=2022.9.14=ha878542_0
- cachetools=4.1.1=py_0
- cairo=1.16.0=h3fc0475_1005
- certifi=2021.5.30=py36h5fab9bb_0
- cffi=1.14.3=py36h0ff685e_0
- chardet=3.0.4=py36h9f0ad1d_1007
- click=7.1.2=pyh9f0ad1d_0
- coincbc=2.10.5=hab63836_0
- colorama=0.4.5=pyhd8ed1ab_0
- conda=4.10.3=py36h5fab9bb_2
- conda-package-handling=1.7.3=py36h8f6f2f9_0
- configargparse=1.2.3=pyh9f0ad1d_0
- connection_pool=0.0.3=pyhd3deb0d_0
- cookiecutter=1.7.2=pyh9f0ad1d_0
- cryptography=3.1.1=py36h45558ae_0
- datrie=0.8.2=py36h8c4c3a4_0
- decorator=4.4.2=py_0
- docutils=0.16=py36h9f0ad1d_1
- drmaa=0.7.9=py_1000
- dropbox=10.4.1=pyh9f0ad1d_0
- expat=2.2.9=he1b5a44_2
- fftw=3.3.8=nompi_h7f3a6c3_1111
- filechunkio=1.8=py_2
- filelock=3.0.12=py_0
- font-ttf-dejavu-sans-mono=2.37=hab24e00_0
- font-ttf-inconsolata=2.001=hab24e00_0
- font-ttf-source-code-pro=2.030=hab24e00_0
- font-ttf-ubuntu=0.83=hab24e00_0
- fontconfig=2.13.1=h1056068_1002
- fonts-conda-ecosystem=1=0
- fonts-conda-forge=1=0
- freetype=2.10.2=he06d7ca_0
- fribidi=1.0.10=h516909a_0
- ftputil=4.0.0=py_0
- gdk-pixbuf=2.38.2=h3f25603_4
- gettext=0.19.8.1=hc5be6a0_1002
- ghostscript=9.53.3=he1b5a44_0
- giflib=5.2.1=h516909a_2
- gitdb=4.0.5=py_0
- gitpython=3.1.9=py_0
- glib=2.66.1=h680cd38_0
- gobject-introspection=1.66.1=py36h6d43c07_0
- google-api-core=1.22.4=pyh9f0ad1d_0
- google-api-python-client=1.12.3=pyh9f0ad1d_0
- google-auth=1.22.0=py_0
- google-auth-httplib2=0.0.4=pyh9f0ad1d_0
- google-cloud-core=1.4.3=pyh9f0ad1d_0
- google-cloud-storage=1.31.2=pyh9f0ad1d_0
- google-crc32c=1.0.0=py36h9c36872_0
- google-resumable-media=1.1.0=pyh9f0ad1d_0
- googleapis-common-protos=1.52.0=py36h9f0ad1d_0
- graphite2=1.3.13=he1b5a44_1001
- graphviz=2.42.3=h6939c30_1
- grpcio=1.31.0=py36h769ab6c_0
- gtk2=2.24.32=h194ddfc_3
- gts=0.7.6=h08bb679_0
- harfbuzz=2.7.2=hee91db6_0
- httplib2=0.18.1=pyh9f0ad1d_0
- icu=67.1=he1b5a44_0
- idna=2.10=pyh9f0ad1d_0
- idna_ssl=1.1.0=py36_1000
- imagemagick=7.0.10_28=pl526h201ca68_0
- importlib-metadata=2.0.0=py36h9f0ad1d_0
- importlib_metadata=2.0.0=0
- iniconfig=1.1.1=py_0
- ipython_genutils=0.2.0=py_1
- jbig=2.1=h516909a_2002
- jinja2=2.11.2=pyh9f0ad1d_0
- jinja2-time=0.2.0=py_2
- jmespath=0.10.0=pyh9f0ad1d_0
- jpeg=9d=h516909a_0
- jsonschema=3.2.0=py36h9f0ad1d_1
- jupyter_core=4.6.3=py36h9f0ad1d_1
- krb5=1.19.2=hcc1bbae_0
- ld_impl_linux-64=2.35=h769bd43_9
- libarchive=3.5.1=h899b81a_0
- libblas=3.8.0=17_openblas
- libcblas=3.8.0=17_openblas
- libcrc32c=1.1.1=he1b5a44_2
- libcurl=7.78.0=h0b77cf5_0
- libedit=3.1.20191231=he28a2e2_2
- libev=4.33=h516909a_1
- libffi=3.2.1=he1b5a44_1007
- libgcc-ng=9.3.0=h5dbcf3e_17
- libgfortran-ng=7.5.0=hae1eefd_17
- libgfortran4=7.5.0=hae1eefd_17
- libiconv=1.16=h516909a_0
- liblapack=3.8.0=17_openblas
- liblapacke=3.8.0=17_openblas
- libnghttp2=1.41.0=h8cfc5f6_2
- libopenblas=0.3.10=pthreads_hb3c22a3_4
- libpng=1.6.37=hed695b0_2
- libprotobuf=3.13.0=h8b12597_0
- librsvg=2.50.1=h33a7fed_0
- libsodium=1.0.18=h516909a_1
- libsolv=0.7.19=h780b84a_5
- libssh2=1.9.0=ha56f1ee_6
- libstdcxx-ng=9.3.0=h2ae2ef3_17
- libtiff=4.1.0=hc7e4089_6
- libtool=2.4.6=h516909a_1005
- libuuid=2.32.1=h14c3975_1000
- libwebp=1.1.0=h56121f0_4
- libwebp-base=1.1.0=h516909a_3
- libxcb=1.13=h14c3975_1002
- libxml2=2.9.10=h68273f3_2
- llvm-openmp=10.0.1=hc9558a2_0
- logmuse=0.2.6=pyh8c360ce_0
- lz4-c=1.9.2=he1b5a44_3
- lzo=2.10=h516909a_1000
- mamba=0.15.2=py36h05d92e0_0
- markupsafe=1.1.1=py36h8c4c3a4_1
- more-itertools=8.5.0=py_0
- multidict=4.7.5=py36h8c4c3a4_1
- nbformat=5.0.7=py_0
- ncurses=6.2=he1b5a44_1
- networkx=2.5=py_0
- numpy=1.19.1=py36h3849536_2
- oauth2client=4.1.3=py_0
- openjpeg=2.3.1=h981e76c_3
- openssl=1.1.1k=h7f98852_0
- packaging=20.4=py_0
- pandas=1.1.3=py36h831f99a_0
- pango=1.42.4=h7062337_4
- paramiko=2.7.2=pyh9f0ad1d_0
- pcre=8.44=he1b5a44_0
- peppy=0.31.2=pyhd8ed1ab_2
- perl=5.26.2=h516909a_1006
- pip=20.2.3=py_0
- pixman=0.38.0=h516909a_1003
- pkg-config=0.29.2=h516909a_1006
- pluggy=0.13.1=py36_0
- poyo=0.5.0=py_0
- prettytable=0.7.2=py_3
- protobuf=3.13.0=py36h831f99a_0
- psutil=5.7.2=py36h8c4c3a4_0
- pthread-stubs=0.4=h14c3975_1001
- pulp=2.3=py36h9f0ad1d_1
- py=1.9.0=py_0
- pyasn1=0.4.8=py_0
- pyasn1-modules=0.2.7=py_0
- pycosat=0.6.3=py36h8f6f2f9_1006
- pycparser=2.20=pyh9f0ad1d_2
- pygments=2.7.1=py_0
- pygraphviz=1.6=py36h8c4c3a4_0
- pynacl=1.4.0=py36h8c4c3a4_1
- pyopenssl=19.1.0=py_1
- pyparsing=2.4.7=pyh9f0ad1d_0
- pyrsistent=0.17.3=py36h8c4c3a4_0
- pysftp=0.2.9=py_1
- pysocks=1.7.1=py36h9f0ad1d_1
- pytest=6.1.1=py36_0
- python=3.6.11=h4d41432_2_cpython
- python-dateutil=2.8.1=py_0
- python-irodsclient=0.8.2=py_0
- python-slugify=4.0.1=pyh9f0ad1d_0
- python_abi=3.6=1_cp36m
- pytz=2020.1=pyh9f0ad1d_0
- pyyaml=5.3.1=py36h8c4c3a4_0
- ratelimiter=1.2.0=py36h9f0ad1d_1001
- readline=8.0=he28a2e2_2
- reproc=14.2.1=h36c2ea0_0
- reproc-cpp=14.2.1=h58526e2_0
- requests=2.24.0=pyh9f0ad1d_0
- rsa=4.6=pyh9f0ad1d_0
- ruamel_yaml=0.15.80=py36h8f6f2f9_1004
- s3transfer=0.3.3=py36h9f0ad1d_1
- scipy=1.5.2=py36habc2bb6_0
- setuptools=49.6.0=py36h9f0ad1d_1
- simplejson=3.17.2=py36h8c4c3a4_0
- six=1.15.0=pyh9f0ad1d_0
- slacker=0.14.0=py_0
- smart_open=3.0.0=py_0
- smmap=3.0.4=pyh9f0ad1d_0
- snakemake=6.4.1=hdfd78af_0
- snakemake-minimal=6.4.1=pyhdfd78af_0
- sqlite=3.33.0=h4cf870e_1
- stopit=1.1.2=py_0
- text-unidecode=1.3=py_0
- tk=8.6.10=hed695b0_1
- toml=0.10.1=py_0
- toposort=1.5=py_3
- tqdm=4.64.1=pyhd8ed1ab_0
- traitlets=4.3.3=py36h9f0ad1d_1
- typing_extensions=3.7.4.2=py_0
- ubiquerg=0.6.1=pyh9f0ad1d_0
- unidecode=1.1.1=py_0
- uritemplate=3.0.1=py_0
- urllib3=1.25.10=py_0
- veracitools=0.1.3=py_0
- wheel=0.35.1=pyh9f0ad1d_0
- whichcraft=0.6.1=py_0
- wrapt=1.12.1=py36h8c4c3a4_1
- xmlrunner=1.7.7=py_0
- xorg-kbproto=1.0.7=h14c3975_1002
- xorg-libice=1.0.10=h516909a_0
- xorg-libsm=1.2.3=h84519dc_1000
- xorg-libx11=1.6.12=h516909a_0
- xorg-libxau=1.0.9=h14c3975_0
- xorg-libxdmcp=1.1.3=h516909a_0
- xorg-libxext=1.3.4=h516909a_0
- xorg-libxpm=3.5.13=h516909a_0
- xorg-libxrender=0.9.10=h516909a_1002
- xorg-libxt=1.1.5=h516909a_1003
- xorg-renderproto=0.11.1=h14c3975_1002
- xorg-xextproto=7.3.0=h14c3975_1002
- xorg-xproto=7.0.31=h14c3975_1007
- xz=5.2.5=h516909a_1
- yaml=0.2.5=h516909a_0
- yarl=1.4.2=py36h516909a_0
- zipp=3.3.0=py_0
- zlib=1.2.11=h516909a_1009
- zstd=1.4.5=h6597ccf_2
- pip:
- flit==2.2.0
- flit-core==2.2.0
- pysam==0.19.1
- pytoml==0.1.21
prefix: /directflow/SCCGGroupShare/projects/DrewNeavin/software/anaconda3/envs/wg1_snakemake641