From 9e73390536e19f20f930bbcbf2a41849fd0727ee Mon Sep 17 00:00:00 2001 From: ChrisKent Date: Thu, 22 Feb 2024 17:05:54 +0000 Subject: [PATCH 1/6] Changed status to tested --- primerschemes/who-tb-amr-panel/1000/v1.0.0/README.md | 2 +- primerschemes/who-tb-amr-panel/1000/v1.0.0/info.json | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/primerschemes/who-tb-amr-panel/1000/v1.0.0/README.md b/primerschemes/who-tb-amr-panel/1000/v1.0.0/README.md index 2bf8c93..a96117c 100644 --- a/primerschemes/who-tb-amr-panel/1000/v1.0.0/README.md +++ b/primerschemes/who-tb-amr-panel/1000/v1.0.0/README.md @@ -17,7 +17,7 @@ A panel containing ~1200 mutations in WHO/UCN/GTB/PCI/2021.7, alongside 60 typin "schemename": "who-tb-amr-panel", "primer_bed_md5": "5de2031db0062acbc75b2ad7d3de40f4", "reference_fasta_md5": "864e27657ef9b0e70182b6de7234c440", - "status": "draft", + "status": "tested", "citations": [], "authors": [ "quick lab", diff --git a/primerschemes/who-tb-amr-panel/1000/v1.0.0/info.json b/primerschemes/who-tb-amr-panel/1000/v1.0.0/info.json index f2ba546..e7c8816 100644 --- a/primerschemes/who-tb-amr-panel/1000/v1.0.0/info.json +++ b/primerschemes/who-tb-amr-panel/1000/v1.0.0/info.json @@ -4,7 +4,7 @@ "schemename": "who-tb-amr-panel", "primer_bed_md5": "5de2031db0062acbc75b2ad7d3de40f4", "reference_fasta_md5": "864e27657ef9b0e70182b6de7234c440", - "status": "draft", + "status": "tested", "citations": [], "authors": [ "quick lab", From 4c433a414a28ec784df0bb0e83ec2ca254ad8ffd Mon Sep 17 00:00:00 2001 From: ChrisKent Date: Tue, 27 Feb 2024 14:25:12 +0000 Subject: [PATCH 2/6] Revert "Changed status to tested" This reverts commit 9e73390536e19f20f930bbcbf2a41849fd0727ee. --- primerschemes/who-tb-amr-panel/1000/v1.0.0/README.md | 2 +- primerschemes/who-tb-amr-panel/1000/v1.0.0/info.json | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/primerschemes/who-tb-amr-panel/1000/v1.0.0/README.md b/primerschemes/who-tb-amr-panel/1000/v1.0.0/README.md index a96117c..2bf8c93 100644 --- a/primerschemes/who-tb-amr-panel/1000/v1.0.0/README.md +++ b/primerschemes/who-tb-amr-panel/1000/v1.0.0/README.md @@ -17,7 +17,7 @@ A panel containing ~1200 mutations in WHO/UCN/GTB/PCI/2021.7, alongside 60 typin "schemename": "who-tb-amr-panel", "primer_bed_md5": "5de2031db0062acbc75b2ad7d3de40f4", "reference_fasta_md5": "864e27657ef9b0e70182b6de7234c440", - "status": "tested", + "status": "draft", "citations": [], "authors": [ "quick lab", diff --git a/primerschemes/who-tb-amr-panel/1000/v1.0.0/info.json b/primerschemes/who-tb-amr-panel/1000/v1.0.0/info.json index e7c8816..f2ba546 100644 --- a/primerschemes/who-tb-amr-panel/1000/v1.0.0/info.json +++ b/primerschemes/who-tb-amr-panel/1000/v1.0.0/info.json @@ -4,7 +4,7 @@ "schemename": "who-tb-amr-panel", "primer_bed_md5": "5de2031db0062acbc75b2ad7d3de40f4", "reference_fasta_md5": "864e27657ef9b0e70182b6de7234c440", - "status": "tested", + "status": "draft", "citations": [], "authors": [ "quick lab", From 7a8fa9edafc094cc7e293f088b630ae86c2befac Mon Sep 17 00:00:00 2001 From: ChrisgKent Date: Mon, 4 Mar 2024 21:26:22 +0000 Subject: [PATCH 3/6] Auto updating index --- index.json | 110 ++++++++++++++++++++++++++--------------------------- 1 file changed, 55 insertions(+), 55 deletions(-) diff --git a/index.json b/index.json index 410a795..edc68c7 100644 --- a/index.json +++ b/index.json @@ -1,5 +1,5 @@ { - "github-commit-sha": "6fb99f888710f016e493ce20ca3e5f699bc762eb", + "github-commit-sha": "8b0bc333565fdb4de318b11130957a2e03581505", "primerschemes": { "artic-measles": { "400": { @@ -18,13 +18,13 @@ "WASTE-WATER", "QUICK-LAB" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-measles/400/v1.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-measles/400/v1.0.0/info.json", "license": "CC BY-SA 4.0", "primer_bed_md5": "b8b903356d4c6bd4dc03af04f3a18222", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-measles/400/v1.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-measles/400/v1.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "2c3dd74742a333dffb50bcfbd158bfbd", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-measles/400/v1.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-measles/400/v1.0.0/reference.fasta", "schemename": "artic-measles", "schemeversion": "v1.0.0", "species": [ @@ -51,13 +51,13 @@ "QUICK-LAB", "ARTIC" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-pan-ebola/1000/v1.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-pan-ebola/1000/v1.0.0/info.json", "license": "CC BY-SA 4.0", "primer_bed_md5": "c58ec3b4d07d24499106fed6501016a9", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-pan-ebola/1000/v1.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-pan-ebola/1000/v1.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "083c89a1798778fbe94a643d83a6fbb1", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-pan-ebola/1000/v1.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-pan-ebola/1000/v1.0.0/reference.fasta", "schemename": "artic-pan-ebola", "schemeversion": "v1.0.0", "species": [ @@ -86,13 +86,13 @@ "ARTIC", "WASTE-WATER" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v1.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v1.0.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "578f9cb933e01de0f3e9921cec14e5dc", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v1.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v1.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "92ed86bf00cf94f9daef6acc81a8e48e", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v1.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v1.0.0/reference.fasta", "schemename": "artic-sars-cov-2", "schemeversion": "v1.0.0", "species": [ @@ -117,13 +117,13 @@ "ARTIC", "WASTE-WATER" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v2.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v2.0.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "1c0a95ccccf7be15642bc385cb5e5deb", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v2.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v2.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "92ed86bf00cf94f9daef6acc81a8e48e", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v2.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v2.0.0/reference.fasta", "schemename": "artic-sars-cov-2", "schemeversion": "v2.0.0", "species": [ @@ -148,13 +148,13 @@ "QUICK-LAB", "WASTE-WATER" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v3.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v3.0.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "eff5fc84416bfbe998e336eafe8da50c", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v3.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v3.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "92ed86bf00cf94f9daef6acc81a8e48e", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v3.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v3.0.0/reference.fasta", "schemename": "artic-sars-cov-2", "schemeversion": "v3.0.0", "species": [ @@ -177,13 +177,13 @@ "WHOLE-GENOME", "ARTIC" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v4.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v4.0.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "abbf6afccda4d8b737c59c8ec3373d94", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v4.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v4.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "92ed86bf00cf94f9daef6acc81a8e48e", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v4.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v4.0.0/reference.fasta", "schemename": "artic-sars-cov-2", "schemeversion": "v4.0.0", "species": [ @@ -208,13 +208,13 @@ "ARTIC", "QUICK-LAB" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v4.1.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v4.1.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "019a9aa7d924344ef344316bb9a9172a", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v4.1.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v4.1.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "92ed86bf00cf94f9daef6acc81a8e48e", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v4.1.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v4.1.0/reference.fasta", "schemename": "artic-sars-cov-2", "schemeversion": "v4.1.0", "species": [ @@ -237,13 +237,13 @@ "WHOLE-GENOME", "WASTE-WATER" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v5.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v5.0.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "409cd97bae3cf62207311f6e2f52f841", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v5.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v5.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "92ed86bf00cf94f9daef6acc81a8e48e", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v5.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v5.0.0/reference.fasta", "schemename": "artic-sars-cov-2", "schemeversion": "v5.0.0", "species": [ @@ -266,13 +266,13 @@ "QUICK-LAB", "WHOLE-GENOME" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v5.2.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v5.2.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "3dcc7210e679c4629f386696d9d7a00e", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v5.2.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v5.2.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "92ed86bf00cf94f9daef6acc81a8e48e", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v5.2.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v5.2.0/reference.fasta", "schemename": "artic-sars-cov-2", "schemeversion": "v5.2.0", "species": [ @@ -296,13 +296,13 @@ "WASTE-WATER", "ARTIC" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v5.3.2/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v5.3.2/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "fe65441b1a9c08dc3a5e638d8c13a140", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v5.3.2/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v5.3.2/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "92ed86bf00cf94f9daef6acc81a8e48e", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/artic-sars-cov-2/400/v5.3.2/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/artic-sars-cov-2/400/v5.3.2/reference.fasta", "schemename": "artic-sars-cov-2", "schemeversion": "v5.3.2", "species": [ @@ -327,13 +327,13 @@ "QUICK-LAB", "WHOLE-GENOME" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/500/v1.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/hbv/500/v1.0.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "f1874f2b2332dff4b4cd6f0075f128dd", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/500/v1.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/hbv/500/v1.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "ba8c5fbd0d52e6d682ee6062bc517ad9", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/500/v1.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/hbv/500/v1.0.0/reference.fasta", "schemename": "hbv", "schemeversion": "v1.0.0", "species": [ @@ -354,13 +354,13 @@ "QUICK-LAB", "WHOLE-GENOME" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/500/v1.1.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/hbv/500/v1.1.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "dd96ade2e5c59377808368cc116a8361", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/500/v1.1.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/hbv/500/v1.1.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "ba8c5fbd0d52e6d682ee6062bc517ad9", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/500/v1.1.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/hbv/500/v1.1.0/reference.fasta", "schemename": "hbv", "schemeversion": "v1.1.0", "species": [ @@ -384,13 +384,13 @@ "QUICK-LAB", "WHOLE-GENOME" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/600/v2.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/hbv/600/v2.0.0/info.json", "license": "CC BY-SA 4.0", "primer_bed_md5": "cc26865ef9128cce73cfa2c0919790ec", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/600/v2.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/hbv/600/v2.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "b0c81b63db38a860016236b68977f38e", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/600/v2.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/hbv/600/v2.0.0/reference.fasta", "schemename": "hbv", "schemeversion": "v2.0.0", "species": [ @@ -415,13 +415,13 @@ "WHOLE-GENOME", "QUICK-LAB" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/mers-cov/400/v1.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/mers-cov/400/v1.0.0/info.json", "license": "CC BY-SA 4.0", "primer_bed_md5": "6853274c2b5b338e7616c99bacef63aa", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/mers-cov/400/v1.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/mers-cov/400/v1.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "6013c953b7924764d8d1ffe9027bc930", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/mers-cov/400/v1.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/mers-cov/400/v1.0.0/reference.fasta", "schemename": "mers-cov", "schemeversion": "v1.0.0", "species": [ @@ -446,13 +446,13 @@ "QUICK-LAB", "WHOLE-GENOME" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/norovirus-gii/800/v1.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/norovirus-gii/800/v1.0.0/info.json", "license": "CC BY-SA 4.0", "primer_bed_md5": "3191ec8a80f14a5688d561fe2cf77e34", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/norovirus-gii/800/v1.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/norovirus-gii/800/v1.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "d128fe1bf5abe0d68f0f33ecccd4b79e", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/norovirus-gii/800/v1.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/norovirus-gii/800/v1.0.0/reference.fasta", "schemename": "norovirus-gii", "schemeversion": "v1.0.0", "species": [ @@ -474,13 +474,13 @@ ], "citations": [], "collections": [], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/pan-measles/1000/v1.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/pan-measles/1000/v1.0.0/info.json", "license": "CC BY-SA 4.0", "primer_bed_md5": "0be34569ff26f64d1c4b801661f90c9f", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/pan-measles/1000/v1.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/pan-measles/1000/v1.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "2c3dd74742a333dffb50bcfbd158bfbd", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/pan-measles/1000/v1.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/pan-measles/1000/v1.0.0/reference.fasta", "schemename": "pan-measles", "schemeversion": "v1.0.0", "species": [ @@ -506,13 +506,13 @@ "PANEL", "QUICK-LAB" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/who-tb-amr-panel/1000/v1.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/who-tb-amr-panel/1000/v1.0.0/info.json", "license": "CC BY-SA 4.0", "primer_bed_md5": "5de2031db0062acbc75b2ad7d3de40f4", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/who-tb-amr-panel/1000/v1.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/who-tb-amr-panel/1000/v1.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "864e27657ef9b0e70182b6de7234c440", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/who-tb-amr-panel/1000/v1.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/who-tb-amr-panel/1000/v1.0.0/reference.fasta", "schemename": "who-tb-amr-panel", "schemeversion": "v1.0.0", "species": [ @@ -534,13 +534,13 @@ "PANEL", "MODJADJI" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/who-tb-amr-panel/1000/v2.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/who-tb-amr-panel/1000/v2.0.0/info.json", "license": "CC BY-SA 4.0", "primer_bed_md5": "9837df01172dce6ac2d3c4243eac748f", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/who-tb-amr-panel/1000/v2.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/who-tb-amr-panel/1000/v2.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "864e27657ef9b0e70182b6de7234c440", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/who-tb-amr-panel/1000/v2.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/who-tb-amr-panel/1000/v2.0.0/reference.fasta", "schemename": "who-tb-amr-panel", "schemeversion": "v2.0.0", "species": [ From c1e6c0e1a97d1d8ae57cefc8aadce566111c4ff0 Mon Sep 17 00:00:00 2001 From: ChrisKent Date: Tue, 5 Mar 2024 13:17:45 +0000 Subject: [PATCH 4/6] Added the hev/400/v1.0.0 scheme --- primerschemes/hev/400/v1.0.0/README.md | 50 + primerschemes/hev/400/v1.0.0/info.json | 28 + primerschemes/hev/400/v1.0.0/primer.bed | 248 + primerschemes/hev/400/v1.0.0/reference.fasta | 121 + .../hev/400/v1.0.0/work/NC_001434.1.html | 14 + .../hev/400/v1.0.0/work/NC_001434.1.png | Bin 0 -> 210420 bytes .../all_genomes.align.mod.ds.ref.align.fasta | 39975 ++++++++++++++++ .../hev/400/v1.0.0/work/amplicon.bed | 21 + primerschemes/hev/400/v1.0.0/work/config.json | 46 + primerschemes/hev/400/v1.0.0/work/file.log | 16848 +++++++ .../hev/400/v1.0.0/work/plotdata.json.gz | Bin 0 -> 47390 bytes .../400/v1.0.0/work/primertrim.amplicon.bed | 21 + 12 files changed, 57372 insertions(+) create mode 100644 primerschemes/hev/400/v1.0.0/README.md create mode 100644 primerschemes/hev/400/v1.0.0/info.json create mode 100644 primerschemes/hev/400/v1.0.0/primer.bed create mode 100644 primerschemes/hev/400/v1.0.0/reference.fasta create mode 100644 primerschemes/hev/400/v1.0.0/work/NC_001434.1.html create mode 100644 primerschemes/hev/400/v1.0.0/work/NC_001434.1.png create mode 100644 primerschemes/hev/400/v1.0.0/work/all_genomes.align.mod.ds.ref.align.fasta create mode 100644 primerschemes/hev/400/v1.0.0/work/amplicon.bed create mode 100644 primerschemes/hev/400/v1.0.0/work/config.json create mode 100644 primerschemes/hev/400/v1.0.0/work/file.log create mode 100644 primerschemes/hev/400/v1.0.0/work/plotdata.json.gz create mode 100644 primerschemes/hev/400/v1.0.0/work/primertrim.amplicon.bed diff --git a/primerschemes/hev/400/v1.0.0/README.md b/primerschemes/hev/400/v1.0.0/README.md new file mode 100644 index 0000000..cd3b9e8 --- /dev/null +++ b/primerschemes/hev/400/v1.0.0/README.md @@ -0,0 +1,50 @@ +# hev 400bp v1.0.0 + +## Description + +A full genome scheme designed for the Hepatitis E virus + +## Overviews + +![NC_001434.1.png](work/NC_001434.1.png) + +## Details + +```json +{ + "ampliconsize": 400, + "schemeversion": "v1.0.0", + "schemename": "hev", + "primer_bed_md5": "ade0aa4af6881675ffc2203377550bec", + "reference_fasta_md5": "fd028d0c1bda3584965792fb57cec0a5", + "status": "draft", + "citations": [], + "authors": [ + "artic network", + "quick lab" + ], + "algorithmversion": "primalscheme3:1.1.4", + "species": [ + 291484 + ], + "license": "CC BY-SA 4.0", + "primerclass": "primerschemes", + "infoschema": "v1.3.0", + "articbedversion": "v3.0", + "description": "A full genome scheme designed for the Hepatitis E virus", + "derivedfrom": null, + "collections": [ + "WASTE-WATER", + "QUICK-LAB", + "WHOLE-GENOME" + ] +} +``` + + + +------------------------------------------------------------------------ + +This work is licensed under a [Creative Commons Attribution-ShareAlike 4.0 International License](http://creativecommons.org/licenses/by-sa/4.0/) + +![](https://i.creativecommons.org/l/by-sa/4.0/88x31.png) \ No newline at end of file diff --git a/primerschemes/hev/400/v1.0.0/info.json b/primerschemes/hev/400/v1.0.0/info.json new file mode 100644 index 0000000..e2321fa --- /dev/null +++ b/primerschemes/hev/400/v1.0.0/info.json @@ -0,0 +1,28 @@ +{ + "ampliconsize": 400, + "schemeversion": "v1.0.0", + "schemename": "hev", + "primer_bed_md5": "ade0aa4af6881675ffc2203377550bec", + "reference_fasta_md5": "fd028d0c1bda3584965792fb57cec0a5", + "status": "draft", + "citations": [], + "authors": [ + "artic network", + "quick lab" + ], + "algorithmversion": "primalscheme3:1.1.4", + "species": [ + 291484 + ], + "license": "CC BY-SA 4.0", + "primerclass": "primerschemes", + "infoschema": "v1.3.0", + "articbedversion": "v3.0", + "description": "A full genome scheme designed for the Hepatitis E virus", + "derivedfrom": null, + "collections": [ + "WASTE-WATER", + "QUICK-LAB", + "WHOLE-GENOME" + ] +} \ No newline at end of file diff --git a/primerschemes/hev/400/v1.0.0/primer.bed b/primerschemes/hev/400/v1.0.0/primer.bed new file mode 100644 index 0000000..0a6dc74 --- /dev/null +++ b/primerschemes/hev/400/v1.0.0/primer.bed @@ -0,0 +1,248 @@ +# artic-bed-version v3.0 +NC_001434.1 82 101 576d3e45_0_LEFT_0 1 + CCCTGGCGAATGCTGTGGT +NC_001434.1 81 101 576d3e45_0_LEFT_1 1 + GCCTTGGCGAATGCTGTGGT +NC_001434.1 497 517 576d3e45_0_RIGHT_0 1 - AGGGCCAAAGGTCATGCAGT +NC_001434.1 497 517 576d3e45_0_RIGHT_1 1 - CCGGCCAGAGGTCATGCAAA +NC_001434.1 497 517 576d3e45_0_RIGHT_2 1 - CCGGCCAGAGGTCATGCAAT +NC_001434.1 497 519 576d3e45_0_RIGHT_3 1 - CGAAGGCCAAAGGTCATGCAAT +NC_001434.1 497 519 576d3e45_0_RIGHT_4 1 - CGAAGGCCAAAGGTCATGCAGT +NC_001434.1 497 519 576d3e45_0_RIGHT_5 1 - CGAGGGCCAAAGATCATGCAGT +NC_001434.1 497 519 576d3e45_0_RIGHT_6 1 - CGAGGGCCAAAGGTCATGCAAT +NC_001434.1 497 516 576d3e45_0_RIGHT_7 1 - CGGCCAGAGGTCATGCAGA +NC_001434.1 497 518 576d3e45_0_RIGHT_8 1 - GAAGGCCAGAGGTCATGCAGT +NC_001434.1 497 516 576d3e45_0_RIGHT_9 1 - GGGCCAGAGGTCATGCAGT +NC_001434.1 432 456 576d3e45_1_LEFT_0 2 + ACATATTGCTTCGACGGGTTTTCC +NC_001434.1 432 456 576d3e45_1_LEFT_1 2 + ACCTACTGTTTTGACGGGTTCTCC +NC_001434.1 436 456 576d3e45_1_LEFT_2 2 + ACTGCTTCGACGGGTTCTCC +NC_001434.1 433 456 576d3e45_1_LEFT_3 2 + CATACTGCTTCGACGGGTTTTCC +NC_001434.1 433 456 576d3e45_1_LEFT_4 2 + CATATTGCTTCGACGGGTTCTCC +NC_001434.1 428 456 576d3e45_1_LEFT_5 2 + TCGTACCTATTGTTTTGATGGATTCTCC +NC_001434.1 852 878 576d3e45_1_RIGHT_0 2 - ATGGACCTAACATACACCTCTGTTGA +NC_001434.1 852 883 576d3e45_1_RIGHT_1 2 - CAAATATAGACCTAACATACACCTCTGTTGA +NC_001434.1 852 883 576d3e45_1_RIGHT_2 2 - CAAATATGGATCTAACATACACCTCTGTTGA +NC_001434.1 852 884 576d3e45_1_RIGHT_3 2 - CCAAATATAGATCTAACATACACCTCTGTTGA +NC_001434.1 852 876 576d3e45_1_RIGHT_4 2 - CGATCGGACATAGACCTCGGTAGA +NC_001434.1 852 873 576d3e45_1_RIGHT_5 2 - GCGGACATACACCTCTGTCGA +NC_001434.1 852 876 576d3e45_1_RIGHT_6 2 - GGACCTGACATACACCTCTGTTGA +NC_001434.1 852 877 576d3e45_1_RIGHT_7 2 - TGGATCTAACGTACACCTCTGTTGA +NC_001434.1 779 804 576d3e45_2_LEFT_0 1 + CGGCTGCCATTTTGTTTTACTCCTT +NC_001434.1 784 804 576d3e45_2_LEFT_1 1 + GCCACTTTGTGCTGCTGCTC +NC_001434.1 780 804 576d3e45_2_LEFT_2 1 + GGCTGCCATTTTGTCCTACTCCTT +NC_001434.1 780 804 576d3e45_2_LEFT_3 1 + GGCTGCCATTTTGTCCTACTTCTT +NC_001434.1 780 804 576d3e45_2_LEFT_4 1 + GGCTGCCATTTTGTCTTACTCCTT +NC_001434.1 780 804 576d3e45_2_LEFT_5 1 + GGCTGCCATTTTGTTCTACTCCTT +NC_001434.1 783 804 576d3e45_2_LEFT_6 1 + TGCCATTTTGTGCTGCTGCTT +NC_001434.1 1209 1232 576d3e45_2_RIGHT_0 1 - AGCCTTGTGATGAACTTTTGGGC +NC_001434.1 1209 1241 576d3e45_2_RIGHT_1 1 - CAACTATATAACCTTGTGATAAACTTTTGGGC +NC_001434.1 1209 1242 576d3e45_2_RIGHT_2 1 - CCAACTATAAAGTCTTGTAATGAATTTTTGGGC +NC_001434.1 1209 1242 576d3e45_2_RIGHT_3 1 - CCAACTATAGAGTCTTGTGATAAATTTTTGAGC +NC_001434.1 1209 1239 576d3e45_2_RIGHT_4 1 - GCTATATAGCCTTGTGATAAACTTTTGGGC +NC_001434.1 1209 1239 576d3e45_2_RIGHT_5 1 - GCTATATAGCCTTGTGATAAATTTTTGGGC +NC_001434.1 1160 1183 576d3e45_3_LEFT_0 2 + ACGAACACAGGCCATTTCCAAAG +NC_001434.1 1157 1183 576d3e45_3_LEFT_1 2 + CCTACGAACACAGGCCATTTCTAAAG +NC_001434.1 1157 1183 576d3e45_3_LEFT_2 2 + CCTCCGTACTCAAGCTATATCCAAGG +NC_001434.1 1161 1183 576d3e45_3_LEFT_3 2 + CGAACACAGGCCATCTCCAAAG +NC_001434.1 1161 1183 576d3e45_3_LEFT_4 2 + CGCACCCAGGCTATATCCAAGG +NC_001434.1 1161 1183 576d3e45_3_LEFT_5 2 + CGGACACAGGCCATTTCCAAAG +NC_001434.1 1162 1183 576d3e45_3_LEFT_6 2 + GCACCCAGGCGATATCCAAGG +NC_001434.1 1596 1617 576d3e45_3_RIGHT_0 2 - CGGGATGTTAAGCGCCCTGTA +NC_001434.1 1596 1618 576d3e45_3_RIGHT_1 2 - GCGGGATGTTAAGCGCCCTATA +NC_001434.1 1596 1616 576d3e45_3_RIGHT_2 2 - GGGAGATCGAGGGCCTGGTA +NC_001434.1 1596 1623 576d3e45_3_RIGHT_3 2 - GTCATCCGGGATATTAAGCGCTCTATA +NC_001434.1 1596 1624 576d3e45_3_RIGHT_4 2 - TGTCATCTGGGATATTAAGCGCTCTATA +NC_001434.1 1540 1563 576d3e45_4_LEFT_0 1 + CTCACCTTGATGTCTCTGGGACT +NC_001434.1 1539 1563 576d3e45_4_LEFT_1 1 + GCCCATCTTGATGTTTCTGGGACT +NC_001434.1 1541 1563 576d3e45_4_LEFT_2 1 + TCACCTTGATGTTTCCGGGACC +NC_001434.1 1541 1563 576d3e45_4_LEFT_3 1 + TCACCTTGATGTTTCCGGGACT +NC_001434.1 1958 1985 576d3e45_4_RIGHT_0 1 - CGCTGGGTAAACCTATTGTACCTGTAT +NC_001434.1 1958 1985 576d3e45_4_RIGHT_1 1 - CGCTGGGTAAACCTGTTGTACCTATAG +NC_001434.1 1958 1985 576d3e45_4_RIGHT_2 1 - CGCTGGGTGAACCTATTATACCTGTAT +NC_001434.1 1958 1985 576d3e45_4_RIGHT_3 1 - CGCTGGGTGAACCTATTGTACCTATAT +NC_001434.1 1958 1984 576d3e45_4_RIGHT_4 1 - GCTGAGTGAACCTGTTGTACCTGTAA +NC_001434.1 1958 1984 576d3e45_4_RIGHT_5 1 - GCTGGGTGAACCTATTGTACCTGTAT +NC_001434.1 1851 1871 576d3e45_5_LEFT_0 2 + CTGGAGGTGCGCTATGTTGC +NC_001434.1 1846 1871 576d3e45_5_LEFT_1 2 + CTGGTCTGCAGGTCAAGATTTCATC +NC_001434.1 1845 1871 576d3e45_5_LEFT_2 2 + GCCGGTCTGCAGGTTAAAATATCTTC +NC_001434.1 1845 1871 576d3e45_5_LEFT_3 2 + GCTGGTTTGCAGGTCAAGATTTCATC +NC_001434.1 1845 1871 576d3e45_5_LEFT_4 2 + GCTGGTTTGCAGGTTAAGATTTCATC +NC_001434.1 1844 1871 576d3e45_5_LEFT_5 2 + TGCTGGTCTGCAGGTTAAAATATCTTC +NC_001434.1 2280 2300 576d3e45_5_RIGHT_0 2 - GCGGGGCTAGATGGTTGAGC +NC_001434.1 2094 2115 576d3e45_6_LEFT_0 1 + GGAACCTTGTACACCCGGACA +NC_001434.1 2093 2115 576d3e45_6_LEFT_1 1 + GGGAACTTTGTACACCCGGACT +NC_001434.1 2089 2115 576d3e45_6_LEFT_2 1 + GTGAGAGCACACTTTATACACGAACT +NC_001434.1 2090 2115 576d3e45_6_LEFT_3 1 + TGAGAGCACACTTTACACACGAACT +NC_001434.1 2499 2523 576d3e45_6_RIGHT_0 1 - AAGACCGTCACGCATAATGAACTC +NC_001434.1 2499 2522 576d3e45_6_RIGHT_1 1 - AGACCCTCACGCATGACAAAATC +NC_001434.1 2499 2522 576d3e45_6_RIGHT_2 1 - AGACCCTCGCGCATAACAAAATC +NC_001434.1 2499 2522 576d3e45_6_RIGHT_3 1 - AGGCCTTCACGCATGACAAAATC +NC_001434.1 2499 2519 576d3e45_6_RIGHT_4 1 - CCGTCGCGCATCACAAAAGA +NC_001434.1 2499 2524 576d3e45_6_RIGHT_5 1 - CGAGACCTTCACGCATGACAAAATC +NC_001434.1 2499 2521 576d3e45_6_RIGHT_6 1 - GACCGTCGCGCATAATGAACTC +NC_001434.1 2398 2420 576d3e45_7_LEFT_0 2 + ACTGTGATTGGCTGGTCAATGC +NC_001434.1 2396 2420 576d3e45_7_LEFT_1 2 + AGACTGTGATTGGCTGGTTAATGC +NC_001434.1 2397 2420 576d3e45_7_LEFT_2 2 + GACTGTGACTGGCTGGTTAATGC +NC_001434.1 2394 2420 576d3e45_7_LEFT_3 2 + TCAGATTGTGATTGGCTGGTTAATGC +NC_001434.1 2394 2420 576d3e45_7_LEFT_4 2 + TCAGATTGTTACTGGCTGGTTAATGC +NC_001434.1 2396 2420 576d3e45_7_LEFT_5 2 + TGACTGTGATTGGCTGGTTAATGC +NC_001434.1 2831 2853 576d3e45_7_RIGHT_0 2 - AGCATCGATCTCCAGTGCTAGG +NC_001434.1 2831 2854 576d3e45_7_RIGHT_1 2 - CAGAGTCAATCTCAAGCGCAAGG +NC_001434.1 2831 2854 576d3e45_7_RIGHT_2 2 - CAGCGTCGATCTCTAGTGCTAGG +NC_001434.1 2831 2853 576d3e45_7_RIGHT_3 2 - GGAGTCAATCTCAAGCGCAAGG +NC_001434.1 2831 2853 576d3e45_7_RIGHT_4 2 - GGAGTCGATCTCAAGCGCAAGG +NC_001434.1 2731 2753 576d3e45_8_LEFT_0 1 + ACGAGCTCTACCTAACCGACCT +NC_001434.1 2728 2753 576d3e45_8_LEFT_1 1 + GCGATGAACTTTACCTTACTGAGCC +NC_001434.1 2727 2753 576d3e45_8_LEFT_2 1 + GGTGATGAACTGTACCTTACTGAGCC +NC_001434.1 3161 3183 576d3e45_8_RIGHT_0 1 - AGCAGGGATCTGATTTGGGTCG +NC_001434.1 3161 3181 576d3e45_8_RIGHT_1 1 - CAGGGATCTGGTTCGGGTCG +NC_001434.1 3161 3181 576d3e45_8_RIGHT_2 1 - CAGGGATCTGGTTGGGGTCG +NC_001434.1 3161 3181 576d3e45_8_RIGHT_3 1 - CTGGGATCTGGTTCGGGTCG +NC_001434.1 3161 3182 576d3e45_8_RIGHT_4 1 - GCAGGAATCTGGTTGGGGTCA +NC_001434.1 3161 3182 576d3e45_8_RIGHT_5 1 - GCAGGGATCTGATTGGGGTCA +NC_001434.1 3161 3182 576d3e45_8_RIGHT_6 1 - GCAGGGATCTGATTGGGGTCG +NC_001434.1 3161 3182 576d3e45_8_RIGHT_7 1 - GCAGGGATCTGGTTGGGATCA +NC_001434.1 3161 3182 576d3e45_8_RIGHT_8 1 - GCAGGGATCTGGTTGGGGTCA +NC_001434.1 3161 3182 576d3e45_8_RIGHT_9 1 - GCAGGGATCTGGTTTGGGTCA +NC_001434.1 3161 3182 576d3e45_8_RIGHT_10 1 - GCAGGGATCTGGTTTGGGTCG +NC_001434.1 3161 3182 576d3e45_8_RIGHT_11 1 - GCGGGGATCTGATTTGGGTCG +NC_001434.1 3071 3092 576d3e45_9_LEFT_0 2 + CCGCCGTGTTGTGATTGATGA +NC_001434.1 3071 3092 576d3e45_9_LEFT_1 2 + CCGGCGTGTGGTGATAGATGA +NC_001434.1 3071 3092 576d3e45_9_LEFT_2 2 + CCGGCGTGTTGTGATTGATGA +NC_001434.1 3072 3092 576d3e45_9_LEFT_3 2 + CGGCGCGTGGTGATAGATGA +NC_001434.1 3072 3092 576d3e45_9_LEFT_4 2 + CGGCGTGTGGTGATAGACGA +NC_001434.1 3070 3092 576d3e45_9_LEFT_5 2 + GCCGGCGTGTTGTGATAGATGA +NC_001434.1 3070 3092 576d3e45_9_LEFT_6 2 + GCCGTCGTGTCGTGATTGATGA +NC_001434.1 3070 3092 576d3e45_9_LEFT_7 2 + GCCGTCGTGTTGTGATTGATGA +NC_001434.1 3071 3092 576d3e45_9_LEFT_8 2 + GCGCCGGGTTGTCATTGATGA +NC_001434.1 3070 3092 576d3e45_9_LEFT_9 2 + GTCGGCGTGTGGTGATAGATGA +NC_001434.1 3480 3505 576d3e45_9_RIGHT_0 2 - CGCGGGAAGATTGAATAAGACCTCT +NC_001434.1 3480 3506 576d3e45_9_RIGHT_1 2 - GCGCGAGAAGATTGAATAAGACCTCT +NC_001434.1 3480 3501 576d3e45_9_RIGHT_2 2 - GGAAGATTGGATGAGCCCCCT +NC_001434.1 3480 3502 576d3e45_9_RIGHT_3 2 - GGGAAGATTGAATGAGCCCCCT +NC_001434.1 3436 3457 576d3e45_10_LEFT_0 1 + GCGCCACTTTCACGGAGACTA +NC_001434.1 3436 3457 576d3e45_10_LEFT_1 1 + GCGCTACCTACACGGAGACCA +NC_001434.1 3435 3457 576d3e45_10_LEFT_2 1 + GGCGCCACTTTCACGGAAACTA +NC_001434.1 3435 3457 576d3e45_10_LEFT_3 1 + GGGGCCACGTTTACTGAGACTA +NC_001434.1 3434 3457 576d3e45_10_LEFT_4 1 + GGGTGCCACGTTTACAGAGACTA +NC_001434.1 3434 3457 576d3e45_10_LEFT_5 1 + GGGTGCCACGTTTACTGAGACTA +NC_001434.1 3435 3457 576d3e45_10_LEFT_6 1 + GGTGCCACGTTCACTGAGACTA +NC_001434.1 3836 3861 576d3e45_10_RIGHT_0 1 - AAAAATTAGGACGCTATCGGACACC +NC_001434.1 3836 3857 576d3e45_10_RIGHT_1 1 - ACCAGCACGCTATCAGACACC +NC_001434.1 3836 3863 576d3e45_10_RIGHT_2 1 - TCAAAAATTAGGACACTATCGGACACC +NC_001434.1 3836 3856 576d3e45_10_RIGHT_3 1 - TTAGGACGCTGTCGGACACC +NC_001434.1 3682 3702 576d3e45_11_LEFT_0 2 + TCGCGACACTACAGGCCTTT +NC_001434.1 4121 4149 576d3e45_11_RIGHT_0 2 - CTGGAAGAATGTAATACGCGATACATCA +NC_001434.1 4121 4147 576d3e45_11_RIGHT_1 2 - GGAAAAATGTGATACGCGAGACATCA +NC_001434.1 4121 4147 576d3e45_11_RIGHT_2 2 - GGAAGAATGTAATACGCGAGACATCA +NC_001434.1 4121 4148 576d3e45_11_RIGHT_3 2 - TGGAAAAATGTAATACGCGAGACATCA +NC_001434.1 4121 4148 576d3e45_11_RIGHT_4 2 - TGGAAAAATGTGATACGCGATACATCA +NC_001434.1 4121 4148 576d3e45_11_RIGHT_5 2 - TGGAAGAATGTAATACGCGAAACATCA +NC_001434.1 4053 4076 576d3e45_12_LEFT_0 1 + CTGGTTGAGGCTATGGTGGAGAA +NC_001434.1 4055 4076 576d3e45_12_LEFT_1 1 + GGTTGAGGCCATGGTGGAGAA +NC_001434.1 4056 4076 576d3e45_12_LEFT_2 1 + GTGGAGGCCATGGTCGAGAA +NC_001434.1 4054 4076 576d3e45_12_LEFT_3 1 + TGGTCGAGGCTATGGTGGAGAA +NC_001434.1 4054 4076 576d3e45_12_LEFT_4 1 + TGGTTGAGGCCATGGTGGATAA +NC_001434.1 4053 4076 576d3e45_12_LEFT_5 1 + TTGGTTGAGGCTATGGTGGAGAA +NC_001434.1 4460 4480 576d3e45_12_RIGHT_0 1 - ACAGCCGGATAAGCCACTGG +NC_001434.1 4460 4483 576d3e45_12_RIGHT_1 1 - GGTACAACCGAATTAGCCACTGG +NC_001434.1 4460 4483 576d3e45_12_RIGHT_2 1 - GGTACAACCGGATTAGCCACTGG +NC_001434.1 4460 4483 576d3e45_12_RIGHT_3 1 - GGTACAGTCGGATAAGCCACTGG +NC_001434.1 4460 4484 576d3e45_12_RIGHT_4 1 - TGATACAGTCGGATAAGCCACTGG +NC_001434.1 4460 4484 576d3e45_12_RIGHT_5 1 - TGGTACAGTCGAATAAGCCACTGG +NC_001434.1 4460 4484 576d3e45_12_RIGHT_6 1 - TGGTACAGTCGGATAAGCCATTGG +NC_001434.1 4389 4422 576d3e45_13_LEFT_0 2 + GAGTTTGATAGTACCCAAAACAATTTTTCTCTT +NC_001434.1 4395 4422 576d3e45_13_LEFT_1 2 + GATAGCACCCAAAATAACTTCTCCCTT +NC_001434.1 4394 4422 576d3e45_13_LEFT_2 2 + TGACAGCACCCAAAATAATTTCTCTCTT +NC_001434.1 4392 4422 576d3e45_13_LEFT_3 2 + TTTGATAGCACCCAAAACAATTTTTCTCTT +NC_001434.1 4829 4851 576d3e45_13_RIGHT_0 2 - CGGACCCCAGTTCTTCTCAGAT +NC_001434.1 4829 4851 576d3e45_13_RIGHT_1 2 - CGGGCCCCAATTCTTCTCAGAT +NC_001434.1 4829 4849 576d3e45_13_RIGHT_2 2 - GGCCCCAGTTCTTCTCGGAC +NC_001434.1 4829 4850 576d3e45_13_RIGHT_3 2 - GGGCCCCAATTCTTCTCGGTA +NC_001434.1 4829 4850 576d3e45_13_RIGHT_4 2 - GGGCCCCAGTTCTTCTCAGAC +NC_001434.1 4829 4850 576d3e45_13_RIGHT_5 2 - GGGCCCCAGTTCTTCTCAGAT +NC_001434.1 4649 4674 576d3e45_14_LEFT_0 1 + AGGTGATGATTCGATAGTGCTTTGC +NC_001434.1 4651 4674 576d3e45_14_LEFT_1 1 + GAGATGATTCCGTGGTCCTCTGT +NC_001434.1 4651 4674 576d3e45_14_LEFT_2 1 + GAGATGATTCGGTGGTCCTCTGT +NC_001434.1 4651 4674 576d3e45_14_LEFT_3 1 + GGGACGATTCAGTGGTTCTTTGC +NC_001434.1 4650 4674 576d3e45_14_LEFT_4 1 + GGGGATGATTCAGTGGTTCTCTGC +NC_001434.1 4650 4674 576d3e45_14_LEFT_5 1 + GGGGATGATTCAGTGGTTCTTTGC +NC_001434.1 5069 5096 576d3e45_14_RIGHT_0 1 - AAACATGTTATTCATTCTACCCGCTGT +NC_001434.1 5069 5098 576d3e45_14_RIGHT_1 1 - AAGAACATGTTATTCATTCCACCCGATAT +NC_001434.1 5069 5097 576d3e45_14_RIGHT_2 1 - AAGACATGTTATTCATTCCAACCTCTGT +NC_001434.1 5069 5097 576d3e45_14_RIGHT_3 1 - ACAACATGTTATTCATTCCAACCTCTGT +NC_001434.1 5069 5099 576d3e45_14_RIGHT_4 1 - ACAGAACATGTTATTCATTCTAACCTCTGT +NC_001434.1 5069 5094 576d3e45_14_RIGHT_5 1 - ACATGTTATTCATTCCACCCGACAC +NC_001434.1 5069 5097 576d3e45_14_RIGHT_6 1 - AGAACATGTTATTCATTCCAACCTCTGT +NC_001434.1 5069 5098 576d3e45_14_RIGHT_7 1 - CAAAACATGTTATTCATTCCAACCTCTGT +NC_001434.1 5069 5100 576d3e45_14_RIGHT_8 1 - CACAAAACATGTTATTCATTCTAACCTCTGT +NC_001434.1 5069 5093 576d3e45_14_RIGHT_9 1 - CATGTTATTCATTCCACCCGCTGT +NC_001434.1 4899 4920 576d3e45_15_LEFT_0 2 + CGAAGGCTGACGAATGTTGCG +NC_001434.1 4899 4920 576d3e45_15_LEFT_1 2 + CGAGGGTTGACGAATGTTGCG +NC_001434.1 4900 4920 576d3e45_15_LEFT_2 2 + GAGGGCTGACGAATGTTGCG +NC_001434.1 4898 4920 576d3e45_15_LEFT_3 2 + TCGAGGGTTAACGAATGTTGCG +NC_001434.1 4897 4920 576d3e45_15_LEFT_4 2 + TGCGAAAGTTAACGAATGTGGCT +NC_001434.1 5290 5310 576d3e45_15_RIGHT_0 2 - GCGAAGGGGTTGGTTGGATG +NC_001434.1 5290 5311 576d3e45_15_RIGHT_1 2 - GGCAAAGGGGTTGGTTGGATG +NC_001434.1 5234 5253 576d3e45_16_LEFT_0 1 + GCGGTGGTTTCTGGGGTGA +NC_001434.1 5233 5253 576d3e45_16_LEFT_1 1 + GGCAGTGGTTTCTGGGGTGA +NC_001434.1 5622 5647 576d3e45_16_RIGHT_0 1 - CATGATATGAGTATTGGTGCCGTCC +NC_001434.1 5622 5647 576d3e45_16_RIGHT_1 1 - CATGATGTGAGTGTTAGTGCCATCC +NC_001434.1 5622 5648 576d3e45_16_RIGHT_2 1 - CCATAATGTGAGTGTTAGTGCCATCC +NC_001434.1 5622 5648 576d3e45_16_RIGHT_3 1 - CCATGATGTGAGTATTAGTGCCATCC +NC_001434.1 5622 5648 576d3e45_16_RIGHT_4 1 - CCATTATATGAGTATTGGTGCCGTCC +NC_001434.1 5622 5644 576d3e45_16_RIGHT_5 1 - GATGTGAGTGTTGGTGCCATCC +NC_001434.1 5622 5645 576d3e45_16_RIGHT_6 1 - TGATGTGAGTATTGGTGCCGTCC +NC_001434.1 5622 5645 576d3e45_16_RIGHT_7 1 - TGATGTGAGTATTGGTGCCGTCT +NC_001434.1 5539 5564 576d3e45_17_LEFT_0 2 + ACCTCCCCTTTAACCTCATCTGTTG +NC_001434.1 5538 5564 576d3e45_17_LEFT_1 2 + CACCTCCCCTTTAACTTCATCTGTTG +NC_001434.1 5540 5564 576d3e45_17_LEFT_2 2 + CATCCCCGCTTACATCATCTGTTG +NC_001434.1 5537 5564 576d3e45_17_LEFT_3 2 + CCACCTCTCCTTTAACTTCATCTGTTG +NC_001434.1 5542 5564 576d3e45_17_LEFT_4 2 + TCCCCACTCACATCATCCGTTG +NC_001434.1 5542 5564 576d3e45_17_LEFT_5 2 + TCCCCGCTCACATCATCTGTTG +NC_001434.1 5971 5996 576d3e45_17_RIGHT_0 2 - GCGTGTTGGTGTAGGAATTAACAGG +NC_001434.1 5971 5997 576d3e45_17_RIGHT_1 2 - GGCGTGTTGGTATAGGAATTAACAGG +NC_001434.1 5971 5998 576d3e45_17_RIGHT_2 2 - GGGCGTGTTAGTATAGGAATTAACAGG +NC_001434.1 5971 5998 576d3e45_17_RIGHT_3 2 - GGGCGTGTTGGTATAAGAATTAACAGG +NC_001434.1 5971 5998 576d3e45_17_RIGHT_4 2 - GGGGGTATTGGTGTAGGAATTAACAGG +NC_001434.1 5930 5951 576d3e45_18_LEFT_0 1 + AGGCCACTTCTGGTTTGGTGA +NC_001434.1 5930 5951 576d3e45_18_LEFT_1 1 + AGGCGACATCAGGCTTGGTTA +NC_001434.1 5926 5951 576d3e45_18_LEFT_2 1 + GAGGAGGCTACTTCTGGTTTGGTAA +NC_001434.1 5932 5951 576d3e45_18_LEFT_3 1 + GCGACATCAGGCCTGGTCA +NC_001434.1 5931 5951 576d3e45_18_LEFT_4 1 + GGCGACATCAGGCCTGGTTA +NC_001434.1 5931 5951 576d3e45_18_LEFT_5 1 + GGCGACATCAGGCTTGGTCA +NC_001434.1 6338 6359 576d3e45_18_RIGHT_0 1 - AAAGTTTCACTGTCGGCTCGC +NC_001434.1 6338 6357 576d3e45_18_RIGHT_1 1 - AGCTTGACAGTCGGCTCGC +NC_001434.1 6338 6358 576d3e45_18_RIGHT_2 1 - CAGCTTAACAGTCGGCTCGC +NC_001434.1 6338 6364 576d3e45_18_RIGHT_3 1 - GGTGTATAACTTAACAGTTGGCTCGC +NC_001434.1 6338 6361 576d3e45_18_RIGHT_4 1 - GTATAACTTGACAGTCGGCTCGC +NC_001434.1 6338 6363 576d3e45_18_RIGHT_5 1 - GTATATAACTTAACAGCCGGCTCGC +NC_001434.1 6338 6363 576d3e45_18_RIGHT_6 1 - GTATATAACTTGACAGTCGGCTCGC +NC_001434.1 6338 6363 576d3e45_18_RIGHT_7 1 - GTGTATAACTTAACAGTCGGCTCGC +NC_001434.1 6217 6238 576d3e45_19_LEFT_0 2 + CGCGGTATAGCCCTAACGCTA +NC_001434.1 6215 6238 576d3e45_19_LEFT_1 2 + GCCGTGGTATAGCCCTAACGCTA +NC_001434.1 6215 6238 576d3e45_19_LEFT_2 2 + GCCGTGGTATTGCTCTCACACTC +NC_001434.1 6215 6238 576d3e45_19_LEFT_3 2 + GCCGTGGTATTGCTCTTACACTC +NC_001434.1 6214 6238 576d3e45_19_LEFT_4 2 + GGTCGTGGTATTGCTCTCACACTC +NC_001434.1 6215 6238 576d3e45_19_LEFT_5 2 + GTCGTGGTATAGCCCTAACGCTA +NC_001434.1 6583 6607 576d3e45_19_RIGHT_0 2 - AGAAACATAAACTGGGCCAGTCGA +NC_001434.1 6583 6613 576d3e45_19_RIGHT_1 2 - AGTATCTGAAACATACATAGGATTGGTCGA +NC_001434.1 6583 6607 576d3e45_19_RIGHT_2 2 - CGAGACATACATCGGGTTAGTGGA +NC_001434.1 6583 6608 576d3e45_19_RIGHT_3 2 - CTGAGACATACATAGGGTTGGTCGA +NC_001434.1 6583 6606 576d3e45_19_RIGHT_4 2 - GAGACATACATCGGGTTGGTGGA +NC_001434.1 6583 6606 576d3e45_19_RIGHT_5 2 - GAGACATACATGGGGTTGGTCGA +NC_001434.1 6583 6609 576d3e45_19_RIGHT_6 2 - TCTGAAACATACATAGGGTTGGTCGA +NC_001434.1 6583 6609 576d3e45_19_RIGHT_7 2 - TCTGAAACATACATGGGGTTGGTAGA +NC_001434.1 6583 6607 576d3e45_19_RIGHT_8 2 - TGAAACATACATGGGGTTGGTCGA +NC_001434.1 6583 6607 576d3e45_19_RIGHT_9 2 - TGAGACATACATTGGGTTGGTGGA +NC_001434.1 6583 6611 576d3e45_19_RIGHT_10 2 - TGTCTGAAACATACATAGGATTGGTCGA +NC_001434.1 6498 6520 576d3e45_20_LEFT_0 1 + CCGTCCCTTTTCAGTCCTTCGA +NC_001434.1 6499 6520 576d3e45_20_LEFT_1 1 + CGCCCCTTCTCAGTCCTTCGA +NC_001434.1 6499 6520 576d3e45_20_LEFT_2 1 + CGCCCCTTTTCAGTCCTTCGA +NC_001434.1 6499 6520 576d3e45_20_LEFT_3 1 + CGCCCTTTCTCTGTCCTTCGA +NC_001434.1 6499 6520 576d3e45_20_LEFT_4 1 + CGCCCTTTTTCGGTTCTTCGC +NC_001434.1 6499 6520 576d3e45_20_LEFT_5 1 + CGCCCTTTTTCGGTTCTTCGT +NC_001434.1 6500 6520 576d3e45_20_LEFT_6 1 + GCCCCTTCTCGGTCCTTCGA +NC_001434.1 6500 6520 576d3e45_20_LEFT_7 1 + GCCCCTTTTCAGTCCTCCGA +NC_001434.1 6896 6919 576d3e45_20_RIGHT_0 1 - ACCAACTGCAGAAACAGACACAG +NC_001434.1 6896 6918 576d3e45_20_RIGHT_1 1 - CCGACTGCAGAAACAGACACAG +NC_001434.1 6896 6918 576d3e45_20_RIGHT_2 1 - CCGACTGCAGAAACTGACACAG +NC_001434.1 6896 6917 576d3e45_20_RIGHT_3 1 - CGACCGCAGAAACAGACACAG \ No newline at end of file diff --git a/primerschemes/hev/400/v1.0.0/reference.fasta b/primerschemes/hev/400/v1.0.0/reference.fasta new file mode 100644 index 0000000..2f5a4da --- /dev/null +++ b/primerschemes/hev/400/v1.0.0/reference.fasta @@ -0,0 +1,121 @@ +>NC_001434.1 +GCCATGGAGGCCCATCAGTTTATTAAGGCTCCTGGCATCACTACTGCTATTGAGCAGGCT +GCTCTAGCAGCGGCCAACTCTGCCCTTGCGAATGCTGTGGTAGTTAGGCCTTTTCTCTCT +CACCAGCAGATTGAGATCCTTATTAACCTAATGCAACCTCGCCAGCTTGTTTTCCGCCCC +GAGGTTTTCTGGAACCATCCCATCCAGCGTGTTATCCATAATGAGCTGGAGCTTTACTGT +CGCGCCCGTTCCGGCCGCTGCCTTGAAATTGGTGCCCACCCCCGCTCAATAAATGATAAC +CCTAATGTGGTCCACCGCTGCTTCCTCCGCCCTGCCGGGCGTGATGTTCAGCGTTGGTAT +ACTGCCCCTACCCGCGGGCCGGCTGCTAATTGCCGGCGTTCCGCACTGCGCGGGCTCCCC +GCTGCTGACCGCACTTACTGCTTCGACGGGTTTTCTGGCTGTAACTTTCCCGCCGAGACT +GGCGTCGCCCTCTATTCTCTCCATGATATGTCACCATCTGATGTCGCCGAGGCTATGTTC +CGCCATGGTATGACGCGGCTTTACGCTGCCCTCCACCTCCCGCCTGAGGTCCTGTTGCCC +CCTGGCACATACCGCACCGCGTCGTACTTGCTGATCCATGACGGCAGGCGCGTTGTGGTG +ACGTATGAGGGTGACACTAGTGCTGGTTATAACCACGATGTTTCCAACCTGCGCTCCTGG +ATTAGAACCACTAAGGTTACCGGAGACCATCCTCTCGTCATTGAGCGGGTTAGGGCCATT +GGCTGCCACTTTGTCCTCTTACTCACGGCAGCCCCGGAGCCATCACCTACGCCCTATGTT +CCTTACCCCCGGTCTACCGAGGTCTATGTCCGATCGATCTTCGGCCCGGGTGGTACCCCC +TCCCTATTTCCAACCTCATGCTCCACTAAGTCGACCTTCCATGCTGTCCCTGCCCATATC +TGGGACCGTCTCATGTTGTTCGGGGCCACCCTAGATGACCAAGCCTTTTGCTGCTCCCGC +CTAATGACTTACCTCCGTGGCATTAGCTACAAGGTTACTGTGGGCACCCTTGTTGCCAAT +GAAGGCTGGAACGCCTCTGAGGTCGCTCTTACAGCTGTCATCACTGCCGCCTACCTTACC +ATCTGCCACCAGCGGTACCTCCGCACTCAGGCTATATCTAAGGGGATGCGCCGTCTGGAG +CGGGAGCATGCTCAGAAGTTTATAACACGCCTCTACAGTTGGCTCTTTGAGAAGTCCGGC +CGTGATTATATCCCCGGCCGTCAGTTGGAGTTCTACGCTCAGTGTAGGCGCTGGCTCTCG +GCCGGCTTTCATCTTGACCCACGGGTGTTGGTTTTTGATGAGTCGGCCCCCTGCCACTGT +AGGACTGCGATTCGTAAGGCGGTCTCAAAGTTTTGCTGTTTTATGAAGTGGCTGGGCCAG +GAGTGCACCTGTTTCCTACAACCTGCAGAAGGCGCCGTCGGCGACCAGGGCCATGACAAC +GAGGCCTATGAGGGGTCTGATGTCGACCCCGCTGAATCCGCTATTAGTGACATATCTGGG +TCCTACGTCGTCCCTGGCACTGCCCTCCAACCGCTTTACCAAGCCCTTGACCTCCCCGCT +GAGATTGTGGCTCGTGCAGGCCGGCTGACCGCCACAGTAAAGGTCTCCCAGGTCGACGGG +CGGATCGATTGTGAGACCCTTCTCGGTAATAAAACCTTCCGCACGTCGTTTGTTGACGGG +GCGGTTTTAGAGACTAATGGCCCAGAGCGCCACAATCTCTCTTTTGATGCCAGTCAGAGC +ACTATGGCCGCCGGCCCTTTCAGTCTCACCTATGCCGCCTCTGCTGCTGGGCTGGAGGTG +CGCTATGTCGCTGCCGGGCTTGACCACCGGGCGGTTTTTGCCCCCGGCGTTTCACCCCGG +TCAGCCCCTGGCGAGGTCACCGCCTTTTGTTCTGCCCTATACAGGTTTAATCGCGAGGCC +CAGCGCCTTTCGCTCACCGGTAATTTTTGGTTCCATCCTGAGGGGCTCCTTGGCCCCTTT +GCCCCGTTTTCCCCCGGGCATGTTTGGGAGTCGGCTAATCCATTCTGTGGAGAGAGCACA 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+---------------------------------------------------------------------gc- +---catggaggcccatcagtttattaaggctcctggcatcactactgctattgag---caggctgctctagc +agcggccaactctgcccttgcgaatgctgtggtagttaggccttttctctctcaccagcagattgagatcct +tattaacctaatgcaacctcgccagcttgttttccgccccgaggttttctggaaccatcccatccagcgtgt +tatccataatgagctggagcttta---ctgtcgcgccc-gttccggccgctgccttgaaattggtgcccacc +cccgctcaataaatgataaccctaatgtggtccaccgctgcttcctccgccctgccgggcgtgatgttcagc +gttggtatactgcccctacccgcgggccggctgctaattgccggcgttccgcactgcgcgggctccccgctg +ctgaccgcacttactgcttcgacgggttttctggctgtaactttcccgccgagactggcgtcgccctctatt +ctctccatgatatgtcaccatctgatgtcgccgaggctatgttccgccatggtatgacgcggctttacgctg +ccctccacctc-ccgcctgaggtcctgttgccccctggcacataccgcaccgcgtcgtacttgctgatccat +gacggcaggcgcgttgtggtgacgtatgagggtgacactagtgctggttataaccacgatgtttccaacctg +cgctcctggattagaaccactaaggttaccggagaccatcctctcgtcattgagcgggttagggccattggc +tgccactttgtcctcttactcacggcagccccggagccatcacctacgccctatgttccttacccccggtct +accgaggtctatgtccgatcgatcttcggcccgggt---------ggtaccccctccctatttccaacctca +t----------gctccactaagtcga-ccttccatgctgtccctgcccatatctgggaccgtctcatgttgt +tcggggccaccctagatgaccaagccttttgctgctcccgcctaatgacttacctccgtggcattagctaca +aggttactgtgggcacccttgttgccaatgaaggctggaacgcctctgaggtcgctcttacagctgtcatca +ctgccgcctaccttaccatctgccaccagcggtacctccgcactcaggctatatctaaggggatgcgccgtc +tggagcgggagcatgctcagaagtttataacacgcctctacagttggctctttgagaagtc---------cg +gccgtgattatatccccggccgtcagttggagttctacgctcagtgtaggcgctggctctcggccggctttc +atcttgacccacgggtgttggtttttgatgagtcggccccctgc---cactgtaggactgcgattcgtaa-- +----ggcggtctcaaagttttgctgttttatgaagtggctgggccagga------gtgcacctgtttcctac +----------------aacctgcagaaggcgccgtcggcgaccagggc--------catgacaacgaggcct +atgaggggtctgatgtcgaccccgctgaatccgctattagtgacatatctgggtcctacgtcgtccctggca +ctgccctccaaccgctttaccaagcccttgacctccccgctgagattgtggctcgtgcaggccggctgaccg +ccacagtaaaggtctcccaggtcgacgggcggatcgattgtgagacccttctcggtaataaaaccttccgca +cgtcgtttgttgacggggcggttttagagactaatggccc------------------------agagcgcc +acaatctctcttttgatgccagtcagagcactatggccgccggccctttcagtctcacctatgccgcctctg +ctgctgggctggaggtgcgctatgtcgct-------gccgggcttgaccaccgggcggtttttgcc---ccc +ggcgtttcaccccggtcagcccctggcgaggtcaccgccttttgttctgccctatacaggtttaatcgcgag +gcccagcgcctttcgctcaccggtaatttttggttccatcctgaggggctccttggcccctttgccccgttt +tcccccgggcatgtttgggagtcggctaatccattctgtggagagagcacactttacacccgcacttggtcg +gaggttgatgctgtttctagtccagcccagcccgacttaggttttatatctgagccttctatacctagtagg +gccgccac----------------------------acttac-----------cccggcggc---------- +---------ccctctaccc----ccccctgcac--------------cggatccttcccctactccctctgc +tccgg------------------------------------------------------------------- +-------------------------------------------------------------cgc-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------gtggtgagccggct------cctggc +gctaccgc-----------------ccg------------------------ggccccggccataacccacc +agg----------------------------------------------cggcccggcatcgccgcc----- +-------------------tgctctttacctacccggatggctctaaggtattcgccggctcgctgtttgag +tcgacatgtacctggctcgttaacgcgtctaatgttgaccaccgccctggcggtgggctctgtcatgcattt +taccaaaggtaccccgcatcct------ttgatgctgcctcttttgtgatgcgcgacgg---cgcggccgcc +tatacattaaccccccggccaataattcacgccgtcgctcctgattataggttggaacataacccaaagatg +cttgaggctgcctaccgggagacttgctcccgcctcggtaccgctgcatacccactcctcgggaccggcata +taccaggtgccgatcggtcccagttttgacgcctgggagcggaatcaccgccccggggatgagttgtacctt +cctgagcttgctgccaga-------------------------------------------------tggtt +cgaggccaataggccgacctg--------------------------------------------------- +------------------------------------------cccaactctcactataactgaggatgttgc +ac------------ggacagcaaatctggctatcgaacttg------------actcagccacagacgtcgg +ccgggcctgt---gccggctgtcgagtcacccccggcgttgtgcagtaccagtttaccgcaggtgtgcctgg +atccggcaagtcccgctctattacccaagccgacgtggacgttgtcgtggtcccgacccgtgagttgcgtaa +tgcctggcgccgccgcggcttcgctgctttcaccccgcacactgccgccagagtcacccaggggcgccgggt +tgtcattgatgaggccccgtcccttccccctcacttgctgctgctccacatgcagcgggccgccaccgtcca +ccttcttggtgacccgaatcagatcccagccatcgactttgagcacgccgggctcgttcccgccatcaggcc +cgatttggcccccacctcctggtggcatgtgacccatcgctgccctgcggatgtatgtgagctgatccgtgg +cgcataccctatgattcagaccactagtcgggtcctccggtcgttgttctggggtgag------cctgctgt +tgggcagaaactagtgttcacccaggcagctaaggccgccaaccccggttcagtgacggtccatgaggcaca +gggcgctacctacacagagactaccattattgccacggcagatgctcgaggcctcattcagtcgtcccgagc +tcatgccattgttgccttgacgcgccacactgagaagtgcgtcatcattgacgcaccaggcctgcttcgcga +ggtgggcatctccgatgcaatcgttaataacttt------------------------------ttccttgc +tggtg--gcgaaattggccaccagcgcccatctgttatccctcgcggcaatcctgacgccaatgttgacac- +-----cttggctgccttcccgccgtcttgccagattagcgccttccatcagttggctgaggagcttggccac 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+tgcagtgagtaccgtcagagcccaggggctgctgtcctgattgctggctgtggcctaaagttgaaggtggat +ttccgtccgattggtttgtatgcaggtgttgtggtggcccccggccttggcgcgcttcctgacgtcgtgcgc +ttcgccggccggcttactgagaagaattggggccctggccccgagcgggcgaagcagctccgcctcgctgtg +agtgattttctccgcaagctcacgaatgtagctcagatgtgtgtggatgttgtctctcgtg-------ttta +tggggtttcccctggactcgttcataacctgattggcatgctacaggctgttgctgacggcaaggctcattt +cactgagtcagtgaagccagtgctcgacctgacaaattcaatcctgtgtcgggtggaatgaataacatgtc- +t----------------tctgctgcgcccatgggt---------tcgcgaccatgcgccctcggcctatttt +gctgttgctcctcatgtttctgcctatgctgcccgcgc---------------------------------- +-caccgc------ccggtcagccgtctggcc------------gccgccgtgggcg-gcgcagcggcggttc +cggcggtg-gtttctggggtgaccgg--gctgattctcagcccttcg----caatcccctatattcat---- +--------------ccaaccaaccccttcgcccccgatgtcaccgctgcggccggggctggacctcgtgttc +gccaacccgcccg---------------accactcggctccgcttggcgtgaccaggccca----------- +------gcgccccgccgctgcctcacgtcgtagacctaccaca---------gctggggccgcgccgctaac +cgcggtcgctccggcccatgacaccccgccagtgcctgatgttgactcccgcggcgccatcctgcgccggca +gtataacctatcaacatctccccttacctcttccgtggccaccggtacaaacttggttctttacgccgctcc +tcttagcccgcttctacccctccaggacggcaccaatactcatataatggctacagaagcttctaattatgc +ccagtaccgggttgttcgtgctacaattcgctaccgcccgctggtccccaacgctgttggtggctacgccat +ctccatctcgttctggccacagaccaccaccaccccgacgtccgttgacatgaattcaataacctcgactga +tgttcgtattttagtccagcccggcatagcctccgagcatgttatcccaagtgagcgcctacactatcgtaa +ccaaggttggcgctctgttgagacctccggggtggcggaggaggaggccacctctggtcttgttatgctttg +catacatggctcactcgtaaactcttatactaatacaccttataccggtgccctcgggctgttggactttgc +cctcgaacttgagttccgcaacctcacccccggtaataccaacacgcgggtctcccgttactccagcactgc +ccgtcaccgccttcgtcgcggtgcagatgggactgccgagctcaccaccacggctgctacccgcttcatgaa +ggacctctatttta---ctagtactaat---ggtgtcggtgagatcggccgcgggatagcgcttaccctgtt +taaccttgctgacaccctgcttggcggtctaccgacagaattgatttcgtcggctggtggccagctgttcta +ctctcgccccgtcgtctcagccaatggcgagccgactgttaagctgtatacatctgtagagaatgctcagca +ggataagggtattgcaatcccgcatgacatcgacctcggggaatctcgtgtagttattcaggattatgataa +ccaacatgagcaggaccgaccgacaccttccccagccccatcgcgccccttttctgtcctccgagctaatga +tgtgctttggctttc-----------------------------tctcaccgctgccgagtatgac------ +cagtccacttacggctcttcgaccggcccagtctatgtctctgactctgtgaccttggt---taatgtagcg +accggcgcgcaggccgttgcccggtcgctcgactggaccaaggtcacacttgatggtcgccccctttccacc +ac-----ccagcagtattcaaagaccttctttgtcc-tgccgctccgcggtaagctctccttttgggaggca +ggtactactaaa--gccgggtacccttataattataacaccactgctagtgaccaactgctcgttgagaatg +ccgctgggcat------cgggttgctat-ttccacttacaccactagcctggg--------------tgctg +gccccgtctctatttc-cgcggttgctgttttagccccccactctgcgctagcattgcttgaggataccatg +gact---------accctgcccgcg----cccatactttcgatgacttctgcccggagtgccgccccc---t +tggcctccagggctgtgcttttcagtc--------tactgtcgctgagcttcagcgcct------------- +--------taagatgaaggtgggtaaaactcgggagttatagttta-ttt------gctt----------gt +gcccccct--------tc------tttctg------tt-----------------gcttatt-t-------c +tcatttct----gcg----------------ttccgcgctccctg---------------------aaaaaa +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>OQ286030.1/17211/1-7211 |Hepeviridae isolate ITA/2021/wild boar/337, complete genome +--------------------------------------------------------------ggtcgacgc- +---catggcggcccatcagtttattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcagactgagatcct +tattaacttgatgcaaccccggcaattggtatttcgtcctgaggtgctctggaatcatcccattcaacgagt +tatacataatgagttagaacagta---ctgtcgagctc-gggctggccgttgcttagaggtcggagcccacc +caagatctattaatgacaaccctaatgttctgcaccggtgctttctacgaccagtcgggagggatgttcagc +gttggtactccgcccccacccgcggccctgcggctaactgccgtcgctctgccctgcgtggcctccctcccg +ttgaccgcacctactgttttgatgggttctcccgctgtgcttttgccgcggagactggcgtggccctttatt +ctctgcatgacctttggccagctgacgttgcggaggctatggcccgacatgggatgacacgtttatacgccg +cactacacctt-ccccctgaggtgctgttgccacccggtacctaccatacaacttcgtaccttttgattcat +gacggtgatcgtgctgtcgtgacctacgaaggtgacactagtgcgggatataatcatgatgtttctatcctc +cgtgcgtggattcgcacgactaagatagttggtgaccacccgttggtgatagagcgtgtgcgggcgatcgga +tgtcattttgtgttgctactcactgcggcccctgagccgtcacccatgccttatgttccataccctcgatca +acagaggtgtatgtccgctctatttttggccccggg---------gggtccccgtccttgtttccgtcggct +t----------gctctaccaaatcta-catttcatgccgtcccagttcatatctgggaccggcttatgcttt +ttggcgccaccttggatgaccaggcgttctgctgctcgcggctcatgacctatcttcgtgggatcagctaca +aggttactgtaggtgcccttgttgccaatgagggttggaacgcctcagaggatgcccttactgctgtaatca +ctgcagcgtatttgactatctgtcaccagcgctacctccgcacccaggcaatatccaagggtatgcgccggt +tggaggtcgagcacgctcaaaagtttattgtgagactttacagttggctatttgagaaatc---------tg +gccgcgattatatccccggccgtcagctccagttctatgcacagtgtcgccgctggttgtcagcaggtttcc +atctcgaccctagggtgcttgtttttgatgaatcagtgccctgc---cgctgtagaacgtttcttaagaa-- +----agttgcgggaaaattctgttgttttatgaagtggctggggcagga------atgcacttgcttcttgg +----------------agccggccgaaggtttggttggtgactgcggc--------catgataatgaagcct +acgagggttctgaggttgaccaggccgagcccgcacaccttgatatttcggggacctatgctgttcatgggc +gccagctcgaggccttgtatagagcgctcaacattccacatgatattgctgcccgagcatcgcgtctgaccg +ctactgttgagctcgttgcaggcctagatcgtttggagtgccgcactgtgctcgggaataagacctttcgga +caacggtggttgacggcgcccatcttgaggctaacggccc------------------------agaacagt +atgttctttcgttcgacgcctcccgtcagtctatgggagctgggtcgcacagccttacctatgagctaaccc +ctgccggcttgcaggtaaagatctcgtcc-------aatggtctggactgcaccgcaacatttccc---ccg +ggcggggcccccagcgccgcgccgggggaggtggcggctttttgcagcgccctttacaggtacaacagattt +acccagcggcattcgttgacgggcggtttgtggctgcaccctgaggggctgctgggtattttccctcccttc +tcccccgggcatctttgggagtccgccaaccccttctgcggggaaggaaccctttacacccggacttggtct +acatctggcttttccagtgatttctccccccccgaggcggccacctctgcgccggccgccattca----ggg +gccacctg---accctacacctcccgccagtgacat-----------------ttgggtgct---------- +---------gccgccactc----tctgaggagt--------------ttcaggtcgacgtggaaccagcccc +cctca------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctcccgaacctgcctctctacccagg +tccgttgagcctagg-------------------------------------gtccctgtttgtaagccttc +gacaccacc--------------------------------------acctcttcgcacccgccgcc----- +-------------------tcctttacacctacccggacggcgctaaggtgtacgctgggtcactgtttgag +tcagactgcgactggttggtcaatgcatcaaaccccggtcaccgccctgggggcggtctctgtcacgccttt +tatcaaaggttccctgagtcgt------tccacccgactgaatttattatgcgtgacgg---tcttgctgct +tacactttggtcccccgccccattattcatgcagtggcccctgactatagggttgaacagaacccaaagagg +ctcgaggcagcataccgggagacttgctcccgccgtggaactgccgcctacccacttttaggcgcgggtata +tatcaagtccctgtcggcctcagttttgacgcctgggaacgcaaccaccgccccggcgatgagctttatctg +accgaccccgccgcttcc-------------------------------------------------tggtt +tgaggctaataagcctacgca--------------------------------------------------- +------------------------------------------gccggctcttacgataactgaggatacagc +cc------------gcacggccaacctggcactggagatcg------------atgctgctacagaggtcgg +ccgtgcctgt---gccggctgcaaagttaatccaggtattgtgtactatcagttcactgctggggttccggg +ctcggggaaatcgaggtctatacagcagggggatgttgatgtggtggttgtccccacccgagagcttcgtaa +taattggcgccgccgaggttttgccgcctttacaccccacacggcggcccgcgtcactacgggccgccgcgt +tgtgattgacgaggccccatcccttccgccacatttactgctgctgcatgtgcagcgggcttcgtcggtcca +tctccttggcgacccaaaccaaatccctgctatagactttgagcacgctggtctggtccccgctatacgccc +tgagcttgcacctaccaactggtggcatgtcacacaccgctgccctgcggacgtgtgtgagcttatacgtgg +agcctaccctaagatccaaactacgagtcgtatactgcgatctctgttttggaatgag------cccgccat +cggccaaaaattggttttcacacaggctgcgaaggctgccaaccctggtgcgatcacagtccatgaggccca +gggtgccaccttcacggagactacaatcatagctacggccgacgccaggggtctcatccaatcttcccgggc +ccatgccatagtcgcactcacccgtcatacagagaagtgcgtcatattagatgcccctggcttgctgcgtga +ggttggtatatcagatataattgttaacaacttt------------------------------ttccttgc +tgggg--gagaggtaggtcaccatcgtccctctgtgataccccgtggtagtcctggccagaatcttgagac- +-----gctgcaggcttttccaccttcttgtcagatcagtgcttaccatcagttagctgaggagcttggccat +cgcccggctcctgtcgctgcagttctgcccccctgccctgagctcgagcagggtttgttatatatgccccag +gagctcacggtgtctgatagtgtgttagtttttgagctcacggacatagtccattgccgtatggctgccccc +agccaaaggaaggctgttttatccacacttgtagggaggtatggccgcaggacgaagttatacgaggcggcc +cattctgacgtccgtgagtctctagctaggttcatccccactattgggcccgtccaggctaccacgtgtgag +ctatacgaattagtcgaggctatggtggagaagggtcaagatggctccgccgtgttggaactcgacctctgc +aatcgcgatgtgtcgcgtattacatttttccaaaaggactgtaataagtttactaccggggagaccatcgcc +catggtaaggtcggccagggcatctcagcctggagcaagactttctgtgccctgtttggtccgtggttccgt +gctatcgagaaagagatactagcacttctcccgcctaatatcttttacggcgatgcttatgaggactctgtg +tttgccgctgccgtttccggggcaggaacgtgcatg---gtgtttgagaatgacttctcagagtttgatagt +actcagaacaacttctctct------------------cggtcttgagtgtgtgattatggaggaatgcggc +atgccccagtggctgatccggttgtatcatttggttcggtctgcctggatcttgcaggcgccgaaggagtcc +cttaaggggttttggaagaagcactctggagagcctggcaccctcctctggaacaccgtctggaacatggca +attatagcacactgctatgagttccgcgatttcagggttgccgcctttaagggtgatgattcggtggtcctt +tgcagtgactaccgccaaagtcgcaatgcagcagctttgattgcaggttgtgggcttaaattgaaagttgac +tatcgccctattggactgtatgctggcgtggtggtggcctctggtttggggacattacccgatgtggtgcgt +tttgctggtcggctttccgagaagaactggggcccaggccccgaacgggctgagcagctacgccttgcagtt +tgcgactttcttcaggggttaacgaatgtggcgcaggtctgtgttgatgttgtatcccgtg-------ttta +tggagttagccccgggctggtacataaccttatcggcatgctgcaaactattgctgatggtaaggcccattt +cacagagactgttaaacctgtgcttgacctcacaaactctattatacagcggatggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgtgccctagggctgttct +gttgctgttcctcttgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccgggcagccgactgcgc------------gtcgtcgtgggcg-gcgcagcaacagtgc +cggcattg-aacacaaatttgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgttccacaatccggggctggagctcgccctc +gacagccaccccg---------------ccctcgggtttcctcttggcgcgatcagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctgcccca---------gccgggcctgcgccgctgac +tgccgtttcaccggctcccgacacagctcccgtgcctgatcatcattcgcgcggtgctatattacgacggca +gtataacctttctacgtctccgcttacatcatctgttgcttcaggcaccaatttagttctatacgctgcccc +actaaaccctctcctccctcttcaggatggcactaatactcatattatggctactgaggcatctaattatgc +ccagtaccggattgttcgagccacgatccattaccgccccctggtgccgaatgctgtcggcggctggcgaaa +tgctacttccttttggcctcagactactactacccccacatctgtcgacatgaactctattacttctactga +tgtcaggattctggtccaacccggcattgcctccgagttggttatccctagtgagcgcctccattatcgtaa +tcagggatggctctctgttgagacttcagggtgggccgaagaggaggttacctccggcttggtaatgctttg +catccacggctctcctgttaattcttataccaacacccctaatgccggggcgcttgggcttcttgactttgc +actggcgcttgggtttaggaacttgacacccgggaacactaacacccgtgtgtcccggtattatcgcacagc +ctgtcactggctgcgccgcggtgctgatggcaccgccgaactcaccaccacagcggccacacggtttatgaa +ggatttacatttca---ccggtacgaat---ggggtcggtgaggtcggccgtggtattggttcgacactgtt +caaccctgttgatacgcttctcggaggtttgccgacagaatcgatttcgccggttggccgcacaacatttct +atcctgccctgttgtctcagccaatggcgagccgaccgttaagttatatacatcctgtcgagaaacctggca +ggataaaggtattgccatcccacatgatatagacctgggcgattcccgtgtggtcatccaggactatgataa +caatacgcagcaggatcggccgactcccccgcccgccccgtctcgcccattttctgtccttcgtgctaatga +tgttttgtggctttc-----------------------------tcttaccgctgttgagtatgac------ +cagactacatatgggtcgaccaccaacccgatgtatgtccctgacactgcaacattcgt---cactaccacc +acaggggcccaggctgctgctcgctctcttgattggtctaaggtcaccctggacggccgccctctcaccacc +at-----tcagcagtactctaaaacattctatgttc-tctcgcttcgcgggaaattgtccttctgggaggcc +ggcataaccaag--gctggttacctttataattacaatacaactgccagtgatcaaattttgattgaaaatg +cagctggccac------cgtgtcgctat-ttccacctacaccactagcttggg--------------tgctg +gccctgtgtcggtctc-tgcagtaggtgtattagccccacacccagcacttgctgttctggaggacactgtc +gact---------acgctgtccgcg----ctcatacttttgacagtgactgcccggagcggccgcact---t +tgcctgccaggggtgtgcctttcagtc--------caccattgctgagcttcagcgcct------------- +--------taaatgaaaggtaggtaaaacctgggagtcttaattaa-tt----c--cctt-ttt------gt +gccc-tct--------tc-ataa-ctttc---ggt-t----t----------------attt-t-------t +tcttttct----gc----------------tcttcgcgctccgga---------------------at---- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW835252.1/17224/1-7224 |Paslahepevirus balayani isolate DcHEV362SIAUJeddahSaudi_Arabia, complete genome +---------------------------ggtagacca-cgtacgttgctcgcgtacgt-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcatcacaactgccattgag---caagccgctctggc +agcggccaattccgccttggcgaatgctgtggtggttcggccgtttctttcccgcttgcagactgagattct +tatcaatttaatgcaacctcgccagcttgttttccgccccgaggttttctggaatcatcccatacagcgggt +cattcacaatgagttagaacaata---ttgccgagccc-gtgccggacgctgccttgaagttggggctcacc +cacgctctataaatgacaatcccaacgtccttcaccggtgtttccttcgtcctgtggggcgtgacatacaac +gttggtacacagccccaacgcgcggtccggctgccaactgtcgtaggtctgcactccgtggtctcccgcctg +tcgatcgcacctactgtttcgaaggtttttcgcggtgctctttcgccgcagagaccggggttgctttgtatt +ctttgcatgacctgtggccggccgacgttgctgaggcgatggctcggcatggcatgacccgcctgtacgcag +ttctgcacctt-ccacctgaggttcttctgccacctggtacttatcacactacctcatacctgctgattcac +gacggccagcgggctgtcattacttatgaaggtgacaccagtgccggttacaaccatgatgttgccatactc +cgcgcctgggtccgtacgaccaaggttactggggaccatcctttggttattgagagagttcgtgcgattggc +tgccactttgtcctgctcctcactgcggcacccgaaccatcgcctatgccgtatgtcccatatcctcggtct +acggaggtttatgtgcggtcaatatttggccctggt---------gggtcgccttctttgtttccatctgcc +t----------gttcgactaagtcta-ccttccatgcagttccagttcacatttgggaccggctcatgctct +tcggcgccacattggacgatcaggcgttttgctgctcccgtctcatgacctaccttagggggataagctaca +aggtcacggtcggtgctctagttgccaacgaaggctggagtgcgtcggaggatgcgctcactgcagtgatta +cggccgcgtatcttaccatctgccaccaacgctacctccgcacacaagctatttctaagggcatgcggaggc +tggaattagagcatgcacagaagtttataacaaggctctatagttggctttttgagaagtc---------gg +gtcgcgattacattccaggccgccagctggaattttatgcacagtgtaggcgctggctttctgccgggttcc +atctcgaccctcgcgtccttgtttttgacgaggcggcaccctgc---cgttgcaggagctctctacggaa-- +----ggccgttagccggttctgctgtttcatgcggtggctgggtcagga------gtgcaactgcttcctcc +----------------agcctgtggacggtcttatcggtgatgaaggc--------catgataatgaggcct +atgagggctccgaagtcgatcctgcagagccggccgccccagacatcgatggcacctacacggtttctgggg +cgcagctttctgcgttataccgagctctcggccttcccaccgaccttgccgcccgtgcctctcgccttacag +ccaccgttgagttatcttcctaccccggccgtattgagtgtaagacaacacttggcaacaaagtcttcctta +cgagttttctagatggctctcgtttggaagctaacggtcc------------------------ggaggagt +ttgtcctttcttttgatgctgcccgtcaggccatgtcagctggcccttatagccttacttatgaagtaacac +ctgctggcttgcgggtccatgttgtctct-------agtgggcaggactgtattgttaccttccct---cct +ggcccagcacctgcggcggcccccggcgaggttagcgcattttgttcggcgctataccggtttaaccgatct +gtccagcggcattcactcttgggtacattatggtaccatccggagggcctactgggcctctttccgcccttc +tcgccgaatcatatctgggattctgctaacccgttttgtggggagagcactctttacacccgtacctggtct +gtttctggcttttctagtgatttcgcaccagtcggggtatctgacccggcacctgacatatccgctgccgga +gccatct----gcccccccccgcctgtcagccgtca------------------------------------ +---agttagcttacagcca----acacagg------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tccctgaacctactcccctatctgag +ccgggggtacctacacccgcaagttcgaccatg-------------------gtgcccattgcacagggcca +tacatcgcc--------------------------------------ggcccgccgcaaccgccgtc----- +-------------------tactttttacctaccccgatggagctaaagtttattcgggttcgctctttgaa +tctgaatgcacctggttgattaatgcctcaaatcccggccaccgtcccggcggtggcctttgtcatgctttc +tttcagcgttttcccgaatctt------ttgaccacactaaatttgtcatgcgtgaggg---tcttgccgcc +tataccctcacacctcggcccatcatccatgctgtggcccccgactatcgggtcgaacataacccgaagagg +cttgaagccgcttatcgtgagacttgctcacgtcttgggacagcggcttacccgttgcttggctcgggtatc +taccaagttccggttggccccagttttgatgcctgggagcgtaaccaccgccccggggatgagctttatctg +accgatgccgcagccact-------------------------------------------------tggtt +tgaaaataataagccgtctca--------------------------------------------------- +------------------------------------------gccggccctgaccatcactgaggacactgc +ga------------gaactgccaacctcgctcttgagatag------------atgctgccactgagatagg +tcgggcctgc---tccggctgccgtgtcgaccctggcgtggttcattaccagttcactgcaggtgttcccgg +ctccggaaagtcgcggtcgattcagcaaggcgatgttgatgttgttgttgtcccgacgcgtgaactccgcga +tagctggcgacgccgtggctttgcggccttcaccccgcacacagcggctcgggtgacccgtggccgccgggt +tgtgatcgatgaggccccttcccttccgccccacctgttgcttttgcatatgcagagggctgcctccgttca +tcttctcggtgacccgaatcagatcccagctatagactttgagaacacggggctggtcccggcaattcgccc +cgagctcgtccccacaagctggtggcacgttacccaccgctgcccggctgatgtctgtgagctgatccgcgg +ggcttatccaaaaatccagactgccagccgtgtcctgcgttcgcttttctggggtgag------cccccagt +tggccagaagcttgtgttcacacaggcggccaaggctgccaaccctggtgcaattacggttcatgaggcgca +gggggcgacattcaccgccactactatcattgccacagctgatgcccgagggttgattcagtcttcacgagc +gcacgcaattgttgctctgacccgtcacactgagaagtgcgtggtgcttgatgctcctggccttcttaagga +aattggcatatctgattctatcgtcaacaatttc------------------------------tttttgtc +cggtg--gagagattggtcataacaaaccgtcagtcatacctcgtggcacccctgacctcaatgctgccac- +-----gctagatgctttcccgccctcctgtcagatcagtgcttattatcagcttgctgaggagcttggccat +cgccctcagcctgttgcagcggttttgccgccatgccctgaacttgagcaggggttgctctacatgcctcaa +gaacttacggcctccgatagtgtcctggtattcgagctcaccgatatagtccactgtcgcatggctgcgcca +agccagcggaaggctgtgctttccaccctggttggcaggtatggccgccgtaccaagctttatgaggcggcc +cattcggatgttcgtgagtccttagctaagtttattcccaccatcggccctgtgcaggccaccacttgcgaa +ctttatgagcttgttgaagccatggtggagaagggccaggacgggtcggccgtcttagagttggatctgtgc +tcccgtgatgtgtcccgtataacattcttccagaaggactgcaacaagttcaccaccggtgagacgattgcc +catggcaaagttggccagggtatatccgcgtggagcaaaacattctgtgccctattcgggccttggtttcgt +gccattgagaaacagatccttgccctccttcctcagaatgtgttctacgctgatgcttatgatgactctgtt +ttctctgcagccgtgtctggtgcaaaggccagcatg---gtttttgagaatgacttttctgagtttgacagt +acacaaaataatttttcatt------------------gggtcttgagtgtgttattatggaggagtgcggt +atgcctccgtggctaatccgcctttaccatctagtccgttccgcctggattctccaggcgcctaaagagtca +ctgaaaggtttttggaagaagcattccggcgagcctggcacactgctctggaacaccgtttggaatatggct +attatagcgcattgttatgagttccgcaatctccaggctgccgcttttaaaggtgatgactctatggtgctc +tgcagtgactaccgccagagccgcaatgctgctaccctcattgctggttgtggtctaaagctgaaggtggac +taccgaccgatcggcctgtacgccggcgttgtggtagctccaggtcttggggccctcccggatgttgtccgg +tttgccgggaggttgtctgagaaaaactggggccccgacccagagcgtgctgaacagctccgtcttgctgtt +tgtgatttcctcaggaagctgacgaatgttgctcagttgtgcgtggatgttgtttctcgtg-------ttta +tggtgtcagcccaggtctggtacataacctcattggtatgctccagaccattgctgacggcaaggcccactt +tactgagacaatcaaaccagttcttgacctcacagacgctatcatccagcggcgtgaatgaataacatgtgc +c----------------tttgcatcgcccatggg------------tacaccatgcgccctcgggctattct +gctgttgctcctcttgtttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagtcgtctggcc------------gtcgccgtgggcg-gcgcagcggcggttc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----cactcccctatattcat---- +--------------ccaaccaacccattcgccgctgatgtctccgcagcatccaggtctgggactggccttc +gccaatcgacccg---------------accactcggtaccgcttggcgtgatcaatccca----------- +------gcgcccccccgctcccactcgccgccgatctgcccca---------cccggggctgcgccgctaac +tgctgttgctcccgccccaggcaccgctcccgtcccagacgttgattcacgtggcgccgttttacgccgcca +atataatctttcaacttcccctcttacatccactgtcgcctctggtacaaaccttgttctttatgccgctcc +actcaatccgcttttgcccctccaggacggtactaacacccacattatggccacagaggcgtctaactatgc +tcagtatcgcatagttcgtgcgactattcgctatcgccctctggtcccaaatgccgttgggggttatgctat +ttctatctccttttggcctcagaccactactacaccaacgtcagttgatatgaattcaattacttcgactga +cgtccggatagttgttcaacctggtctcgcctccgaacttgtgatccctagtgaacgcctccattatcgcaa +tcaaggctggcgctctgttgagacatctggggttgcggaggaggaggcaacatctggtttggttatgctctg +tgttcatggctcccctgttaattcgtatactaatacaccttacactggtgctttaggtttgctagactttgc +ccttgagcttgagtttcgtaatcttacacctggcaatactaatacccgcgtctcccgttattctagtactgc +tcgccatcgcctcaagcgtggtgctgacggcacagctgttttaactactacagcggccactaggtttatgaa +ggatctgcatttta---ctggtatgaat---ggtctaggtgaggttggtcgtggtatagcgttaacgctttt +caatcttgctgacaccctccttggcggtttcccgacagaattgatttcgtcggctggaggccagctctttta +ctctcgtccagtcgtttcagccaatggcgaaccgtctgtgaagctttacacctctgtggagaatgctcagca +ggacaaaggcatcgctatcccccacgatattgacctcggtgagtcgcgtgttgtcatccaggattatgataa +tcaacatgagcaggaccggcctaccccgtcccctgccccctcccgacccttctctgtgcttcgtgctaatga +tgttctttggctttc-----------------------------actgactgctgccgagtacgat------ +caggcgacatatgggtcctccactgacccggtttatgtttctgacacagtcacttttgt---caatgttgcc +accggcgcccaggccgtggcccgcacccttgactggactaaggtcacgctggatggtcagcctcttaagacc +at-----caatcagtactctaagacattctttgtcc-tcccgcttcgtggtaagctgtctttctgggaggcc +ggcaccgtcaaa--gccggttacccgtataattacaataccacagctagtgaccatatactaattgagaatg +cagcaggccat------cgtgttgcgat-ctccacttataccacaagcttagg--------------tgccg +gaccggttgccatttc-ttgtgtaggggtgctagcgccccatgctgcccttgccgttttggaggataccact +gacc---------atccagctcggg----ctcatacatatgatgacttctgccctgagtgccgtactc---t +cggcctccagggttgtgcatttcagtc--------tactattgctgagctgcagcgtct------------- +--------taagatgaaggtgggtaaaactcgggagtattaatcta-tt----ct-tctt----------gt +gccc-tcct-------tc-----tttcac-------tc-ttt----------------tatt-t-------t +tcttttct----gcg----------------tttcgcgctccctg---------------------aaaa-- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MT920909.1/17233/1-7233 |Hepeviridae strain FCME2016rab81, complete genome +--------------------------tggcagacca-catatg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcatcactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggtccggccttttctttcgcgcgcgcagactgagattct +tattaacttgatgcaaccgcgtcagttggttttccgccctgacgttttctggaatcaccccattcagcgtgt +tatacataatgaattagaacagta---ctgccggaccc-gggctggccgctgtcttgagattggagctcatc +ccaggtctattaatgataatcctaatgtattacatcggtgttttatccggccagttggtagagacgttcagc +gatggtactctgccccaactcgcggcccggctgcgaattgccgccgttctgccctgcgaggtctcccgcctg +tcgaccgcacttattgttttgacgggttctctggttgccactttgctgctgagactgggctggcactttact +cattgcatgacctttcccccgccgatgtcgctgaggccatggcccgtcacgggatgactcgcctgtatgcag +tgctccacctg-ccccctgaggttctgctgccacccggcacctaccacacgactacgtacctcctgattcat +gatggaagtcgcgtagttgtcacatacgagggtgacactagtgctgggtataaccatgatgtttccacgcta +cgtgcctgggtccgtacaactaaggtaaccggtgatcaccctttggtaattgagagagtccgtgctattggt +tgccattttgcactgctcctcacagctgcccctgaaccttcacctatgccgtatgttccataccctcgctcg +actgaggtgtatgttcgatctatattcggccctggc---------ggctcgccatctctttttccatcagcc +t----------gctccacaaaatcca-cattccacgcagtcccagttcatatctgggaccggctaatgcttt +ttggggcaaccctagatgatcaggccttctgctgctcgcggctcatgacttacctacgtgggatcagctata +aagttactgttggcacacttgttgccaatgaaggctggaatgcttcagaggatgcccttactgccgtgatta +cagcagcgtacttgactatttgccaccaccggtatctccgcacacaggcaatatcgaaaggcatgcgtcgat +tggaagttgaacatgcccaaaaattcgtcacaaggctgtacagctggctgtttgagaagtc---------tg +gtcgtgattatatccccggccgccagcttgagttttatgcgcagtgccgccgctggctttcggccggtttcc +accttgaccctagggtgctcgtctttgacgagtcaatgccttgt---cgttgcaggagcttcttgaagaa-- +----agtccccggtaagttttgctgttttatgcggtggctcgggcagga------atgcacttgtttcctag +----------------agcctgcagaaggtcttactggtgattgtggc--------catgacaatgaggctt +atgaagggtctgaggtggacactgccgagcctgtctgccttgacgtctccgggacctatgctgtacacgggc +gccagcttgaggccctttatagtgcactcaacatcccccccgacctcgccgcgcgggcgtcccgactgactg +ctactgtcgagctgcttgctagtcctggccgcctcgaatgccgcactgtgctcggaaacaaggtgttccgta +caaccatagttgatggtgctcagcttgaagcgaatggccc------------------------tgagcagt +atgtcctcacttttgacgattctaaccaatcaatgggggctggacaacatagtctcacttatgctcgcaccc +ctgctggcctggaggttaggattttgtcc-------aacggtttggattgtgctgccacttttccc---ccg +ggtgccgcaccctctgctccgccgggggaggtggcagcgttctgcagcgctctatacaggtttaacaggtgc +acccagcggcattctttaactggtggactgtggcttcaccctgaggggctgctgggtttgttcccaccattt +tcgcctgggcatttttgggactctgcgaaccctttttgcggcgagagtaccttgtatactcggacttggtca +acatctggtttttctagtgacttccaccctcctgaggcggtggccaccgcccctgtgcctgatga----cct +gccgcccccgcctacccattcagccgacggggg--------------------ctggctgcg---------- +---------gtcatcaccg----tctttgaggc--------------aggtggttcccacaccaccc---cc +ctctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ccagggtgtccgttaacctgcctgac +tctgttgtggctgag-------------------------------------cctcc------taagccacc +agcacctcc--------------------------------------accgacccgtactcgccgcc----- +-------------------tcctttacacctacccggacggcgctaaggtgtacgcaggctccttattcgag +tcggattgtgactggctggtaaatgcatctaatcctggtcaccgtccaggtggcggcctctgccatgctttt +tttcaacgcttccctgagtcgt------tccgctcggctgacttcattatgcgtgaagg---ccttgcagcg +tatacactaactccccgcccgattatccatgctgtggcccctgattacaggactgcacagaaccctaaaaga +ctcgaagcggcgtatcgcgagacttgctctcgccgcggcaccgctgcctacccgctactcggtgcggggatt +taccaagtcccggtaagcttgagctttgacgcatgggagcgcaaccaccgtccgggtgatgaactttatttg +actgaacctgctgttgct-------------------------------------------------tggtt +cgaggccaacaaaccgaccca--------------------------------------------------- +------------------------------------------accggccttgacaataactgaggacacagc +cc------------gtacagccaatttagccttggaaattg------------actctgcgactgaagtggg +ccgtgcctgc---gccggttgcgctgttagccctggagttgtccactaccggttcaccgccggtgttccggg +ttccggcaaatctcggtctattcaacagggtgacgttgatgtggttgttgtacccacccgtgagctccgtaa +cagctggcggcgtcgcggatttgctgctttcacacctcattcggccgcccgtgtcactagcggtaggcgcgt +tgtgatcgatgaggccccgtcattaccaccgcatttgctgttgctccacatgcagcgggcctcgtcggtcca +ccttcttggtgatcctaatcagatacctgctattgattttgaacatgccggcttggttccggcgatccgccc +tgagcttgcaccgacctcatggtggcacgttacgcaccgctgccctgctgatgtgtgcgagctcatacgcgg +agcatatccaaaaattcaaaccacaagtcgtgtgctacgctctttattctggggccag------cctgcgat +tggccaaaaacttgtttttacgcaggcggctaaggcggccaaccctggcgctattactgttcatgaagccca +aggggctacattcactgagactactattattgctacggcagatgcccgcgggctgattcaatcatcacgggc +tcatgctattgtggcactgacccgccacacagagaagtgtgtgattctggatgctccagggttactccgcga +ggttggcatatccgatgcaattgttaacaatttc------------------------------tttctggc +cggcg--gagaagccggccaccaccgtccgtcggtcattccccgcggcaacccggacaagaacttggacac- +-----cttgcaggcgttccccccatcctgccaaattagtgcataccaccagttggctgaggagctcggccac +cggccggcccctgttgctgccgttttaccgccatgccctgaacttgaacaggggttgctttacatgccgcag +gagcttacagtgtctgatagtgtgcttgtttttgagcttacggatattgtccattgccgcatggccgcccct +acccagcgaaaagctgtcctatccacattggtaggcaggtatggccgtcacacgaggctgtatgaggctgcc +cactctgatgtccgtaggtcgttggccaaatttattcctactattggtccggtccatgccaccacgtgcgag +ttatatgagctggtccaagctatggtggagaagggccaagacggcactgctgtgctagagcttgacctctgt +aatcgtgatgtctcacgtataacattcttccagaaggactgtaataagttcactactggtgaaaccatagct +cacggcaaggtgggccagggtatttcggcttggagcaaaaccttctgtgccctatttgggccgtggttccgt +gccattgaaaaggagatcttgaccctgctacctcctaatgtcttctacggtgatgcttatgatgaatcggta +ttctctgctgcagtctcgggagctggctctagcatg---gtttttgagaatgacttctccgaatttgatagt +acccaaaataatttctccct------------------tggtctcgaatgtgctattatggaggagtgtggt +atgccgcagtggcttgttcggctgtaccacctggtccgctcatcttggatcttgcaagcccctaaggagtcg +ctgaaaggcttttggaagaagcactctggtgagcccggtaccctcctttggaacaccgtctggaatatggca +atcatagctcattgctacgatttccgtgacctgaaggccgccgcatttaagggagatgattcaatggtctta +tgtggtgcctatcgcccgagtcacaatgccgctgccttgattgctggctgtgggttgaagttgaaggttgat +ttccgccctatcggcctttttgctggtgtcgttgttgcccctggtcttggggcacttcctgatgtggttcgg +tttgccggccggctttctgagaaaaattggggccctggccctgagcgtgcggaacagctgcgcctagcagtc +tgtgatttccttcgaaagctaacgaatgttgcgcaagtttgcgtggatgtcgtgtcacgtg-------cata +tggggttagtccaggtctggtgcataaccttattggcatgctgcagactattgctgatggcaaggctcactt +taccgagagtgttaaacctgttttggaccttacaaattctattatacagaggattgaatgaataacatgtc- +c----------------tgtgcattgcccatggg------------tacaccatgcgccctcgggctattct +gctgttgctcttcgtgtttctgcctatgttgcccgcgc---------------------------------- +-caccgg------ccggtcagccctctggcc------------gccgtcgcgggcg-gcgcagcggcagttc +cggcagtg-gtttctggggtgacagg--gttgattctcaacccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgcagatgtcttttcacaacccggggctggagctcgccctc +gacagcccccccgc------------ccccccctcggttccacttggcgtgaccagtccca----------- +------gcgcccctcccttccctcccgtcgtcgatctgcccca---------gttggggctgcgccgctgac +tgctgtgtcgcctgcacccgatacgcccccggttcctgacgttgactcgcgtggtgcgatactgcgacgtca +atacaatctgtccacttcccctctgacttcaactgtggcctcgggcactaatcttgtcttgtatgcagcccc +gctttcccccctcttgccccttcaggacggcaccaacactcacatcatggcgactgaagcatctaattatgc +tcagtaccgtgttattcgtgcaacaattcgctatcgcccattggtgccgaacgctgtcggcggctatgcaac +ctctatctcgttttggcctcagactaccactactcccacatctgttgacatgaattctattacatccactga +tgtcaggattctggtccagcctggtgttgcctccgagctggtcatcccgagtgagcgcctccattatcgtaa +ccagggttggcgctctgtcgagacatctggtgtggctgaggaggaggcaacttccggtcttgtcatgctctg +tattcatggttcccccgtcaattcttacaccaacaccccttacactggggcattggggctccttgacttcgc +actcgagcttgagttcaggaatctgacccctggaaacactaatacccgcgtttcccgctacactagtacagc +ccgccatcggctccgccgtggtcctgacgggactgctcaactcacaaccactgctgcaacacgttttatgaa +ggatttacatttta---acgggtcaaat---ggggttggtgaaattggtcgtggtatagctatgacgctctt +taaccttgctgataccctactcggcggtctgccgacagaattgatttcgtcggccgggggtcagttattcta +ctcccgccccgtcgtctcggccaatggcgagccgactgttaagctttatacgtctgtcgagaatgctcagca +ggacaagggcattgctataccgcacgatattgatttaggtgattctcgtgtggtgattcaggattacgacaa +tcaacatgaacaggaccgacccacaccgtcgcctgccccctctcgccctttctcagtcctacgtgctaatga +tgtgttgtggctctc-----------------------------cctcactgctgccgagtacgat------ +cagaccattttcggctcgtccactgaccctgtgtacacctcggacaccgtcacgttcgt---taacgtggcc +acgggtgctcaagccgtggcccgctctcttgactggtctaaggtcactttggatggccgtcccctcacgaca +at-----ccagcagcattctaaaacattttatgtgc-taccgcttcgtgggaagttgtctttttgggaagcg +ggcactactaaa--gctggttacccttataactataacaccgttgcaagcgaccagattttaattgacactg +cctctggtagc------cgtgttgctat-ttccacttatactaccagcttggg--------------cgctg +gccctgtgtccatttc-tgcggttggagtcttggccccccactcggctttggccgtgcttgaggatactgtt +gacc---------accctgcacgag----cccacacttatgacgatttctgcccagagtgccgagccc---t +cggcttacagggctgtgctttccaatc--------caccatcgctgaacttcagcgtct------------- +--------taaaatgaaggtaggcaaaacccgggagtcttaattaa-tt----ct------gtt------gt +gccc-ctt--------ctgtgaa---------tgc-tt--------------------tatt-t-------t +ctttttct----gcg----------------tctcgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaaaaa------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW002522.1/17190/1-7190 |Hepeviridae isolate AUS/VIC/DDS1/2018, partial genome +------------------------------------------------------------------------ +----------------------------------------------gccatcgag---caagctgctctggc +tgcggccaattctgccttggcgaatgctgtggtaattcggccgttcctatcccggacacagactgagattct +tattaatcttatgcaaccccgtcaactggttttccgcccggaggttttctggaatcaccccatccagcgcgt +catacataacgagctggagcagta---ctgccgcgccc-gcgcgggacgttgtctcgaggtcggggcccacc +cgaggtctatcaacgataacccaaatgtcctccaccggtgcttcctccggcctgtagggagagatgtccagc +gctggtactctgcccccacccgaggccccgccgctaactgccgtcgctccgcgctgcgcggcctccctccag +ttgaccgcacctattgctttgatgggttctctggttgtgttttcgcagctgagaccggcattgccctttact +cactacatgatttgtggcctgctgatgttgcagaggcaatggcgcgccacgggatgacacgcttgtatgcag +ttttacacctc-ccccccgaggtcctgttgccgccaggtacttaccatacaacctcttacctcctgatccac +gacggcagtcgtgccgtcgtcacttacgagggtgacaccagcgccggttacaaccatgatgtctccatcctc +cgtgcctggattcgcacgacgaaaattgtcggcgaccacccgctggtgatagagcgcgtccgcgccattggt +tgccattttgtattgttgcttactgctgcccccgaaccatcacctatgccctatgtcccttttccccgttca +acggaggtttatgtccgctcaatttttggtccgggt---------ggctcgccctccctttttccgtcagcc +t----------gttccactaagtcta-ccttccatgccgtccctgtccatatttgggacaggctcatgcttt +ttggcgctactctggacgaccaggccttctgttgctcgcggcttatgacctacctccgtggtattagttata +aggttactgtcggcgcccttgtcgccaatgaggggtggaatgcctctgaggacgctctcaccgcggtgatca +ccgcggcttaccttaccatttgccaccagcgttaccttcgcacccaggcgatttctaaaggcatgcgccggt +tggagcttgagcatgcccagaagttcgttaccaggctttacagttggctgtttgaaaagtc---------tg +gccgcgattacatccctggtcgccagctccaattctacgcacagtgtcggcgctggctttctgccggcttcc +atttggaccctagagtgctcgtcttcgatgagtccgtgcactgc---cgttgtaggagttttgtaaagaa-- +----tgtggctagaaaggtttgctgcttcatgaagtggcttggtcagga------gtgtacttgcttcttgg +----------------agcctgcagagggcttgcttggcgaccttgga--------catgataatgaggctt +atgaggggtccgaggtcgaccccgccgaacctgccgccctcgacatatctgggacctacactgttcatgggc +aactgttggcggacctctatagagcactcaatgtaccggatgacatcgttgcccgggccgcccgcttgtcag +ctactgtcgagcttaccgctggccccgggcggcttgagtgtcgcaccactttgggtaacaagaccttccgca +ctacaattgttgacggtgcccggctagaggcaaatggccc------------------------cgagcagt +atgtcctctctttcgacgaggctcatcagtgtatgggcgctggaccgcatagccttgcgtacgagctcaccc +ccggtgggctacgggttaaaatttcatct-------aatggcttagactgcacggcagttttcccc---cct +gggcaggccccgagcgcggctgctgcagaggttacagctttctgtagtgccttgtaccggtacaacaggacc +attcagcggcactcacttgtaggtgggctrtggttgcatccagaggggctgttgggccttttcccaccgttt +tcccccgggcatgtctgggaatctgcaaacccgttttgcgctgaaagcaccctctataccagaacctggtcc +acgtcaggcttttctagtgatttttcaccgcccgaggcggccgttaatgctcctgcccacgtcgac------ +-ccgccccacggactgaaccctttacggggtgatgt-----------------tcgggccct---------- +---------accgcccccc---------------------------------------------cttgccgc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------------ggcctaccaatccgcccg-- +-ccgatgcacctgag-------------------------------------cctc---------aaccgcc +ggggcagcc--------------------------------------tgcggtccgcaaccgtcgcc----- +-------------------tcctttttgcttacccagatggctccaagatttactcggggtccttgtttgag +tcagactgccactggttaataaatgcgtccaatccaggccaccgcccaggtggtggcctgtgccacgccttc +taccagcgcttcccccagtctt------ttgaccacaccaagttcatcatgcgggatgg---gctggccgca +tacactcttacaccccgcccgatcattcacgcagttgctcctgattatagagttgctcataacccaaaaagg +ctggaggcagcataccgtgagacttgctcccgtctcggcactgctgcctacccgctactgggttcgggcatc +tatcaggtccctgtcggcccgagttttgacgcctgggagcgaaaccaccggcccggcgatgagctttatctt +accgagcccgccgctgct-------------------------------------------------tggtt +tgaggctaataggcccgcccggcttcctgcacccgctactcgggacatggccccggctggttgccccacaac +agagacccgccctccaccgcgggctgtagacggcccggcactacctgccctgaccataacggaggatgcagc +cc------------ggacagccaatcttgcattggaaattg------------actccaggactgagctggg +ccgtgcttgc---gccggctgtgtcgtctgccccggggttgttcactaccaatttactgcgggtgttcccgg +gtccggcaaatccaggtccatacagcagggtgatgttgatgtcgtggttgtgcccacccgcgagctccgtaa +cagctggcgccgccgcgggtttgctgcattcacaccccactcagctgcccgagtcactagtggtcggcgtgt +tgtaatagatgaggcaccctctcttccgcctcatttgttgctgctgcatatgcagcgcgcctcatcggtaca +tcttcttggtgacccgaaccagatccctgcaatcgattttgagcacgctggtcttgttcccgcaattcgccc +cgagctggcccccacaagctggtggcatgtcacgcatcggtgccccgctgacgtctgcgagcttgtacgcgg +ggcgtatcccaagattcagactactagtcgtgtgttgaggtctctgttctggggcgac------cctcccgt +tggccagaagttggtttttacgcaggctgcgaaggcagccaaccctggtgcaatcaccgtccatgaggccca +gggcgccacatttacagaaaccactattattgcgacggctgacgctagagggcttatccagtcgtctcgggc +gcacgccatcgttgcactcactcggcacacagagaaatgtgttattctggatgccccggggttgcttcgcga +ggtgggtatttcggacgtgatagtaaataacttc------------------------------tttttagc +cgggg--gtgagattggccaccaccgcccctccgtcatacctcgtggtaatcccgaccaaaacctcgacac- +-----ccttcaggcttttcctccctcctgccagattagtgcctaccatcagctggccgaggaactcggtcac +cggcctgcgcctgtggctgctgttttaccgccctgccctgagcttgagcagggtttgctgtatatgccgcag +gagctcacagtctctgacagtgtcttggtttttgagctgactgacgtagttcactgccgcatggctgccccc +agccagcggaaggccgtcctctcgacactcgttgggaggtatgggcgccggacgaggttgtacgaagcagcc +cattcagacgtgcgcgagtccctctcgaggtttatccccgccatcggccctgtgcaggctacaacatgtgag +ctctatgagctggttgaggcgatggttgagaaaggccaggacgggtcagccgtgctcgaacttgacctctgt +aaccgagatgtgtcccgaataacatttttccagaaagactgcaataagttcacaactggggagaccattgct +cacggtaaagtgggtcagggaatatcagcatggagcaagactttttgcgctttatttggcccttggtttcgt +gccatcgagaagcagatactagctctgctcccgcccaacattttctacggtgacgcctatgaggactccgtg +ttctccgcagctgtcactggtgcagggtcgagcatg---gtgtttgaaaatgacttttcggagtttgatagt +acccaaaataacttttcact------------------cagtcttgagtgtgtgattatggaggaatgcggt +atgccccagtggctagttagattatatcatctggtgcggtcggcctggattttacaggccccaaaggaatct +ttaaaaggcttttggaagaagcactccggcgagcccggtacgttactttggaacactgtctggaatatggca +gtgatagcccactgctatgagttccgcgacttcaaggttgccgcgttcaaaggagatgactcagtggtcctt +tgtagcgactaccgccagagccgctttgcagcggccttgattgcgggctgtgggcttaagcttaaagttgat +taccgtcctatcgggctttatgccggggttgtggttgcccctggtcttggaacgttgcctgatgtcgttcgg +ttcgccggtcggctgtcggaaaagaactggggtcctggccctgagcgggccgagcagctgcgactggctgtc +tgtgattttctcagaaagttgacgaatgttgcccaggtttgtgttgatgttgtgtctcgtg-------ttta +tggggtcagccctgggctggtgcataaccttattggcatgctgcaaactattgccgatggcaaagctcacta +taccgaaactgtaaagcctgtcttggatcttacgaattctattgtgcagaggttggaatgaataacatgtt- +t----------------tctgcatcgcccatggg------------atcaccatgcgctctagggctgtttt +gctgctgctcctcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccagtcagccggctggcc------------gccgtcgtgggcg-gcgcggcggcggttc +cggcagta-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctattttcat---- +--------------ccaaccaaccccttcgccgctgacgttgacccacatcccggggctggagcccgccccc +ggcagccggcccg---------------cccccttggcacctcttggcgcgacctgtccca----------- +------gcgcccccccgccgccacacgccgtcgacctgcccca---------actggggctgcgccgctgac +cgctgtatcacctgcgcctgatacggcgcctgttcctgatgttgattcacgcggggctatcttgcgccgtca +gtacaatctctctacctcgcctttgacttcaactgttgcttcaggcactaatcttgttttgtacgccgcacc +gcttaaccctcttttgcctctccaggatggcactaatacccatattatggcgactgaggcatctaattatgc +tcagtatcgggttgtccgggctacaatccgttaccgccctctggtaccaaatgctgttggcggctatgcaat +ttctatttccttctggccccagactactactacccccacttctgttgatatgaattcgatcacttcaactga +tgttaggattctagtccagcctggcctggcctctgagctcgtcataccgagtgagcgcctccactaccgtaa +tcaggggtggcgctctgtggagacctccggtgtggctgaggaggaggccacttccgggctcgttatgctttg +tattcatggttcccccgtgaactcatataccaatactccctatacaggggctttagggctgcttgattttgc +gcttgagattgagtttaggaatttgaccccagggaacactaatacgcgtgtgtcccggtataccagcactgc +ccgccatcgtttgcgccgtggcgccgatgggaccgctgagctaacaactacggcggccacgcggtttatgaa +agatcttcatttca---ctgggatgaat---ggggttggcgagattggccgtggcatagccctgaccttgtt +caacttggctgacacacttcttggtggtttgccgacagaattaattgcgtcggctgggggtcaggtattcta +ctcccgtcccgtcgtctcagccaatggcgagccgactgtcaagttgtatacatcagtcgagaatgcacagca +ggacaagggcatcgcgatacctcatgacatcgaccttggtgattcccgcgttgtcattcaggactatgataa +tcaacacgagcaggaccggcctacgccgtcgccggcccccactcgccccttttctgtcctacgcgctaatga +tgtgctgtggctttc-----------------------------cctgaccgctgctgactatgac------ +caaactacatatggctcgtcaactaaccccatgtatgtttcggataccgttacacttgt---taatgtggca +acaggtgctcaggccgtcgctcgttcttttgattggtctaaagtaactttggacgggcgaccgcttaccacc +at-----acagcagcactctaaaacgttttatgtac-tccctctgcgcggtaagctctccttttgggaagct +gggactaccaag--gccggctacccctacaattacaataccactgctagcgatcaaatcctaatcgaaaacg +ctgccgaccac------cgtatagctat-ctctacttatactactagcttggg--------------cgccg +gaccagtatctatttc-cgcggtcggtgtgctcgccccgcactctgtcttagctgttcttgaggatactgtc +gact---------atccagcccgtg----cccatacttttgatgacttctgccctgagtgccgtactc---t +tggcttgcaaggctgtgcctttcaatc--------tactgttgctgagcttcagcgtct------------- +--------taagatgaaggtgggtaaaacccgggagtcttaattaa-tt----tc-cgcc----------gt +gcct-tcct-------tc-tttg-ctgct---tgt-tt--------------------tatt-t-------c +ttatttct----gcg--------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW002523.1/17270/1-7270 |Hepeviridae isolate AUS/VIC/HTL10/2019, partial genome +------------------------ctcttccgatct-cgtaag-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcatcacaaccgccatcgag---caagctgctctggc +tgcggccaattctgccttggcgaatgctgtggtaattcggccgttcttatcccggacacagactgagattct +cattaaccttatgcaaccccgccaattggttttccgtccggaggttttctggaatcaccccatccagcgtgt +catacataacgagctggagcagta---ctgccgcgccc-gtgcggggcgttgtctcgaggtcggggctcacc +caaggtctatcaacgataatccaaatgtcctccaccggtgcttcctccggcctgtcgggagagatgtccagc +gctggtactccgcccctacccgaggccccgctgctaactgccgccgctccgcgctgcgcggcctccctccag +ttgaccgcacttattgctttgatgggttctctagttgtgttttcgcagctgagaccggcatagccctttact +cactacatgatttgtggcctgctgatgttgcagaggcaatggcgcaccacgggatgacacgcttgtatgcag +ttttacacctc-ccccctgaggtcctgttgccgccaggtacttaccatacaacctcttaccttctgatccac +gacggcagtcgtgccgtcgttacttacgagggtgacaccagcgccggttacaaccatgatgtctccattctc +cgtgcctggatccgcacgacgaaaattgtcggcgaccacccgctggtgatagagcgcgtccgcgccattggt +tgccattttgtactgctgcttactgctgcccccgaaccatcacctatgccctatgtcccttttccccgttca +acggaggtttatgtccgctcaatttttggtccgggt---------ggttcgccctccctttttccgtcagcc +t----------gctccacaaagtcta-ccttccacgccgtccctgttcatatttgggacaggctcatgcttt +ttggcgctactctggacgaccaggccttttgctgctcgcggcttatgacctacctccgtggtattagttaca +aggtcactgtcggcacccttgtcgccaatgaggggtggaatgcttctgaggatgctctcaccgcggtgatca +ccgcggcttacctcaccatttgccaccagcgttaccttcgcacccaggcgatttctaaaggtatgcgccggc +tggagcttgagcatgcccaaaagtttgttaccaggctttatagttggctgtttgaaaagtc---------tg +gccgcaattacatccctggtcgccagctccaattctacgcacagtgccggcgctggctttctgccggcttcc +atttggaccctagagtgctcgtctttgatgagtccgtgcactgc---cgctgtaggagttttgtaaagaa-- +----tgtggctaggaaggtttgctgcttcatgaagtggcttggtcagga------gtgtacttgcttcttgg +----------------agcctgcagagggcttgcttggcgaccttgga--------catgataatgaggctt +atgaggggtccgaggtcgaccccgccgagcctgccgccctcgacatatctgggacctacactgttcatgggc +aactgttggcggacctctatagagcactcaatgtaccggatgacatcgctgcccgggccgcccgtttgtcag +ctactgtcgagcttaccgctggccccgggcggcttgagtgtcgtaccactctgggcaataagaccttccgca +ctacaattgttgacggtgcccggctggaggcaaacggccc------------------------cgagcagt +atgtcctctctttcgatgaggctcaccagtgtatgggcgctgggccgcatagccttgcgtacgagctcaccc +ccggtgggctacgggttaaaatttcatct-------aatggcttagactgcacggcagttttcccc---cct +gggcaggccccgagtgcggcggctgcagaggttacagctttctgtagcgccctgtaccggtacaacaggacc +atccagcggcactcacttgtaggtgggctatggttgcacccagaggggctgttgggccttttcccaccgttt +tcccccgggcatgtctgggaatctgcaaacccgttttgcgctgaaagcaccctctataccagaacctggtcc +acgtcaggcttttctagtgatttttcaccgcccgaggcggctgttaacgctcctgcccacgctgac------ +-ccgccccacggactgaacctttttcgggatgatgc-----------------tcgggccct---------- +---------accacccccc---------------------------------------------cttgtcgc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------------ggcctaccaatccgcccg-- +-ccgatgtgcctgag-------------------------------------cctctctctcataagccgcc +ggggcagcc--------------------------------------tgcggtccgcaaccgtcgcc----- +-------------------tcctttttgtttacccagatggcgccaagatttactcggggtccctgtttgag +tcagattgtcactggttaataaatgcgtccaacccaggccaccgcccaggtggtggcctatgccacgccttc +taccagcgcttccctcagtctt------tcgaccacaccaagttcatcatgcgggatgg---gctggccgca +tacacccttacaccccgcccgatcattcatgcagttgctcctgattatagagttgctcataacccaaaaaga +ctggaggcagcgtaccgcgagacttgctctcgtctcggcactgccgcctacccgctactgggttcgggcatc +tatcaggtccctgtcggcctgagctttgacgcttgggagcgaaaccaccgacccggcgatgagctttatctt +accgagctcgccgctgct-------------------------------------------------tggtt +tgaggctaataggcccgcccggcttcctgcacccgctattcaggacacggccccggctgattgccccacagc +agagacccgccccccaccgcaggctgtagacggcccggcgctacccgccctgaccataacggaggatgtagc +cc------------ggacagccaatcttgcattggaaattg------------actccaggaccgagctggg +ccgcgcttgc---gccggttgtgtcgtctcccccggggttgtccactaccaattcactgcgggtgttcctgg +gtccggcaaatccaggtccatacagcagggtgatgttgatgtcgtggttgtgcccacccgcgagctccgtaa +cagctggcgccgccgcgggtttgctgcattcacaccccactcagctgcccgagtcaccagcggccggcgtgt +tgtaatagatgaggcaccctctcttccacctcatttgttgctgctgcatatgcagcgcgcctcctcggtaca +tcttcttggtgacccgaaccagatccctgcaatcgattttgagcacgctggtcttgttcccgcaattcgccc +cgagctggcccccacaagctggtggcatgtcacgcaccggtgccccgctgacgtctgcgagcttgtacgcgg +ggcgtatcccaagattcagactactagtcgtgtgttgaggtctctgttctggggcgac------ccacccgt +tggccagaagttggtttttacgcaggctgcgaaggcagccaaccctggtgcaatcaccgtccatgaggccca +gggcgccacatttacagaaaccactattattgcgacggctgacgctagagggcttatccagtcgtctcgggc +gcatgccatcgttgcactcactcggcacacagagaaatgtgttattctggatgccccggggttgcttcgcga +ggtgggtatttcggacgtgatagtaaataatttc------------------------------tttttagc +cggag--gtgagattggccatcaccgtccctccgtcatacctcgtggtaaccccgaccaaaacctcgacac- +-----ccttcaggcttttcccccttcctgccagattagtgcctaccatcagctggccgaagaactcggtcac +cggcctgcgcctgtggctgctgttttgccgccctgccctgagcttgagcagggtctgctgtatatgccgcag +gagctcacagtctctgacagtctcttagtttttgagctgactgacgtagttcactgccgcatggctgccccc +agccagcggaaggccgtcctctcgacgctcgttgggaggtatggacgccggacgaggttgtacgaagcagcc +cactcagacgtgcgcgagtccctctcgaggtttatccccgccatcggccctgtgcaagctacaacatgtgag +ctctatgagctggttgaggcgatggttgagaaaggtcaggacggatcagccgtgctcgaacttgacctctgt +aatcgtgatgtgtcccgaataacatttttccagaaagactgtaataagttcacaactggggagaccatcgcc +cacggtaaagtgggtcagggaatatcagcatggagcaagactttttgcgctttatttggcccctggtttcgt +gccatcgagaagcagatactagctctgctcccgcccaacatcttctacggtgacgcctatgaggactccgtg +ttctctgcagctgtcactggtgcagggtcgagcatg---gtgtttgaaaatgacttttcggagtttgatagt +acccaaaataacttttcact------------------cagtcttgagtgcgtgatcatggaggaatgcggt +atgccccagtggctagttagattatatcatttggtgcggtcggcctggattttacaggccccaaaggaatct +ttaaaaggcttttggaagaagcactccggcgagcccggtacgctactttggaacactgtctggaatatggca +gtgatagcccactgctatgagttccgcgatttcaaggttgccgcgttcaaaggagacgattcagtggtcctt +tgcagcgactaccgccagagccgctttgcggcggccttgattgcgggctgtgggcttaagcttaaagttgac +taccgtcctatcgggctttatgccggggttgtggttgcccctggtcttggaacgttgcctgatgtcgttcgg +ttcgccggtcggctgtcggaaaagaattggggtcctggccctgagcgggccgaacagctgcgactggctgtc +tgtgattttctcagaaagttgacgaatgttgcccaggtttgtgttgatgttgtgtctcgtg-------ttta +tggggtcagccctgggctggtgcataaccttattggcatgctgcaaactattgccgacggcaaagctcacta +tactgaaactgtaaagcctgttctggatcttacgaattctattgtgcagaggttggaatgaataacatgtt- +t----------------tctgcatcgcccatggg------------atcaccatgcgccctagggctgtttt +gttgctgctcctcgtgtttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccggctggcc------------gccgtcgtgggcg-gcgcggcggcggttc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctattttcat---- +--------------ccaaccaaccccttcgccactgacgctgacccacatcccgggactggagcccgccccc +ggcagccggcccg---------------cccccttggcacctcttggcgcgacttgtccca----------- +------gcgcccccccgctgccacacgccgtcgacctgcccca---------actggggctgcgccgctgac +cgctgtatcacctgcacctgacacggcgcctgttcctgatgttgactcacgcggggctattttgcgccgtca +gtacaatctttctacctcgcctttgacttcaactgtcgcttcgggcactaatcttgttttgtacgctgcacc +gcttaatcctcttttgcctctccaggatggcactaatacccatattatggcgaccgaggcatctaattatgc +tcagtatcgggttgtccgggccacaatccgctaccgccctctggtgccaaatgctgttggcggctatgcaat +ttctatttccttctggccccagactaccaccacccctacttctgttgatatgaattcgatcacttcaactga +tgtcaggattcttgtccagcctggcctggcctctgagctcgtcataccaagtgagcgcctccactaccgtaa +tcaggggtggcgctctgtggagacctccggtgtggccgaggaggaggccacttccgggctcgttatgctttg +tattcatggttcccccgtgaactcttataccaataccccctatacaggggcattaggcctgcttgactttgc +gcttgagattgagtttaggaatttgaccccagggaacactaatacgcgtgtctcccggtataccagtactgc +ccgccatcgtttgcgccgtggcgccgatgggaccgccgagctaacaaccacggcggccacacggtttatgaa +ggatcttcatttta---ctgggatgaat---ggggttggcgagattggccgtggcatagccctgaccttgtt +caatttggctgatacacttcttggtggtttgccgacagaattaattgcgtcggctgggggtcaggtattcta +ctcccgtcccgtcgtctcagccaatggcgagccgactgtcaagttgtatacatcagtcgagaatgcacagca +ggacaagggcatcgcgatacctcatgacatcgatcttggtgattcccgcgttgtcattcaggactatgataa +ccaacacgagcaggaccggcctacgccgtcgccggccccctctcgccccttttctgttctacgcgctaatga +tgtgctgtggctctc-----------------------------cttgaccgctgctgactatgat------ +caaactacatatggctcgtcaactaatcccatgtatgtctctgataccgtcacacttgt---taatgtggca +acaggtgctcaggctgtcgctcgctcttttgattgggctaaagttactttggatgggcgaccgcttaccacc +at-----acagcaccactctaaaacgttttatgtac-tccctttgcgcggtaagctctctttttgggaagct +gggactaccaag--gccggctatccctataactacaataccactgctagtgatcaaattctaatcgaaaatg +ctgccgaccat------cgtatagctat-ctccacctatactaccagtttggg--------------cgccg +gaccagtatctatttc-cgcggtcggtgtgctcgccccgcactctgtcttagctgttcttgaggatactgct +gact---------atccagcccgtg----cccatacttttgatgacttctgccctgagtgtcgtactc---t +tggcctgcaaggctgtgcctttcaatc--------tactgttgctgagctccagcgcct------------- +--------taagatgaaggtaggtaaaacccgggagtcttaattaa-tt----tc-tgct----------gt +gcct-tcct-------tc-tttg-ctgcc---tgc-tt--------------------tatt-t-------c +ttatttct----gcg--------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW596896.1/17229/1-7229 |Hepeviridae isolate C1UY18, complete genome +------------------------------------------g-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaactctgccctggcgaatgctgtggtggttcggccgtttctttctcgtgtgcagaccgagattct +tatcaatttaatgcaaccccggcaattggtctttcgtcctgaagtgctttggaatcatcccattcaacgggt +catacataatgagttagaacagta---ctgccgggccc-gggccggccgttgcctagaggttggggctcatc +caaggtctatcaatgataatcctaatgttttgcaccgatgctttcttcgaccagtcggaagggatgttcagc +gctggtattctgccccaacccggggccctgcggctaactgccgccgctccgctctgcgcggcctcccccccg +tcgaccgcacttattgttttgatggattctcccgctgtacctttgctgcagaaacgggcgtggcactttact +ctctgcacgatctctggccggccgatgttgcagaggctatggcccggcacggaatgacacgcctgtacgctg +cactacatcta-ccccctgaggtattgctaccacctggcacctaccatacaacctcgtatcttttgatccac +gacggtgatcgtgctgttgtgacctacgagggtgacactagtgcggggtataatcatgatgtttccatactt +cgtgcgtggatccgcacgacaaagatagttggtgaacacccgctggtgatagagcgtgtaagggctataggc +tgtcactttgtgctgctgctcaccgcagcccctgaaccatcaccaatgccctacgtcccatacccccgatca +acagaggtgtatgtccgctctatattcggccccggc---------gggtcgccatctctgttcccgtcagct +t----------gctccacaaaatcta-cattccatgccgtaccagttcacatttgggatcggctcatgctct +ttggtgccaccttggatgaccaagcattttgctgctcacggctcatgacctaccttcgcgggatcagttaca +aggttaccgttggcaccctcgtcgctaacgaggggtggaatgcctcagaggatgccctcactgctgttatta +ctgcagcgtatttgaccatctgccaccagcgctatctccgtactcaggcaatatccaagggtatgcgccggt +tggaggtcgaacatgctcagaagtttattactaggctttacagctggctatttgagaagtc---------cg +gccgcgactacatccccggccgtcagctccagttttatgcacagtgtcgccgatggctatcggcaggtttcc +atcttgatcctagggtgcttgtttttgatgagtcggtgccctgc---cgttgtaggacgtttcttaagaa-- +----agttagaggtaagttgtgttgtttcatgaagtggttggggcagga------gtgtacctgttttctgg +----------------agccggctgaaggtttgattggtgaccaaggt--------catgataatgaagcct +acgagggttctgaggtcgaccaggctgagcccgcacatcttgatgtctcggggacctatgctgtccatggac +gccagcttgaggatctatatagggcactcaatattccacatgacattgccgcccgggcgtcccgtttaactg +ccactgttgaactcgttgcgggcccagaccgccttgagtgtcgcactgtgctcgggaataaagtcttccgga +caacgattgaggacggtgcccatctcgaggctaacggccc------------------------tgagcaat +atgttctctcatttgacgcctctcgtcagtgcatgggagcagggtcgcacaatcttacttatgaacttaccc +ctgctggcctgcaggttaagatctcttct-------aacggcctggactgcactgccacgttccct---ccg +ggcggtgctcctagcgccgcacccggggaagttgccgccttttgcagtgctctttataggtacaataggttc +acccaacggcactcgctgacaggtgatctgtggcttcatcctgaggggctgctaggtattttcccccctttc +tcccctgggcacctttgggagtctgccaaccccttctgcggggaaggaaccctgtacacccggacttggtcc +acatctggcttttctagtgatttctccccgcctgaggcggctgttcctgcgccgactaccgccct----tag +gccgcttc---actctacacctccagttagtgatat-----------------ttgggtgct---------- +---------cccgcctcct----tctgaggagc--------------ttcaggttgacgcagtgtctacccc +ccccg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tccctggccccgttcaactccccagc +attgtagagcttaag-------------------------------------aactccgtgcgtaagccgcc +aataccacc--------------------------------------accttctcgtgcccgccgcc----- +-------------------tgctttatacctatccggacggtgctaaggtgtatgcggggtcgctgttcgag +tcagactgtgactggctggttaatgcatccaaccctggccaccgccctggtggcggtctttgtcatgctttt +taccaacgttatcctgaggcat------ttcacccgaccgagttcattatgcgtgatgg---tcttgccgcg +tataccttaactccccgtcctattatccatgcagttgcccctgattatagggttgagcagaacccaaagagg +cttgaggcagcgtaccgagagacctgttcccgccgcggcaccgctgcgtacccacttttaggttcgggaata +tatcaagtccctgttggtcttagttttgatgcttgggagcgtaaccaccgtcccggggatgagctctattta +accgaccccgctgccgcc-------------------------------------------------tggtt +tgaagccaacaagccgacaca--------------------------------------------------- +------------------------------------------gccggctcttactataactgaggatacagc +tc------------gcacggccaacttggcactggagattg------------atgctgccacggaagttgg +ccgcgcctgc---gccggctgtacggtcagccccgggattgtgcactatcagttcactgccggggtcccagg +ctcagggaaatctagatccatactgcagggggatgttgatgtggtggtcgtccccacccgggaactgcgcaa +caactggcgccgccgaggctttgccgcctttacaccccatacggcggcccgtgtgaccctgggtcgccgtgt +tgtgattgatgaggccccatcccttccaccacatttgttactgctacacatgcagcgggcctcgtcagttca +tcttctcggcgacccaaatcagatccccgctatagattttgaacatgctggcctggttcctgcaatacgccc +cgagctcgcacccactagctggtggcatgtcacgcatcgctgccccgcagatgtgtgtgagcttatacgtgg +ggcctatccaaaaattcagaccacgagccgcgtactacggtccctgttctggaatgag------cctgctgt +tggccagaaattggttttcacgcaggcagccaaggccgccaaccctggtgcgattacagttcatgaggccca +gggtgccacctttacggagaccacgattatagctactgctgacgccaggggcctaattcaatcttcccgggc +ccatgctatagttgcactcacccgccatacagagaagtgtgttatcctggatgcccctggcctattgcgtga +ggtcggcatatcagatataattgtcaataacttt------------------------------tttcttgc +cggcg--gggaagcgggtcatcaccgcccttctgtgataccacgcggtaaccctggccagaaccttgagac- +-----actacaggctttcccaccttcctgccagattagcgcgtaccaccagctagctgaggagttgggccac +cgtccagcccctgttgccgctgttctacccccttgccctgagctcgagcagggcttgttatatatgccgcag +gagcttacggtgtctgatagcgtcttggtctttgagcttacggacatagtccattgccgtatggctgcccct +agtcagcgtaaggccgtcctatcgacgcttgtggggcggtatggccgtcggacgaagctgtatgaagcagcc +cactctgatgtccgcgagtccctggccaggtttattcccaccatcgggcctgttcaggctaccacatgtgag +ctatatgagcttgttgaggccatggtggagaaaggccaggatggttctgctgtgctggagctcgatctttgt +aaccgcgatgtctcgcgtatcacattcttccagaaagactgtaacaagtttactactggagagaccattgcc +cacggtaaggtcggtcaaggcatctcggcttggagcaagaccttttgcgccttgtttggcccgtggttccgt +gccattgagaaagagatactggccctgcttccgcctaacatcttctacggcgacgcttacgaggagtctgtg +tttgccgccgctgtatccggggcggggtcatgtatg---gtatttgagaatgatttttcagagtttgatagt +actcagaataatttctccct------------------cggccttgaatgtgtgatcatggaggaatgtggc +atgccccagtggctaatccggctataccacttagtccgatcggcgtggattttgcaggcaccgaaggagtca +cttaaaggcttctggaagaagcactcaggcgaacctggtacccttctttggaacaccgtctggaatatggcg +atcatagcacattgctatgagtttcgcgattttcgggttgccgctttcaaaggtgatgattcagtggttctt +tgcagtgattaccgccagagccgcaatgcagcggctttgattgcaggttgtgggcttaaactgaaggttgat +tatcgccctattgggttgtatgcgggtgtggtggtagcccctggcctcggagtactacctgatgtggtacgt +tttgccggtcggctctccgagaagaattggggccccggcccagagcgggccgagcagctgcgcctcgcagtt +tgtgatttcctccgagggttgacgaatgtcgcgcaggtttgtgttgatgtggtgtcccgag-------ctta +cggagttagccctgggttggtacataaccttattggtatgctgcagactattgccgatggcaaggcccactt +tactgagaccattaaacctgtacttgaccttacaaactcaatcatacatcgggtagaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgttgctcctcatgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgactggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtttcgcaacccggggctggaactcgccctc +gacagccatcccg---------------gcccctcggctccacttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgccgtcgacctgcccca---------gctggggctgcgccgctgac +tgccgtatcaccagcccccgacacagctccagtgcctgatgttgattcgcgcggtgccatattacggcggca +gtataatctgtccacttctccactcacatcatctgttgcctcgggcaccaatctggttctgtatgctgcccc +gttaaacccccttttacctcttcaggatggcaccaacacacatattatggccaccgaggcgtctaattatgc +ccagtaccgggtcgttcgtgccacgatccgttatcgcccgttggtgccaaatgctgttggcggctatgcaat +ttctatctcattttggcctcaaactactactactcctacatccgttgatatgaattccattacctctactga +tgttaggatcctggtccagcccggtatagcttctgaactagttatccctagtgagcgcctccattatcgcaa +ccagggttggcgctctgttgagacttcaggcgtggctgaagaggaggctacctccggtttggtaatgctctg +tattcatggctctcctgttaactcctatactaataccccttacaccggggcactcgggctccttgactttgc +attggaacttgaatttaggaatttaacacccgggaacactaacatccgtgtatcccggtacacgagcacagc +ccgccaccggctgcgccgtggtgctgatggtaccgccgagcttaccactacggcagccacgcgtttcatgaa +ggacctgcatttca---ccggcacgaac---ggggtcggcgaggtgggtcgtggtatcgctctgactttgtt +taatcttgctgatacgcttcttggaggtttgccgacagaattgatttcgtcggccgggggtcaattgttcta +ctcccgtcctgtcgtctcagccaatggcgagccggctgtcaagttatatacatctgtcgagaatgcgcagca +ggacaagggaatcgccatcccacatgacatagacctgggtgaatcccgtgtgaccatccaggattatgataa +ccaacatgagcaggaccggcccactccttcgcccgccccgtctcgccctttctcagtccttcgtgctaacga +tgttctatggctctc-----------------------------cctcactgcagccgagtatgac------ +cagactacgtatggatcctccaccaatccgatgtatgtctcggacactgttacatttgt---taatgtggct +acaggagcccaggctgttgctcgctctcttgactggtctaaggtcaccctggacggtcgccctcttactacc +at-----ccagcagtactctaaaacattctatgttc-tcccacttcgtggaaagttatcgttttgggaggca +ggcacaactaaa--gccggctacccatataattataacacaactgctagtgatcaaattttgattgagaatg +cagcaggccat------cgtgttgctat-ctctacctacaccactagcctcgg--------------tgccg +gccctgtatcagtttc-tgcagttggcgtgctggctccacattctgctctcgctgttcttgaggatactgtt +gact---------atccagcacgtg----ctcatacttttgatgatttctgtccggagtgccgtgccc---t +tggtctacaggggtgtgctttccaatc--------tactgttgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattaa-tt----t--tcct---t------gt +gccc-cct--------tc-atag-tccctt-ttgc-tt--------------------tatt-t-------c +tcttttct----gc----------------tctccgcgctcccct---------------------ggaaaa +aaaaaaa---------------aaaaa--------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355219.1/17323/1-7323 |Hepeviridae isolate HESQL046, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggtccggccgttcttatcccgtattcaaactgatatcct +tattaacctgatgcaacctcgacagcttgtgttccgacctgaggttctgtggaaccatccaatccagcgagt +cattcataatgagctggagcagta---ctgccgagccc-gcgctggccgctgtcttgaggtgggcgctcacc +caaggtccattaatgacaatcccaatgttctgcaccggtgcttcctccgcccggttggaagagatgtccagc +gctggtattctgcccccactcgtggtccagcggctaactgtcgccgttctgcgctacgtggtttgccccctg +tcgatcgcacatattgcttcgacgggttttctcgctgcgcctttgccgctgagaccgggattgctttatatt +cactgcatgacctttggccttcggatgtcgcggaggctatggctcgccacggcatgacgcgcttgtatgctg +ctctccaccta-ccccctgaggttttgttaccacctggcacttaccacacaacctcctatcttttgattcac +gacggcaatcgtgccgtcgtgacttatgagggggatactagtgcgggttataatcatgatgtgtccatactc +cgtgcatggattcgcactactaaaatagttggcgatcacccactggtaatagagagggtccgcgccattggc +tgccattttgtcctactccttactgcagcccctgagccatccccaatgccttatgtcccgtaccctcgttca +acagaggtgtatgttaggtctatatttggccccggc---------gggtcaccttctcttttcccgtcagcc +t----------gctctaccaaatcta-cattccatgccgtcccggtccatatctgggaccggcttatgcttt +ttggtgccaccttagatgatcaggccttttgctgctcgcggcttatgacctatctccgtgggattagctata +aagtgaccgttggcacactcgtcgccaacgagggctggaatgcctcggaggatgcgctgactgctgtgatta +ccgcagcttacctgactatttgtcatcagcgctacctacgaactcaggctatctctaaaggcatgcgtcggt +tagaggttgagcatgcccaaaagtttatcacaaggctatatagctggctgtttgaaaagtc---------ag +gccgtgactacatccccggccgccagcttcagttctacgcacagtgccgccgttggctctcggctggcttcc +atctggaccctagagttctcgtgtttgacgaagcggttccctgc---cgctgccggagcttcctaaagaa-- +----ggtcgccgggaaattttgctgttttatgaaatggttggggcagga------gtgcacctgttttttgg +----------------agccagcggagggcctggttggtgactgtggc--------catgataatgaggctt +atgagggatctgaggtggaccccgccgagcctgctcaccttgacgtttctgggacttatgcggtccacggtc +gccagcttgaggccttatatagagcacttaatatcccagatgacatcgcggctcgtgcattacgtctgacag +ctactgtggaagttgccgccagcccaggcagactcgagtgtcgcacggtgcttgggaacaaaatcttccgta +catcggtaactgatggtgcccatcttgaggccaacggtcc------------------------cgagcagt +acgtcttgacatttgatgattctcgccagatgatgggggccgggcctcacagcctcacgtatgaactagtcc +ccgctggcctgcaggttaaaatatcctct-------aatggcttggattgtactgctgtattccct---cct +ggtggggccccgagtgctgcaccgggtgaagtggcggctttctgtagcgccctctataggtataataggttt +acccagcgccattcgctgaccggtggcctgtggctgcaccccgaggggcttcttggcctgttcccccctttc +tccccggggcatctttgggagtctgcaaatcctttttgcggtgagagcacactttatacacgaacctggtcc +acatctggcttttctagcgacttctccccacctgaggcgacctatgcagccccagcctctaatat----ggg +gtcaccttcgggtgccccctcctccgctagtgacat-----------------ttgggtgtt---------- +---------ctcgccgcct----tctgaggggc--------------cggcggtcgtctcgccacccactac +cccggtcagtaggccaactaa---------------------------------------cccacc------ +------------------------------------------------------------------------ +-tagccttac-------------------------------------------------------------- +-------------tatatct----aggctccccatctgtgaatcgcttacatcaccaccggctctaaccccg +g---------------------------------------------ttaataacccagctaacccgcctagc +cccgctacacctagg-------------------------------------ccccccgcccgcgggccgcc +tacaccacc--------------------------------------accggcccgtacccgccggc----- +-------------------tcctttacacatatccagatggggccaaggtgtatgcaggctctttgtttgag +tcagattgtgactggctggtcaatgcatctaaccctggccaccgccctggtggtggcctctgccatgcattt +taccagcgctttccggagtcgt------tccatccgagtgactttgtcatgcgtgaagg---cctcgccgca +tacactttgagcccgcgtccgatcattcatgctgtggcccccgactacagggttgagcggaaccccaagagg +ctagaggcagcatatcgtgagacctgttctcgcctcggcacagctgcctacccgctactggggtcagggatt +taccaggtccctgtaggcctaagcttcgatgcctgggagcgtaaccatcgcccaggtgatgaactctacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggccaataagccaactca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacaccgc +cc------------gcacagctaaccttgcgcttgagattg------------actccgctactgaggtggg +tcgtgcttgt---gctggctgcaccattaaccccgggattgtccactaccagtttactgccggggttcctgg +ctccgggaagtctaggtctatacagcagggggatgttgatgttgtggttgtgccgactcgtgagcttcgtaa +cagttggcgacgccgcggctttgctgcttttacaccccatacagctgctcgtgtcactaccggccggcgtgt +ggtaatagatgaggcaccttcgctcccaccgcacttgctgttgctccatatgcagcgggcctcatcagtcca +tcttcttggtgaccccaatcagatccctgccattgattttgagcacgccggtttggtcccagcaattcgccc +cgagttggcccctactagctggtggcatgtcacccaccgctgccccgccgatgtgtgtgagctcatacgcgg +ggcctacccaaagattcagacgaccagccgtgtgttgagatctttattttggaatgag------ccagcagt +aggccagaggttggtcttcacgcaggcggccaaggcggctaaccccggtgcaattactgttcatgaggccca +gggcgccacgtttactgagactaccattatagccacggccgatgctagaggcctcatccaatcttcccgtgc +acatgccattgttgcacttactcgtcatacggaaaaatgcgtcattcttgacgctcctggcctactgcgtga +ggtcggcatttctgatataattgttaataacttt------------------------------ttcttggc +tggtg--gcgaggtgggccaccatcgtccctccactatacctcgtggtaacccagaccagaatttagacac- +-----cctccgagcgttccctccgtcctgccaaattagtgcttaccaccagttggctgaggagctaggccat +cggccggccccagtggccgccgtcctgcccccctgccctgagcttgagcaggggttactttacatgccgcag +gagcttacggtgtccgatagtgtcctaatctttgaactcacggacatagtccactgccgtatggccgccccc +agtcaacgtaaggctgtcctttctacgctcgtcggcaggtacggccgccgaacgaaactgtacgaagcggct +cattctgatgttcgcgagtctttaggaaggttcatccccactatcggaccggtccaggccaccacatgcgag +ttatatgagctagttgaggccatggtggagaagggacaggacggctccgctgtgcttgagcttgacctctgc +aaccgtgacgtctcgcgtatcacatttttccagaaggattgtaacaaatttacaacaggtgagaccattgcc +cacggtaaggtaggccagggcatttcggcctggagtaaaaccttctgtgctctattcggcccatggttccgc +gccattgagaaggagattctggctttgctcccacctaatattttctatggcgatgcctatgaggagtcagta +ttttctgcagccgtttccggggccggctccagtatg---gtttttgagaatgatttttctgagtttgatagc +acccaaaacaatttctctct------------------tggccttgagtgtgttattatggaggaatgtggc +atgccccaatggcttatccgactgtatcatctagttagatcagcctggattttgcaagccccgaaagagtct +ttgaaaggtttctggaagaagcattctggcgaacctggtactctcctctggaacacagtctggaatatggcg +atcatagcacattgctacgaattccgtgacttgagagtagcagcgtttaaaggggatgactcggtggttctc +tgcagtgactaccgtcagggccgcaacgcggccgccctaatagctggatgtgggttgaaattgaaggttgat +tatcggcctataggcttgtatgccggcgttgtagtggccccaggcctcggggcacttcctgacgtcgtccgg +ttcgcaggtcgattatctgagaagaactggggcccgagccccgagcgcgccgagcagctgcgtctagcagtt +tgtgatttccttcgagggttgacgaatgtcgcgcaggtttgtgttgatgttgtgtcccgtg-------tgta +tggggtcagccctgggctggtgcataaccttattggcatgctacaaactattgctgacggaaaggcccactt +tactgagactgtcaagcctgtgctggatcttacaaattctatcatacagaggttggaatgaataacatgtt- +c----------------tgtgcattgcccatggg------------atcgtcatgcgccctagggctgtttt +gctgctgttcttcgtgtttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaatcccttcgcctccgacgtcgtatcacaacccggggctggagctcgccctc +gacagccggcccg---------------cccccttggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgacctacccca---------actggggctgcgccgttaac +tgctgtttcaccagcgcctgacacggccccagtccctgatgttgactctcgtggcgctatcttgcgccgtca +gtataatctatccacttcacctttaacttcatctgttgcctctggaactaatcttgttttgtacgctgcccc +gcttaaccctctcctacctcttcaagatggcaccaatactcacatcatggcgactgaggcgtccaactacgc +tcagtaccgggttgtccgggccacaatccgctatcgccctttggtgccgaatgctgtcggtggttatgcaat +ttctatttctttctggccccagactacaactacacccacttctgttgatatgaattccattacttctactga +tgttaggattttagttcagcctggcatagcctctgagctggtcatcccgagtgagcgccttcattatcgtaa +tcaaggctggcgctctgtcgagacatcgggtgtggctgaggaggaggcgacatcaggcctggtcatgctttg +tattcatggctctcctgttaattcctatactaacacaccctataccggggcattggggctcctcgattttgc +actcgagctcgaatttaggaatttgacccctgggaacactaacacccgtgtgtcccgttacactagcacagc +ccggcaccgtttgcgtcgtggtgccgatgggacagctgagcttacaaccactgcagccacacgttttatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggcgaggtgggccgtggtatagccctaacgctgtt +taatcttgctgatacacttctcggtgggttgccgacagaattgatttcgtcggctggaggtcaactgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggataagggtattgccataccacatgatatagatttaggggactcccgtgtggttatacaagattatgacaa +ccaacatgaacaggaccggcctaccccgtcaccggccccatctcgccccttttcagtccttcgcgctaatga +tgtcctgtggctctc-----------------------------tctgactgcggctgaatatgac------ +cagaccacctatggctcgtcgaccaatcctatgtatgtttcagacactgtcacgtttgt---taatgtggca +acgggcgcccaggctgttgcccgatcccttgaatggtctaaggtcactttggatggtcggccgctcactacc +at-----ccagcagtattccaagacattttatgtgc-tgccgcttcgtggcaagctctccttttgggaggct +ggcacaactaag--gctggctatccttacaattacaacactactgctagtgaccagattctgatcgagagtg +cagccggtcat------cgtgttgccat-atctacttatactactagtcttgg--------------cgccg +gccctgtgtctgtttc-tgcggtcggcgttcttgctccacactctgctttagctgtgcttgaagatactatt +gact---------atcccgcccgtg----ctcacacttttgatgatttctgccctgagtgccgtaacc---t +cggcctgcagggctgtgctttccaatc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattta-at----tt-cct--ttt------gt +gccc-cct--------tc-taaa-ct-tt----gc-tc-tgtt----------------att-t-------c +tttcttct----gcg---------------gttcctcgccccccg---------------------gaaaaa +aaaaaa----------------aaaaaaa------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355220.1/17190/1-7190 |Hepeviridae isolate HESQL145, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgctattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtagttcggccgtttttatcccgtgtgcaaactgagattct +tattaatttgatgcaaccccggcaattggttttccgacctgaggtgctctggaatcatcccatccaacgagt +tatccataatgaacttgaacaata---ttgtcgggccc-gggctggtcgttgtctagaggttggggcccacc +caagatccattaatgacaacccaaatgttctgcaccggtgttttctacgaccggtcgggagagatgttcagc +gctggtactctgctcctacccgcggccctgcggctaattgccgccgttctgccttgcgcggcctcccccctg +tagatcgcacctattgttttgatggattctcccgctgctcatttgccgcagaaaccggggttgctctttatt +ctttgcatgacctctggccagccgatgttgcggaggctatggcccgacacggaatgacacgcttgtatgctg +cactacatctc-ccccctgaagtactactaccacccggtacttaccatacaacttcataccttctgattcac +gacggtgaccgtgctgttgtgacctatgaaggtgatactagtgcaggctacaatcatgatgtctccatactt +cgtgcatggatccgcacaactaagatagtcggcgatcatccgctggtgatagagcgtgtgcgggctattggc +tgccattttgtgctgttgctcactgcagctcctgagccgtcaccaatgccttatgtcccatacccccggtcg +acagaggtgtatgtccgctctatattcggccctggt---------gggtccccatccctattcccatcagct +t----------gctctacgaaatcca-catttcatgctgtcccggttcatatctgggaccggctcatgcttt +ttggcgccactctggatgaccaggcgttttgttgttcacggcttatgacctacctccgcgggattagctaca +aggtcactgttggtgcccttgtcgctaacgaggggtggaatgcttcggaggacgctcttaccgctgttatta +ctgcagcgtatttgaccatttgccaccagcgttacctccgtactcaggctatatccaagggcatgcgccgac +tggaggttgagcatgcccaaaaattcatcacaagactttatagttggctgtttgagaagtc---------cg +gccgtgattatatccccggccgccagcttcagttttatgcacagtgccgccgttggttatcggcgggtttcc +atcttgacccaagggtgcttgtctttgatgagtctgtgccctgc---cgttgtaggacatttctcaagaa-- +----ggctgtgggcaagttctgctgttttatgaagtggctgggacagga------atgcacctgttttttgg +----------------aaccagcagagggtctagttggcgaccatggc--------cacgataatgaagcct +atgagggctctgaggttgaccaggccgagcccgcccacctcgatgtttctgggacttatgccgtccatggcc +gccaacttgaggccctgtacagggcacttaacatcccgcatgacattgctgcccgagcctcccgtttgactg +ccaccgtcgaactcgttgcaggtccggatcgcttggagtgccgcactgtgctcgggaataagaccttccgga +cgacggtggttgatggtgcccatcttgaggcgaacggtcc------------------------cgagcagt +acgtcctttcgtttgacgccactcgccagtccatgggggccgggccgcatagtctctcctatgagctcactc +ctgctggtctgcaggtcaagatttcatct-------aatggcctggattgtactgcaacatttccc---ccg +ggcggggcccctagcgctgctccgggggaggtagcagccttttgcagtgccctttataggtataacaggttc +actcagcaccattcgcttataggtggtttgtggctgcatcctgaggggttgttgggtattttcccccccttc +tctcccgggcacctctgggagtctgctaaccctttttgtggggagggaaccttgtatacccggacatggtca +acatctggtttttctagtgacttttccccccctgaggcagccgtcgcagcgccggctgctgcccc----agg +gctacgcc---accctacaccccctgttggtgacat-----------------ttgggtgtt---------- +---------accgccacct----tctgaagaac--------------ttcaggttgacacagcgcccgcccc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcccgctcagtcacccagc +cccgctgggccaaag-------------------------------------gcccctgtgcgtaagccgcc +aacgccacc--------------------------------------atccccgcgcacccgccgcc----- +-------------------ttctttacacctacccggatggggctaaggtgtatgcggggtcactgtttgag +tccgactgtgactggctggttaatgcgtcgaaccccggccatcgtcctggaggtggcctttgccatgccttc +taccaacgctacccagagtctt------tctacccgactgagttcattatgcgcgacgg---tcttgccgcg +tacactttaactccccggcctattattcatgcagtggctcctgactatagggttgagcataacccaaagagg +cttgaggcagcataccgagagacttgctctcgccgcggtaccgccgcctacccactcctcggctcgggcata +taccaagttcccgttagcctcagctttgacgcttgggaacgtaaccaccgccccggggatgagctctaccta +accgacctcgctgctacc-------------------------------------------------tggtt +cgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------gccggccctcacaataactgaggatgcagc +cc------------gtacggccaacctagcactggagatcg------------atgctgctacggaggtcgg +ccgggcctgt---gccggctgcgcagttagccctggggttgtgcactatcagtttactgctggggtcccagg +ttcggggaagtcgcgttctatacagcagggggatgttgacgttgtggttgttcccactcgggagctccggaa +tagctggcgtcgccggggtttcgcagcttttacacctcatacggcggcccgtgtcaccacgggccgtcgtgt +tgtgattgatgaggccccatctcttccaccgcatttgttgctactacatatgcagcgggcctcgtcggtcca +ccttctcggcgacccaaaccagatccctgccatagacttcgagcatgccggcctggtccccgcaatacgccc +tgagcttgcgcccaccagttggtggcatgtcacccatcgctgccccgctgacgtatgcgagcttatacgcgg +ggcttatcccaaaatccaaaccactagccgcgtgatgcggtctttattctggaatgag------cctgccat +tggccagaagttagttttcacccaagctgctaaggctgccaaccccggtgcgattacagtccacgaggccca +gggcgccactttcacggaaactacaatcatagccacggctgatgctagggggctcatccaatcttctcgagc +ccatgccatagtcgcacttacccgccacacagagaagtgcgttattcttgatgcccccggcttgttacgtga +ggtcggtatatcggatgtgattgtcaacaatttt------------------------------ttcctcgc +cggcg--gggaggtgggtcaccatcgcccctctgtgatacctcgcggcaaccctgaccagaacctcgcgac- +-----actacaggcctttccaccttcctgccagattagtgcctatcaccagctggctgaggaacttggccac +cgcccagctcccgtcgccgccgtcttgcccccttgccctgaacttgagcagggcttgttatatatgcctcag +gagcttacggtgtctgatagcgtgctggtctttgaactcacggacatagtccattgccggatggccgccccc +agccagcggaaggccgtcctatcgacactcgtgggtaggtacggccgtcggacaaagctgtatgaagcagct +cactctgacgtccgtgagtccctggctagattcatccccattattgggcccgttcaggctactacgtgtgag +ttatatgagctggttgaggccatggtggagaaaggtcaggatggctctgccgtgcttgagctcgatctctgc +aatcgtgatgtatcgcgtatcacattcttccagaaagattgtaacaaatttaccacaggggagaccattgcc +catggtaaggtcggccagggcatttcggcttggagtaagaccttctgtgccttgtttggtccgtggtttcgt +gctattgaaaaagaaatactagccctgctcccgcctaatatcttctacggcgacgcatatgaggagtctgtg +tttgccgccgctgtgtcaggggcaggttcaagcatg---gtatttgagaatgatttttcagagtttgacagc +actcaaaataacttctccct------------------tggtctcgagtgtgtaatcatggaggaatgtggc +atgccccagtggttaatccggttgtatcatttggttcggtcggcctggatcctacaggcgccgaaggagtct +ctcaagggattttggaagaagcattccggtgagcccggcaccctcctctggaacactgtttggaatatggcg +atcatagcacactgctatgaatttcgtgattttagggttgccgcttttaagggagatgattctgtggtcctc +tgtagcgactaccgtcagagccgcaatgcagcggccctgatcgcaggctgcgggcttaaactgaaggttgat +tatcgccccatcgggttgtacgctggtgtggtggtggcccctggcctggggacgctacccgatgtggtgcgc +tttgccggccggctgtccgagaagaactggggccctgggccggaacgggccgagcagttgcgcctagctgtt +tgtgattttcttcgagggttaacgaatgttgcgcaggtatgtgtcgatgttgtatcccgag-------ttta +cggagttagccctgggctggtacataaccttattggcatgttgcaaaccatagctgatggcaaagctcattt +tacagagactgttaaacctgtgcttgacctcacgaattctattatacagcgggtggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtaccgcaacccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcctggcgcgatcagtccca----------- +------gcgcccctccgctgccccacgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgccgtatcacctgctcccgatacagctcctgtgcctgatgttgactcgcgtggcgccatactgcgacgcca +gtacaatctatccacatccccgctcacatcatctgttgcttcgggtactaatctggttctttatgctgcccc +gctaaaccctttgctaccccttcaggatggcaccaatactcacatcatggccactgaggcatctaattatgc +ccagtatcgggttgtccgagccacgattcgttataggccattggtgccaaatgctgtcggcggctatgcaat +atccatctcattctggcctcagactactacaacccccacgtctgttgatatgaactctattacttccactga +tgttaggatccttgttcagcccggtattgcttctgagttggtcatccctagtgagcgcctccattatcgtaa +ccagggttggcgctctgttgagacctcgggtgtggctgaagaggaggccacttctggcttggtaatgctttg +tattcatggctctcctgttaattcctacaccaacaccccctataccggggcgcttgggctccttgatttcgc +tttagagcttgagtttaggaatctgacacccgggaacaccaacacccgtgtgtcccggtatacaagcacagc +ccgtcatcggctgcgccgcggtgctgacggcaccgccgaacttaccaccacagcggccacgcgcttcatgaa +ggatctgcatttca---ccggtacgaat---ggggtcggtgaggtgggtcgtggcattgctctcacactctt +taatcttgctgacacgcttctcggtggtttgccgacagaattaatttcgtcagctgggggacagttattcta +ctcccgccctgtcgtctcagccaatggcgagccgactgtcaaattgtatacatctgtagagaatgcgcagca +ggataaagggattgccatcccacatgatatagatctgggtgactctcgtgtggtcatccaagactatgacaa +ccagcatgagcaggatcgtcctaccccctcgccagccccttcccgccctttttcggttcttcgcgctaatga +tgttctatggctttc-----------------------------tcttactgccgccgagtatgac------ +cagactacatatgggtcgtccactaacccgatgtatgtctcggacactgttacatttgt---caatgtggct +acaggagcccaggctgttgcccgttccctcgactggtccaaagtcactctggatggccgtccccttactact +at-----ccagcagtactccaaaacattttatgtcc-tcccgcttcgcgggaagttatctttttgggaggcc +gggacgactaag--gccggctacccctataattacaacacaactgctagtgatcagattctgattgaaaatg +cggctggtcat------cgtgttgctat-ttccacgtacaccaccagcttggg--------------cgctg +gccctgtgtctgtttc-tgcagtcggtgttttagcaccacattcggctcttgcagtccttgaagacactatt +gact---------accctgcccgtg----cccacacttttgatgatttttgcccggaatgtcgcgctc---t +tggtttgcaggggtgtgccttccaatc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaagtaggtaaaacccgggagttttaatcaa-tt----t--cctt---t------gt +gccc-cct--------tc-atag-ctttt----gc-tt---t----------------attt-c-------t +tttt-------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355222.1/17237/1-7237 |Hepeviridae isolate HESQL076, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccaccagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggctaactccgccttggcgaatgctgtggtggtccggccgtttttatctcgtgtacaaaccgagatcct +tattaatttgatgcaaccccgacagttggtttttcgtcctgaggtgctttggaatcatcctatccagagggt +catacacaatgaattagaacagta---ctgccgggccc-gggccggtcgttgcctggaggttggagcccacc +cgaggtccattaatgacaatcctaatgttctgcatcgatgcttccttagaccggttggtagggacgttcagc +gttggtactctgcccccacccgcggacctgcggctaactgccgccgctccgcattgcgtggcctcccccctg +tcgaccgtacctactgctttgatggattctctcgctgtgctttcgctgcggagaccggtgtggccctttatt +ctctgcatgatctctggccagccgatgttgcggaagccatggcccgccacgggatgacacgtctctatgctg +cactccatctc-ccccctgaggtgctgctaccacctggtacctatcatacaacttcgtatctcctgattcat +gacggtgaccgcgctgttgtgacctatgagggtgatactagtgcaggctacaatcacgacgtctccatactc +cgtgcgtggattcgtacgactaaaatagttggtgaccatccgctggttatagagcgtgtgcgggccatcggc +tgtcattttgtgctgctgctcaccgcagcccctgagccgtcacctatgccttatgtcccttatcctcgttcg +acagaggtctatgtccggtcaatatttggccctggc---------ggctctccatctttgtttccgtcagcc +t----------gctccacaaaatcca-cttttcatgcagtcccggttcacatttgggaccggctcatgcttt +tcggcgccacgttagatgatcaggcattctgttgttcacgacttatgacatacctccgtggcattagctata +aggtcactgttggtgcgcttgttgccaacgaggggtggaacgcctccgaggacgccctcactgcggtaatta +ccgcagcttacttgaccatctgccatcaacgctacctccgtacccaggcgatatctaaaggtatgcgccggc +tggaggttgagcatgcccagaagtttatcacaaggctttacagttggttatttgagaagtc---------tg +gccgtgattacatccctggccgccagctccagttttatgcccagtgccggcgatggttatctgcaggtttcc +acctagaccccagagtgcttgtttttgacgagtcagtgccctgc---cgctgtagaactttcttgaagaa-- +----agttgccggtaaattttgctgttttatgcggtggctagggcagga------gtgcacctgtttcttag +----------------agccagccgagggcttagttggcgaccaaggc--------catgataacgaggcct +atgaggggtctgaggttgacccagccgaacctgcgtatcttgacgtctcagggacttatgctgtccgtgggt +gccagcttgaggccctttatagggcgctcaacatcccgcaagatattgctgcccgagcggccaggttaacgg +ccaccgttgagctagttgcaagcccagaccgcctggagtgtcgcaccgtgctcgggaataagaccttccgga +cgacggtggttgacggcgcccatcttgaagtgaacggccc------------------------tgagcagt +atgttctatcatttgatgcctctcgtcaggctatgggtgccggatcgcatagcctcacctacgagcttactc +ctgccggcctgcaggtcaggatttcatct-------aatggcttagactgcacggccgtgttcccc---ccc +ggcggtgcccctagtgctgcaccgggggaggtagcggccttctgcagtgccctttacaggtataacagattc +acccagcggcactcgctgaccggcggtttgtggctacaccctgaggggttgctgggcatattcccacctttc +tctcctgggcatatctgggagtccgctaaccctttctgtggggaggggaccctgtacactcgtacttggtct +acatctggcttttctagtgacttttccccccctgaggcggccgcccctgcaccggccattgtctc----gga +gttgcccc---acctcaccccgcctgccagtgatat-----------------ttgggtatt---------- +---------accaccaccc----tctgaggagt--------------cccgggttgatgcggccattgtacc +gtcca------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ccccagagcccgttaggttgcctgac +cgtactgaacccgtc-------------------------------------ccccccgtgcgtaagccacc +aacaccgca--------------------------------------gtctccccgaacccgccgcc----- +-------------------tcctttacacataccctgacggcgctaaggtgtatgcggggtcactgtttgag +tcagattgtgattggctgatcaatgcctctaacccgggtcatcgccctgggggcggcctttgtcatgctttc +tatcaacgctaccctgaggcgt------tttacccgactgaatttattatgcgtgaggg---tctcgcagca +tacaccttgaccccgcgccctattattcatgcagtggcccccgactatagagttgagcagaacccaaagagg +cttgaggcggcgtaccgggaaacttgttcccgtcgtggtactgctgcctatccacttcttggttcaggtata +taccaggttccagttagccttagctttgatgcctgggagcgtaatcaccgccccggcgatgaactctacctg +actgaacctgccgcagcc-------------------------------------------------tggtt +tgaggctaacaagccgacgca--------------------------------------------------- +------------------------------------------gccagtacttacgataacagaggacacagc +cc------------gtacagccaacctagcattagagattg------------acgccgccacagaagttgg +ccgtgcttgc---gctggctgcactgttagccccgggactgtgcactatcagtttaccgccggggtcccggg +ctcgggcaagtctaggtccatacaacaaggggatgttgatgttgtggttgtccccacccgggagctgcgcaa +tagctggcgccgccggggttttgcagctttcacaccccacaccgcggcccgtgttactatgggtcgccgtgt +tgtaattgatgaggctccctctctcccaccgcatctgctgttattacacatgcagcgagcctcttcggtcca +tctccttggtgacccaaaccagatccctgctattgatttcgagcacgccggtttggttcctgcaatccgtcc +cgagctcgcaccaacgagttggtggcatgttacacaccgctgcccggccgatgtgtgtgagcttatacgtgg +ggcctaccccaaaatccagactacgagtcgtgtgttacgatctctgttttggcatgaa------ccagctgt +tggccagaaattggtattcacgcaggccgctaaagccgctaatcccggtgcaattacggtccatgaggccca +gggcgccacctttacagagaccacaattatagctacagctgacgctaggggccttattcagtcatcccgggc +tcacgccattgttgcactcacccgccatacagagaagtgtgtcattttggatgcccccggtctgctgcgtga +ggtcggcatatcggatgtgatagttaataacttc------------------------------ttcctcgc +tggtg--gagaggtgggccatcaccgcccttctgtgatacctcgcggtaaccctgaccgaaatcttgagac- +-----ccttcatgccttcccgccgtcttgtcagattagtgcctaccaccagttggctgaagagctgggacat +cgcccggcccctgttgccgctgttttgcctccctgccccgagcttgaacagggtctgttatatatgccacaa +gagcttacagtgtcagatagtgtgatggttttcgaactcacggatatagtccactgccgcatggctgccccg +agccagcggaaggccgttctctcgacactcgtggggaggtacggtcgtaagacgaaattgtacgaggcagct +cattcagatgtccgtgagtccttagctaggtttattccaactatcggacctgtccaggttactacgtgtgag +ttgtatgaactagttgaggctatggtagagaagggtcaggacggttctgccgttctggagcttgatctttgt +aatcgtgatgtttcgcgtattacattcttccagaaagactgcaataagttcacaactggtgagaccatcgcc +catggcaaggtgggccagggcatttcggcttggagtaagaccttttgtgccctgttcggtccgtggttccgt +gccattgaaaaagaaatactggccctgctcccgcccaacatcttttatggtgacgcttacgaggagtcggtg +tttgctgccgctgtgtctggggcagggtcttgcatg---gtgtttgaaaacgatttctcggaatttgacagt +actcagaataatttctctct------------------tggccttgagtgcgtggttatggaagagtgtggt +atgcctcaatggttaattagattgtatcacctggttcggtcagcctggattttgcaggcgccaaaggagtcc +cttaaaggtttttggaagaagcactctggtgagcctggcaccctcctctggaataccgtttggaacatggcg +atcatagcacattgctatgagttccgcgatcttcgagttgccgcttttaagggtgacgactcagtggttctc +tgccacgactaccgacagagtcgtaatgcggcggccttgattgcaggctgtgggctcaaattgaaggttgat +tatcgccctattgggctgtatgctggtgtagtagtggcccctggtctcgggacactgcctgatgtagtgcgt +tttgctggtcggctgtctgaaaagaactggggccctggcccggagcgagccgagcagctacgtcttgctgtc +tgtgattttcttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtatcccgtg-------ttta +tggagtcagccccgggctggtacataaccttattggcatgctgcagaccattgctgatggtaaggctcactt +tacagagaccattaaacctgtgcttgatcttacgaattctatcatacagcgggtggaatgaataacatgtc- +t----------------tgtgcatcgcccatggg------------ttcaccatgcgccctaggggtgttct +gttgctgttcttcgtgtttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgccgacgtcgtttcacaatccggggctggagctcgccctc +gacagccgccccg---------------cccccttggctccgcttggcgcgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------gctggggctgcgccgttgac +tgccgtgtcacccgctcctgacacagctcccgtacccgatgttgactcacgtggtgccatcctgcgccggca +gtacaatctgtccacgtccccgcttacgtcatctgtcgcctcgggtactaatctggttctctatgctgcccc +attgaatcctcttttacctctccaggacggcaccaatacccatattatggctactgaggcatctaattatgc +ccaatatcgggtggtccgagctacaattcgttatcgcccgttggtgccgaacgctgtcggcggctatgctat +ctctatctctttctggcctcaaacaaccactacacccacctctgttgatatgaattctattacctccactga +tgttaggattctagtccagcctggtattgcctctgagttggtcattcccagtgagcgcctccactatcgcaa +ccaaggctggcgctctgttgagaccacgggtgtggctgaggaggaggctacttctggcctggtgatgctttg +tattcatggctccccagtcaactcctataccaatacaccttatactggggcattagggcttcttgattttgc +attagagcttgaatttaggaatttgacacctgggaacactaacacccgtgtatcccgatacactagtacagc +tcgccaccggttgcgtcgtggtgctgatgggaccgctgagcttaccaccacggcggccacgcgtttcatgaa +agacctgcatttta---ctggtacgaat---ggagtcggtgaggtgggccgaggtattgctcttacactatt +caatcttgctgacacacttctcggtggtttgccgacagaattgatttcgtcggctgggggtcaattatttta +ctcccgccctgtcgtctcagccaatggcgagccgactgtaaagttatacacatctgttgagaatgcacagca +agacaagggtattaccatcccacatgatatagacctcggtgactcccgtgtggttattcaggactatgacaa +ccagcacgaacaggatcgacctaccccctcacctgctccctcccgtccattctcagttcttcgtgccaatga +tgtcttgtggctttc-----------------------------ccttactgctgctgagtacgac------ +cagaccacgtatgggtcgtccaccaaccccatgtatgtttcggatacagtcacatttgt---gaacgtggcc +actggtgctcaggctgtagctcgctcccttgattggtctaaagttactctagacggtcgtcctctcaccacc +at-----ccaacagtactctaagacgttttatgtcc-ttccgctccgtggtaagctgtctttctgggaggcc +ggcactacaaag--gccggttatccctataactataacacaactgccagcgatcaaatcctaattgaaaatg +ctgctggccac------cgtgttgctat-ttctacttacactactagcttggg--------------tgccg +cgcccacctcaatttc-agcagtcggtgtattggccccgcatacggctcttgctgttcttgaggatactatt +gact---------accccgctcgcg----cccacacttttgatgatttctgtccagaatgtcgcaccc---t +tggcttgcagggttgcgctttccagtc--------tactattgctgagcttcagcgcct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattaa-tt----c--cctt-tct------gt +gccc-cct--------tc-atag-tactcttttga-ta--------------------tatt-t-------c +tttgttcg----gt----------------tcctcgc---ccccg---------------------gaaaaa +aacagga---------------gacaaaaatg---------------------------------------- +------------------------------------------c----------------------------- +------------------------------------------------------------------------ +----------- +>MW355223.1/17239/1-7239 |Hepeviridae isolate HESQL047, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccctggcgaatgctgtggtggttcggccgtttttatcccgtgtccaaactgatatcct +tattcacttgatgcaacctcggcagcttgtgttccgacctgaagtcctttggaaccacccgatccagcgagt +tatacataatgagctggagcaata---ctgccgagccc-gtgctggccgctgtcttgaggtaggcgctcacc +caagatctattaatgataaccctaatgttctgcaccggtgcttcctccgcccggtcggaagagacgtccagc +gctggtactctgcccccactcgtggcccagcggctaactgccgccgctctgcgctacgcggcttgccccctg +ccgatcgcacttactgtttcgacgggttttcacgctgcgcttttgccgcagagaccgggattgctctatact +cactgcatgatctttggccctcggacgttgcggaggctatgttccgccacgggatgacgcgtttgtacgctg +cccttcattta-ccccctgaggtcctattaccacctgggacttaccacacaacctcctatcttctgattcac +gacggcaatcgcgccgtcgtaacttatgagggggatacgagtgcgggctataaccatgatgtgtctatactt +cgtgcatggattcgcaccactaaaatagttggtgaccatccactggtaatagaaagggtccgcgccatcggc +tgccattttgttttactccttaccgcagcccctgagccatccccaatgccttatgttccgtaccctcgttca +acagaggtgtatgttagatccatattcggccctggt---------gggtcgccttctctttttccatcagcc +t----------gctctactaaatcta-cgttccatgccgtcccggttcatatctgggaccggcttatgcttt +ttggcgccactctagatgatcaggccttctgctgctcgcggcttatgacttatctccgcgggattagttata +aagtgaccgttggcgcacttgtcgccaacgagggctggaacgcctcggaggatgcgcttaccgccgtgatca +ccgcagcgtacttgaccatctgccatcagcgctacctacgaacacaggccatctctaaaggtatgcgccggc +tagaggtagagcacgcccagaaatttatcacaaggttatacagctggctgtttgaaaagtc---------ag +gccgtgattatatccccggtcgccagctcgagttctatgcacagtgtcgccgttggctctcagctggatttc +atctagaccctagagttcttgtctttgacgaggcggtcccctgc---cgctgccggagcttcctaaagaa-- +----agctgccgggagattttgctgctttatgaaatggttggggcagga------gtgtacctgttttttgg +----------------agccagcggaaggcctggttggtgactgtggt--------catgataatgaggctt +atgaggggtccgaggtggaccccgccgagcctgcccaccctgatgtttctgggacctatgcagtccatggcc +gacagcttgaggctctatatagagcgcttaatatccctgatgatattgcggcccgtgcgtcgcgcctggcag +ctactgtggaacttgttgccagcccaggccgactcgagtgccggacggtacttgggaataagacctttcgta +catcaataattgatggtgcccacctcgaagccaacggacc------------------------cgagcagt +acgtcttgacatttgatgattcccgccaggcaatgggggccgggcctcatagcctcacgtacgaacttgtcc +ctgccggtttgcaggttaaaatatcctct-------aatggcttggactgtaccgctatattcccc---cct +ggtgcggcgccaagtgctgcaccaagtgaggtggcggctttttgcagcgccctatataggtacaataagttt +acccagcgccattcgctgaccggtgggctgtggctgcaccctgaggggcttcttggcttgttcccccctttc +tctccggggcacctttgggagtctgcaaaccccttctgcggtgagagcacactttatacacgaacttggtcc +acatctggtttttctagcgacttttccccgcccgaggcggcttacaccgtcccagtccccgacgt----cgg +gttaccctcgggtgccccctcgtctgctagtgatgt-----------------ttgggtgtt---------- +---------cccaccgccc----tctgaggggt--------------cggcgatcgttccaccacccgaaac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtaagccagctaatccgccttgc +tctattacatttaga-------------------------------------ccccccgtctgtaagccacc +cacaccacc--------------------------------------accggctcgtacccgtcggc----- +-------------------tcctttatatttatcccgatggggccaaggtgtatgcaggctctctgtttgag +tcggattgtgactggctggtcaatgcatctaaccccggccaccgtcctggcggtggtctctgtcatgcattt +tatcagcgtttcccggagtcat------tctatccgactgattttatcatgcgtgaggg---tcttgccgcg +tacactttgagcccgcgtccaatcatccatgctgtggcccccgactatagggttgagcagaaccctaagagg +ctggaggcggcatatcgtgagacctgttcccgcctcggcacagctgcctacccgctactggggtcggggatt +taccaggtgcctgtaggcttaagtttcgacgcctgggagcgcaaccaccgccctggcgatgaactatacctc +actgagccggctgccgcc-------------------------------------------------tggtt +tgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccttaacaatcactgaagacactgc +cc------------gtacagccaaccttgcgcttgagatgg------------actcagctaccgaggtcgg +tcgtgcttgc---gccggctgcactattagccctgggattgttcattatcagtttaccgccggggttcctgg +ctccgggaagtctaggtccatacagcagggggatgttgatgttgtagttgtgccaactcgtgagcttcgtaa +cagttggcgacgccgcggctttgctgcttttacaccccacacagcagctcgtgtcaccgccggtcggcgtgt +ggtgatagatgaggcaccctcgcttccaccgcatttgctgttgctccatatgcagcgggcctcatcggttca +cctccttggtgatcccaatcagatccctgctattgactttgagcatgccggcttagtcccagcaattcgccc +tgagcttgcccctactagttggtggcacgttacccatcgttgccccgctgatgtgtgtgaactcatacgcgg +agcctacccaaagattcagacgaccagccgtgtgttgcggtctttattctggaatgag------cctgcggt +gggccagaggctggttttcacgcaggcagccaaggcggccaaccccggtgcaattaccgtacacgaagccca +gggcgccacgttcacggagactactatcatagccacggccgatgctagaggtcttattcagtcttcccgtgc +acatgccatcgttgcacttacccgccatacagaaaaatgcgtcattcttgacgcccccggcctattgcgtga +ggtcggcatttctgatataattgttaataacttt------------------------------ttcctggc +tggtg--gtgaagtgggtcatcaccgcccttctatcataccccgcggcaatccggaccagaacttagacac- +-----tctgcaagccttccccccgtcctgccaaattagtgcctaccatcagctggctgaggagctgggccat +cggccggccccagtggccgccgtcctgcccccctgccctgagcttgagcaggggctactctacatgccgcag +gagcttacggtgtccgatagcgttctgactttcgaacttacggacatagtccactgccgcatggctgccccc +agtcaacgtaaggcggtcctttcgacgctcgttggtaggtacggccgccgaacgaagttgtacgaagcggcc +cactctgatgttcgcgagtctttagggcggttcatccccactatcggaccggtccaggccaccacgtgcgag +ctatatgagctggttgaggctatggtggagaagggccaggacggctctgccgtgcttgagcttgacctctgc +aaccgtgatgtctcgcgtattacattcttccagaaggattgtaataaatttacaacaggtgagaccattgcc +cacggcaaagtgggccagggcatttcggcttggagtaagaccttttgtgctttatttggcccgtggttccgt +gccattgagaaggaggttctagctttgcttccacccaacattttctatggcgatgcctatgaggagacagtg +ttttctgcagctatctctggggcaggctccagtatg---gtctttgagaacgatttttctgagtttgatagc +acccaaaataatttttctct------------------cggccttgagtgtgttattatggaggagtgtggc +atgcctcagtggctaattcgactgtaccatctggttaggtcagcctggaccttgcaagccccgaaagagtcc +ttgaaaggtttttggaagaagcattctggcgagcccggtactctcctttggaacactgtctggaacatggcg +atcatagcacactgctacgaatttcgtgatctgagaatggcagcgttcaaaggggatgattcagtggttctt +tgcagtgattatcgccaaagccgcaatgcggccactctgatagctggttgcgggttgaaattgaaggttgat +tatcggcctataggtctgtatgccggcgttgtagtggctccgggcctcggggcacttcctgatgttgtccgg +tttgcaggtcgattatctgagaagaactggggcccgggtcctgagcgcgccgaacagttgcgcctagcggtt +tgtgattttcttcgaaggctgacgaatgtcgcgcaggtttgtgttgatgttgtgtcccgcg-------tcta +tggggttagccccgggctggtgcataaccttattggcatgttacagactattgctgatggaaaggctcactt +taccgagaccgtcaagcctgtgttggatcttacaaattctattatacagaggttggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgccatgtgccctagggctgttct +gttgctgctcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaatccggggctggagctcgccctc +gacagccggcccg---------------ccctctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------gccggggctgcgccgctaac +tgctgtttcaccggcgcctgatacggctccagtccctgatgttgactctcgtggtgctattttgcgccgcca +gtacaatctgtccacctcccctttaacttcatctgttgcttctggaactaatcttgtcttgtatgctgcccc +gcttaacccccttctacccctccaagacggcactaatactcacatcatggcgactgaagcgtctaattatgc +tcagtaccgggttgttcgcgccacaatccgctatcgccctttggtgccgaatgccgtcggtggttatgcaat +ctctatttctttttggcctcagactacaactacacccacttctgttgatatgaactctatcacttctactga +tgttaggattctagtccagcctggcatagcctctgagctagtcatcccgagtgagcgccttcattatcgtaa +tcaaggctggcgctctgttgagacatcgggtgtggccgaggaggaggcaacatcaggcttggttatgctttg +tattcatggttcccctgtcaattcctataccaatacgccctatactggggcactggggctcctcgattttgc +actcgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgctatactagcacagc +ccgacaccgtctgcgccgtggtgccgatggtacagccgagctcacaaccactgctgccacacgttttatgaa +ggacttgcatttta---ccgggacaaat---ggtgtcggcgaggtaggtcgtggtatagccctaactttatt +caatcttgctgatacacttctcggcgggctgccgacagaattgatttcgtcggctggaggtcaattgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagctatacacctctgtcgagaatgcacagca +ggacaagggcatcgctataccacacgatatagacttaggggactcccgtgtggttatacaagactatgacaa +ccaacatgagcaagaccggcctaccccgtcaccggccccgtcccgccctttttcagtccttcgagctaatga +tgttctgtggctttc-----------------------------tttgaccgcggctgaatacgac------ +caaaccacttacggttcgtcgaccaaccctatgtatgtttcagatacagtcacatttgt---taatgtggca +acaggtgcccaggctgtcgcccgttcccttgattggtccaaggtcactctggacggccgtccactcaccacc +at-----ccagcagtactccaagacattctatgtgc-tgccgcttcgtggcaagctttccttttgggaagct +ggtacaactaag--gctggttacccttataattataataccactgctagtgaccarattttaattgagaatg +ctgccggtcac------cgtgttgccat-atctacttataccactagtcttgg--------------tgccg +gccctgtgtctgtttc-tgcgaagaacgttcttgctccgcactctgctttggctgtgctcgaggacactatt +gatt---------accctgcccgtg----ctcacacttttgatgatttttgccctgagtgccgtaatc---t +cggcctgcagggctgcgctttccagtc--------tactgtcgctgagcttccgcgtct------------- +--------taaaatgaaggtaggtaagacccgggagttttaattaa-ttt---tc-ctt--tt-------gt +gccc-cct--------tc-taca-ct-ct----gc-tc-tgt----------------tatt-t-------c +tttttttct--ggcg----------------tctcccgccccccc---------------------cgaaaa +aaaaaaa---------------aaaaaaa------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355225.1/17192/1-7192 |Hepeviridae isolate HESQL170, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggttcggccgttcttatctcgtgtacaaaccgagattct +tattaatttgatgcaaccccggcagttggtcttccgccctgaggtgctttggaatcatcctatccagcgggt +catacataatgaattagaacagta---ctgccgggctc-gagctggccgctgcttggaggtcggagctcacc +cgagatccattaatgacaaccctaatgttctgcaccggtgctttctcagacctgttggccgagacgtccagc +gttggtactctgctcccacccgtggccctgcggccaactgtcgccgctctgcattgcgtggccttcctcccg +ttgatcgtacttattgctttgatgggttttcccgttgtgcttttgctgcagagaccggtgtggccctctact +ctctgcatgatctttggccggctgatgttgcggaggctatggcccgccatgggatgacacgcctatatgctg +cactgcacctc-ccccctgaggtgctactaccacccggcacctaccacacaacctcgtatctcttgattcac +gacggcgaccgcgctgttgtgacttacgagggcgataccagtgcaggctataatcatgatgtctctatactc +cgtgcgtggattcgcactaccaaaatagttggtgaccatccgttggttatagagcgcgtgcgagccattgga +tgtcattttgtgttgctgcttaccgcagcccctgagccgtcgcctatgccttatgtcccctacccccgttca +acggaggtgtatgtccggtccatatttggccctggc---------ggctccccgtctttgttcccgtcagcc +t----------gctccactaaatcta-ctttccatgccgtcccggttcatatctgggatcggctcatgcttt +ttggcgccaccctggacgatcaggcgttctgttgttcgcggctcatgacctacctccgtggtatcagttaca +aggtcacagttggtgcacttgtcgctaatgaggggtggaacgcctctgaggatgcccttactgctgtgatca +ctgcggcctacttaactatttgccaccagcgctatctccgtacccaggcgatatctaagggtatgcgccggt +tggaagttgagcacgcccagaaattcatcacaagactttatagctggctatttgagaagtc---------tg +gccgtgactatatccccggccgccagctccagttctacgcacagtgccgacggtggctatctgcgggcttcc +acctagaccccagggtacttgtttttgacgaatcagtgccctgt---cgttgcaggacatttttgaagaa-- +----agttgccggtaaattctgctgttttatgcggtggttagggcaaga------gtgtacctgcttcttgg +----------------agccagccgagggtttaattggcgaccaaggc--------catgataacgaggcct +atgagggctctgaggtcgacccggccgaacctgcacatcttgatgtctcagggacctatgccgtccatgggc +accagcttgaggccctctatagggcacttaatgtcccacacgacattgccgcccgagcgtctcggttaacgg +ccactgttgagcttgtcgcaagtccagaccgcttagagtgccgcaccgtgctcggaaataagaccttccgga +cgacggtagtcgatggtgcccaccttgaagcgaatggccc------------------------tgagcagt +atgttttatcatttgatgcctcccgtcagtccatgggggccgggtcgcacagtctcacttatgagctcaccc +ctgccggcttgcaggtcaggatttcatcc-------aatggtctggattgtactgctacattcccc---cct +ggcggggcgcctagcgccgcgccgggggaggtggcagccttttgtagcgccctttatagatacaacaggttc +acccagcggcactcgctgaccggcggattatggttacatcctgaggggctgctgggcgtctttccccctttc +tcccctgggcacatttgggagtctgccaaccccttctgcggggaagggaccttgtacacccggacctggtca +acatctggtttttctagtgatttctccccccctgaggcggctgtccctgctgcgactgctgcccc----agg +gttgcccc---atccgaccccacctgttagtgacat-----------------ttgggtatt---------- +---------accaccacct----ccggaggagt--------------cttgggccaatgcggtgtctgtgtc +tcctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tctctgagcctgctgggctgcctagc +cctactgttcctataccc----------ccacccccccccccccccccctccccccccgtgcgtaagccatt +aacaccccc--------------------------------------gcccccccgcactcgtcgtc----- +-------------------ttctttacacctactctgacggtgctaaggtgtatgcggggtcactatttgaa +tcagactgtgactggttggttaatgcctctaatccgggtcaccgccccgggggtggtctctgtcatgccttc +taccaacgatttccagaggcgt------tttactcgactgaatttattatgcgtgaggg---ccttgcagca +tacaccttgaccccgcgccctatcattcatgcagtggctcccgactatagggttgagcagaacccgaagagg +cttgaggcagcgtaccgggagacttgttcccgtcgtggcaccgctgcctacccgcttttaggctcaggcata +taccgggtccctgttagcctcagttttgatgcctgggaacgtaatcaccgccccggcgatgagctttacttg +actgagcccgccgcagct-------------------------------------------------tggtt +tgaggctaataagccatcgca--------------------------------------------------- +------------------------------------------gccggcgctcactataactgaggacacggc +tc------------gtacggccaacctggcattagagattg------------atgccgccacagaggttgg +ccgtgcttgt---gccggctgcacaattagccctggggttgtgcactatcagttcaccgccggggtcccggg +ttcaggcaagtcaaggtccatacaacaaggggatgttgatgtggtggttgtgcccacccgggagctccgtaa +tagttggcgccgccggggttttgcagcctttacacctcatacagcagcccgtgtcactatcggtcgccgcgt +tgttattgatgaggccccatcccttccaccgcacctgttgctattacacatgcagcgggcctcttcggtcca +tctcctcggcgaccctaatcagatccctgctatcgattttgaacatgctggcctggtccccgcgatccgccc +cgagcttgcaccgacaagctggtggcatgtcacacaccgctgcccggccgatgtgtgcgagctcatacgcgg +ggcctatcctaaaatccagactacgagccgtgtgctacggtccttgttttggaatgaa------ccggctat +cggccagaagttggtttttacgcaggctgccaaggctgctaaccctggtgcgattacggtccacgaagccca +gggcgccaccttcacagagactacaattatagccacggccgacgccaggggccttatccaatcatccagggc +tcatgccatagttgcactcactcgccacactgagaagtgtgtcattctggatgcccccggcctgctgcgtga +ggtcggcatttcggatgtgattgttaataacttc------------------------------tttcttgc +tggcg--gggaggttggtcatcaccgcccttctgtgataccccgtggtaatccagatcagaacctcggaac- +-----cctacaagccttcccaccgtcctgccagattagtgcttatcatcagttggctgaggaactgggccac +cgcccggtccctgttgccgccgtcttgcccccctgcccagagctcgagcagggtctgctctacatgccacaa +gagcttactgtgtctgacagtgtattggtctttgagctcacggacatagttcattgccgcatggccgcccca +agccagcgaaaggctgttctctcgacacttgtggggaggtatggccgtaggacgaaattatatgaggcagcc +cattcagatgttcgtgagtccctagccaggttcatccccactattgggcctgttcaggccaccacatgtgag +ttgtatgagctggttgaggccatggttgagaaaggtcaggacggctctgccgtcctagagctcgatctctgt +aatcgtgatgtttcgcgcatcacgttcttccaaaaggactgtaacaagtttacaactggtgagactattgcc +catggcaaggttggccagggtatatcggcctggagtaagaccttctgtgctttgtttggcccgtggttccgt +gccatcgaaaaggaaatattggccctacttccgcctaatatcttttatggcgatgcctatgaggagtcagtg +tttgctgccgctgtgtccgcggcggggtcatgtatg---gtatttgaaaatgacttttcagagtttgacagc +acccagaataatttctcact------------------tggccttgagtgtgtggttatggaggaatgcggc +atgccccaatggttaattaggttatatcatttggttcggtccgcctggattttgcaggcgccgaaggagtct +cttaagggtttctggaagaagcactctggcgagcctggcacccttctttggaacaccgtctggaacatggcg +attatagcacattgctatgagttccgcgacttacgtgtcgccgcctttaagggtgatgattcagtggtcctc +tgtagcgactatcgtcagagccgcaatgcggccgccttgattgcaggctgtgggctcaagttgaaggttgac +taccgccctattgggctgtatgctggggtggtggtggcccctggcttggggacactgcctgatgtggtgcgt +tttgctggtcggttgtctgagaagaactggggccccggcccggaacgtgctgagcagctacgtctcgctgtt +tgtgatttccttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggtcagccctgggctggtacataaccttattggcatgctgcagaccattgccgacggcaaggcccactt +tacagagaccattaaacctgtgcttgaccttacaaactccatcatacagcgggtggaatgaataacatgtt- +t----------------ttcgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgttgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gtcgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgccgatgtcgttcctcaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctccgcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgctatatcaccagcccctgatacagctcctgtacctgatgtcgattcacgcggtgctatcttgcgccggca +gtataatttgtctacgtctccgcttacgtcatctgtcgcttcgggtactaatttggttctctatgctgctcc +gctgaaccccctcttgcctttgcaagatggcaccaacactcatattatggccactgaggcatctaattatgc +ccagtatcgggttgttcgagccacgatccggtatcgcccgctggtgccaaacgctgttggtggttatgctat +atctatttctttctggcctcaaactacaactacccctacttctgttgatatgaattccattacttccactga +tgttaggattttggttcagcccggtatcgcctccgagttagtcatccccagtgagcgccttcactaccgcaa +tcaaggttggcgctctgttgagaccacgggtgtggctgaggaggaggctacttccggtctggtaatgctttg +cattcatggctctcctgttaattcttatactaacacaccttatactggcgcactggggcttcttgattttgc +actagagcttgaatttagaaatttaacacccgggaacaccaacacccgtgtttcccggtataccagtacagc +ccgtcaccggctgcgccgcggtgctgatggcactgctgagcttaccacaacagcggctacacgtttcatgaa +ggatttgcatttta---ctggcactaat---ggcgttggtgaggtgggccgtggcatcgctctgacactgtt +caatcttgctgatacgcttctcggtggtttaccgacagaattgatttcgtcggccgggggtcaattgtttta +ctcccgccctgttgtctcggccaatggcgagccgacagtaaagttatatacatctgttgagaatgcgcagca +ggataagggcattaccatcccacacgatatagacctgggtgattcccgtgtggttattcaggattatgataa +ccagcacgagcaagaccggcccactccgtcacctgctccttcccgccctttctcagttcttcgtgccaatga +tgtcttatggctctc-----------------------------tctcactgccgcagagtatgac------ +cagaccacgtatgggtcgtccaccaaccctatgtatgtttctgatacagtcacatttgt---taatgttgcc +accggtgcccaggctgtcgcccgctcccttgattggtctaaagttactctggatggtcgcccccttactacc +at-----tcagcagtattctaagacattttatgtcc-tcccgctccgcgggaagttatccttctgggaagct +ggcacgactaag--gccggctacccgtataattataacaccactgctagtgatcaaattctgattgagaacg +cggccggccac------cgtgtcgctat-ttccacctataccactagcttggg--------------tgccg +gccctacctcgatttc-tgcggtcggtgtattagctccgcactcggcccttgctgttcttgaagatactgtt +gatt---------accccgcccgtg----ctcatacatttgatgatttctgcccggagtgccgcaccc---t +aggtttgcagggttgtgcattccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagtcctaattaa-tt----c--t--t-tct------gt +gccc-cct--------t------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355226.1/17230/1-7230 |Hepeviridae isolate HESQL207, complete genome +--------------------------------------------------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcatcactactgccatcgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagctggttttccgacctgaggtgctctggaatcatcctatccaacgggt +tatccataatgaattagaacagta---ttgccgggccc-gggctggtcgctgtttagaggttggggctcacc +caagatccatcaatgacaatccgaatgttctgcaccgctgctttctacgaccagtcggtagagatgttcagc +gttggtactctgcccctacccgtggccctgcggctaattgccgccgttccgctttgcgtggcctcccccccg +tcgatcgcacctactgttttgatgggttctctcgctgctcatttgctgcagagactgggattgccctctatt +cattgcatgacctctggccggccgatgttgcagaggccatggcccgtcacgggatgacacgcctatatgctg +cactacacctc-ccccctgaagtactactaccacctggtacctaccacacaacttcatatcttcttattcac +gacggcgatcgcgccgttgtgacttatgagggtgacactagtgcgggctataatcatgatgtttccatactc +cgtgcatggatccgcacaactaagattgttggcgatcatccgctggttatagagcgtgtgcgggctatcggc +tgccactttgtgctactgcttactgcggcccctgagccatcaccaatgccttatgtcccgtacccccggtcg +acagaggtgtatgttcgctccatattcggccctggt---------gggtccccgtccttgttcccgtcagct +t----------gctccacaaaatcca-catttcatgccgtcccagttcatatttgggaccggctcatgctct +ttggtgccaccttggacgatcaggcgttttgctgctcacggcttatgacttatcttcgtgggattagctaca +aggttactgtgggcgccctcgttgctaacgaggggtggaatgcttcggaggacgctcttaccgctgtcatca +ctgcggcgtatctgaccatttgtcatcagcgttacctccgtactcaggctatatctaagggcatgcgccggc +tcgaggttgaacatgctcaaaaatttatcacaagactctatagttggctgttcgagaagtc---------tg +gtcgtgactatatacccggccgtcagctccagttttatgcacagtgccgccgctggttatcggcgggtttcc +accttgatccaagggtgctcgtttttgatgagtctgcgccctgc---cgctgtaggacgtttcttaagaa-- +----ggttgcaggtaagttctgctgttttatgaagtggctggggcagga------gtgcacctgttttttgg +----------------aaccagctgagggtctggttggtgaccatggt--------cacgataatgaggctt +acgaggattctgaggtcgaccaggccgagcccgcccatcttgatgtttctggaacttatgctgtccatgggc +gccaacttgaggccctgtacagggcgcttaacatcccgcacgacattgccgcccgagcctcccgcttaaccg +ccactgttgaacttattgcaagtccagatcgtttggagtgtcgtactgtgctcgggaataaggtcttccgga +caacggtggttgatggcgcccatctcgaggcgaatggtcc------------------------cgagcagt +atgtcctctcgtttgatgcctcctgccagtctatgggggccgggccgcataacctcacctatgagctcactc +ctgccggtttgcaggttaagatttcgtct-------aatggcttggattgcactgcaacattccca---ccg +ggcggagcccctagcgcggctccgggggaggtagcaactttttgcagtgccctctataggtacaacaggttc +acccaacgccattcgcttacaggcggcttgtggttgcatcctgaggggctactaggcatcttccctcccttt +tcccctgggcacctttgggaatccgctaaccctttctgtggggagggaaccttgtacacccgtacttggtca +acatccggtttttctagtgacttctcccccccggaggcagctgccgccgcgccggctgttgccac----ggg +gttgcccc---actctacaccccctgttagcgacat-----------------ttgggtgtt---------- +---------gccgccaccc----tctgaagagt--------------cccaggttgatgcggcgcctactcc +tcctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttcctgggcttgttcaaccacccggc +cctgctaaaccgaag-------------------------------------gcccccgagcgtaagtcacc +aataccgcc--------------------------------------acctccgcgtacccgccgcc----- +-------------------tcctctacacttacccggatggggcaaaggtgtatgcggggtcactgtttgag +tcagactgtgattggctggtcaatgcgtcgaatcccggccatcgtcctggcggtggcctttgccatgctttt +taccaacgctaccccgagtctt------tttacccaactgagttcatcatgcgtgacgg---tcttgccgca +tatactctaattccccggcctatcatccacgcggtggcccccgattatagggtcaagcagaacccaaagagg +cttgaggcagcataccgagagacctgctcccgccgtggtaccgccgcttacccactcctcggttcgggtata +taccaagtccccgtcagtctcagctttgacgcttgggaacgtaaccaccgccccggggatgagctctacctg +accgacctcgccgctgcc-------------------------------------------------tggtt +cgaggctaataagccggcaca--------------------------------------------------- +------------------------------------------accggccctcacaataactgaagatacagc +cc------------gcacagccaacctagcgcttgagattg------------atgctgccacggaggttgg +ccgggcctgt---gccggttgtacagttagcccaggggttgtgcattatcaatttaccgccggggtcccagg +ttcggggaagtcgcggtctatacagcagggggatgtcgacgtagtggttgttcctactcgggagcttcggaa +tagttggcgtcgccggggttttgcagccttcacaccccacacggcggcccgtgttaccacgggccgccgtgt +tgtgattgacgaggccccatcccttccaccgcacttgctgcttttacatatgcagcgggcctcgtcggtcca +tcttctcggcgacccaaatcagatccctgctatagactttgagcatgccggcctggtccccgcaatacgtcc +tgagcttgcacccaccagctggtggcatgttacccatcgctgccccgctgatgtgtgcgagcttatacgcgg +ggcctaccccaaaatccagactactagccgcgtgctgcggtctttattttggaatgag------cccgccat +tggccagaagttagtctttacacaggccgctaaggcagccaaccctggtgcgattacagttcatgaggccca +gggcgccacttttacggagactacaatcatagccacggccgatgctagggggctcattcaatcttcccgagc +tcatgccatagtcgcactcacccgccacacagagaagtgcgttatccttgatgcccccggtttgttacgtga +ggtcggtatatctgatataattgttaataacttt------------------------------tttcttgc +tggtg--gggaagtgggccaccatcgcccctctgtaataccccgcggcagtcctgaccagaacctcgcgac- +-----attacaggcctttccaccttcctgtcagattagtgcttatcatcagttggctgaggagctgggtcac +cgcccggcccctgtcgctgctgtcctgcccccttgccctgaacttgagcagggcctgctgtacatgccacaa +gagctcacggtgtctgatagtgtactggtctttgaactcacggacatagttcattgccggatggccgcccct +agccagcggaaggctgtcctatcgacgcttgtgggtaggtatggccgccggacgaagttatatgaggcggct +cattctgatgtccgagagtccctggcaagattcatcccaaccattgggcccgttcaggctactacgtgtgag +ttatacgaactggttgaggccatggtggagaagggtcaagacggctctgccgtacttgagcttgacctttgc +aatcgcgatgtatcgcgtatcacattcttccagaaagattgtaacaagttcactacaggggagaccattgcc +cacggtaaggttggtcagggtatttcggcttggagcaagaccttctgtgccctctttggcccgtggtttcgt +gctattgaaaaagaaatattggccctgctcccgcccaacatcttttacggcgatgcatacgaagagtctgtg +ttcgctgccgctgtgtctggggcaggttcatgcatg---gtatttgagaatgacttttcagagtttgatagt +actcaaaataatttctccct------------------tggccttgagtgtgtagtcatggaggaatgtggc +atgccccagtggctaattcggttgtaccacttggttcggtcagcctggattctacaggcgccgaaggagtct +cttaagggattttggaagaagcattctggtgagcccggcaccctcctttggaacaccgtttggaatatggca +atcatagcacattgctatgaattccgtggttttaaggtcgccgcttttaagggggatgattcggtggtcctt +tgtagtgactaccgtcaaagccgcaatgcagcggccctgattgcaggttgcgggctcaaactgaaggttgat +tatcgccctattgggttgtatgctggcgtggtggtggcccccggcctggggacgctacccgatgtagtgcgt +tttgctggccggctgtctgagaagaactggggtcctgggccggagcgggccgagcagctgcgccttgctgtt +tgtgattttcttcgagggctgacgaatgttgcgcaggtatgtgttgatgttgtatcccgag-------tcta +tggagttagcccagggctggtacataaccttatcggcatgttgcagaccattgctgatggtaaggcccactt +tacagagactgttaaacctgtgcttgaccttacgaactcaatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcatttcgcaacccggggctggagctcgccctc +gacagccgccccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgccgccccacgtcgccgatctacccca---------gctggggctgcgccgctgac +tgctatatcacccgcccctgatacggcccccgtgcctgatgttgattcgcgtggcgctattctgcgacgcca +gtataatttatccacatccccgctcacatcatccgttgcctctggtactaatctggttctttatgctgctcc +actaaatcctttgttaccccttcaggatggtactaacactcacatcatggctactgaggcatctaattatgc +ccagtatcgggttgtccgagctacaatccgctacaggccgttggtaccgaatgctgtcggcggctatgcaat +ctctatctcattttggcctcagactactaccacccctacgtctgttgacatgaattctataacctccactga +tgttaggatcctagttcagcccggtattgcttccgagctggttattcctagcgagcgcctccactatcgtaa +ccaaggctggcgctctgtggagacctcgggtgttgctgaggaggaggctacttctggtttggtgatgctctg +catccatggttcccctgttaattcttacaccaataccccttataccggggcgcttgggctccttgattttgc +tttagaacttgagtttaggaacctgacacccgggaacaccaacacccgtgtttcccggtatacaagcacagc +ccgtcatcggctgcgccgcggtgccgatggcaccgctgagcttactaccacagcggccacacgttttatgaa +ggacctgcatttca---ccggtacgaat---ggggtcggtgaggtgggccgtggtattgctctcacactctt +taatcttgctgacacgcttctcggtggtctgccgacagaattaatttcgtcggctgggggacagttgtttta +ttcccgccccgtcgtctcagccaatggcgagccggctgtcaagttatatacatctgtggagaatgcgcagca +ggataaagggattgctattccacatgacatagatttaggtgactctcgtgtggttattcaagattacgataa +tcagcatgagcaggatcggcccaccccttcgcctgccccgtctcgccctttttcggttcttcgtgctaatga +tgttctatggctttc-----------------------------tctcaccgctgctgagtatgat------ +cagactacatatgggtcgtccaccaacccaatgtacgtctcagataccgtcacatttgt---caacgtggca +acaggagcccaggctgtcgcccgctctcttgattggtccaaagttactctagacggccgcccccttactact +at-----ccagcagtactctaaaacattttatgttc-tcccgcttcgcgggaagctttccttttgggaggct +gggacaactaaa--gctggttatccttataattataacacgactgctagtgaccaaattttaattgaaaatg +cggctggccac------cgcgttgctat-ctctacttatactaccagccttgg--------------cgctg +gccccgtgtcagtttc-tgcagtcggtgtattaaccccacattcggctcttgcagttcttgaggatactact +gact---------accctgcccgtg----cccatacttttgatgatttttgtccggaatgtcgcgccc---t +tggtttgcaggggtgtgctttccagtc--------tactattgctgaacttcagcgcct------------- +--------taagacgaaggtaggtaaaacccgggagttttaattaa-tt----t--cctc---t------gt +gccc-cct--------tc-ctaa-atcct----aa-at---tt---------------tttc-a-------a +aatttccg----ga----------------agtccccgccccccg---------------------aaaaaa +agaaaaa---------------aaca----------------------------------------ttct-- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355227.1/17176/1-7176 |Hepeviridae isolate HESQL130, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatcccgtgtccaaactgaaattct +tattaacttgatgcaaccccggcagctcgtgttccgacctgaagtcctctggaatcatcctatccagcgagt +catccataatgagttggagcaata---ctgtcgagccc-gcgccggccgctgtctcgaggtgggcgcccacc +caagatccattaatgacaaccccaatgttctacaccggtgctttctccgcccagttgggagagacgtccagc +gctggtactcagcccctactcgtggtccagcggccaattgtcgccgttctgcgctacgtggcttgccccccg +tcgatcgtacatactgcttcgacgggttctcccgttgcgcctttgccgctgagaccggtattgctttatact +cactgcatgacctttggccctcggacgttgcggaggctatggctcgccatgggatgacgcgcttgtttgcag +ccctccactta-ccccccgaggttctgttgccacctggcacttatcacaccacctcctatcttctgattcac +gatggcaaccgcgccgttgtgacctatgagggggatactagtgcaggctacaaccacgatgtatccatactt +cgtgcatggatccgcaccactaaaatagtcggtgaacacccattggtcatagagagggtccgcgccatcggc +tgccattttgttttgctcctcactgcagcccccgagccatccccgatgccttatgttccgtaccctcgctca +acggaggtgtatgttagatccatatttggccccggt---------gggtcgccttctcttttcccatcagct +t----------gctccaccaaatcta-cattccatgccgttccggttcatatttgggaccggctcatgcttt +ttggcgccaccttagacgatcaggccttctgctgctcgcggcttatgacctacctccgcgggattagctata +aggtgaccgttggcgcattagttgccaacgagggctggaatgcctcagaggatgcgcttaccgctgtaatta +ccgcagcgtatctgactatctgccatcagcgctatttacggacccaggccatctctaaaggtatgcgccggc +tagaggttgagcatgcccaaaagtttatcacaaggctatatagctggctgtttgaaaagtc---------ag +gccgtgactacatccccggccgccagctacagttttatgcacagtgccgccgctggctctcagctggattcc +atctggaccctagggtccttgtttttgatgaggcggtcccctgc---cgttgccggagcttcctaaagaa-- +----ggctgccggaaagttttgttgttttatgaagtggttggggcagga------gtgcacctgcttcctgg +----------------agccagcggaaggcctggttggtgactgtggc--------cacgataacgaggctt +atgaagggtctgaggtggaccccgctgagcctgcccaccttgatgtttctgggacttatgcagtccatggcc +gtcagcttgaggctctatatagagcgcttaatatcccagatgacatcgcggctcgtgcgtctcgcctgacgg +ctactgtggaacttgccgccagcccaggccggcttgagtgccgtacggtgcttgggaataagacctttcgta +cttcaataaccgatggtgcccaccttgaggccaacggtcc------------------------cgagcagt +atgttctgacatttgatgattctcgccaggcaatgggggctgggcctcacagccttacgtacgaacttgttc +ctgcaggcctgcaggttaaaatatcatct-------aatggcctggattgtaccgctatattcccc---cct +ggtggggcgccaagcgctgcaccaggtgaagtagcggctttttgcagtgccttatataggtacaacaggttc +acccagcgccattcgctgaccggcgggctgtggttgcaccctgaggggctccttggtctgttcccccctttc +tccccagggcacctctgggagtctgcaaaccccttttgcggtgagagcacactttacacacggacttggtct +acatctggcttctctagcgacttctccccgcccgaggtggcccatgccgcttcggtccctgatgc----agg +gctaccctcgggtgccccctcgtctgctagcgacgt-----------------ctgggtgct---------- +---------tccaccacct----tctgaggggt--------------cggcgatcatttcgccgcccgatac +cttgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtaagccagctaacttgcctaga +cctaccacacctagg-------------------------------------ccccccgttcgtaagccgcc +tacgccacc--------------------------------------accagcccgcactcgtcggc----- +-------------------ttctttatacataccctgatggggccaaggtgtatgcaggctctctgtttgaa +tctgattgtgaatggctggttaatgcatctaaccctggccaccgccctggtggtggtctctgccacgcattt +taccagcgcttcccggagtcgt------tccatccgactgacttcgtcatgcgtgaggg---tctcgccgca +tacactttgagcccgcgcccgattattcatgctgtggctcccgactatagggttgagcaaaaccctaagagg +ctagaggcggcgtatcgcgagacctgttcccgcctcggcacagctgcttacccgctactggggtcggggatt +taccaggtgcctgtaagcttaagcttcgacgcttgggagcgtaatcaccgcccgggcgatgaactctacctc +actgagcccgcagctgcc-------------------------------------------------tggtt +tgaggctaataagccagccca--------------------------------------------------- +------------------------------------------gccggccctaacaatcactgaggacactgc +cc------------gcacagccaaccttgcgctcgagattg------------actctgcaactgaggtggg +tcgtgcttgc---gccggctgcactattaaccccggggtcgtccactaccagttcactgccggggttcctgg +ctccgggaagtctcggtctatacaacagggggatgttgatgttgtggtcgtcccaacccgtgagcttcgtaa +tagttggcggcgccgcggcttcgccgcttttacaccccacacggcagctcgtgttactgccggccggcgcgt +ggtgatagatgaggcaccctcgcttccaccgcacttgttattgctccacatgcagagagcctcatcagttca +tctcctcggtgaccccaaccagatccccgctattgactttgagcatgccggtttggtcccagcgatccgccc +tgagcttgcccctactagctggtggcatgtcacccatcgctgccccgccgacgtgtgcgagctcatacgcgg +ggcttaccctaagattcagacaaccagccgtgtgttgcggtccttattctggaatgaa------cctgcggt +gggtcagaagctagttttcacgcaggcagccaaggcggccaaccctggtgcaatcaccgttcacgaagccca +gggtgccacgtttaccgagactactattatagccacggccgatgctcgaggtcttatccaatcttcccgtgc +acatgccatcgttgcacttacacgccatacagaaaaatgcgtcattctcgacgcccctggcctactgcgcga +ggtcggcatttctgatataattgttaataacttc------------------------------tttctggc +tggtg--gtgaggtgggccaccatcgcccttctattatacctcgcggtaacccagaccagaacctagacac- +-----cttacgagcgttccccccgtcctgccaaattagtgcctaccatcagctggctgaggagctgggccac +cggccggccccggtagccgccgtcctgcccccctgccctgagctcgagcagggattactttacatgccgcag +gagctcacggtttccgatagcgtcctaatttttgaacttacggatatagttcactgccgtatggctgcccca +agtcaacgcaaggcggtcctctcgacgcttgtcggtaggtacggccgtcgaacaaagctgtatgaagcggcc +cactctgatgttcgtgagtctttagggaggttcatcccgactatcgggccggtccaggccaccacgtgtgag +ctatacgagctggttgaggccatggtggagaagggccaagacggttccgccgtgctcgagcttgatctctgc +agccgtgatgtctcgcgtattacattctttcagaaggattgtaataagtttacaacaggtgagaccattgcc +catggcaaggtgggccagggcatttcggcttggagcaagaccttttgtgctttattcggcccgtggttccgt +gccattgagaaggagatcctggctctgctcccacccaacattttctatggtgatgcctatgaggagtcagtg +ttttctgcagccatttctggggctggctccagtatg---gtttttgagaatgatttttctgagtttgatagc +actcaaaacaatttctctct------------------tggccttgagtgcgtcattatggaggagtgtggc +atgccccagtggcttatccgactgtaccatctagttaggtcagcctggaccctgcaagccccgaaagagtct +ttgaaaggtttttggaagaagcattctggcgagcctggcaccctcctttggaataccgtttggaacatggcg +atcatagcacactgctatgagttccgtgatttgagagtggcagcgtttaaaggggatgattcagtggttctt +tgcagtgattatcgccagagccgcaatgcggccgcccttatagccggttgcgggttgaaattaaaggttgat +taccggcctatagggttgtatgccggtgtcgtggtggctccgggccttggggcgctccctgatgttgtccgg +tttgccggtcgactatctgagaagaactggggcccgggccccgagcgcgccgaacagttgcgtctggcagtt +tgtgattttcttcgagggttaacgaatgttgcgcaggtttgtgttgatgttgtgtctcgtg-------ttta +tggggtcagccccgggctggtgcataaccttattggcatgttacagaccattgccgatggaaaggcccactt +tactgagactgtcaagcctgtattggatcttacaaattctattatacagaggttggaatgaataacatgtc- +t----------------tgtgcatcgcccatggg------------atcgccatgtgccctagggctgttct +gctgctgttcctcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtatcacaatccggggctggagctcgccctc +gacaaccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctcagctgccccccgtcgtcgatctgcccca---------actggggctgcgccgttgac +tgctgtttcaccagcgcctgacacggccccagttcccgacattgactctcgcggcgctatcttgcgccgtca +gtataatttgtccacctctcccttaacttcatctgttgcttctgggactaatcttgtcttatatgcagctcc +gcttaatcctctcctacctctccaagacggcaccaatacccacatcatggcgactgaggcgtctaattacgc +ccagtaccgggttgttcgggctacaatccgctatcgccctttggtgccgaatgccgtcggtggttatgcaat +ttctatttccttttggcctcagaccacgactacacctacttctgtcgatatgaattctatcacttcaactga +tgttaggattttagtccagcctggcatagcctctgaactggtcatcccaagtgaacgccttcactatcgtaa +tcagggttggcgttccgttgagacatcgggtgtggccgaggaggaggcaacatcaggcctggttatgctctg +cattcatggttcccctgttaattcctataccaacacgccctacactggggcgttggggctcctcgactttgc +gcttgagctcgaatttagaaatttgacccccgggaacactaacacccgtgtgtcccgttacactagcacagc +ccgacaccgtttgcgccgtggtgctgatggcactgctgagcttacaaccactgcagccacacgttttatgaa +ggacttgcatttca---ctgggacaaat---ggtgttggcgaggtgggccgtggtatagctttaacgctatt +taatcttgctgatacacttctcggcgggctgccgacagaattgatttcgtcggctggaggtcaactgttcta +ctcccgcccggtcgtttcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggcattgctataccgcatgatatagacttaggagattcccgtgtggttatacaagattatgacaa +ccaacatgagcaagaccggcctaccccgtcaccggccccgtcccgccctttttcagtcctccgagccaatga +tgtcttgtggctttc-----------------------------tctgactgcggctgaatatgac------ +cagactacctatggctcgtcgaccaaccccatgtatgtttcagacactgtcacttttgt---taatgtggca +acaggtgctcaggctgtcgcccgttcccttgattggtctaaggtcactttggatggccgcccacttaccacc +at-----ccagcagtactctaagacattttatgtgc-tgccacttcgtggcaaactttccttttgggaggct +ggcacgactaag--gctggttacccttacaattataatactactgctagtgatcagattttgattgagaatg +cagccggtcac------cgtgttgccat-atccacatacaccactagtcttgg--------------cgccg +gccctgtatccgtttc-cgcggtcggtgttcttgccccgcattctgctttagctgtgcttgaagacactatt +gact---------atcctgcccgtg----cccatacttttgatgatttctgccctgagtgtcgtaatc---t +cggcttgcagggctgcgcttttcagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----tc-ccc--ctt------gt +gccc-cct--------tc-taaa-ct---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355233.1/17149/1-7149 |Hepeviridae isolate HESQL028, complete genome +------------------------------------------g-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagttggttttccgacctgaggtactctggaatcaccctatccaacgggt +tatccataatgaacttgaacagta---ctgtcgggccc-gggctggtcgctgtctggaggttggggcccacc +caagatccattaatgataacccgaatgttttgcaccggtgcttcttacgaccagttgggagggatgttcagc +gctggtactctgctcctacccgcggccctgcggctaactgccgccgttctgccttgcgtggcctcccccccg +ttgaccgcacctattgttttgatggattctcccgctgctcatttgccgcagaaactggggttgctctttact +ctctgcatgacctttggccggccgatgttgcggaggctatggcccgacacgggatgacacgcttgtatgctg +cactacatctt-ccccctgaggtactactaccacctggtacttaccatacaacttcataccttttgattcac +gacggagatcgtgctgttgtgacctatgaaggtgatactagtgcaggctacaaccatgatgtttccatactt +cgtgcatggatccgtacaaccaagatagtcggcgatcatccgctggtgatagagcgtgtgcgggctattggc +tgccactttgtgctgctgctcactgcagcccctgagccgtcaccaatgccttatgttccatacccccggtcg +acagaggtctatgtccgctctatatttggtcctggc---------gggtccccatccctattcccatcagct +t----------gctctacgaaatcca-catttcacgctgttccggttcatatttgggaccggctcatgctct +ttggcgctactctggatgatcaggcgttttgctgttcacggcttatgacctacctccgcgggattagttaca +aggtcactgttggcgcccttgtcgctaatgagggatggaatgcttcggaggacgctcttaccgctgttatta +ctgcagcgtatttgaccatttgccatcagcgttacctccgaactcaagctatatccaagggtatgcgccgac +tggaggttgagcatgctcaaaaattcattacaagactttatagctggctgttcgagaagtc---------cg +gccgtgactatatccccggccgccagctccagttttatgcacagtgccgccgttggttatcggcgggcttcc +atcttgacccaagggtgcttgtttttgatgagtctgtgccctgc---cgttgtaggacattccttaagaa-- +----ggctgtgggcaagttctgctgttttatgaagtggttgggacagga------gtgcacctgcttcttgg +----------------aaccagcagagggtctggtcggcgaccacggc--------cacgataatgaagcct +atgagggctctgaagtcgaccaggccgagcccgcccatctcgatatttctgggacttatgccgtccatggcc +accaacttgaggccctgtatagggcgcttaatatcccgcatgacatcgctgcccgagcctcccgtttgactg +ccaccgtcgaacttgttgcaggctcagaccgcttggagtgccgcactgtgctcgggaataagactttccgga +cgacggtggtcgatggtgcccatcttgaggcaaacggccc------------------------cgagcagt +acgtcctttcgtttgacgcctctcgccagtctatgggggccggtccgcatagtctctcctatgagctcactc +ctgctggtctgcaggtcaagatttcatct-------aatgggctagattgcactgcaacattcccc---ccg +ggcggcgcccctagcgctgccccgggggaggtagcagccttttgcagtgccctttacaggtataacaggttt +actcagcaccattcgcttataggcggcctgtggctgcaccctgaggggttgttgggtatcttcccccctttc +tcccccgggcacctttgggagtccgcaaaccctttttgtggggagggaaccttgtacacccggacatggtca +acatctggtttttctagtgacttttccccccctgaggcagccgttgcaatgccggccgctacccc----ggg +gttacgcc---gccctacacctcctgctagtgacat-----------------ttgggtgtt---------- +---------accgccacct----tctgaagaat--------------ttcaggttgacacaactcccgcccc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcccgctcaaccatccaac +cccgctgagccaaaa-------------------------------------gctcccgtgcgtaagccgcc +gacaccatc--------------------------------------acccccgcgcacccgccgcc----- +-------------------ttctttacacctatcctgatggggcaaaggtgtacgcggggtcactgtttgag +tctgactgtgattggctggtcaatgcgtcgaatcccggccatcgtcctggaggcggcctttgccacgccttc +taccaacgctaccctgagtcct------tccacccaactgagttcattatgcgcgacgg---tcttgccgcc +tacactttaactcccaggcctattattcatgcagtggctcctgattatagggctgagcataacccaaagagg +cttgaggcagcataccgagagacttgttctcgccgcggtaccgccgcctatccactcctcggctcaggcata +taccaagtccccgtcagcctcagctttgacgcctgggagcgtaaccaccgccccggggatgagctctaccta +actgatctcgctgccacc-------------------------------------------------tggtt +tgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------accagccctcacaataactgaggatgcggc +cc------------gtacagccaacttggcactggagatcg------------atgctgctacggaggtcgg +ccgggcttgt---gccggctgtgcagttagtcctggggttgtgcactaccagtttactgctggggtcccagg +ttcggggaagtcgcgttctatacagcagggggatgttgacgtagtggttgttcctactcgggagctccggaa +tagctggcgtcgtcggggttttgcagcttttacacctcatacggcagcccgtgtcaccacgggccgtcgtgt +tgtgattgatgaggccccatccctcccaccgcatttgttgctactacacatgcagcgggcctcgtcggtcca +ccttctcggcgacccaaaccagatccctgccatagactttgagcatgccggcctggtccccgctatacgccc +tgagctcgcgcccaccagttggtggcatgtcacccatcgctgccccgctgacgtgtgcgagcttatacgcgg +ggcttatcccaaaatccaaaccactagccgcgtgctacggtctctattctggaatgag------cctgccat +tggccagaagttagtttttactcaggctgctaaggccgccaaccctggtgcgattacagtccacgaggccca +gggcgccaccttcacggaaactacaatcatagccacggctgatgctagggggctcatccaatcttcccgagc +tcacgccatagtcgcacttacccgccacacagagaagtgcgttattcttgacgcccccggcttgctacgtga +ggttggtatatcggatgtgattgttaacaatttt------------------------------ttccttgc +cggtg--gggaggtgggtcaccatcgcccctctgtgatacctcgtggtaatcctgatcagaaccttgcgac- +-----actacaggcctttccaccctcctgccagattagtgcctaccaccagttagctgaggaactcggccac +cgcccagcccccgtcgccgctgtcttgcccccttgccctgaacttgagcaaggcttgttatatatgccgcag +gagcttacggtgtctgatagcgtgctggtctttgaactcacggacatagttcactgccggatggctgccccc +agccagcggaaggccgtcctatcgacgctcgtgggtaggtacggccgtcggacgaagctgtatgaagcagct +cactctgacgtccgtgagtccctggctagattcatccccaccattgggcccgttcaggctactacatgtgag +ttatatgagctggttgaggccatggtggagaaaggtcaggatggctctgccgtgcttgagctcgacctctgt +aatcgtgatgtatcgcgtatcacatttttccagaaagattgtaacaaattcaccacaggggagaccattgcc +cacggtaaggttggccagggcatctcggcttggagtaagaccttctgtgccctgtttggtccgtggtttcgt +gctattgaaaaagaaatactagccctgctcccgcctaatattttctacggcgacgcatacgaggagtctgtg +tttgccgccgctgtgtcgggggcaggttcaagcatg---gtatttgagaatgatttttcagagtttgatagc +acccaaaataacttctccct------------------tggtctcgagtgtgtgatcatggaggaatgtggc +atgccccagtggctgatccggttgtaccatttggttcggtcggcctgggtcctacaggcgccgaaggagtct +cttaagggattttggaagaagcattctggtgagccaggcaccctcctctggaacactgtttggaacatggcg +atcatagcacactgctatgaatttcgtgattttagggttgccgctttcaagggagatgattccgtggtcctc +tgtagcgactaccgtcagagccgcaatgcagcggccctgattgcaggctgcgggctcaaactgaaggttgat +tatcgccctattgggttgtatgctggtgtggtggtggcccctggcctggggacgctacccgatgtggtgcgc +tttgccggccggctgtccgagaagaactggggccctgggccggagcgggccgagcagttgcgcctcgctgtt +tgtgactttcttcgagggttaacgaatgttgcgcaggtgtgtgtcgatgttgtatcccgag-------ttta +tggggttagccctgggttggtacataaccttattggcatgctgcaaaccatagctgatggcaaagcccattt +tacagagactgttaaacctgtgcttgacctcacgaattctattatacagcgggtggaatgaataacatgtc- +t----------------cgtgcattgcccatggg------------atcaccatgtgccctagggctgttct +gttgttgttcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtaccgcaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgtgatcagtccca----------- +------gcgcccctccgttgtcccacgccgtcgatctgcccca---------gctggggctgcgccgctgac +tgccatatcacctgctcccgatacagctcccgtacctgatgttgattcgcgcggcgccattttgcgacgcca +gtacaatttatccacatccccgctcacatcatctgttgcttcgggtactaatttggttctttatgccgcccc +gctaaaccctttgctgccccttcaggatggcactaacactcacatcatggccactgaggcatctaactatgc +ccagtatcgggtcgtccgagctacaatccgctacaggccattggtgccgaatgctgtcggcggctacgcaat +atccatctcattctggccccagactactactacccccacatctgttgatatgaactctattacttccactga +tgttaggattctagttcagcccggtattgcttctgagttggttatccccagtgagcgtctccattatcgtaa +tcagggttggcgctctgtggagacctcgggtgtggctgaagaggaggctacttctggtttggtaatgctctg +catccatggatctcctgttaactcctacaccaataccccttataccggggcgcttggactccttgattttgc +tttggagcttgagtttaggaacctgacacctggaaatactaacacccgtgtgtcccggtatacaagcacagc +ccgtcatcggctgcgccgcggtgctgatggcaccgccgaacttaccaccacagcggccacgcgcttcatgaa +ggacctgcacttca---ccggtacgaat---ggggtcggtgaggtgggtcgtggtattgctctcacactctt +taatcttgctgacacgcttcttggtggtttgccgacagaattaatttcgtcggctgggggacagttatttta +ctcccgccccgtcgtctcggccaatggcgagccgactgtcaagttatacacatctgttgagaatgcgcagca +ggataaggggatcgctattccacatgacatagatctgggtgactcccgtgtggtcatccaggactatgataa +ccagcatgagcaggatcgacccaccccctcgcctgccccttctcgccctttttcggttcttcgcgctaatga +tgttctttggctctc-----------------------------tcttactgccgctgagtacgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctcggataccgtcacatttgt---caatgtggct +acaggagcccaggctgtcgcccgttccctcgattggtctaaagtcactctggacggccgccctcttactact +at-----ccagcagtactccaaaacattttatgtty-tcccgcttcgcgggaagttatctttttgggaggcc +gggacgactaag--gccgggtatccctataattacaacacaactgctagtgatcagattttgattgaaaatg +cggctggtcat------cgtgttgctat-ttttacgtataccmccagcttggg--------------tgccg +gtcctgtgtctgtttc-tgcagttggtgttttagccccsccttcggctcttgcagtccttgaagatactatt +gact---------accctgcccgtg----ccckckcttttgatgatttttgcccggagtgtcgcgctc---t +tggtttgcaggggtgtgccttccagtc--------cactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaatcaa-tt----cc----------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355234.1/17191/1-7191 |Hepeviridae isolate HESQL143, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagttggtttttcggcctgaagtgctctggaatcatcccatccaacgagt +tatccacaatgaactagaacagta---ctgtcgggccc-gggctggtcgttgtctagagattggggcccacc +cgagatccattaatgacaacccaaatgttttgcaccggtgttttctacgaccagttgggagagatgttcagc +gctggtattctgcccctacccgtggccctgcggctaattgccgccgttctgccttgcgtggtctcccccctg +tagaccgtacctattgttttgatggattctcccgctgctcatttgccgcagaaaccggggttgccctttatt +ctctgcatgacctctggccggccgatgttgcggaggctatggcccgacacgggatgacgcgcctgtatgctg +cactacatctc-ccccctgaagtactattaccgcccggcacttaccatacaacttcataccttctgattcac +gacggtgatcgtgctgttgtgacctatgaaggtgatactagtgcaggctacaaccatgatgtctccatactt +cgtgcatggatccgcacaactaagatagttggcgatcatccgctggtgatagagcgtgtgcgggctattggc +tgtcattttgtgctgctgctcactgcagctcctgagccgtcaccaatgccttatgttccatacccccggtcg +acagaggtgtatgtccgctctatattcggccctggc---------gggtccccatccctatttccatcagct +t----------gctctacgaaatcca-cattccacgctgtcccggttcatatttgggatcggctcatgctct +ttggcgctactctggatgaccaggcgttttgctgttcacggcttatgacctacctccgcgggattagctaca +aggtcactgttggcgcccttgtcgctaatgaggggtggaatgcttcggaggacgcacttaccgctgttatta +ctgcagcgtatttgaccatttgccatcagcgttacctccgtactcaagctatatccaagggtatgcgccgac +tagaggttgagcatgcccaaaaattcattacaagactttacagctggttgtttgagaagtc---------cg +gccgtgactatatccccggccgccagctccagttttatgcacagtgccgccgttggttatcggcgggtttcc +atcttgacccaagggtgcttgtctttgatgagtctgtgccctgc---cgttgtaggacatttcttaagaa-- +----ggctgtgggcaagttctgctgttttatgaagtggttgggacagga------gtgcacctgctttctgg +----------------aaccagcagagggtctagttggcgaccaaggc--------catgataatgaagcct +atgagggctctgaggttgatcaggctgagcccgcccaccttgatgtttctggtacttatgccgtccatggcc +accaacttgaggccctgtatagggcgcttaacatcccgcatgacatcgctgcccgagcctcccgtttgactg +ccactgttgaactcgttgcaggcccagaccgcttggagtgccgcactgtgctcgggaataagactttccgga +cgacggtggttgatggcgcccatcttgaggcgaacggccc------------------------cgagcagt +atgtcctttcgtttgacgccaatcgccagtccatgggggccgggccgcatagcctctcctacgagctcacac +ctgctggtttgcaggtcaagatttcatct-------aatggcctggattgcactgcaacattcccc---ccg +ggcggggcccctagcgctgctccgggggaggtagcagccttttgcagtgccctttacagatacaacaggttc +actcagcgccactcgcttataggcggcttgtggctgcatcctgaggggttgttgggtattttcccccctttc +tcccccgggcatttctgggagtctgctaaccctttttgtggggagggaaccttgtacacccggacatggtca +acatctggtttttctagtgacttttccccccctgaggcggccgtcgcagcgccggttgctacccc----ggg +gctgcgcc---accctacacctcctgttagtgatat-----------------ctgggtgtt---------- +---------accgccacct----tctgaagaat--------------ttcaggttgacacagcgcccgttcc +cccta------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcccactcaaccatccagc +cccgctgggccaaag-------------------------------------gcccccgtgcgtgagccacc +aatgccgcc--------------------------------------acccccgcgcgcccgccgcc----- +-------------------ttctttacacctacccggatggggcaaaggtgtatgcagggtcactgtttgag +tctgactgtgattggctggttaatgcgtcgaatcccggccatcgtcctggaggcggcctttgccatgccttc +taccaacgctaccccgagtctt------tccacccaactgagttcattatgcgcgacgg---tcttgccgcg +tacactttaactcctcggcctattattcatgcagtggcccctgattatagggttgagcacaacccaaagagg +cttgaggcggcatatcgagagacctgctctcgccgcggtaccgccgcttatccactcctcggctcgggtata +tatcaagttcctgttagcctcagctttgacgcttgggagcgtaaccaccgccccggggatgagctctaccta +accgacctcgccgctacc-------------------------------------------------tggtt +cgaggctaataagccagcaca--------------------------------------------------- +------------------------------------------gccggccctcacaataactgaggatgcagc +cc------------gtacagccaacctagcactggagatcg------------atgctgctacggaggtcgg +ccgggcttgt---gccggctgcgcagttagccctggggttgtgcactatcagtttactgctggggttccagg +ttcggggaagtcgcgttccatacagcagggggatgttgacgtggtggttgttcccactcgggagctccggaa +tagttggcgtcgccggggtttcgcggcttttacacctcatacggcggcccgagtcactacaggccgtcgtgt +tgtgattgatgaggccccatccctcccaccgcatttgttgctactacacatgcagcgggcctcgtcggtcca +ccttctcggcgacccaaaccagatccctgccatagacttcgagcatgctggcctggtccccgcaatacgccc +tgagcttgcgcccaccagttggtggcatgttacccatcgctgccctgccgacgtgtgcgagcttatacgcgg +ggcttatcccaaaatccaaaccactagccgcgtgctgcggtctttattctggaatgag------cctgccat +tggccagaagttagtttttacccaggctgctaaggctgccaaccccggtgcgattacagtccatgaggccca +aggcgccaccttcacggaaactacaattatagccacggctgatgctagggggctcatccaatcttcacgagc +ccatgccatagtcgcacttacccgccacacagagaagtgcgttattcttgatgcccccggcttgttacgtga +ggtcggtatatcggatgttattgtcaacaatttt------------------------------ttcctcgc +tggtg--gggaggcgggtcaccatcgcccctctgtgatacctcgcggcaatcctgaccagaacctcgcgac- +-----actacaggcctttccaccttcttgccagattagtgcctaccaccagctagctgaagaacttggccac +cgcccagcccccgtcgccgctgttttgcccccttgccctgaacttgagcagggcttgttatatatgcctcag +gagcttacggtgtctgatagcgtgctggtctttgaactcacggacatagtccactgccggatggccgccccc +agtcagcggaaggccgtcctatcgacgctcgtgggtaggtacggccgtcggacgaagctgtatgaagcagcc +cactctgacgtccgtgagtccctggctagattcatccccaccattgggcccgtccaggctactacgtgtgag +ttatatgagctggttgaggccatggtggagaaaggtcaggatggctctgccgtgcttgagctcgacctctgc +aatcgtgatgtatcgcgcatcacatttttccagaaagattgtaacaaattcaccacaggtgagaccattgcc +catggtaaggtcggccagggcatctcggcttggagcaagaccttctgtgccctgtttggtccgtggtttcgt +gctattgaaaaagaaatattagccctgctcccgcctaatattttctacggtgacgcatatgaggagtccgtg +tttgccgccgctgtgtcaggggcaggttcaagcatg---gtatttgagaatgatttttcagagttcgatagc +acccaaaataacttttccct------------------tggtcttgagtgtgtagtcatggaggaatgtggt +atgccccagtggctaatccggttgtaccatttggtccggtcggcctggatcctacaggcgccgaaggagtct +cttaagggattttggaagaagcattctggtgagcccggcaccctcctctggaacaccgtttggaatatggcg +atcatagcacattgctatgaatttcgtgattttaaggttgccgctttcaagggagatgattccgtagtcctc +tgtagcgactaccgtcagagccgcaatgcagcggccctgattgcaggttgcgggctcaaactgaaggttgac +tatcgccccattgggttgtatgctggtgtggtggtggcccctggcctggggacgctacccgatgtggtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggctgagcagttgcgcctagctgtt +tgtgactttcttcgagggttaacgaatgttgcgcaggtgtgtgtcgatgttgtatcccgag-------ttta +cggggttagccctgggctggtgcataaccttattggcatgttgcaaaccatagctgatggcaaagcccattt +tacagagactgttaaacctgtgcttgacctcacgaactctattatacagcgggtggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtaccgcaacccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgcgatcagtccca----------- +------gcgcccctccgctgccccacgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgccgtatcacctgctcccgatacagctcctgtacctgatgttgactcgcgtggcgccatactgcgacgcca +gtacaatttatccacatccccgctcacatcatctgttgcttcaggtaccaatttggttctttatgctgcccc +gctaaaccctctgctaccccttcaggatggcactaacacacacatcatggccactgaggcatctaattatgc +ccagtatcgggttgtccgagctacgattcgttataggccattggtgccaaatgctgttggcggctatgcaat +atccatctcattctggcctcagactactactacccccacgtctgttgatatgaattctatcacttccactga +tgttaggattctagttcagcccggcattgcttctgagttggtcatccctagtgagcgcctccattatcgtaa +ccagggctggcgatctgtggagacctcgggtgtggctgaggaggaggcaacttctggtttggtaatgctttg +tattcatggctctcctgttaattcctacaccaatactccctataccggggcgcttggactccttgatttcgc +tttagagctcgagtttaggaacctgacacccgggaataccaacacccgtgtgtcccggtatacaagcacagc +ccgtcatcggctgcgccgcggtgctgatggcaccgccgaactcaccaccacagcggccacgcgctttatgaa +ggacctgcacttca---ccggtacgaat---ggggtcggtgaggtgggtcgtggtattgctctcacactctt +taatcttgctgacacgcttctcggtggtttgccgacagaattaatttcgtcggctgggggacagttattcta +ttcccgccccgtcgtctcagccaatggcgagccgactgtcaagttatatacatctgtagagaatgcgcagca +ggataaagggatcgctatcccacatgatatagatctgggtgactcccgtgtggtcatccaagactatgataa +ccagcatgagcaggatcggcccaccccctcgcctgccccttctcgtcctttttcggtccttcgcgctaatga +tgttctatggctttc-----------------------------tcttactgccgccgagtacgac------ +cagactacatatgggtcgtccactaacccgatgtatgtctcggacactgtcacatttgt---taatgtggct +acaggagcccaggctgtcgcccgttccctcgactggtccaaagttactctggacggccgccctcttactact +at-----ccagcagtactccaaaacattctatgttc-tcccgcttcgcgggaagctatccttttgggaggcc +gggacgactaag--gccggctacccctataattacaacacaactgctagtgatcaaattctgattgaaaatg +cggctggtcat------cgtgtcgctat-ttccacgtataccaccagcttggg--------------cgctg +gccctgtgtctgtctc-tgcagtcggtgttttagccccacattcggctcttgcagttcttgaagacactatt +gact---------accctgctcgtg----cccacacttttgacgatttttgcccagagtgtcgcgccc---t +tggcttgcaggggtgtgccttccaatc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaatcaa-ct----t--cctt---t------gt +gccc-cct--------tc-atag-ctatt----gc-tt---t----------------attc-t-------t +ttttct------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355236.1/17232/1-7232 |Hepeviridae isolate HESQL093, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggctaattccgccttggcgaatgctgtggtggttcggccgtttttatctcgtgtgcagactgagattct +tattaatttgatgcaaccccggcaactggttttccgtcctgaggtgctttggaatcatcccattcaacgggt +tatacataatgagttggaacagta---ttgccgggctc-gggctggccgttgcttggaggtcggggcccacc +caagatctatcaatgacaaccctaatgtcctgcaccggtgctttctacgaccagtcgggagggacgttcagc +gctggtactccgcccctacccgcggccctgcggctaattgtcgccgttcagctttgcgtggtctcccccctg +tcgaccgcacttactgctttgatgggttctcccgctgcgcttttgctgctgagactggtgtagctctttact +ctctgcacgacctctggccagccgacgttgccgaggctatggcccggcatgggatgacgcgtttgtacgccg +cactacatctc-cctcctgaggtgctgctgccgcctggtacctaccatacaacctcgtaccttctgattcac +gacggcgatcgtgctgttgtgacctatgagggtgatactagtgcggggtataatcacgatgtgtctatcctc +cgtgcatggattcgcacgaccaagatagtcggtgaccacccgttggtgatagagcgtgtgcgggctattggg +tgccattttgtgctgctactcaccgcggcccctgaaccgtcgcccatgccttatgtcccgtaccctcgatca +acagaggtgtatgttcgctctatatttggtcccggg---------ggttccccgtccctgtttccgtcagct +t----------gctctacaaaatcta-catttcatgccgtccctgttcatatctgggaccggctcatgctct +ttggcgccactttggatgaccaggcgttctgctgctcgcggctcatgacctatctccgtgggatcagctaca +aggtcactgtaggtgcccttgttgccaatgagggttggaacgcatcagaggacgcccttactgctgttatca +ctgcagcgtatttgaccatttgtcaccagcgctacctccgtacccaggcgatatccaagggtatgcgccggt +tggaggtcgagcatgcccaaaaatttatcacaagactttacagctggttatttgaaaagtc---------tg +gccgcgattatattcccggccgccagatccaattttatgcacagtgccgtcgctggctgtcagcaggtttcc +atcttgaccctagggtactcgtctttgatgagtctgtgccctgc---cgttgtagaacgtttcttaagaa-- +----ggttgcgggtaagttctgctgttttatgaagtggttagggcagga------atgcacttgcttcttgg +----------------agcctgctgagggtctggtcggtgactgtggc--------catgacaatgaggcct +acgaggggtccgaggtggaccaggctgagcccgcacattttgacgtttcggggacctatgctgtctatggcc +gccagctcgagaccctgtacagggcgcttaacatcccacacgatattgctgcccgagcatcacgtctgactg +ctactgttgagctcgtcgctggcccagatcgtttggagtgccgcactgtactcgggaataagaccttccgga +caacggtggttgacggcgcccaccttgaagctaacggtcc------------------------tgagcagt +atgttctttcatttgacgcgtcccgtcagtctatgggggccgggtcgcacaaccttacttatgagctcaccc +ccgctggtttacaggtgaagatctcgtcc-------aatggcctggactgcaccgcaacattttcc---ccg +ggcggggctcccagtgctgagccgggggaggtggcagctttttgcagcgccctttataggtacaacagattt +acccagcgtcactcgttgacgggcggcttgtggttacaccccgaggggctgctgggtattttcccccccttc +tcccctgggcatctttgggaatccgccaaccctttttgcggggaggggaccctttacacccggacatggtcc +acatctggcttctctagcgacttttccccccctgaggctgccacctctgcacaggccgccattca----ggg +gccctccc---gtcctccaccccctgccagtgacat-----------------ttgggtgtt---------- +---------gccgccgccc----tctgaggagt--------------ctcaagtcgacgctggacctgctcc +cctca------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cctccgagcctgctccactacctagg +cttgttgagcctagg-------------------------------------gcccctgtgcgtaagccgcc +gacaccgcc--------------------------------------accccctcgcacccgccgcc----- +-------------------tcctttacacctacccggacggtgctaaggtgtatgcggggtcactgtttgag +tcggattgtgactggttggttaatgcatcaaaccctggccaccgccctgggggcggtctttgtcacgccttt +taccagcgcttccctgaatcgt------tccacccggccgagtttattatgcgagatgg---tcttgctgca +tataccttggtaccccgccccattatccatgcggtggcccccgattatagggttgaacagaacccaaagagg +ctcgaggcggcgtaccgcgagacttgctctcgtcgtggcaccgctgcctacccactcttaggcgcgggtata +tatcaagttcctgttggccttagttttgatgcctgggagcgcaaccaccgtcctggcgatgagctttacctg +accgaccctgctgccgct-------------------------------------------------tggtt +cgaggctaataagcccacgca--------------------------------------------------- +------------------------------------------gccggcccttacgataactgaggacacagc +cc------------gtacggctaacctggcattggagattg------------atgcagccacagaggtcgg +tcgtgcttgc---gccggttgcacagttagtccaggaattgtgcattaccagttcactgctggggtcccggg +ctcggggaaatcgaggtctatacagcagggggacgttgatgtggtggttgtccctactcgggagcttcgtaa +taattggcgccgccgaggttttgcggccttcacacctcacactgcggcccgcgtcaccacgggccgccgcgt +tgtgatcgatgaggccccatccctaccgccacatctattgctgctgcacatgcagcgggcttcgtcggttca +cctccttggcgacccaaatcaaatccctgccatagattttgagcatgccggcctggtccccgccatacgccc +tgagcttgcgcctaccagttggtggcacgtcacacaccgttgccctgcagacgtctgcgaacttatacgtgg +agcctaccccaagatccaaaccacgagtcgtgtactgcgatctctgttttggaacgag------cctgccat +tggccagaaattagtttttacgcaggctgctaaggctgccaatccaggtgcgattacagtccatgaggccca +gggtgctactttcacggagaccacaatcatagccacagccgacgctaggggtcttattcaatcctcccgggc +tcatgccatagtcgcacttacccgtcacacagagaagtgcgtcatattagatgcccctggcttgttgcgtga +ggttggcatatcggacataattgtgaataacttt------------------------------ttccttgc +cggag--gggaggtgggtcaccaccgcccctctgtgataccccgtggtagtcctgaccagaatgttgagac- +-----cttgcaggctttcccaccctcttgccagattagtgcctaccatcagttggctgaggagctaggtcat +cgtccggctcccgttgctgcggttcttcctccctgccccgagctcgagcagggtctgttatacatgccccag +gagctcacggtgtctgacagcgtgttagtgttcgagctcacagatatagtccattgccgcatggctgctccc +agccagcggaaggctgttttatccacgcttgtgggcaggtatggccgcaggacgaagttgtatgaggcggct +cattctgatgtccgtgaatctctggctaggtttatccccactattgggcccgtccaggccaccacatgtgag +ctatatgagctggtcgaggctatggtggagaagggtcaggatggcaccgccgtgttagagctcgacctttgc +aatcgcgatgtatcgcgtattacatttttccaaaaagactgtaacaagtttactaccggggagaccatcgct +cacggtaaggttggtcagggcatttcagcctggagtaagaccttctgtgccctgttcggcccatggtttcgt +gctatcgagaaagaaatactagcgctactcccgcctaacatcttttacggcgacgcttacgaggactctgta +ttcgctgccgccgtttctggagcgggaacgagcatg---gtgtttgagaatgatttctcggagtttgatagc +actcagaataatttttccct------------------tggccttgagtgtgtgattatggaggaatgcggt +atgccccagtggttgatccggttgtaccatttggttcggtctgcctggatcctgcaggcgccgaaggagtct +cttaaaggtttctggaagaagcactctggtgagcctgggaccctcctttggaacaccgtttggaacatggct +attatagcacattgctatgagtttcgcgatttcaaggttgctgcctttaagggcgatgattcggtggtcctt +tgtagtgactaccgtcaaagccgcaatgcggcagccttgatcgcaggttgcgggctcaaactgaaggttgat +tatcgccctatcgggttgtatgcaggtgtggtggtggcccccggtttggggacattacccgatgtggtgcgt +tttgctggccggctttctgagaagaactggggcccaggccccgagcgagctgagcagctacgccttgcggtc +tgtgatttccttcgagggttaacgaatgtggcgcaggtctgtgttgatgttgtatcccgtg-------ttta +tgaagttagccccgggttggtacataaccttattggcatgctgcagactattgctgacggtaaggcccactt +cacagagactgttaaacctgtgcttgacctcacaaattctatcatacatcgggtggaatgaataacatgtt- +c----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgactggcc------------gccgtcgtgggcg-gcgcagcggcagtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgttccgcaacccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggttcctcttggcgcgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctgcccca---------gctggagctgcgccgttgac +agccgtatcaccggcccccgacacagcccctgtgcctgatgtcgattcgcgtggcgctatattgcgacggca +gtataacctttccacatccccgcttacatcatctgtcgcttcgggtactaatttggttctatatgctgcccc +gttaaaccctctcctgccccttcaggatggcaccaatactcatattatggctactgaggcatctaattatgc +ccagtatcgggttgttcgagctacgatccgctaccgccctctggtgcctaatgctgtcggtggctatgctat +ttctatctctttttggcctcagaccactaccacccccacatctgttgatatgaactctatcacttctactga +tgttaggattctggtccaacccggtattgcttccgagctggttatccccagcgagcgcctccactaccgtaa +ccaggggtggcgctctgttgagacctcgggggtggccgaagaggaggctacttccggcttggtcatgctctg +tatccatggctctcccgttaactcctacaccaataccccttatactggggcgctcgggcttcttgattttgc +actggagcttgagtttaggaatttgacacccgggaacactaacacccgtgtgtcccggtacacaagcacagc +ccgccaccgactgcgccgcggcgccgatggtactgctgaacttactaccacggcggctacacggttcatgaa +ggacttacatttca---ccggtacgaat---ggggtcggtgaggtcggccgtggtattgctttgacactgtt +taaccttgctgatacgcttctcggtggtttgccgacagaattgatttcgtcggccgggggtcagttatttta +ctcccgtcccgtcgtctcagccaatggcgagccgaccgttaagttatatacatctgttgagaatgcgcagca +agataaaggtattgccatcccgcatgacattgatctgggtgactcccgtgtggtcatccaggactatgataa +ccagcatgagcaggatcgaccgactccctcgcccgccccgtctcgcccattctctgtccttcgtgctaatga +tgtcttgtggctttc-----------------------------tctcactgctgccgagtatgac------ +cagactacttatgggtcgtctaccaatccaatgtacgtctcggatactgtgacatttgt---taatgtagcc +acaggagcccaggctgttgctcgctcccttgattggtctaaggtcactttggacggccgcccccttaccact +at-----tcagcagcattccaaaacattttacgtcc-tcccgctccgcgggaaattatctttctgggaggcc +ggcacaaccaag--gctggttacccttataattataatacaactgctagtgatcaaattttgattgagaatg +cggctggccac------cgtgtcgctat-ttccacttataccactagcttagg--------------tgccg +gccctgtgtcggtctc-cgcagtgggtgtattagccccacattcggcccttgctatccttgaggacactgtt +gatt---------atccggctcgcg----ctcatacttttgatgatttctgtccggagtgccgcgccc---t +tggtctgcaggggtgtgctttccagtc--------taccattgctgaacttcagcgtct------------- +--------taagatgaaggtaggtaaaacccgggagttctaattaa-tt----c--tttt-ttt------gt +gccc-cct--------tc-ataa-ctccc---cat-taaaat----------------aatt-t-------t +acttttct----gg----------------tttccgcgccccccg---------------------agaaaa +aagaaaa---------------aa------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355238.1/17305/1-7305 |Hepeviridae isolate HESQL128, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatctcgtattcagactgatatact +tattaatctgatgcaaccccggcagcttgtcttccggcctgaagttctttggaatcatccaattcagcgggt +tatccataatgagctggagcaata---ctgtcgagccc-gcgccggccgctgtctcgaggtgggtgctcacc +cgagatccattaatgacaaccccaatgttctgcaccggtgtttccttcgcccagtcgggagagacgtccagc +gctggtactccgcccctacccgtggcccagcggctaactgccgccgctctgcgctgcgtggtttgccccctg +tcgatcgcacatattgcttcgacgggttctcccgctgcgcctttgccgctgagaccgggattgctttgtact +cactgcatgacctttggccctcggacgttgcggaggccatggctcgtcatgggatgacgcgcttgtatgctg +ccctccaccta-ccccctgaggttctgttaccacctggcacttaccacacaacctcctatcttttgattcac +gacggtaatcgtgctgtcgtgacttatgagggtgacactagtgcgggctataatcatgatgtgtctatactt +cgtgcatggatccgcaccactaaaatagtcggtgatcacccgctggtgatagagagggtccgcgccatcggc +tgccattttgtcctactccttactgcagcccccgagccatccccaatgccttatgttccgtaccctcgctca +acggaggtgtatgttagatctatatttggtcctggt---------gggtcaccttctcttttcccgtcagcc +t----------gctccactaagtcta-cattccacgccgtcccggtccatatctgggaccggcttatgctct +ttggtgccaccttagatgaccaggccttttgctgctcgcggcttatgacctatctccgtgggattagctata +aagtgactgttggcgcactcgtcgccaacgagggctggaatgcctcggaggatgcgctcaccgctgtgatta +ctgcagcgtatttgactatttgccatcagcgctacctacgaacacaggccatttctaaaggcatgcgccggc +tagaggttgagcatgctcaaaagttcatcacaaggttatatagttggctgtttgaaaagtc---------ag +gtcgtgattatatccccggccgccagctccagttttatgcgcagtgccgccgttggctctcggctggctttc +atctggaccctagagttctcgtctttgacgaggcagtcccctgc---cgctgccggagcttcttaaagaa-- +----agttgccgggaaattttgttgttttatgaaatggttggggcagga------gtgcacctgcttcttgg +----------------agccagcggaaggcctggttggtgactgtggc--------catgacaatgaagcct +atgaggggtctgaggtggaccccgccgagcctgctcaccttgatgtctccgggacctacgcggtccacggtc +gtcagcttgaggctctatatagagcgcttaatatcccggatgacattgcggctcgtgcgtcacgcctgacgg +ctactgtagaacttgccgccagcccgggccgactcgagtgccgcacggtgcttgggaacaagacttttcgca +catcaataactgatggcgcccatctcgaggccaacggccc------------------------tgagcagt +atgtcttgacatttgatgactctcgccaggctatgggagctgggccacatagcctcacgtatgaacttgtcc +ctgccggtttgcaagttaaaatgtcttct-------aatggcttggattgtaccgctatattcccc---cct +ggtggggcaccaagcgcagcaccaggtgaagtggcggctttctgtagcgccctatacaggtacaataggttt +acccagcgccattcgctgaccggcgggctgtggctgcaccccgaggggcttcttggcctgtttcctcctttt +tccccagggcacctctgggagtctgcaaaccccttttgtggtgagagcacactttacacacgaacttggtct +acatctggtttttctagcaatttttctccacccgaggcggcctgtgccaccccagcgcccgacat----cgg +gttacccccgggtgcctcctcgtccgctagtgatgt-----------------ctgggtgtt---------- +---------tccactgccc----tctgagaagt--------------cggagatcgccccaccacccgcaac +cccagtcagtgagccagctaa---------------------------------------cctttc------ +------------------------------------------------------------------------ +-gagtcttgc-------------------------------------------------------------- +-------------tacacct----gggcctcctgcccgtgagccgcctacaccgccgccggctctaaccccg +g---------------------------------------------tcagtaactcagctagcccgtctaac +cttactatacatagg-------------------------------------cctcccgcccgtaagccaac +tacaccacc--------------------------------------accggcccgcactcgccggc----- +-------------------tcctttatacataccctgatggggccaaggtatatgcaggctctttgtttgag +tcagattgtgactggctggttaacgcatctaaccctggccaccgtcctggtggtggtctttgccatgcattt +taccagcgctttccggagtcgt------tttattcgactgattttgtcatgcgtgaagg---tctcgccgcg +tataccttgagcccgcgcccgattattcatgcagtggcccccgactatagggtcgagcagaaccccaagagg +ctagaggcggcatatcgcgagacctgttctcgcctcggcacagctgcttatcccctacttgggtcagggatc +taccaggtcccagtgagtttaagtttcgacgcctgggagcgtaaccaccgcccaggcgacgaactgtacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagccagccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacactgc +cc------------gcacagctaaccttgcgcttgagatcg------------actctgccactgaggtggg +ccgtgcctgc---gccggttgtactattaaccccgggattgtccattaccagttcaccgccggagtccctgg +ctctgggaagtctagatctatacagcagggggatgttgatgtagtggtcgtgccaactcgtgagcttcgtaa +cagttggcgacgccgtggctttgctgcttttacaccccacacagcagctcgcgttactgccggccggcgagt +ggtgatagatgaggcaccctcgctcccaccgcacttgttgctgctccatatgcagcgagcctcatcggtcca +cctccttggtgaccctaaccagatccctgccattgactttgagcatgccggcttggtcccagcgatccgccc +tgagctagctcctaccagttggtggcatgtcacccaccgctgccccgccgatgtatgtgagcttatacgcgg +ggcctaccccaagatccagacgaccagccgtgtggtgaggtctttattctggaatgag------cctgcggt +gggtcagaggttggttttcacgcaggcagctaaagcggctaaccccggcgcaattaccgtccatgaggccca +gggtgccacgttcactgagactactatcatagccacggccgacgctagaggtcttattcagtcatcccgcgc +acatgccatcgttgcgcttactcgccatacagaaaaatgcgtcatcctcgacgctcctggtcttctgcgtga +ggtcggcatttctgacataattgttaataacttt------------------------------ttcttggc +cggtg--gtgaagtgggccaccatcgcccttctactataccgcgtggtaacccggaccaaaatttagacac- +-----cctacgggcgttccctccgtcttgccaaattagtgcctaccaccaattggctgaggagctgggtcac +cggccggcccctgtggccgctgtacttcccccctgccctgagcttgagcaggggctactctatatgccgcag +gagcttacggtgtccgatagcgtcctagtttttgaactcacggacatagtccactgccgtatggccgcctct +agtcagcgtaaagcggtcctctctacgcttgtcggcaggtacggccgccgaacgaagctgtatgaggcggcc +cattctaatgttcgtgagtctttaggggtgttcattcctactatcggcccggtccaagccaccacatgcgag +ctatatgagctggttgaggccatggtggaaaagggccaggacggctccgccgtgcttgagcttgacctctgc +agccgtgatgtctcgcgtatcacattctttcagaaggattgtaataaatttacaactggtgagaccattgcc +cacggcaaggtgggccagggcatttcggcctggagtaagaccttctgtgccttatttggcccgtggttccgt +gccattgagaaggagatcctggctctgctcccacccaacgtcttttatggcgatgcttatgatgattcagtg +ttttctgcagccatttctggggctggctccagtatg---gtttttgagaacgatttttctgagtttgatagc +acccaaaacaatttttctct------------------tggccttgagtgtgtcatcatggaagaatgtggc +atgccccagtggcttatccgactgtatcatttagttagatcagcctggactctgcaagccccgaaagagtct +ttgaaaggtttctggaagaagcattccggtgaacctggcactctcctctggaacaccgtttggaatatggcg +atcatagcacactgctatgaattccgcgacctgagggtggcagcgtttaagggggatgattcagtggttctt +tgcagtgattaccgccagagtcgcaatgcggccgctctgatagccggctgtgggttgaagttgaaggttgat +taccggcctataggtttgtatgccggcgttgtagtggctccgggcctcggggcacttcctgatgtagtccgg +ttcgccggtcgattatctgagaagaactggggcccgggccctgagcgcgccgaacagttgcgcttagcagtt +tgtgatttccttcgagggctgacgaatgttgcgcaggtctgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacagactattgctgatggaaaggcccattt +tactgagactgtcaaacctgtgctggatctcacaaattctatcatacagaggttggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgccatgcgccctaggggtgttct +gctgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcctatcacaatccggggctggagctcgctctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgccgtcgatctgcccca---------actggggctgcgccgctgac +tgctgtctcaccagcgcctaacacggccccagtccctgatgttgactctcgtggtgctatcttgcgccgtca +gtacaatttgtccacctctcctttaacttcatctgttgcttctggaactaaccttgttttgtatgctgcccc +gcttaaccctcttctgcctctccaagatggcaccaatactcatatcatggcgactgaggcgtctaattacgc +ccagtatcgggtcgtccgggcaacaatccgctatcgccctttggtgcccaatgccgtcggtggttatgcaat +ttctatttccttctggcctcagactacaactacacccacctctgttgatatgaattccattacctctactga +tgttaggattttagtccagcctggtatagcctctgagctggtcatcccgagtgagcgccttcactaccgtaa +tcaaggctggcgctctgttgagacatcaggtgtggccgaggaggaggcgacatctggtctggtcatgctttg +tattcatggttcccctgttaattcttataccaatacgccctatactggggcattggggctcctcgattttgc +actcgaactcgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgatacactagtacagc +ccggcaccgtttacgtcgtggcgccgatgggacagccgagcttacaacaactgcagccacacgttttatgaa +ggacctgcatttca---ctgggacaaat---ggtgttggtgaggttggccgcggtatagccctaacgctatt +taatcttgctgatacacttctcggcgggctgccgacagaattgatttcgtcggctggaggtcaattgtttta +ctcccgcccggtcgtctcggccaatggcgagccgactgttaagttatacacctctgtcgagaatgcgcagca +ggacaagggcattgctataccgcatgatatagacttaggggattcccgtgtggttatacaagactatgacaa +ccaacatgagcaggaccggcctaccccctcgccggccccgtctcgccccttctcagtccttcgggccaatga +tgttttgtggctctc-----------------------------tctgactgcggctgaatatgac------ +cagaccacttatggctcgtctaccaaccccatgtatgtttcagatacagttacatttgt---taatgtggcg +acgggtgcccaggccgttgcccgatccctcgattggtccaaagtcactttggatggtcggccactcactacc +at-----ccagcagtactccaagacattttatgtat-tgccgcttcgtggcaagctttccttctgggaagct +ggtacgactaag--gctggctacccttataattataacactaccgctagtgatcagatcctgatcgagaatg +cagccggccac------cgtgttgctat-atctacttacaccactagtcttgg--------------tgccg +gccctgtgtctgtttc-tgcgratggcgttcttgccccgcattctgctttagccgtgcttgaagacactatt +gact---------accctgcccgtg----cccatacttttgatgatttttgccctgagtgccgtaatc---t +tggtttgcagggctgtgctttccagtc--------tactgttgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt-----c-tcct--tt------gt +gccc-cct--------tc-taaa-ct-tc----gc-tt-tgt----------------tatt-t-------c +ttttttct----ggg---------------ttccc-ccccccccg---------------------gaa--- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355239.1/17253/1-7253 |Hepeviridae isolate HESQL152, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcatcactactgccattgag---caggctgctctggc +tgcggctaactctgccttggcgaatgctgtggtggttcggccgtttctatcccgtgttcagactgatatcct +tattaacttgatgcaacctcgacagcttgttttccggcccgaagttctctggaatcacccgatccagcgagt +catacataatgagctggagcaata---ctgccgggccc-gcgctggccgctgtcttgaggtcggtgctcacc +ctagatctattaatgataacccaaatgttttgcatcggtgctttcttcgcccggttggaagagacgttcagc +gctggtattccgcccccacccgtggcccggcggctaactgccgccgttctgccctacgtggtttgcccccag +tcgatcgcacctattgcttcgacgggttctcccgctgcgcctttgccgctgagaccgggattgctttatact +cactgcatgacctttggccctcggacgttgcggaggctatggcccgccacgggatgacgcgcttgtatgctg +ccctccaccta-ccccctgaagttctgttaccacccggaacctatcacacaacctcctatctcttgattcac +gacggcaatcgtgccgtcgtgacttatgagggggacaccagtgcgggctataaccacgatgtatctatactt +cgtgcatggattcgcaccactaaaatagttggtgaccacccactggtaatagagagggttcgcgcaatcggc +tgccattttgtcttactccttaccgcagcccccgagccatccccaatgccttatgttccgtaccctcgttca +acagaggtgtacgtcagatccatatttggtcctggt---------gggtcaccttctctcttcccatcggcc +t----------gctctaccaagtcta-cattccatgctgttccggtccatatctgggaccggcttatgcttt +ttggtgccaccctagatgaccaagccttctgctgctcgcggcttatgacctatctccgcgggattagctata +aagtgactgttggcgcacttgtcgccaacgaaggctggaatgcctcggaagatgcgctcaccgctgtgatta +ctgcagcgtatctgaccatttgtcatcagcgctacctacggacgcaggccatctctaagggcatgcgccggc +tagaggttgagcatgcccaaaagtttattacaaggttatatagttggctgtttgaaaagtc---------ag +gccgtgactacatccccggtcgccagctccagttttatgcgcagtgccgccgctggctctcggctggtttcc +atctggaccctagagtcctcgtttttgacgaggcggtcccctgc---cgttgccggagtttcttaaagaa-- +----ggctgccggaaaattttgttgttttatgaaatggttggggcagga------gtgcacctgcttcttag +----------------agccagcggaaggcctggtaggtgattgcggc--------catgataatgaggcct +acgaaggatctgaggtggaccccgctgagcccgcccatcttgacgtttctgggacctatgcggtctatggcc +gccagcttgaggctctatatagagcgctcaatattccagatgacatcgcggcccgcgcatctcgtctgacgg +ctactgtggaactagccgccagtccaggccgactcgagtgccgcacggtgcttgggaacaagacctttcgta +catcaataactgacggtgctcatctcgaggccaatggccc------------------------tgagcagt +atgttttgacatttgatgactcccgccaggctatgggggctgggcctcacagcctcacgtacgaacttgtcc +ccgccggtctgcaggttaaaatatcttct-------aatggcttggattgtaccgccacattcccc---ccc +ggtggagcaccaagtgctgcaccgggtgatgtggctgccttttgtagcgccctatataggtataataggttc +gcccaacgccattcgctgaccggtgggctatggctgcaccctgaggggctccttggcctgttccctcctttc +tcgccggggcatctctgggagtctgcaaatcccttttgcggtgagagcacactttatacacgaacttggtcc +acatctggtttctctagtgacttctccccacccgaggtggcccacgccgccccagtccctaacat----ggg +gctaccctcgggtgccccctcgtccactagtgatat-----------------ttgggcgtt---------- +---------tccaccgctc----tccgaggggt--------------cggcggtcgtcccgccactagtaac +cccggtcagtaagccaactag---------------------------------------cctgct------ +------------------------------------------------------------------------ +-tagtcccac-------------------------------------------------------------- +-------------tacactc----aggcccctcgtctgcaagccacctacaccatcaccgtccctagccccg +g---------------------------------------------ttagtaagccagctaatccgcttagt +cttgctacacctgga-------------------------------------cctcccgtccgcgagccgcc +cacaccgcc--------------------------------------atcgactcgcactcgccgac----- +-------------------ttctttatacatatcctgatggtgccaaggtgtatgcaggctctctgtttgag +tcagactgcgattggctggttaatgcatctaaccctggccaccgccctggtggtggtctttgtcatgcattc +taccagcgcttcccggagtcgt------tttatccaactgattttgtcatgcgtgatgg---ccttgccgca +tacactttgaacccgcgcccgattattcatgctgtggctcccgactatagggttgagcagaaccccaaaagg +ttagaggcggcatatcgagagacctgttctcgcctcggtacagctgcctacccgctactggggtcagggatc +taccaggtccccgtgggcttaagttttgacgcctgggagcgtaaccaccgccctggcgacgaactctacctt +actgagccagccgccgcc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccggccctaacaattactgaggacactgc +cc------------gcacagctaacctcgcactcgagattg------------actctgccactgaggtggg +tcgtgcttgt---gccggctgcactgtcagccccgggattgtccactaccagtttactgccggagttcccgg +ttctggaaagtctaggtctatacagcagggagatgttgatgtcgtggtcgtaccaacacgtgagctccgtaa +cagctggcggcgccgtggctttgctgcttttacaccccacacagcggctcgcgtcactgccggccggcgtgt +ggtaatagatgaggcaccctcacttccaccacatttgctgttacttcatatgcagcgagcctcatcggtcca +tcttctcggtgaccccaaccagatccctgccattgatttcgagcatgccggcctggtcccagcgattcgccc +agagctagcccccaccagctggtggcatgtcacccaccgctgccccgccgatgtatgtgagctcattcgtgg +ggcttacccgaagatccagacgaccagccgtgtgttgaggtctttattttggaatgag------cctgcggt +gggtcagaagctggttttcacgcaggcagccaaggcagccaaccccggctcaattactgtccatgaggccca +gggcgccacgtttactgacactaccatcatagccactgccgatgctaggggccttattcaatcttctcgtgc +acatgccattgttgcacttacccgccatacagaaaaatgcgtcattcttgacgcccccggcctactgcgtga +ggtcggtatttctgatataattgttaataacttc------------------------------tttctggc +tggcg--gtgaagttggccaccatcgcccttctattatcccccgcggcaacccagaccagaacttagacat- +-----tttacaagcgttcccaccgtcctgccaaattggtgcctaccaccagttggctgaggagcttggtcat +cggccggccccagtggccgccgttctccccccttgccctgagcttgagcaggggttactctatatgccgcag +gagcttacggtgtccgatagtgtcctaatttttgagcttacggacatagttcactgccgtatggccgcccct +agtcaacgtaaggcggtcctctctacgctcgtcggcaggtacggccgccgaacgaagctgtatgaagcggcc +cattctgatgtccgcgagtctttagggagattcatccccactatcggaccagtccaagccaccacatgtgag +ttatatgagctggttgaggctatggtggaaaagggccaggacggttctgccgtacttgagcttgatctttgc +aaccgtgatgtctcgcgcatcacatttttccagaaggactgtaataaatttacaacaggtgagactattgcc +cacggtaaggtgggccagggcatttcggcctggagcaagaccttttgtgctttattcggcccgtggtttcgt +gccattgagaaggagattctggccctgctcccacctaacattttctatggcgatgcctatgaggagtcagtg +ctttctgcagctatttctggggctggctccagtatg---gtctttgagaatgatttctctgagtttgatagc +acccaaaacaatttctccct------------------tggccttgagtgtgtcatcatggaggagtgtggc +atgccccagtggcttatccgactgtaccatttagttagatcagcttggatcctgcaagctccgaaagagtct +ctgaaaggtttttggaagaagcattccggcgagcctggtaccctcctttggaacaccgtttggaacatggcg +atcatagcacactgctatgaattccgcgacttgaaagtagcagcgtttaagggggatgattcggtggtcctc +tgcagcgattatcgtcagagtcgcaatgcagccaccctgatagccggttgtggattgaaactgaaagttgac +taccggcctataggtttgtatgccggtgttgtggtggccccgggcctcggtgcgcttcctgatgttgtccgg +tttgccggtcgattatccgagaagaactggggtccgggtcctgagcgcgccgaacagttacgtctagcagtt +tgtgatttccttcgaaggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccctgggctcgtgcataaccttattggcatgctacagactattgctgatgggaaggcccactt +tactgagactgtcaagcctgtgcttgatcttacaaattccatcatacagaggttggaatgaataacatgtc- +t----------------tctgcattgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcctcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gtcgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcatatcacaatccggggctggagctcgccctc +gacagccagctcg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------gctggggctgcgccgctaac +tgccgtttcaccagcacctgatacggccccagttcccgacgtcgattctcgcggtgctatcctgcgccgtca +gtataatttgtctacttctcctttaacttcatctgttgcctctggaaccaatcttgttctgtatgcagcccc +gcttaaccctctcctgcccctccaagacggcaccaatactcacatcatggcaactgaggcgtccaactatgc +tcagtatcgggttgtccgggctacaatccgttatcgcccattggtgccgaatgctgtaggtggttacgcaat +ttctatctctttctggcctcaaaccacaaccacacccacctctgttgatatgaattctataacttctactga +tgttaggattttagtccagcctggcatagcctctgagctggtcatcccgagcgagcgcctccattatcgcaa +ccaaggttggcgctctgttgagacatcaggtgtggccgaggaggaggcgacgtcaggtttggtcatgctttg +tattcatggctcccctgttaattcttatactaatacaccctatactggggctttggggctcctcgactttgc +gcttgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtttcccgttacaccagtacagc +ccggcaccgtctgcgtcgtggtgctgatgggacagctgagctcacaactaccgcagccacacgttttatgaa +ggacttacatttca---ccgggacaaat---ggtgttggcgaggtgggccgtggtatagccctaacgctatt +taatcttgctgatacacttctcggtggcctgccgacagaattaatttcgtcggctggaggtcaattgtttta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttgtacacctctgtcgagaatgcacagca +ggacaagggcattgctataccacatgatatagatctaggggactcccgtgtggttatccaagactacgacaa +ccaacatgaacaggaccggcctaccccgtcaccggctccgtcccgccccttctcagtccttcgagccaatga +tgtcctttggctctc-----------------------------tctgactgcggctgaatatgac------ +cagactacttacggctcgtcgaccaaccctatgtatgtctcagacactgtcacatttgt---caatgtagcg +acaggtgcccaggctgttgcccgatctcttgattggtccaaggtcactttggatggccggccacttactact +at-----ccagcagtattctaagacattttatgtgc-tgccgcttcgtggcaagctttccttctgggaagct +ggtacgactaag--gctggctacccttataattataacaccactgctagtgaccagattcttatcgagaatg +cggctggccac------cgtgttgctat-atctacctatactactagtcttgg--------------tgctg +gccccgtgtctgtttc-tgcggcaggcgttcttgctccgcattctgctttagctgtgcttgaagatactatt +gatt---------atcctgctcgtg----ctcacacttttgatgatttctgtcctgagtgccgtgacc---t +cggcttgcagggctgtgctttccaatc--------tactgtagctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----tc-ccc--ctt------gt +accc-c------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355240.1/17247/1-7247 |Hepeviridae isolate HESQL177, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggtccggccgtttttatctcgtgttcaaactgatatcct +tattaacttgatgcaacctcgacagcttgtgttccggcccgaagtcctctggaatcacccgatccagcgagt +tatacataatgagctggagcaata---ctgccgagccc-gcgctggccgctgtcttgaagtgggcgctcatc +caagatctattaatgacaaccctaatgttttgcaccggtgctttcttcgcccggttgggagagacgttcagc +gctggtattctgcccccactcgtggtccagcggctaattgtcgccgttccgcgctgcgtggcttgccccctg +tcgaccgcacatactgctttgacgggttttcccgctgcgccttcgccgctgagaccgggatcgctttatact +cactgcatgacctttggccttcggatgttgcggaggctatggctcgccatgggatgacgcgcttgtttgctg +cccttcaccta-ccccctgaagttctgttaccacctggaacttaccacacaacctcatatcttttgattcac +gacggcaatcgtgccgtcgtgacttatgagggggacactagtgcgggttataaccacgatgtgtccatactt +cgtgcatggatccgcaccaccaagatagttggtgatcacccgctggtaatagagcgggtccgcgccatcggc +tgccattttgtcttactccttactgcagcccccgagccgtccccgatgccttatgtcccgtaccctcgttca +acggaggtgtatgttagatccatatttggccctggc---------gggtcgccttcccttttcccatcagcc +t----------gctctaccaagtcta-cattccatgctgtcccggtccatatctgggaccggcttatgcttt +ttggtgccaccttagatgaccaggccttttgttgctcgcggctcatgacctacctccgtgggattagttata +aagtgaccgttggcgcacttgtcgccaacgaaggttggaatgcctcagaggatgcgctaaccgctgtgatta +ctgcagcgtatttgactatttgccatcagcgctacctacgaacccaggccatttctaaaggtatgcgccggc +tagaggttgagcacgctcaaaaatttatcacaaggctatatagctggctgtttgaaaagtc---------ag +gccgtgattacatccccggccgccagctccaattttatgcgcagtgccgccgctggctctcggctggcttcc +atctggaccctagagttctcgtctttgatgaggcggtcccctgc---cgatgccggagttttctaaagaa-- +----ggccgccggaaaattttgctgctttatgaagtggctggggcagga------gtgcacttgtttcctgg +----------------agccagcggaaggcctggttggtgattgtggc--------catgataacgaggcct +atgaggggtctgaggtggaccctgccgagcctgctcaccttgatgtctctgggacttatgcggtccacggcc +gccagcttgaggccctatatagagcgcttaacatcccagatgacattgcagcccgtgcgtcgcgtttaacgg +ccaccgtggagcttgccgccagtccaggcagactcgagtgccgcacggtgcttgggaacaagatcttccgta +catcaataactgacggagcccacctcgaggccaacggtcc------------------------tgagcagt +acgtcctgacatttgatgattctcgccaagtgatgggggctgggcctcacagcctcacgtatgaactcgtcc +ctgctggtctacaagttaaaatatcttct-------aacggcctggattgcaccgccatattccct---cct +ggtggggcgccgagcgccgcaccaggcgaagtggcggctttctgtagtgccctatacagatacaataggttc +acccagcgccattcgctgactggcgggctgtggttgcaccctgaggggctccttggcctgttcccccctttc +tccccggggcatctttgggagtctgctaaccctttttgcggtgagagcacactttatacacgaacttggtcc +acatctggtttttctagcgacttctccccgcctgaggcggcctatgccgccccagtccctgatat----ggg +gttgacctcgagcgccccctcctccgctagtgatat-----------------ctgggtgtt---------- +---------cccaccaccc----tctgaggggt--------------cggcgatcattccgccacccgcaac +ccccgtcggtaagtcatctaa---------------------------------------tccgcc------ +------------------------------------------------------------------------ +-tggtcatac-------------------------------------------------------------- +-------------tacgccc----aggccacctgcctgtgggccgtctataccaccaccgaccctgacctca +g---------------------------------------------ctagtaagccagctaattcgcctagc +ctcactgcacctaga-------------------------------------ccccccgtttgcgagccgtc +tacaccgcc--------------------------------------atcggctcgtactcgccggc----- +-------------------ttctttacacatatcccgatggggccaaggtgtatgcgggctctttgtttgag +tcagactgttactggctggttaatgcatctaaccccggtcaccgccccggtggtggtctctgccatgcattc +taccagcgctttccagagtcgt------tttatccgactgattttattatgcgcgaggg---tctcgccgca +tatactctgagcccgcgtccgatcattcatgctgtggcccctgactacagggttgagcaaaaccccaagagg +ctggaggcggcatatcgtgagacctgctcccgcctcggcacagctgcctatccactactggggtcagggatt +tatcaggtccctgtgggtctaagctttgacgcctgggagcgtaatcaccgcccaggcgatgaactttacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagcctaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacaccgc +cc------------gcacagccaaccttgcgcttgagatcg------------actccgccactgaggttgg +tcgtgcctgc---gctggctgcactattagccccgggattgtccactaccagttcaccgccggggttcctgg +ctccgggaagtctaggtctatacagcagggggatgttgatgttgtggtcgtgccaacccgcgagcttcgtaa +tagttggcggcgccgcggctttgctgctttcacacctcacacagcagctcgtgtcactgccggccggcgtgt +ggtgatagatgaggcaccctcgcttccaccgcacctgctgttgctccacatgcagcgagcctcatcagttca +tcttctaggcgatcccaaccagatccccgccattgactttgagcacgccggtttggtcccggcgattcgccc +tgagctagctcctactagttggtggcatgtcacccaccgttgccccgctgatgtatgtgagctcatacgcgg +ggcctacccaaagattcagacgaccagccgtgtgttgagatctctattttggaatgag------cccgcgat +aggccagaggctagtttttacgcaggcagccaaggccgccaatcccggcgcaattaccgttcacgaggccca +gggggccacgtttactgagactaccatcatagccacggccgacgctagaggtcttattcaatcttctcgcgc +acatgccatcgttgcgcttactcgccatacagaaaagtgcgttattctcgacgctcctggcctattgcgtga +ggttggcatttctgatataattgtaaataatttc------------------------------ttcctggc +tggtg--gtgaagtgggccaccatcgcccttctaccatcccccgcggcaacccagatcggaacttagacac- +-----cctccaagcgttccctccgtcctgccaaatcagcgcttaccaccagttggctgaggagctgggccac +cggccggccccagtggccgccgtcctgcccccctgccctgagcttgagcaggggttactctacatgccgcag +gagctcactgtgtccgatagtgtcctgatttttgaactcacggacatagtccactgccgtatggccgcccct +agtcaacgtaaggcggttctttctacgctcgtcggcaggtacggccgccgaacgaagctgtatgaagcggcc +cactctgatgtccgcgagtctttagggaggttcatccccactattggaccggtccaggccaccacatgtgag +ctatatgaactggttgaggccatggtggagaagggccaggatggttccgctgtgcttgaacttgacctctgc +aaccgtgatgtctcgcgtattacatttttccagaaggattgtaacaaatttacaacgggtgagactattgct +cacggtaaggtgggccaggggatttcggcttggagtaaaaccttctgtgctttatttggcccatggttccgt +gccattgagaaggaaattctggctctgctcccacctaatattttctatggtgatgcctatgaggagtcagtg +ttctctgcggccatttctggggctggctccagtatg---gtttttgagaatgatttttctgagtttgacagc +acccaaaataatttctctct------------------tggccttgagtgcgttattatggaggagtgtggc +atgccccaatggcttattcgactgtaccatttagttagatcagcctggattctgcaagccccgaaagagtct +ttgaaaggcttctggaagaagcactccggcgagcctggcactctcctttggaacaccgtctggaacatggcg +atcatagcacactgctatgaattccgtgacctgagagtggcagcgtttaaaggggatgattcagtggttctt +tgcagcgattaccgtcagagccgtaatgcggccactctgatagccggttgtgggttaaaattgaaggctgat +taccggcctataggtttgtatgccggcgttgtagtggctccaggcctcggggcacttcctgatgttgtccgc +tttgcaggtcgactatctgagaagaattggggcccgggccccgagcgcgccgaacagttgcgcctagcagtt +tgtgattttcttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttggcccagggctggtgcataaccttattggcatgctacagactattgctgatggaaaggcccattt +tactgagactgtcaagcccgtgctggatcttacaaactctatcatacagaggttagaatgaataacatgtt- +c----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcctcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcagtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaatccggggctggagctcgcccta +gacagccggtccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtttcaccagcgcctgatacagccccagtccctgatgttgactctcgtggtgctatcctgcgccgtca +gtataatttgtccacctcccctttaacctcatctgttgcttctggaactaatcttgtcttgtatgccgcccc +gcttaaccctctcctgcctcttcaggacggcaccaatactcatatcatggcgactgaggcgtctaattacgc +ccagtaccgggttgtccgggctacaatccgctatcgccccttggtgccgaatgccgtcggtggttatgcaat +ttctatttctttctggcctcagactacaactacacccacctctgttgacatgaactctattacttctactga +tgttaggatcttagtccagcctggcatagcttctgaattggtcatcccgagtgagcgcctccactatcgcaa +tcaaggctggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggcctggtcatgctttg +tattcatggctcccctgtcaactcttataccaacacgccctatactggggcgctggggcttcttgattttgc +actcgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgttatactagtacagc +ccggcaccgcctgcgtcgtggcgctgacgggacagctgagctcacaactactgcagccacacgttttatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggtgaggtgggtcgtggtatagccctaacgctgtt +taatcttgccgatacacttctcggcgggttgccgacagaattgatttcgtcggccggaggtcaactgtttta +ctcccgcccggttgtctcagccaatggcgagccaactgttaagttatacacctctgtcgagaatgcacagca +ggataagggtattgccataccacacgatatagatctgggggattcccgtgtggttatacaagattatgacaa +ccaacatgaacaggaccggcctaccccgtcgccggccccatcccgtcccttctcagtccttcgggccaatga +tgtcttgtggctctc-----------------------------tctgactgcagctgaatatgat------ +cagactacttatggctcgtcgaccaaccctatgtatgtctcagacactgtcacatttgt---taatgtggcg +acaggcgcccaggctgttgcccgatctcttgattggtccaaggtcactcttgacggccggccacttactacc +at-----ccagcagtactctaagacattttatgtgc-tgccgcttcgtggcaagctttccttttgggaagct +ggtacgactaag--gctggctacccttataattacaacactactgctagtgaccagattctgattgagaatg +cagccggccac------cgtgttgctat-atctacttacactactagtcttgg--------------cgccg +gccctgtgtctatttc-tgcagtcggcgttcttgccccgcactctgctttagctgtgcttgaagatactatt +gatt---------accccgcccgtg----cccatacttttgatgatttctgccctgagtgccgcaacc---t +cggcctacagggctgtgctttccagtc--------cactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattaa-tt----cc-c-c--ctt------g- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355241.1/17257/1-7257 |Hepeviridae isolate HESQL194, complete genome +--------------------------------------------------------------ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccatcgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggtccggccgtttttatcccgtgttcaaactgacatcct +tattaacttgatgcaacctcgacagcttgtgttccggcccgaagtcctctggaatcatccgatccagcgagt +tatacataatgagctggagcaata---ctgccgagccc-gcgctggccgctgtcttgaagtgggcgcccacc +caagatctattaatgataaccctaatgttctgcaccggtgctttctccgcccggttggaagagacgtccagc +gctggtattccgcccccacccgtggcccagcggctaactgccgccgttctgcgctacgcggcttgccccccg +ccgaccgcacatattgcttcgacgggttctcccgctgcgcctttgccgctgagaccgggatcgctttatact +cactgcatgacctttggccttcggatgttgcggaggctatggctcgtcacgggatgacgcgtttgtatgctg +ccctccaccta-ccccctgaagttctgttaccacctggaacttaccacacaacctcctatcttctgattcac +gacggcaatcgcgccgtcgtgacttatgaaggggatactagtgcgggctataaccacgatgtgtctatactt +cgtgcatggatccgtaccactaaaatagttggtgatcatccgctggtaatagagagggtccgcgccatcggc +tgccattttgtcttactccttactgcagcccccgagccgtctccaatgccttatgtcccgtaccctcgttca +acagaggtgtacgttagatccatatttggtcctggt---------gggtcaccctctcttttcccatcagcc +t----------gctctaccaagtcta-cattccatgccgttccggtccatatctgggaccggcttatgcttt +ttggtgccaccttagatgaccaggctttttgctgctcgcggcttatgacctacctccgcgggattagctata +aagtgaccgttggtgcacttgtcgccaacgaaggctggaatgcctcggaggatgcactaaccgctgtgatta +ctgcagcgtacctgactatttgtcatcagcgctacctacgaacacaggctatctctaaaggcatgcgccggc +tagaggttgagcacgcccagaagtttatcacaaggctatatagctggttgtttgagaagtc---------ag +gccgtgattacatccctggtcgccagctccaattttatgcgcagtgccgccgctggctctcggctggctttc +atctggaccctagggttctcgtctttgatgaggcggttccctgc---cgatgccggagcttcctaaagaa-- +----agttgccggaaaattttgttgctttatgaagtggctggggcagga------gtgtacttgctttttgg +----------------agccggcggaaggcctggttggtgactgtggc--------catgataacgaggcct +atgaggggtctgaggtggaccccgccgagcccgctcaccttgatgtctctgggacttatgcagtccacggtc +gccagcttgaggctctatatagagcgcttaatatcccagatgacattgcagcccgtgcatcacgtctaacgg +ctaccgtggagcttgccgccagcccaggcagacttgaatgccgtacagtgctcgggaataagattttccgta +catcaataactgatggtgcccatctcgaggccaatggtcc------------------------tgagcagt +acgtcctgacatttgatgattctcgccaagcgatgggggctgggcctcatagcctcacgtatgaacttgtcc +ccgccggtctgcaggttaaaatatcttct-------aatggcctggattgtaccgccgtattcccc---cct +ggtggggcgccaagcgctgcaccaggtgaagtggcggctttctgtagcgccctatacaggtacaataggttc +acccagcgccattcgctgactggcgggctgtggctgcaccccgaggggcttcttggcctgttcccccctttc +tccccggggcatctttgggagtctgcaaaccctttttgcggtgagagcacactttacacacgaacctggtcc +acatctggattttctagcgacttctccccacccgaggcggcttatgccgccccagcccctaacat----ggg +gctaaccccgggtaccccctcctctgctagcgatat-----------------ctgggtttt---------- +---------tccaccacct----tctgagaagt--------------cggcggtcatttcgccacccataac +cccggtcggtaagccaactaa---------------------------------------tccacc------ +------------------------------------------------------------------------ +-tggtcatac-------------------------------------------------------------- +-------------tacacct----aggccacccgtccgtgggcttcctacatcaccgtcggccctaacccca +g---------------------------------------------ctagtaagccagctaacccgcctagc +cttactgtacctagg-------------------------------------ccccccgtccgcgagccgtc +cacaccgcc--------------------------------------atcggctcgcactcgccggc----- +-------------------ttctctatacatatcctgatggggccaaggtgtatgcaggctctttgtttgag +tcagattgttactggctggttaatgcatctaaccctggccaccgtcctggtggtggtctctgccatgcattc +taccagcgctttccagagtcct------tccatccgactgattttgttatgcgcgaggg---gctcgccgca +tatactttgagcccgcgtccgatcattcatgctgtggcccctgactatagggttgagcagaaccccaagagg +ctggaggcggcatatcgtgagacctgctcccgcctcggcacagctgcctaccctttattggggtcagggatt +taccaggtccctgtaggtctaagttttgacgcctgggagcgtaatcaccgcccaggcgatgaactctacctt +actgagccagcagccgcc-------------------------------------------------tggtt +cgaggctaataagcctaccca--------------------------------------------------- +------------------------------------------gccagccctaacaatcactgaagacaccgc +cc------------gcacagccaaccttgcgcttgagatcg------------actccgctactgaggtcgg +tcgtgcctgc---gctggttgcactatcaaccccgggattgttcactaccagttcaccgccggggtccctgg +ctccgggaagtctaggtctatacagcagggggatgttgatgttgtggtcgttccgactcgcgagcttcgcaa +tagttggcggcgccgcggctttgctgcttttacgcctcacacggcagctcgtgtcactgccggccggcgcgt +ggtgatagacgaagcaccttcgcttccaccgcacctgctgttgctccatatgcagcgagcctcatcagtcca +tcttcttggcgaccccaatcaaatccctgccattgactttgagcacgccggtttggtcccggcgattcgccc +tgagctagcccctactagttggtggcatgtcacccaccgctgccccgccgatgtatgtgagctcatacgcgg +ggcctacccaaagattcagacgaccagccgtgtgatgagatctttattttggaatgag------cctgcgat +aggtcagaagctggtttttacgcaggcagccaaggccgccaatcccggcgcaattactgttcacgaggccca +gggggccacgttcactgagactactatcatagccacggccgatgctagaggtcttattcaatcttcccgcgc +acacgccatcgttgcacttacccgccatacagaaaagtgcgttattctcgacgctcctggcctattgcgtga +ggttggtatttctgatataattgtaaataacttt------------------------------ttcctggc +tggtg--gtgaagtgggccaccatcgcccctctaccatcccccgcggcaacccagaccagaacttagatac- +-----cctccaagcgttccctccgtcctgccaaatcagcgcttaccaccagttggctgaggagctgggccac +cggccggccccagtggccgccgttctgcccccctgccctgagcttgagcaggggttactctacatgccgcag +gagcttacggtgtccgatagtgtcctaatctttgaactcacggacatagttcactgtcgtatggccgcccct +agtcaacgtaaggcggttctctctacgctcgtcggcaggtacggccgccgaacgaagctgtatgaagcggcc +cactctgatgtccgtgagtctttagggaggttcatccctactatcggaccagtccaggccaccacatgtgag +ctatatgaactggttgaggccatggtggagaagggccaggacggttccgctgtgcttgaacttgatctctgc +aaccgtgacgtctcacgtattacattctttcagaaggattgtaacaaatttacaacaggtgagactattgcc +catggtaaggtgggccaggggatttcggcttggagtaaaaccttttgtgctttatttggcccatggttccgt +gccattgagaaggagattctggctctgctcccacctaacattttctatggtgatgcctatgaggagtcagtg +ttctctgcggctatttctggggctggctccagtatg---gtttttgagaatgatttttctgagtttgatagc +acccaaaataatttctctct------------------tggccttgagtgcgttataatggaggagtgtggc +atgccccaatggcttatacgactgtaccatctagttagatcagcctggattctgcaagccccgaaagagtct +ttgaaaggcttctggaagaagcattccggcgagcctggcactctcctttggaataccgtctggaacatggcg +atcatagcacactgctatgaattccgtgacctgagagtggcagcgtttaagggggatgattctgtggttctt +tgcagtgattaccgtcagagccgtaatgcggctattctgatagccggttgtgggttaaaactgaaggttgat +tatcggcctattggtttgtatgccggcgttgtagtggctccgggcctcggggcacttcctgatgttgtccgt +tttgcaggccgattatctgagaagaactggggtccgggccccgagcgcgccgaacagttgcgcctagcagtt +tgtgattttcttcgagggctgacgaatgttgcacaggtttgtgttgatgttgtgtcccgtg-------ttta +cggggttagccccgggctggtgcataaccttattggcatgctacagactattgccgatggaaaggcccattt +tactgagactgttaagcccgtgctggatcttacaaactccatcatacagaggttagaatgaataacatgtt- +c----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaacccggggctggaactcgtccta +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgtcccccgtcgtcgatctacccca---------actggggctgcgccgttaac +tgctgtctcaccagcgcctgatacggccccagtccctgatgttgattctcgtggtgctatcttgcgccgtca +gtataatttgtccacctctcctttaacttcttctgttgcctctggaactaatcttgtcttgtatgctgcccc +gcttaaccctcttctgcctcttcaggacggcaccaacactcacatcatggcgactgaggcgtctaattacgc +tcagtaccgggttgtccgggctacaatccgctaccgccccttggtgccgaatgccgtcggtggttatgcaat +ttctatttccttctggcctcagactacaactacacccacctctgttgacatgaattccatcacttctactga +tgttaggattttagtccagcctggcatagcctctgagttggtcatcccgagtgagcgccttcactatcgtaa +tcaaggctggcgctctgtagagacatcgggtgtagccgaggaggaggcgacatcaggtttggtcatgctttg +tatccatggctcccctgtcaattcttataccaacacgccctatactggggcactggggctccttgatttcgc +acttgagcttgaatttaggaatttgacccctgggaacactaacacccgtgtgtcccgttacactagtacagc +tcggcaccgcctgcgtcgtggtgccgatgggacagccgagcttacaaccactgcagccacacgttttatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggtgaggtgggccgtggtatagccctaacgctatt +caatcttgctgatacacttctcggtgggctgccgacagaattgatttcgtcggctggaggccaactgtttta +ctcccgcccggttgtctcagccaatggcgagccaactgttaagttatacacctctgtcgagaatgcacagca +ggataagggtattgctataccacacgatatagatttaggggattcccgtgtggttatacaagattatgacaa +ccaacatgaacaggaccggcctaccccgtcgccggccccatcccgtcccttctcggtccttcgagccaatga +tgtcttgtggctctc-----------------------------tctgactgcagctgaatatgac------ +cagactacttatggctcgtcaaccaatcctatgtatgtttcagatactgtcacatttgt---taatgtggcg +acaggtgcccaggctgttgcccggtcccttgattggtccaaggtcactttggacggccggccacttactacc +at-----ccagcagtattccaagacattttatgtgc-tgccacttcgtggcaagctttccttctgggaagct +ggcacgaccaag--gctggctatccttacaattacaacaccactgctagtgaccagattctgattgagaatg +cagccggccac------cgtgttgctat-atctacttacactactaatcttgg--------------cgccg +gtcctgtgtctatttc-tgcagtcggcgttcttgctccgcactctgctttagctgtgctcgaagatactatt +gact---------accccgcccgtg----cccatactttcgatgatttctgccctgagtgccgtaacc---t +cggcctacagggctgtgctttccaatc--------cactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaattt----cc-t-c--ctt------gt +gccc-cct--------tc-taa-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355242.1/17324/1-7324 |Hepeviridae isolate HESQL073, complete genome +------------------------------------------g-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggttcggccgtttttatctcgtgttcaaactgatatcct +tattaacttgatgcaaccccgacagcttgtgttccggcccgaagtcctctggaatcatccgatccaacgagt +catacataatgaactggagcaata---ctgtcgagccc-gcgccggccgctgtcttgaggtgggcgctcatc +cgagatctattaatgacaaccccaatgttttgcaccggtgctttcttcgcccagttggtagagatgtccagc +gctggtactccgctcctactcgtggtccggcggctaattgtcgtcgttctgcactacgcggattaccccctg +tcgatcgcacatattgcttcgacggattctcccgctgcgccttcgccgctgagaccgggatcgctttatatt +cattgcatgacctttggccctcggatgtcgcggaggccatggctcgccatgggatgacgcgtttgtatgctg +ccctccactta-ccccctgaggttctgctaccacccggcacttaccacacaacatcttatcttctgattcac +gacggcaaccgtgccgtcgtgacatacgagggggatactagtgcgggttataatcacgatgtgtcgatactc +cgtgcatggattcgcactactaagatagttggtgatcacccgctggtaatagagagggtccgcgccattggc +tgccattttgttttactccttactgcagcccccgagccatccccgatgccttatgtcccgtaccctcgctca +acagaggtgtatgttaggtctatatttggccctggc---------gggtcgccttctcttttcccatcagcc +t----------gttctaccaagtcta-catttcacgctgtcccggtccatatctgggatcggctcatgcttt +ttggcgccaccttagacgatcaggccttctgctgctcgcggcttatgacctatctccgcgggatcagctaca +aagtgaccgttggcgcacttgttgccaacgagggctggaatgcctcggaggacgcgctaaccgctgtgatta +ctgcagcgtacttgactatctgccaccagcgctacctacgaacacaagccatttccaaaggcatgcgccggc +tagaggttgagcacgcccaaaaatttatcacaaggctttatagctggctatttgaaaaatc---------gg +gccgtgactatattcctggccgtcagctccagttctatgcgcagtgccgccgttggctctcggctggcttcc +atctggaccctagagttctcgtctttgacgaggcagtcccctgc---cgctgtcggagcttcttaaagaa-- +----ggccgccggaaagttttgctgttttatgaaatggttggggcagga------gtgcacctgttttttgg +----------------agccagcggaaggcctggttggtgactgtggc--------catgataacgaggcct +atgaaggatctgaggtggaccccgccgagcccgctcatcttgatgtatccgggacttatgcggttcatggcc +gccagcttgaggccctatatagggcgcttaacattccagatgacatcgcagctcgtgcatcacgtctgacgg +ctaccgtggaacttgccgccggcccaggcagactcgagtgccgtacggtgcttgggaataaggtttttcgta +catcaataaccgacggcgcccatctcgaggccaacggtcc------------------------cgagcagt +acgtcttgacatttgatgattctcgccaggcgatgggggctgggcctcatagcctcacgtatgaacttgtcc +ctgctggtctgcaggttaaagtatcttcc-------aatggcttggattgtaccgctatatttccc---cca +ggtggggcgccaagcgctgcaccgggcgaagtggcggctttctgtagcgccctatacaggtataataggttc +acccaacgccattcgctgaccggagggctgtggctgcaccctgaggggctccttggcctgttcccccctttt +tccccgggccatctttgggagtctgcaaaccccttttgtggcgagagcacactctatacacgaacttggtcc +acttctggtttttctagtaacttctccccacctgaggcggcctacgccaccccagcccctgatat----ggg +gttaccctcgggtgcctccccctctgctagtgatat-----------------ctgggtgtt---------- +---------tccaccgccc----tctgaggggt--------------cggtggccacccctcctcccttaac +cctggtcagtaagccaactaa---------------------------------------ctcgtt------ +------------------------------------------------------------------------ +-tagtcttgc-------------------------------------------------------------- +-------------tacacct----cggcccctcgcctgtgagccacctacatcgccaccggccctaaccccg +g---------------------------------------------ccagtaggccagctaacctgcctagc +ccagttacacccagg-------------------------------------ctctccgcccgcgagctgcc +cacgctgcc--------------------------------------accagcccgcactcgccggc----- +-------------------tcctctatacatatcctgatggggccaaggtgtatgcaggctccttgtttgag +tcagattgtgactggctggtaaatgcatctaaccctggccaccgccctggtggtggactctgtcacgcattc +taccagcgcttcccggagtcgt------tccatcctactgattttgtcatgcgtgaagg---tctcgccgca +tatactctcagcccgcgtccgatcatccatgctgtggcccccgactacagggttgagcagaaccccaagaga +ctagaggcagcatatcgtgagacctgctcccgccttggcacagcagcttacccactactggggtcggggatt +taccaggtccctgtgggtttaagcttcgacgcctgggagcgtaatcaccgcccaggcgatgaactttacctt +acagagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacaccgc +cc------------gcacagctaacctcgcgctcgagattg------------actccgctactgatgtggg +tcgtgcttgc---gccggctgcactattaaccccgggattgtccactatcagttcaccgccggggttcctgg +ctccgggaagtctaggtctatacagcaaggggatgttgatgtcgtggttgtgccaactcgtgagcttcgtaa +cagttggcgacgccgcggctttgctgcctttacacctcacacagcagctcgtgtcactgccggccggcgtgt +ggtgatagatgaggcaccatcgctcccaccgcacctgctgttgctccatatgcagcgagcctcatcggtcca +tcttcttggcgaccccaaccagatccccgccatcgactttgagcacgccggcttggtcccggctattcgccc +tgagctagcccctaccagttggtggcatgtcactcaccgttgccccgccgatgtgtgtgagcttatacgcgg +ggcctacccaaagattcagactaccagtcgtgtgttgagatccctattttggaatgag------cctgcagt +aggtcagaggttggtttttacgcaggcagccaaggcggccaatcccggcgcaattaccgttcatgaggccca +aggcgccacgtttactgagactaccattatagccacagccgatgctagaggtcttatccaatcttcccgtgc +acatgccatcgttgcgcttactcgccatacagaaaagtgtgtcattcttgacgctcctggcctactgcgtga +ggttggcatttctgatataatcgttaataatttt------------------------------ttcctggc +cggtg--gcgaagtgggccaccatcgcccttccactataccccgcggcaatcctgaccgtaacctggacac- +-----tcttcaagcattccctccgtcctgccagatcagcgcctaccaccagttggccgaggagctaggccat +cgaccggccccagtggccgccgtcctgcccccctgccctgagcttgagcaggggttactctacatgccgcag +gagctcacggtgtccgatagtgtcttaattttcgaacttacggacatagttcactgccgcatggctgccccc +agccaacgcaaggcagtcctttccacgcttgtcggcaggtacggccgccggacgaaactgtacgaagcagcc +cattctgatgttcgcgaatccttggggaggtttattcctaatatcggaccggtccaggccaccacgtgcgag +ctgtatgagcttgttgaggctatggtggagaagggccaggacggctccgccgtgcttgagcttgatctttgc +aaccgtgatgtctcgcgtattacgtttttccagaaggattgtaacaaatttacaacaggtgagaccattgct +cacggtaaggtaggccagggtatctcagcttggagtaagaccttttgtgctctattcggcccgtggtttcga +gccattgagaaggagattctggcgctactcccacccaatattttctatggtgacgcctatgaggaatcagtg +ttttctgcagctatttctggggctggctccagtatg---gtttttgagaatgatttttccgagtttgatagc +acccaaaacaacttttctct------------------cggccttgaatgcgttattatggaggagtgtggc +atgccccagtggcttatccgactgtaccatttagttagatcagtctggattctgcaggccccgaaagagtcc +ttgaaaggtttctggaagaagcactccggcgaacctggcaccctcctttggaacaccgtctggaacatggcg +atcatagcacactgctatgagttccgtgacttgagagtggcggcgtttaaaggggatgactcggtggttctt +tgcagcgactaccgtcagagccccaatgcggccaccctgatagccggttgtgggttgaaactgaaggttgat +taccggcctataggtttgtatgccggcattgtagtggccccgggcctcggtgcactccccgatgtcgtccga +tttgcaggtcgattatctgagaagaactggggcccgggccctgagcgcgccgagcagttgcgcctagcagtt +tgtgatttccttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggcttgtgcataaccttattggcatgctacagactattgctgatggaaaggcccattt +tactgagactgtcaagcccgtgttggatctcacaaattctatcatacagaggttggaatgaataacatgtt- +c----------------tgtgcaccgcccatggg------------atcgccatgcgccctagggctgttct +gctgctgttcctcgtgtttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgcgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccaccgacgtcgtatcacaatccggggctggagctcgccctc +gacagccggcccg---------------cccccttggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgccgccccccgccgtcgatctacccca---------actggggctgcgccgctaac +tgctgtttcaccagcgcctgatacggccccagtccctgatgttgactctcgtggcgctatcctgcgccgtca +gtataatctgtctacctcccctttaacctcatctgttgcttctgggactaatcttgtcttgtatgctgcccc +gcttaatcctcttctgcctctccaggacggcaccaatactcacatcatggcgactgaagcatctaactacgc +tcagtaccgggttgtccgggctacaatccgttatcgccctttggtgccgaatgccgtcggtggttatgcaat +ttctatttctttctggcctcagactacaactacacccacctctgttgatatgaattccattacctcaactga +tgttaggattttagtccagcctggcatagcctccgagctggtcatcccgagtgagcgcctccactatcgtaa +tcagggttggcgctccgttgagacatcgggtgtggccgaggaggaggcgacatcaggcttggtcatgctttg +tattcatggatctcctgttaattcctataccaatacgccctatactggggcattggggctcctcgactttgc +actcgagcttgagtttagaaacctgacccctgggaacactaatacccgtgtatcccgttacactagtacagc +ccggcaccgtttgcgccgtggtgccgatgggacagctgagcttacaactactgcagccacacgttttatgaa +ggatctccatttca---ccgggacaaat---ggtgttggtgaggtgggccgtggtatcgccttaacgctatt +taatcttgctgatacacttctcggtgggctgccgacagaattgatttcgtcggctggaggtcaattgtttta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagctttacacctctgtcgagaatgcacagca +ggacaagggtattgccataccacacgatatagacctaggggactcccgtgtggttatacaagactatgacaa +ccaacacgaacaagatagacctaccccgtcaccggccccatcccgtcccttttcagtccttcgagctaatga +tgttttgtggctctc-----------------------------tctgaccgcagccgaatacgac------ +cagactacttatggctcgtctactaaccccatgtatgtgtcagatactgttacatttgt---taatgtggcg +acgggtgcccaggccgttgcccgatccctagattggtctaaggtcactttggatggccggccacttactacc +at-----ccagcagtactccaagacattttatgtgc-tgccgcttcgtggcaagctttccttttgggaagct +ggtacgaccaag--gccggctacccttacaattataataccactgctagtgaccagattttgattgagaatg +cagccggtcac------cgtgttgctat-atctacttatactacaagtcttgg--------------cgccg +gccctgtgtctgtttc-tgcggtcggcgttcttgctccgcattctgctttagctgtgctagaagacactatt +gact---------accccgcccgtg----ctcatacttttgatgatttctgccctgagtgccgcaacc---t +cggcctgcagggctgtgctttccaatc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-tcc--ttt------gt +gccc-cct--------tc-taaa-tt-tt----gt-tt-tgtat-------------aattt-c-------t +atttttct----gcg---------------gttccccgccccgaa---------------------aaaaaa +aaaaaa----------------aaaaaa-------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355243.1/17194/1-7194 |Hepeviridae isolate HESQL013, complete genome +------------------------------------------g-------------t-----ggtcgatgc- +---catggaggcccaccagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggctaactccgccttggcgaatgctgtggtggtccggccgttcctatcccgtattcagaccgatatcct +tattaatctgatgcaaccccggcagctcgttttccggcctgaagtcttctggaatcacccaattcagcgagt +catacataatgagttggagcaata---ctgccgggccc-gtgccggccgctgcctagaggtgggcgctcacc +cgaggtccatcaatgacaatcctaatgtcctgcaccggtgctttcttcgcccggtcggcagagatgttcagc +gctggtattctgcccctactcgtggtccggcggccaattgccgtcgttctgcgcttcgcggtttgccccccg +ttgatcgcacttactgcttcgacgggttttcccgttgcgcttttgccgccgagaccgggattgctttatact +cactacatgacctctggccttcggacgttgcggaggccatggcccgtcacgggatgactcgtttgtatgctg +tcctccatcta-ccccctgaggtcctgttaccacctggtacatatcacacaacttcttatctcctgatccac +gatggtgaccgcgccgtcgtaacttatgagggggataccagtgcgggctataaccacgatgtctctatactc +cgtgcatggatccgcactacaaaaatagttggtgaccacccactagtgatagagagggtccgcgccattggc +tgccactttgttttgctcctcactgcggcccccgagccatctcctatgccttatgtcccgtaccctcgttca +acagaggtgtatgtcaggtctatatttggccctggt---------gggtcaccctctcttttcccatcagcc +t----------gctctaccaagtcta-cattccatgctgtcccggttcatatttgggaccggcttatgctct +ttggtgccaccttagatgaccaggccttttgctgctcgcggcttatgacctatctccgcgggattagctaca +aagtgaccgttggtgcacttgttgccaacgagggctggaatgcttcggaggatgcacttaccgctgttatta +ctgcagcgtatctgactatttgccatcagcgctacctccgaactcaggccatctctaaaggcatgcgccggc +tcgaggtcgagcacgcccaaaagtttatcacaaggttatacagctggctgtttgagaaatc---------ag +gccgtgattatatccccggtcgtcagcttcagttttatgcacagtgtcgccgttggctctcagctggttttc +atttagaccctagagtcctcgtttttgacgaggcggttccctgt---cgctgccgaagcttcttgaaaag-- +----ggtcgccggcaagttttgttgctttatgaaatggctggggcagga------gtgcacctgctttctgg +----------------agccggcggagggtttggttggcgactgtggc--------catgacaacgaggcct +atgagggatctgaggtggatcccgctgagcccgctcaccttgatgtttccgggacttatgcagtccacggcc +gtcagcttgaggctctatatagggcgttaaatgtcccgcatgacattgcggcccgcgcattacgtctaacag +ctactgtggagctcgtcgctagcccgggccgacttgagtgccgtacagtgcttgggaataagacctttcgta +catcaataattgatggcgcccatcttgaggtcaacggccc------------------------cgagcagt +atgtcttgacttttgatgattctcgccaagcaatgggggctggacctcacagcctcacgtatgaacttgtcc +ctgccggcctgcaggttaaaatatcttcc-------aacggcttggactgcaccgcagtattcccc---cct +ggtggggcgccatgcgctgcaccgggcgaagtggcggcgttctgcagtgccttatacaggtataacaggttc +acccaacgccattcgctgaccggtgggctgtggctgcatcctgaggggctccttggtctattcccccctttc +tcccctgggcatctttgggagtctgcaaaccccttttgcggtgagagtacactttacactcgaacttggtct +acatctggtttttctagcgacttctccccccctgaggcggctcctgccgccacaggccccgatat----ggg +gctaccacctagtaccccctcttctgctagtgatat-----------------ctgggtact---------- +---------cccgtcgctc----tctgaggggt--------------cggttatcgttccgccacccgagac +cccag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ccagtaagcctgctaacccacctagc +cctgctgcacctaag-------------------------------------ccccctgctcgtaagccgcc +tacaccacc--------------------------------------accggctcgcacccgccggc----- +-------------------tcctttatacttaccctgatggggctaaggtgtatgctggctctctgtttgat +tcagactgtgattggctggttaatgcgtccaaccccggccaccgccctggcggtggtctctgccatgcattc +taccagcgttttccggagtcat------ttcacccgaccgactttgtcatgcgtgaggg---cctcgccgca +tatactctgagcccgcgccccatcatccatgctgtggcccctgattacagggttgagcagaatccgaagagg +ctggaggcggcatatcgcgagacctgttctcgcctcggtacagctgcctacccgctgctggggtcagggatt +taccaggtccctgtcggtctgagctttgacgcctgggagcgtaatcaccgcccgggcgacgaactctacctc +accgagccagccgccgcc-------------------------------------------------tggtt +tgaagctaataagccagccca--------------------------------------------------- +------------------------------------------gccggccctaacaattactgaggacaccgc +cc------------gcacagctaacctcgcgcttgagatcg------------actcagctaccgaggtggg +ccgtgcttgc---gccggctgtactgttagccccggggttgttcattaccagttcaccgccggggtccctgg +ctctgggaagtctagatccatacagcagggggatgtcgacgttgtggttgtgccaacccgtgagcttcgcaa +cagctggcggcgccgcggcttcgccgccttcacaccccatacagcagctcgcgttactgccggccggcgtgt +tgtaatagatgaggcgccctcgctcccaccgcacttgctgctgcttcatatgcagcgagcctcatcggtcca +ccttctcggcgaccctaaccagatccccgctattgactttgagcacgccggtctggttccggcgattcgacc +tgagctcgcccccactagctggtggcatgttacccaccgttgccccgctgatgtgtgtgagctcatacgcgg +agcctacccgaagattcagaccactagtcgtgtgttgcgatccctgttctggaatgaa------cctgcggt +gggtcagaggttggtattcacacaggcagccaaggcggccaaccccggtgcaatcaccgttcatgaggccca +gggtgccacgtttacagagactactattatagctacggccgatgctagaggccttattcaatcctctcgtgc +acatgccatcgttgcacttacccgccatacggaaaaatgtgtcatccttgacgcccctggcctattgcgtga +ggttggcatttcagatatcattgtcaacaacttt------------------------------ttcctcgc +tgggg--gtgaggtgggccaccaccgcccctctaccatacctcgcggtaacccagaccggaacttagacac- +-----cctgcaagcattccctccttcctgtcaaattagtgcctatcatcagttggctgaggagctgggccac +cggccggccccagtggccgctgtcttgcctccctgccccgagcttgaacagggcctactttacatgccacag +gagcttacagtgtctgatagtgtcctagtttttgaactcacggacatagtccactgccgtatggctgccccc +agccagcgtaaggcggttctttcgacactcgtcggtagatacggccgtcgaacgaagctgtatgaagcagcc +cactctgacgtccgtgagtccttagggagatttattcctactatcggaccagtccaggccactacgtgtgag +ctgtatgagttagttgaggctatggtggagaagggccaggacggctccgctgtgcttgagctcgacctctgt +agccgcgatgtctcgcgtatcacattcttccagaaggattgtaacaagtttacaacaggtgagaccattgct +catggcaaggtgggccagggcatctcagcttggagcaaaaccttttgtgccctatttggcccgtggtttcgt +gccatcgagaaggagattctggctttgctcccgcctaacattttctacggcgatgcctatgaggagtcagtg +ttttctgcagccatttctggagccggctccagtatg---gtttttgaaaatgatttttctgaattcgatagt +acccaaaataacttttctct------------------tggccttgagtgtgttattatggaggagtgtggt +atgccccaatggcttattcgattgtaccatctggttagatcagcctggactctgcaggccccgaaagagtct +ttgaaaggtttttggaagaagcattccggcgagcctggcactctcctttggaacaccgtctggaacatggca +atcatagcacactgctatgaatttcgtgacttgagagtggcagcgtttaaaggggatgattcagtagtcctt +tgtagtgactaccgtcagagccgcaatgcggccaccttgatagccggctgtgggttgaaactgaaggttgac +tatcgccctataggtttgtatgccggcgttgtagtggctccgggccttggggcgcttcccgacgtcgtccgg +tttgccggtcgactgtccgagaagaactggggcccgggccctgaacgcgccgaacagttacgcctagcagtt +tgtgacttcctccgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccctggattggtacataaccttattggcatgctacagactattgctgacggaaaggcccattt +tactgagaccgtcaagcctgtattggatctgacaaattctattatacagaggttagaatgaataacatgtc- +t----------------tgtgcatcgcccatggg------------atcgtcatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccga------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgccgacgttgtaccacaacccggggctggagctcgtcctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------gctggggctgcgccgttaac +tgctgtttcaccagcgcctgatacagccccagttcctgatgttgactctcgtggcgctattttgcgccgcca +gtacaatttgtccacctctcccctgacctcgtctgttgcttctggaactaaccttgtcttgtatgccgcccc +gctcaaccctctcctgcccctccaagacggtaccaatactcacattatggcgaccgaggcgtccaattacgc +ccagtaccgagttgttcgggctacaattcgttaccgccctttggtgccgaatgccgttggtggttatgcaat +atctatttccttctggccccagaccaccactacacctacctctgttgatatgaattctattacttctactga +tgttaggatattggttcagcccggtatagcttctgagctggttatcccgagcgagcgcctgcactaccgtaa +ccagggttggcgctctgttgagacctcgggtgtggccgaggaggaggcgacatcgggcctagttatgctttg +tattcatggctcccctgttaactcctatactaacacgccctacactggtgcactggggcttcttgattttgc +actcgagcttgaatttagaaatttgacccccgggaacactaacacccgtgtgtcccgttacaccagcactgc +ccgacaccgcctgcgtcgcggcgccgatgggacggccgagcttaccaccactgcagctacacgctttatgaa +ggacctgcacttta---ccgggacgaat---ggcgtcggcgaagtgggccgtggtatagccctcactttatt +caatcttgctgacacacttctcggcgggctaccgacagaattgatttcgtcggctggaggccaactatttta +ctcccgtccggttgtctcagccaatggcgagccgactgtaaagttatacacctccgtcgagaatgcgcagca +ggacaagggtattgctataccacatgatatagacttaggcgattcccgtgtggtcattcaagattatgataa +ccaacatgaacaggaccggcctaccccgtcaccggccccgtcccgccccttctcggtcctccgtgccaatga +cgtcctatggctctc-----------------------------tttgactgcagccgagtatgat------ +cagaccacttacggctcgtcgactaaccctatgtatgtttcagatactgtcacacttgt---gaatgtggct +acgggtgctcaggctgttgcccgctctcttgattggtccaaggttaccttagacggccggcctcttactacc +at-----tcagcagtattctaagacattctatgtgc-tgccgcttcgtggcaagctctccttttgggaggct +ggcacgactaag--gccggctatccttataattacaatactaccgccagcgaccagattttgattgagaatg +cagccggtcac------cgtgttgctat-atccacttacactaccagtcttgg--------------cgctg +gccctgtgtcagtttc-cgcagttggcgtcctcgccccacattctgctttagctgtgcttgaagatactatt +gact---------accctgctcgcg----ctcatacttttgatgatttctgccctgagtgtcgtaacc---t +cggcctacagggttgtgcttttcagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa--t----tt-cct--ttt------gt +gccc-cct--------tc-tgag-ct-tt----ac-ct-tgt----------------tatt-t-------c +tcttt------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355244.1/17176/1-7176 |Hepeviridae isolate HESQL125, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatcccgtgttcaaactgacattct +tattaatctaatgcaaccccggcagctcgtgttccgacctgaggtcctttggaatcatcctatccagcgagt +tattcataatgagctggagcaata---ctgccgagccc-gcgccggccgctgtctcgaggtgggcgcccacc +caagatccattaatgacaaccccaatgttctgcaccggtgctttctccgcccggttgggagagatgttcagc +gctggtattcagcccctactcgcggtccagcggccaattgccgccgctctgcgctacgtggtttgccccctg +tcgaccgcacatactgcttcgacgggttctcccgctgcgcctttgccgctgagaccgggattgctttatact +cactgcatgacctctggccctcggatgttgcggaggctatggctcgccatgggatgacgcgcttgtatgccg +ccctccaccta-ccccccgaggttctgttgccacctggcacttaccatacaacctcctatcttctgattcac +gatggcaaccgcgcagtcgtgacttatgagggggatactagtgcaggctacaaccatgatgtatctatactt +cgtgcatggatccgcaccactaaaatagtcggcgaccacccattggtcatcgagagggtccgcgccatcggc +tgccactttgttttgctcctcactgcagcccccgagccatccccaatgccttatgttccgtaccctcgctca +acggaggtgtatgttagatccatatttggccccggt---------gggtcgccctctcttttcccatcagct +t----------gctctaccaaatcta-cattccatgctgttccggttcacatttgggaccggctcatgcttt +ttggcgccaccttggatgatcaggccttctgctgctcgcggcttatgacctacctccgtgggattagctata +aagtgaccgtcggcgcacttgtcgccaacgagggctggaatgcctcggaggatgcgcttaccgctgtgatca +ccgcagcgtatttgactatctgccatcagcgctacttacgaacacaggccatctccaagggcatgcgccggc +tagaagttgagcatgcccaaaagtttattacaaggctatatagctggctgtttgaaaagtc---------ag +gccgtgactacatccccggccgccagctacagttttatgcacaatgccgccgctggctctcagctggtttcc +atctggaccctagagttcttgtttttgacgaggcggtcccctgc---cgctgccggagcttcttaaagaa-- +----ggctgccggaaaattctgttgtttcatgaagtggttggggcagga------gtgcacctgcttcctgg +----------------agccggcggaaggcctggttggtgactgtggc--------catgataacgaggctt +atgaaggatctgaggtggaccccgccgagcccgctcatcttgatgtttctgggacttatgcagtccatggcc +gtcagcttgaggctctatatagagcgcttaacatcccagatgacattgcggctcgtgcatcccgcctgacgg +ctactgtggaacttgccgccagcccaggccggcttgagtgccgtacggtgcttgggaacaagacttttcgta +cttcaataactgatggcgcccaccttgaagctaacggccc------------------------cgaacagt +atgttttgacatttgatgattctcgccaggcaatgggggctgggcctcacagcctcacgtacgaacttgttc +ctgccggtctgcaggttaaaatatcttct-------aatggcctggattgcaccgccatattcccc---cct +ggcggggcgccaagtgctgcaccaggtgaagtagcggctttctgcagcgccctgtacaggtacaacaggttc +acccagcgtcattcgttgaccggtgggctgtggctgcaccctgaggggctccttggtctgttcccccctttc +tccccagggcatctctgggagtccgcaaaccccttttgcggtgaaagcacactttacacacggacttggtct +acatctggtttctctagcgacttctccccgcccgaggcggcttatgccgctccggtccctgatgt----agg +gctaccctcgggcgccccctcgtctgctagtgacgt-----------------ctgggtgtt---------- +---------cccaccacct----tctgaggggt--------------cggtgatcgctccgccgcccgatac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagcaagccagctaacctgcctagg +cctaccacacctagg-------------------------------------ccccccgttcgtaagccgcc +tacaccacc--------------------------------------accagcccgcactcgccggc----- +-------------------tcctctatacatatcctgatggggccaaggtgtatgcaggctctctgtttgaa +tcggattgtgaatggctggttaatgcatctaaccctggccaccgccctggtggtggtctctgccatgcattt +taccagcgtttcccggagtcgt------tccatccgactgacttcgtcatgcgtgaggg---tctagccgca +tacactttgagtccgcgtccgattattcatgctgtggcccccgactacagggttgagcaaaaccccaagagg +ctagaggcggcgtatcgtgagacctgctcccgccttggtacagctgcctacccgctactggggtcggggatt +taccaggtgcctgtaagcttaagctttgacgcctgggagcgtaaccaccgcccaggcgatgaactctacctc +actgagccagcagccgcc-------------------------------------------------tggtt +tgaggctaataagccagccca--------------------------------------------------- +------------------------------------------gccggccctaacaattactgaagacaccgc +cc------------gcacagccaaccttgcgcttgagattg------------actccgcaactgaggtggg +tcgtgcttgc---gccggctgcaccattaaccccggggttgtccactaccagttcactgccggggttcctgg +ctccgggaagtctaggtctatacagcagggggacgttgatgttgtggttgttccaacccgtgagcttcgtaa +tagttggcggcgccgcggttttgctgctttcacaccccatacggcagctcgtgttactgccggccggcgcgt +ggtgatagatgaggcaccttcgcttccaccgcacttgttattgctccacatgcagagggcctcatcggtcca +tcttcttggtgaccccaaccagatccctgctattgatttcgagcatgctggtttagttccagcgatccgccc +tgagcttgcccctactagctggtggcatgtcacccatcgctgccccgccgatgtctgtgagctcatacgcgg +ggcttacccaaagattcagacgaccagccgtgtattgcgatccttattctggaatgaa------cctgcggt +gggtcagaagctggttttcacgcaggcagccaaggcggccaaccctggtgcaattaccgttcacgaagccca +gggtgccacgtttactgagactactattatagccacggccgatgctcgaggtcttatccaatcttcccgtgc +acatgccatcgttgcacttactcgccatacagaaaaatgcgtcattctcgacgctcctggcctactgcgcga +ggtaggcatctctgatataattgttaataacttc------------------------------ttcctggc +tggtg--gtgaggtgggccaccatcgcccttctattatacctcgcggtaacccagaccagaacctagacac- +-----cctacgagcattccctccgtcctgccaaattagtgcctaccaccagctagctgaggagctaggccac +cggccggccccagtagccgctgtcctgcccccctgccctgagctcgagcaggggctactttatatgccgcag +gagctcacggtttctgatagcgtcctaatttttgaactcacggatatagtccactgccgtatggctgccccc +agtcaacgtaaggcggtcctctcgacgctcgtcggtaggtacggccgccgaacaaagctgtatgaagcagcc +cactctgacgttcgcgagtctttagggaggttcatcccaactatcggaccggtccaggccaccacgtgcgag +ctatatgagctggttgaggctatggtggagaagggccaagacggctccgccgtgctcgagcttgacctctgc +agccgtgatgtctcgcgtattacatttttccagaaggattgtaataaatttacaacaggtgagaccattgcc +catggtaaggtgggccagggcatttcggcttggagcaagaccttttgtgctttatttggcccgtggttccgt +gccattgagaaagagatcctggctctgctcccacctaacatcttttatggtgatgcttatgaggagtcagtg +ttttctgcagctatttctggggctggctccagtatg---gttttcgagaatgatttttctgagtttgacagc +acccaaaacaatttctctct------------------tggcctagaatgcgttattatggaggagtgtggc +atgccccagtggcttatccgactgtaccatttagttaggtcagcctggaccctgcaagccccgaaagagtca +ttgaaaggtttttggaagaagcattctggtgagcctggcactctcctttggaacaccgtttggaacatggcg +atcatagcacactgctatgagttccgtgatctgagagtggcagcatttaaaggggacgattcagtggttctt +tgcagtgattatcgccagagccgcaatgcagccacccttatagccggttgcgggttgaaattaaaggttgat +tatcggcctatagggttgtatgccggtgttgtggtggctccgggccttggggcgcttcctgatgttgtccgg +tttgccggtcgactatctgagaagaattggggtccgggccccgagcgcgccgaacagttgcgtctggcagtt +tgtgatttccttcgagggttaacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggtcagccccggactggtgcataaccttattggcatgctacagactattgccgatggaaaggcccattt +tactgagactgtcaagcccgtactagatcttacaaattctatcatacagaggttggaatgaataacatgtc- +t----------------tgtgcatcgcccatggg------------atcgccatgtgccctagggctgtttt +gttgctgttcctcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtatcacaacccggggctggagctcgccctc +gacaaccggcccg---------------tcccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctacccca---------accggggctgcgccgctgac +tgctgtttcaccagcgcctgatacggccccagttcccgacgttgactctcgtggcgctatcttgcgccgtca +gtataatctgtccacttctcccttaacttcatctgttgcttctgggactaatcttgtcttatatgctgctcc +gcttaatcctctcctgcctctccaagacggcaccaatacccacatcatggcgactgaggcgtctaattacgc +tcagtaccgggttgtccgggctacaatccgctatcgccctttggtgccgaacgccgttggcggttatgcaat +ttctatttccttttggcctcagaccacaactacacccacctccgttgatatgaattccattacttcaactga +tgttaggattttagtccagcctggcatagcctctgaactggtcatcccgagtgagcgccttcactaccgtaa +tcagggttggcgttctgttgagacatcgggtgtggccgaggaggaggcgacatcaggcttggtcatgctttg +cattcatggttcccctgttaattcctacaccaacacgccctatactggggcgctggggctccttgactttgc +acttgagctagaatttagaaatctgacccctgggaacactaacacccgtgtgtcccgttatactagcacagc +ccgacaccgtttgcgccgtggtgctgatggcaccgccgagctcacaaccactgcagccacacgttttatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggcgaggtgggccgcggtatagccttaacgctatt +caatctcgctgatacacttctcggcgggctgccgacagaattgatttcgtcggctggaggccagctgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggataagggcattgctataccgcatgacatagacttaggggattcccgcgtggttatacaagattatgacaa +ccaacatgaacaagaccggcctaccccgtcaccggccccatcccgccccttttcagtcctccgagccaatga +tgtcttgtggctttc-----------------------------tctgactgcggctgaatatgac------ +cagactacttatggctcgtcgaccaaccccatgtatgtctcagatactgtcactcttgt---taatgtggcg +acaggtgctcaggctgttgcccgttcccttgattggtctaaggtcactttggatggccgcccacttaccacc +at-----ccagcagtactctaagacgttttatgtgc-tgccacttcgcggtaaactttccttttgggaagct +ggtacgactaag--gctggttacccttacaattataatactactgctagtgatcagattttgattgagaatg +cagccggtcac------cgcgttgccat-atctacttataccactagtcttgg--------------tgccg +gccctgtgtccgtttc-cgcggtcggcgttcttgccccacattctgctttagctgtacttgaagacactatt +gact---------atcccgcccgtg----cccatacttttgatgacttctgccctgagtgtcgtaacc---t +cggcttgcagggctgcgcttttcagtc--------tactattgctgagcttcagcgcct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattta--c----tt-ccc--ttt------tg +tgcc-cct--------tc-taac-tt---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355245.1/17163/1-7163 |Hepeviridae isolate HESQL162, complete genome +--------------------------------------------------------------ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccttggcgaatgctgtggtggttcggccgtttttgtctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagttggtatttcgacctgaagtgctctggaatcatcctatccaacgggt +tatccataatgaacttgaacagta---ctgtcgggccc-gggctggtcgttgtctagaggttggggcccacc +caagatccattaatgataacccaaatgttctgcaccggtgttttctacgaccagttgggagagatgttcagc +gctggtactctgctcctacccgcggccctgcggctaactgccgccgctctgccttgcgcggcctcccccccg +ttgatcgtacctattgttttgatggattctcccgctgctcatttgccgcagaaactggggttgccctctact +ctctgcatgacctctggccggccgatgttgcggaggctatggcccggcacgggatgacacgcttgtatgctg +cactacatctc-cctcctgaagtactactaccacctggtacctaccacacaacttcataccttctgattcac +gacggtgatcgtgctgttgtgacctatgaaggtgatactagtgcaggctacaaccatgatgtctctatactt +cgtgcatggatccgcacaactaagatagtcggcgaccatccgctggtgatagagcgtgttcgggctattggt +tgccattttgtgctgctgcttactgcagcccctgagccgtcaccaatgccttatgtcccatacccccggtcg +acagaggtgtatgtccgctctatattcggccctggc---------gggtccccatccctattcccatcagct +t----------gctctacgaaatcta-catttcatgctgttccggttcatatctgggaccggcttatgcttt +ttggcgctactctggatgatcaggcgttttgctgttcacggcttatgacctacctccgcgggattagttaca +aggtcactgttggcgcccttgtcgctaatgaggggtggaatgcttcggaggacgctcttaccgctgttatta +ccgcagcgtacttgaccatctgccaccagcgttacctccgtactcaagctatatccaagggtatgcgccgac +tggaggttgagcacgcccaaaaatttattacaagactttatagttggctgttcgagaagtc---------cg +gccgtgattatatccccggccgtcagcttcagttctatgcacagtgccgccgttggttatcggcgggtttcc +atcttgacccaagggtgcttgtttttgatgagtctgtgccctgc---cgttgtaggacatttcttaagag-- +----ggctgtgggcaagttctgctgttttatgaagtggctgggacagga------gtgcacctgctttttgg +----------------aaccagcagagggtctagttggcgaccatggc--------cacgataatgaagctt +atgagggctctgaggtcgatcaggccgagcccgcccatcttgatgtttctgggacttatgccgtccacggcc +gccaacttgaggccctgtatagggcgcttaacatcccacatgacatcgctgcccgagcctcccgtttgactg +ccaccgtcgaactcgttgcgggcccagaccgcttggagtgccgcactgtgctcgggaataagactttccgga +cgacggtggttgacggcgcccatcttgaggcgaacggccc------------------------cgagcagt +acgttctttcgtttgacgcctctcgccagtctatgggggccgggccgcatagtctctcctacgagctcactc +ctgccggcttgcagatcaagatctcatct-------aatggcctggattgcactgcaacattcccc---ccg +ggcggggcccctagcgctgctccgggggaggtagcagccttttgcagcgccctttacaggtacaacaggttc +actcagcaccattcgcttgtaggtggcttgtggctgcatcctgaggggttgttgggcatcttcccccctttc +tctcccgggcacctttgggagtccgctaaccctttttgtggggagggaaccttgtacacccggacatggtca +acatctggtttttccagtgacttttccccccctgaggcagccgtggcagtgccggctgctactcc----ggg +gttatgcc---accctacaccccctgttagtgacat-----------------tcgggtgtt---------- +---------accgccacct----tctgaagaat--------------ttcaggttgatacagcgcccgctcc +ccttg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcccgctcaaccatctagc +cccgctgggccaaag-------------------------------------gctcccgtgcgtaagccgcc +aacgccacc--------------------------------------atccccgcgtacccgccgcc----- +-------------------ttctttacacctatccggatggggcaaaggtgtatgcggggtcactgtttgag +tctgattgtgattggctggttaatgcgtcgaatcccggccatcgtcctggcggcggcctttgccatgccttt +taccaacgctaccccgagtctt------tctactcaactgagttcattatgcgcgacgg---tcttgccgct +tatactttaactccccggcctattattcatgcagtggcccctgattatagggttgagcataacccaaagagg +cttgaggcagcataccgagagacctgctctcgccgcggtaccgctgcctacccactccttggctcgggcata +taccaagtccccgttagccttagctttgatgcttgggagcgtaaccaccgccccggggacgagctctaccta +accgacctcgccgctacc-------------------------------------------------tggtt +tgaggctaacaagccagcaca--------------------------------------------------- +------------------------------------------gccggcccttacaataactgaggatgcagc +cc------------gcacagccaacctagcactggagatcg------------atgctgctacggaggtcgg +ccgggcttgt---gccggctgtgcagttagtcctggagttgtgcactatcagtttactgctggggtcccagg +ttcggggaagtcgcgttctatacagcagggggatgttgatgtagtggttgttcccactcgggagctccggaa +tagctggcgtcgccggggtttcgcagcttttacacctcatacggcggcccgcgtcaccacgggccgtcgtgt +tgtgattgatgaggccccatccctcccaccgcatttgttactactacacatgcagcgggcctcgtcggtcca +ccttctcggcgacccaaaccagattcctgctatagacttcgagcacgctggcctggtccccgcaatacgccc +tgagcttgcgcccaccagttggtggcatgtcacccaccgttgccctgccgacgtgtgcgagcttatacgcgg +ggcttaccccaaaatccaaaccactagccgcgtgctgcggtctttattctggaatgag------cctgccat +cggccagaagttagtcttcacccaggctgctaaggctgccaaccctggtgcgatcacagtccacgaggccca +gggcgccactttcacggaaactacaatcatagccacagctgatgccagggggctcatccaatcttcccgagc +tcatgccatagttgcacttacccgccacacagagaagtgcgttattcttgacgctcccggcttgttacgtga +ggttggtatatcggatgtgattgtcaacaatttt------------------------------ttcctcgc +cggcg--gggaggtgggtcaccatcgcccctctgtgatacctcgcggtaatcctgaccagaatcttgcgac- +-----actacaggcctttccaccttcttgccagattagtgcctatcaccagttagctgaggaacttggccac +cgcccagctcccgtcgccgctgtcttgcccccctgccctgaacttgagcaaggcttattatatatgcctcag +gagcttacggtgtctgatagtgtgctggtctttgaactcacggacatagtccactgccggatggccgcccct +agccagcggaaggccgtcctatcgacgctcgtgggtaggtacggccgtcggacgaagctgtatgaagctgct +cactctgacgtccgtgagtcccttgctagattcatccccaccattgggcccgttcaggccactacgtgtgag +ttatacgagttggttgaggccatggtggagaaaggtcaggatggctccgccgtgcttgagctcgacctctgc +aatcgtgatgtatcgcgtattacatttttccaaaaagactgtaataaattcaccacaggggagaccattgcc +cacggcaaggtcggccagggcatctcggcttggagtaagaccttttgtgccctgtttggtccgtggtttcgt +gctattgaaaaagaaatattagccctgctcccgcctaatatcttctacggcgacgcatacgaggagtctgtg +ttttccgccgctgtgtcgggggcagattcaagcatg---gtatttgagaatgatttttcagagtttgatagc +acccaaaataacttctccct------------------tggcctcgagtgtgtagttatggaggagtgtggc +atgccccagtggctaatccggttgtaccatttagttcggtcggcctggattctacaggcgccgaaggagtct +cttaaggggttttggaagaagcattctggtgagcccggcaccctcctttggaacactgtttggaatatggcg +atcatagcacactgctatgaatttcgcgatcttagggctgccgctttcaagggagatgactccgtggtcctc +tgtagcgactaccgtcagagccgcaatgcagcggccctgattgcaggttgtgggctcaaactgaaggttgat +taccgccctatcgggttgtatgctggtgtggtggtggcccctggtttggggacgctacccgatgtggtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggctgagcagttgcgcctagctgtt +tgtgacttccttcgagggttaacgaatgttgcgcaggtatgtgttgatgttgtatcccgag-------ttta +tggagttagccctgggctggtacataaccttattggcatgttgcaaaccatagctgatggcaaagctcactt +tacggagactgttaaacccgtgcttgacctcacgaactctatcatacaacgggtggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgcaccgcaatccggggctggagctcgccctc +gacaaccaccccg---------------ccccctcggctcctcttggcgtgatcagtccca----------- +------gcgcccctccgctgtcccacgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgccatatcacctgctcccgacacagcccctgtgcctgatgttgactctcgcggtgccatattgcggcgcca +gtacaatttatccacgtccccgctcacatcatctgttgcatcgggtactaatttggttctttatgctgcccc +gctaaaccctctgctgccccttcaggatggcactaacactcacatcatggccactgaggcatctaattatgc +ccagtatcgagtcgtccgagctacgattcgttacaggccattggtgcctaatgctgtcggtggttatgcaat +atccatctcattttggcctcagactactactacccccacgtctgttgacatgaactctattacttctactga +tgttaggattctagttcagcccggcattgcttctgagttggttatccctagtgagcgcctccattatcgtaa +ccagggctggcgctctgtggagacctcgggtgtggctgaagaggaggctacttctggtttggtaatgctttg +tatccatggctcccctgttaattcctacaccaataccccctataccggggcgcttggactccttgatttcgc +tttagagcttgagtttaggaacttgacacccgggaacaccaacacccgtgtgtcccggtacacaagtacagc +ccgtcatcggctgcgccgcggtgctgacggcaccgcggaacttaccaccacagcggccacgcgcttcatgaa +ggacctgcacttca---ccggaacgaat---ggggttggtgaagtgggtcgtggtattgccctcacactctt +taatctcgctgacacgcttctcggtggtttgccgacagaattaatttcgtcggctgggggacagttattcta +ctcccgccccgtcgtctcagccaatggcgagccgactgttaagttatatacatctgtagagaatgcgcagca +ggataaagggatcgctatcccacatgacatagatctgggcgactcccgtgtggtcatccaagactatgacaa +ccagcatgagcaggatcgacccaccccttcgcctgccccctctcgccccttttcggttcttcgtgctaatga +tgttttatggctttc-----------------------------tcttactgccgccgagtatgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctcggatactgtcacatttgt---taacgtggct +acaggagcccaggctgtcgcccgttcccttgactggtctaaagttaccctggacggccgccctcttactact +at-----ccagcagtactctaaaacattctatgttc-tcccgcttcgcgggaagttatctttttgggaggcc +gggacgaccaag--gccggctacccctataattacaacacaactgctagtgatcaaattctgattgaaaatg +sggctggtcat------cgtgttgctat-ttccacgtataataccagcctggg--------------cgctg +gccctgkgtctgtttc-tgcagttggtgttttagccccacattcggcccttgcagtccttgaagacaccatt +gatt---------accctgcccgtg----cccacacttttgatgatttttgcccggagtgtcgcgctc---t +tggtttgcaggggtgtgccttccagtc--------tactattgctgagcttcagcgcct------------- +--------taaaatgaaggtaggcaaaacccgggagttttaattaa-tt----tc-cctt---t------gt +gccc-cct--------tc------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355250.1/17243/1-7243 |Hepeviridae isolate HESQL078, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggctaactccgccttggcgaatgctgtggtggtccggccgtttttatctcgtgttcaaactgagattct +tattaacctgatgcaaccccggcagcttgtgttccgacccgaagtcctctggaaccacccgatccagcgagt +catacataatgagctggaacaata---ctgccgagccc-gcgctggccgctgtcttgaggtgggcgctcacc +cgagatccattaacgataaccccaatgttctgcaccggtgctttctacgtccggttgggagagacgtccagc +gttggtactccgcccccactcgcggcccagcggccaattgccgccgttctgcgctacgtggcttgccccctg +tcgaccgcacatactgcttcgacgggttctcccgctgcgcctttgccgctgagaccgggatcgctttatact +cactgcatgacctttggccctcggacgttgcagaggctatggcccgccacgggatgacgcgcttgtatgctg +ccctccacctc-ccccctgaggttctgttgccacctggtacttaccacacaacctcctatcttttgattcat +gacggcaaccgtgccgtcgtgacctatgagggggataccagtgcgggctacaatcatgatgtgtccatactt +cgtgcatggatccgtaccactaaaatagttggtgaccatccactggtaatagagagggtccgcgccatcggc +tgccattttgtgttacttcttactgcagcccccgagccatccccgatgccttatgttccgtaccctcgttca +acagaggtctatgtcaggtccatatttggccctggc---------gggtcgccttctcttttcccatcagcc +t----------gctctaccaaatcca-catttcatgctgttcctgttcatatctgggaccggcttatgcttt +ttggtgccactctagacgatcaggccttttgctgctcgcggctcatgacctatctccgcgggattagctata +aagtgaccgttggcgcacttgttgccaacgagggctggaatgcctcggaggatgcgcttactgctgtgatca +ccgcagcgtacttgactatttgtcatcaacgctacttacgaacacaggccatctccaaaggtatgcgccggc +tagaggttgagcacgcccaaaagtttatcacgaggttatacagctggctgtttgaaaagtc---------tg +gccgtgattacatccccggccgccagctccagttttatgcgcagtgccgccgttggctctcagccggtttcc +atctggatcctagagtccttgtctttgatgaggcggtcccctgc---cgctgccggagttttataaagaa-- +----ggttgccgggaaattttgttgttttatgaagtggttggggcagga------gtgtacttgcttcctgg +----------------agccagctgaaggcttggttggtgactgtggc--------catgataatgaggcct +atgaggggtctgaggtggaccctgccgagcccgctcaccttgacgtttctgggacttacgcggtccatggcc +gccagcttgaggctctatatagagcgcttaatatcccagatgacatcgcggctcgtgcgtcacgcctgacag +ctactgtggaacttgccgctagcccgggccggcttgagtgccgtacggtgcttgggaataagaccttccgta +catcaataactgatggtgctcatctcgaagccaacggccc------------------------cgagcagt +acgtcttgacatttgatgactctcgccaggcaatgggggctgggccccacagcctcacgtatgaacttgtcc +ccgccggtctgcaggttagaatatcttct-------aatggtttagactgcaccgccatattcccc---cct +ggtggggcgccaagcgccgcaccaggtgaagtggcggctttttgcagcgccctttacaggtacaataggttc +acccagcgccattcgttgaccggtgggctgtggctgcaccctgaggggcttcttggcctgttccctcctttt +tccccggggcatgtttgggagtctgcaaaccccttttgcggtgagagcacactttacacacggacttggtct +acatctggtttttctagtgacttttctccgcccgaggcggctcatgccgccccagctcctgtcgt----agg +accaccctcgggtgccccttcgtccgctagtgatgt-----------------ctgggtgtt---------- +---------cccaccgccc----tctgaggggt--------------caacaatcgttccgccccccgaaac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtaagccagctaacccgcctagt +cttgctccacctggg-------------------------------------ccccccgcccgtaagccacc +cacgccacc--------------------------------------gccggctcgcactcgccggc----- +-------------------tcctttatacatatcctgatggggccaaggtgtatgcaggctctctgtttgag +tctgactgtgattggctggttaatgcatctaaccccggccaccgtcctggcggtggtctttgccatgcgttt +taccagcgctttccggagtcgt------tccatccagctgactttgtcatgcgtgaggg---cctcgccgca +tacactctgagtccgcgcccgattatccatgcagtggcacccgattacagggttgagcagaaccccaagagg +ctagaggcggcatatcgtgagacctgctctcgtctcggcacagctgcctacccgttactggggtcgggaatt +taccaggtacctgtgggcttaagtttcgacgcctgggagcgtaaccaccgcccgggcgatgaactttatctt +accgagccagctgccgcc-------------------------------------------------tggtt +tgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagcactaacaattactgaggacactgc +cc------------gtacagccaaccttgcacttgcgattg------------attctgctactgatgtggg +ccgtgcttgc---gctggctgtactatcaaccccgggattgtccattatcagtttaccgccggggtccctgg +ctccgggaagtctaggtctatacagcaaggggatgttgatgttgtagtcgtgccaactcgtgagctccgtaa +cagttggcgacgccgcggctttgctgcttttacacctcacacagcagcccgtgttactgccggtcggcgtgt +ggtgatagatgaggcgccttcgctcccgccgcatttgctgttgctccatatgcaacgagcctcatcggttca +ccttcttggcgaccctaaccagatccctgccattgattttgagcatgccggtttggtcccggcaattcgccc +agagctggcccctactagttggtggcatgttacccatcgctgccccgccgatgtgtgcgagctcatacgcgg +ggcctatcctaagattcagacgaccagccgtgtgctgcgatctttattttggaatgag------cctgcagt +gggtcagaggctagttttcacgcaggcagccaaggcggccaaccctggcgcaatcaccgtccatgaggctca +aggcgccacattcacggagaccaccatcatagccacggccgatgctagaggcctcattcagtcctcccgtgc +gcatgccatcgttgcgcttactcgtcatacagaaaagtgtgtcattcttgacgcccccggcctactgcgtga +ggtcggcatttctgatataattgttaacaacttt------------------------------ttcttggc +tggtg--gtgaggttggccaccatcgcccctccactataccccgcggcaacccggaccagaatttagacat- +-----cctacgagcgttccctccgtcctgccaaattagtgcctaccaccagctggctgaggagctaggccac +cggccggccccggtggccgccgtcctgcccccctgccccgagcttgagcaggggttactttatatgccgcag +gagcttactgtgtccgatagcgtcctaatttttgagcttacagacatagttcactgccgtatggctgccccc +aaccagcgtaaggcggtcctttcgacgctcgtcggtaggtatggtcgccgaacgaagctgtatgaagcggcc +cattctgatgttcgcgagtctctagggagattcatccctaccatcgggccggttcaggctaccacatgcgag +ctatatgagctggttgaggctatggtagagaagggccaggatggctccgccgtgctcgagctcgacctctgt +agccgtgatgtctcgcgtatcacatttttccagaaggactgcaataaatttacaacaggtgagaccatcgcc +cacggcaaggtgggccagggcatttcggcttggagtaagaccttttgtgctctatttggcccgtggttccgt +gctatcgagaaggagattctagctctgctcccacccaatattttctatggcgatgcctatgaggagtcagtg +ttttctgcagccatctctggggctggctccagtatg---gtttttgagaatgatttttctgagtttgatagc +acccaaaataatttttctct------------------tggccttgaatgtgttattatggaggagtgtggt +atgccccagtggcttatccgactataccatttggttaggtcagcctggactttgcaagccccgaaggagtct +ttgaaaggcttctggaagaagcactctggcgagcccggtactctcctctggaataccgtttggaacatggcg +atcatagcacactgttatgaattccgtgacctgagagtggcggcgtttaagggggatgattcagtggttctt +tgcagtgattaccgccagagccgtaatgcggccactttgatagccggctgcgggttgaaactgaaggttgat +taccggcctataggcttgtacgccggtgttgtagtggccccgggcctcggggcgcttcccgatgttgtccgg +ttcgccggtcgattatctgagaagaactggggcccgggccccgagcgcgccgaacagttgcgtctagcagtc +tgtgattttcttcgagggttgacgaacgttgcgcaggtctgtgttgatgttgtgtctcgtg-------tcta +tggggttagccccgggctggtacataaccttattggcatgctacagactattgctgatggaaaggcccattt +tactgagaccgtcaagcccgtactggatcttacaaattctatcatacagaggttagaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgtcatgtgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccacgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcggcagcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgtcaccgacgtcgtttcacaatccggggctggagctcgctctc +gacaaccggcccg---------------cccccttggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtctcaccagcgcctgatactgccccagttcctgacgttgattctcgcggcgctattttgcgccgcca +gtataatttgtctacttctcctttaacctcatctgttgcttctggaactaatcttgtcttgtatgccgcccc +gcttaacccccttctgcctctccaggacggcaccaatacccatatcatggcgactgaagcgtctaattatgc +tcagtaccgggtcgtccgggctacaattcgctatcgccctctggtgccgaatgctgtcggtggttatgcaat +ttctatttccttctggcctcagactacaactacacccacctctgttgatatgaattccattacctcgactga +tgttagaattttagttcagcctggtatagcctctgagctggtcattccgagtgaacgccttcattatcgcaa +tcaaggttggcgctccgttgaaacatccggcgtggccgaggaggaggcgacatcaggcttggttatgctttg +tattcatggctcccccgttaattcctatactaacacgccctatactggggcattggggctccttgactttgc +acttgagcttgaatttagaaatctgacccctgggaatactaacacccgtgtgtcccgttacaccagcacagc +ccgacatcgtctgcgtcgtggtgctgacgggacagccgagcttacgactaccgcagccacacgttttatgaa +ggacttgcatttta---ccgggacaaat---ggtgttggtgaggtaggccgtggtatagccctaacgttatt +taatcttgctgatacccttcttggcgggctgccgacagaattgatttcgtcggccggaggtcaattatttta +ctcccgcccggtcgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggcattgctataccacatgatatagacttaggggactcccgcgtggtcatacaagactatgacaa +ccaacatgaacaggaccggcctaccccgtcgccggccccgtcccgccccttttcagtccttcgagccaatga +cgtcctgtggctctc-----------------------------tctaactgcggctgaatatgat------ +cagactacttatggctcgtcgaccaaccccatgtatgtttctgatactgtcacacttgt---taatgtggcg +acgggtgcccaggctgttgcccgttcccttgactggtccaaggtcactttggatggccggccacttaccacc +at-----ccagcagtactccaagacattctatgtgc-tgccgctccgtggtaagctttccttttgggaagct +gggacgactaag--gctggctatccctataactataacactactgccagtgaccagattttgatcgagaatg +cagccggtcac------cgtgtcgccat-atctacttatactactagtcttgg--------------tgccg +gccctgtgtctgtttc-tgcggtcggtgttcttgctccacactctgctttagctgtgcttgaagatactatc +gatt---------accctgcccgtg----cccacacttttgatgatttttgccctgagtgccgtaatc---t +tggtctgcagggatgtgctttccagtc--------tactattgctgagctacagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tttccccc-cct--ttg------gt +gccc-cct--------tc-taaa-tt-tt----ct-tt-gt-----------------tatt-t-------c +ttttttct----gcgg--------------ttcccg----ccccg---------------------agaaaa +ccgtaat---------------aaaaaaaaaa---------------------------------------- +------------------------------------------aa---------------------------- +------------------------------------------------------------------------ +----------- +>MW355251.1/17203/1-7203 |Hepeviridae isolate HESQL058, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggttcggccgtttttatcccgtgttcaaactgaaattct +tattaacctgatgcaaccccggcagcttgtgttccgacccgaagtcctctggaaccacccgatccagcgagt +catacataatgagttggagcaata---ctgccgagccc-gcgctggccgctgtcttgaggtgggcgctcacc +cgagatccattaacgataaccccaatgttctgcatcggtgcttcctccgtccggttggaagagacgtccagc +gttggtactctgcccccactcgtggcccagcggccaattgccgccgttctgcgctacgtggcttgccccctg +tcgaccgcacatactgcttcgacgggttctctcgctgtgcttttgccgctgagaccgggatcgctttatact +cactgcatgacctttggccctcggacgttgcagaggctatggcccgccacgggatgacgcgtttgtatgctg +ccctccatctc-ccccctgaggtcttgttaccacctggtacctaccacacaacctcttatcttttgattcac +gacggcaatcgtgccgtcgtgacttatgagggggataccagtgcgggctacaaccatgatgtgtccatactt +cgtgcatggatccgcaccactaaaatagttggtgatcatccactggtaatagagagggtccgagccatcggc +tgccattttgtcctacttcttactgcagcccccgagccatccccgatgccttatgttccgtaccctcgttca +acagaggtctatgttaggtccatatttggtcccggc---------gggtcgccttctcttttcccatcagcc +t----------gctctaccaaatcca-cattccatgctgttcctgttcatatctgggaccgacttatgcttt +ttggtgccactctagacgatcaggccttttgctgctcgcggcttatgacctatctccgcgggattagctata +aagtgaccgttggcgcacttgttgccaacgagggctggaatgcctcggaggacgcgcttactgctgtgatca +ccgcagcgtacttgaccatttgtcatcagcgctacttacgaacacaggccatctccaaaggcatgcgtcggc +tagaggttgagcatgctcaaaagtttatcacgaggttatacagctggctgtttgaaaagtc---------ag +gccgtgattacatccccggtcgccagctccagttttatgcacagtgccgccgctggctctcagctggtttcc +atctggaccctagagtccttgtctttgatgaggcggtcccctgc---cgctgccggagcttcttaaagaa-- +----ggttgccggaaaattttgttgttttatgaagtggttggggcagga------gtgtacctgcttcctgg +----------------agccagcggaaggcttggttggtgactgtggc--------catgataatgaggcct +atgaggggtctgaggtggaccctgccgagcccgcccaccttgacgtttctgggacttacgcggtccatggcc +gtcagcttgaggctctatatagagcgcttaatatcccagatgacatcgcggctcgtgcgtcacgcctaacgg +ccactgtggaacttgccgccagcccgggccggctcgagtgccgtacggtgcttgggaataagaccttccgta +catcaataactgatggcgctcatcttgaagccaacggccc------------------------cgagcagt +acgtcttgacatttgatgattctcgccaggcaatgggggctgggccccacagcctcacgtatgaacttgtcc +ccgccggtctgcaggttagaatatcttct-------aatggcttagattgtaccgccgtattcccc---cct +ggtggggcaccaagcgctgcaccaggtgaagtggcggctttttgcagcgccctttacaggtacaatagattc +acccagcgccattcgctgactggtgggctgtggctgcaccctgaggggcttcttggcctgttccctcccttt +tccccggggcatgtttgggagtctgcaaaccctttttgcggtgagagcacactttatacacggacttggtct +acatctggtttctctagtgacttttctccgcccgaggcggctcatgccgccccagctcctgtcgt----agg +accaccttcgggtgctccttcgtccgttagtgatgt-----------------ctgggtgtt---------- +---------cccgccgccc----tctgagggtt--------------caacgatcgttccgccacccgaaac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtaagccagctaacccgcctagt +tctaccccacctggg-------------------------------------ccccccgcccgtaagccacc +tacaccacc--------------------------------------gccggcccgcactcgccggc----- +-------------------tcctctatacatatcctgatggggccaaggtgtatgcaggctctctgtttgag +tctgaatgtaattggctggttaatgcatctaaccccggccaccgtcctggcggtggtctttgccatgcgttt +tatcagcgcttcccggagtcgt------tccatccaaccgattttgtcatgcgtgaggg---cctcgccgca +tacactttgagcccgcgcccgattatccatgcagtggcacccgattacagggttgagcagaaccccaagagg +ctagaggcggcatatcgtgagacctgctcccgtctcgggacagctgcctacccgctactggggtcgggtatt +taccaggtgcctgtgggcttaagcttcgacgcctgggagcgtaaccaccgcccaggcgatgaactttacctt +accgagccagctgccgcc-------------------------------------------------tggtt +tgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagcactaacaattacggaggacactgc +cc------------gtacagccaaccttgcacttgcgattg------------attctgccactgaggtggg +ccgtgcttgc---gccggctgtactatcaaccccgggattgtccactatcagtttaccgccggggtccccgg +ctccgggaagtctaggtctatacagcaaggagatgttgatgttgtagtcgtgccaactcgtgagcttcgcaa +cagttggcgacgccgcggctttgctgcttttacaccccacacagcagcccgtgttactgccggtcggcgtgt +ggtgatagatgaggcgccttcgctcccgccgcacttgctgttgctccatatgcaacgagcctcgtcggttca +ccttcttggcgaccccaaccagatccctgccattgattttgagcatgccggtttagtcccggcaattcgccc +agagctggcccctactagctggtggcatgttacccatcgctgtcccgccgatgtgtgcgagctcatacgcgg +ggcctatcctaagattcagacgaccagccgtgtgctgcgatctttattttggaacgag------cctgcggt +gggtcagaggctagttttcacgcaggcagccaaggcggccaaccccggcgcaatcaccgtccatgaagccca +gggcgccacattcacggagaccaccatcatagccacggccgatgctagaggccttattcagtcctcccgtgc +gcatgccatcgttgcgcttacccgccatacagaaaaatgcgtcattcttgacgcccccggcctactgcgtga +ggtcggcatttctgatataattgttaacaacttt------------------------------ttcctggc +tggtg--gtgaggttggccaccatcgcccctccactataccccgcggcaacccggaccagaacttggacac- +-----cttacgagcgtttcctccgtcctgccaaattagcgcctaccaccagctggctgaggagctgggccac +cggccagccccggtggccgctgtcctgcccccttgccctgagcttgagcaagggttactttatatgccgcag +gagcttactgtgtctgatagcgttctaatttttgagcttacagacatagttcactgccgtatggctgccccc +agccagcgtaaggcggtcctttcgacgctcgtcggtaggtatggtcgccgaacaaagctgtatgaagcagcc +cattctgatgttcgcgagtctctagggagattcatccctaccatcgggccggttcaggccaccacatgcgag +ctatacgagctggttgaggctatggtggagaagggccaggatggttccgccgtgctcgagcttgatctctgt +agccgtgatgtctcgcgtatcacatttttccagaaggactgtaataaatttacaacaggtgagaccatcgcc +cacggcaaggtgggccagggcatttcggcttggagtaagaccttttgtgctctatttggcccgtggttccgt +gctatcgagaaggagattctagctctgctcccacccaatattttctatggcgatgcctatgaggagtcagtg +ttttctgcagccatctctggggctggctccagtatg---gtctttgagaacgatttttctgagttcgatagc +acccaaaacaatttttctct------------------tggccttgagtgtgttattatggaggagtgtggc +atgccccagtggcttatccgactataccatttggttaggtcagcctggactttgcaagccccgaaagagtct +ttgaaaggtttctggaagaagcactctggcgagcccggtactctcctctggaataccgtttggaacatggcg +atcatagcacactgttatgaattccgtgacctgagagtagcggcgtttaaaggggatgattcagtggttctt +tgcagtgattaccgccagagccgtaatgcggccactttgatagccggttgcgggttgaaactgaaggttgat +taccggcctataggcttgtacgccggtgtcgtagtggccccgggcctcggggcgcttcctgatgttgtccgg +tttgccggtcgattatccgagaagaactggggccccggccccgagcgcgccgaacagttacgcctagcagtt +tgtgattttcttcgagggttgacgaacgttgcgcaggtttgtgttgatgttgtgtctcgtg-------tcta +tggggttagccccgggctggtacataaccttattggcatgctacagactattgctgatggaaaggcccattt +tacagagactgtcaagcccgtactggatcttacaaattccatcatacagaggttagaatgaataacatgtt- +c----------------tgtgcatcgcccatggg------------atcgccatgtgccctagggctgttct +gttgctgttcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccga------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcaacggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaatccggggctggagctcgctctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtctcaccagcgtctgatactgccccagttcctgatgttgattctcgcggcgctattttgcgccgcca +gtataatttgtctacttcccctctaacttcatctgttgcttctggaactaatcttgtcctgtatgccgcccc +gcttaatccccttctgcctctccaagacggcaccaatacccacatcatggcgactgaagcgtctaattatgc +tcagtaccgggtcgtccgggctacaattcgctatcgccctctggtgccgaatgccgtcggtggttatgcaat +ttctatttccttctggcctcagactacaactacacccacctctgttgatatgaattccattacctcgactga +tgttaggattctagtccagcctggtatagcctctgagctggtcatcccgagtgaacgccttcactatcgcaa +tcagggctggcgttctgttgaaacatctggcgtggccgaggaggaggcgacttcaggcttggttatgctttg +tattcatggttcccccgttaattcctatactaatacgccctatactggggcattggggctccttgattttgc +acttgaacttgaatttagaaatctgacccctgggaacactaacacccgtgtgtcccgttacactagcacagc +ccgacatcgcttgcgtcgtggtgccgacgggacagccgagcttacaactaccgcagccacacgttttatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggcgaggtaggccgtggtatagccctaacgctatt +taatcttgctgatacccttctcggcgggctgccgacagaattgatttcgtcggccggaggtcaactgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggcattgctataccacatgatatagacttaggggactcccgcgtggtcatacaagactatgacaa +ccaacatgaacaggaccggcctaccccgtcgccggccccgtcccgccccttttcagtcctccgagccaatga +tgtcctgtggctttc-----------------------------tttaactgcggctgaatatgac------ +cagactacttatggctcgtcgactaaccccatgtatgtttcagatactgtcacacttgt---taatgtggcg +acaggtgcccaggctgttgcccgttctcttgattggtctaaggtcactttggatggccggccactcaccacc +at-----ccagcagtattccaagacattttatgtgc-tgccgctccgtggtaagctctccttttgggaagct +ggtacgactaag--gctggctatccctataactataacaccactgccagtgaccagattttgatcgagaatg +cagccggtcac------cgtgtcgccat-atccacttacaccactagtcttgg--------------tgccg +gccctgtgtctatttc-tgcggtcggtgttcttgctccgcactctgctttagctgtgcttgaggatactatc +gatt---------accccgcccgtg----cccatacttttgatgatttctgccctgagtgccgtaatc---t +cggtctgcagggatgtgctttccagtc--------tactgttgctgagctacagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-ccc--ttt------gt +gccc-cct--------tc-taaa-tt-tt----tc-tc-tg-----------------tatt-c-------t +ttttttct----gcgg--------------g----------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355252.1/17175/1-7175 |Hepeviridae isolate HESQL150, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccatcgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggttcggccgtttttatcccgtgtccaaactgaaatcct +tattaacctgatgcaaccccggcagcttgtgttccgtcctgaagtcctctggaaccatccgatccagcgagt +gatacataatgagttggagcagta---ctgccgagccc-gcgctggccgctgtcttgaggtgggcgctcacc +caaggtctattaatgacaaccccaacgttctgcatcggtgctttctccgtccggttggaagagacgtccagc +gctggtactctgcccccactcgtggtccagcagcaaattgccgccgttctgcgctacgtggtttgccccctg +ttgatcgcacgtactgcttcgatgggttctcccgttgcgcttttgccgctgagaccgggatcgctttatact +cactgcatgacctctggccctcggacgtcgcggaggccatggcccgccacgggatgacgcgtttatatgctg +ccctccactta-ccccctgaggtcctgttaccacccgggacttaccatacaacttcctatcttttgattcac +gacggtaaccgtgccgtcgtgacttacgagggggatactagtgcgggctataaccacgatgtgtctatactt +cgtgcatggatccgcactaccaaaatagttggtgatcatccactagtaatagagagggtccgcgccatcggc +tgccacttcgtcctgctccttactgcagcccccgagccatccccgatgccttatgttccgtaccctcgctca +acagaggtgtatgttagatctatatttggccctggc---------gggtcaccttctcttttcccatcagcc +t----------gctctaccaaatcta-cattccatgctgttccggtccatatttgggaccggcttatgcttt +ttggtgccaccctagatgatcaggccttctgctgttcgcggcttatgacctacctccgcgggattagctata +aagtgaccgttggcgcacttgtcgccaacgagggctggaatgcctcagaggatgcgctaactgccgtgatca +ccgcagcgtacttgaccatctgtcaccagcgctacctacgaacacaggccatttctaaaggtatgcgccgtc +tagaggtcgagcatgcccaaaagtttattacaaggttatacagctggttgtttgaaaagtc---------ag +gccgtgattacatccccggccgccagctcgagttttatgcccaatgccgccgctggctctcagctggtttcc +atctggaccctagagtccttgtttttgatgaggcggtcccctgc---cgctgccggagcttcttgaaaaa-- +----aattgccggaagattttgctgttttatgaaatggttggggcagga------gtgtacttgttttctgg +----------------agccagcggaaggcctagttggtgactgtggt--------catgataatgaggcct +atgaagggtctgaggtggactccgccgagcctgctcaccttgatgtctctgggacctatgcggtccatggcc +gtcagcttgaggctctatatagggcgcttaatatcccagatgatattgcagctcgtgcgtcacacctgacgg +ctactgtggaacttgccgccagcccgggccgactcgagtgccggacggtgcttgggaacaagaccttccgca +catcaataactgatggtgcccatctcgaggctaacggacc------------------------cgagcagt +acgtcttgacatttgatgattcccgccaggcaatgggggctgggcctcacagtctcacgtatgaacttgtcc +ccactggtttgcaggttaaaatatcttct-------aacggcctggattgcaccgctatattcccc---cct +ggtggggcaccaagtgctgcgccaagtgaagtggcggctttctgcagcgccctatataggtacaacaggttt +acccagcgccattcgctgaccggtgggctgtggctacatcctgaggggctcctcggcctgttcccccccttt +tccccggggcacctatgggagtccgcaaaccccttctgtggtgagagtacactttacacacgaacttggtct +acatctggcttctctagcgacttctccccgcctgaggcggctcaagccgccccagtccctgatgt----tgg +accacctttgggtgccccctcttctactagtgatgg-----------------ttgggtgtt---------- +---------tccaccgccc----tctgaggggt--------------cagcgatcgttccgctacccgtaac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcggtaagccagctaacccgcttagt +cttgctacacctcgg-------------------------------------ccccctgcccgtaagccgcc +tacaccacc--------------------------------------accggctcgcactcgccggc----- +-------------------tcctttatacgtatcccgatggggccaaggtgtatgcaggctctctgtttgag +tcagattgtgactggctagttaatgcatctaatcccggccaccaccccggcggtggtctttgccatgcattt +taccaacgctttccggaatcat------tccacccggctgattttgtcatgcgtgaggg---tcttgccgca +tacactttgagcccgcgcccgatcatccatgctgtggcccccgactacagggttgagcagaaccccaagaga +cttgaggcggcatatcgtgagacctgctcccgcctcggcacagctgcctacccgctattagggtcggggatt +taccaggtgcctgtgggcctaagcttcgacgcctgggaacgtaaccaccgcccaggcgacgaactttacctt +actgagccggctgccgcc-------------------------------------------------tggtt +cgaggccaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacactgc +cc------------gcacagccaaccttgcgctcgagatag------------actccgcaaccgaggtggg +tcgtgcttgt---tccggctgtactattaaacccgggattgtccattaccagtttaccgccggggtccctgg +ctccgggaagtctagatctatacagcagggggatgttgatgttgtagtcgtgccgactcgtgagcttcgtaa +tagctggcggcgtcgcggctttgctgcttttacaccccacacagctgctcgcgttactgccggtcggcgtgt +ggtgatagatgaggcaccttcgctcccaccgcacttgctgttactccatatgcagcgggcctcatcggtcca +cctcctcggtgaccccaatcagatccctgctattgactttgaacacgccggtttggtccctgcgattcgccc +cgagcttgcccccactagttggtggcatgtcacccatcgatgccctgccgatgtgtgtgagcttatacgcgg +ggcttacccaaagatccagacgaccagccgtgtattgcgatctttattttggaatgag------cctgcggt +gggccagcggttggttttcacgcaggcggccaaagcggccaaccccggtgcaattaccgttcatgaggccca +gggcgccacgttcacggaaactaccatcatagccacggccgatgctagaggtcttattcaatcttcccgtgc +acatgctatcgttgcacttacccgccatacagaaaaatgcgtcattcttgacgcccctggcctgctgcgtga +ggtcggtatttctgatataattgttaataatttt------------------------------ttcttggc +tggtg--gtgaagtgggtcatcatcgcccctctaccataccccgcggcaacccagaccagaacttagacac- +-----cctacaagctttcccaccgtcctgtcaaattagtgcctatcaccagctggctgaggagctgggccat +cgaccggccccagtggccgccgtcctgcccccttgccccgagcttgagcagggactactttacatgccgcag +gagcttacggtgtccgatagcgttttaacttttgaactcacggacatagttcattgccgtatggctgccccc +agtcagcgtaaggcggtcctttcgacgctcgttggcaggtacggccgccgaacgaagctgtacgaagcggcc +cattctgatgtccgcgagtctttagggaggtttatccccactatcgggccggtccaggtcaccacgtgtgag +ctgtatgagctggttgaggccatggtggagaagggccaggatggctccgccgtgctcgagcttgacctttgc +agccgtgatgtttcgcgtattacattcttccagaaggattgtaataaatttacaacaggtgagaccattgcc +cacggcaaggtgggccagggcatttcggcttggagtaagactttctgtgctttattcggcccgtggttccgt +gccattgagaaggagattctggctctactcccacctaacattttctacggtgatgcctatgaggagtcggtg +ttttctgcagctatttctggggccggctccagcatg---gttttcgagaacgatttctctgagtttgatagt +acccaaaacaatttttctct------------------tggccttgagtgcgttattatggaggagtgtggc +atgccccagtggctaattcggctgtatcatctagtcaggtcagcctggaccctgcaagccccgaaagagtct +ttgaaaggtttctggaagaagcattctggcgaacctggtactctcctttggaacaccgtctggaacatggcg +atcatagcacactgctatgaattccgtgacttgagagtggcagcgttcaaaggggatgattcagtggttctt +tgcagtgattaccgtcagagccgtaatgcggccgccctgatagccggctgcgggctgaaactgaaggttgat +taccggcctataggtttgtatgccggcgttgtagtggctccaggcctcggggcgcttcctgatgttgtccgg +ttcgccggtcgattatctgagaagaactggggccccggccccgagcgcgccgaacagttgcgcctggcagtt +tgtgatttcctcagagggttgacgaacgttgcgcaggtttgtgttgatgttgtgtcccgcg-------tata +tggggttagccccgggttggtgcataaccttattggcatgctacaaactattgctgatggaaaggcccattt +caccgaaactgtcaagcctgttttggaccttacgaactctattatacagaggttggaatgaataacatgtt- +c----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgctcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cagcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaacccggggctggagctcgctctc +gacagccggtccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgccgtcgatctacccca---------actggggctgcgccgctaac +tgctgtttcaccagcgcctgatacggccccagtccctgatgttgactcccgcggcgctattttgcgtcgcca +gtataatctgtccacctcccctctaacttcatctgtcgcctctggaactaatctcgtcttgtatgccgcccc +gcttaatcctcttctgcctcttcaagacggcactaacactcatattatggcaactgaggcgtccaattacgc +tcagtaccgggttgttcgggccacaatccgctatcgccctttggtgccgaacgccgttggtggttatgcaat +ttctatttccttctggcctcagactacaactacacccacctctgttgatatgaattccattacttctactga +tgttaggattttggtccagcctggtatagcctctgagctggtcatcccgagtgagcgccttcactaccgtaa +tcaaggttggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggcttggttatgctttg +tattcatggttcccccgttaattcttataccaatacgccctatactggggcattggggctcctcgattttgc +actcgagcttgaatttagaaatttaacccctggtaatactaatacccgtgtgtcccgttacactagtacggc +ccgacaccgtttgcgccgcggcgccgatgggacagccgagcttacaactaccgctgccacacgttttatgaa +ggacttgcatttca---ccgggacaaac---ggtgttggcgaggtaggccgtggcatagccctaacgttatt +caaccttgctgatacacttctcggcgggctgccgacagaattgatttcgtcggctggaggtcaactgtttta +ctcccgcccagttgtctcagccaatggcgagccaactgttaagttatacacttctgtcgagaatgcacagca +ggacaagggcattgctataccacacgacatagatttaggggactcccgtgtggttatacaagactatgacaa +ccaacatgagcaggatcggcctaccccgtcgccggccccgtcccgtcccttttcagtccttcgagccaatga +tgtcttgtggctttc-----------------------------tttgactgcggctgaatacgac------ +cagactacctacggctcgtcgaccaaccccatgtatgtttcagatactgttacatttgt---taatgtggcg +acaggtgcccaggccgtcgcccgctcccttgattggtccaaggtcactctggatggtcggccactcaccacc +at-----ccagcagtactccaagacattctatgtgt-tgccgcttcgtggtaagctttccttttgggaagct +ggtacgactaag--gccggctacccttataattacaatactactgctagtgaccagattttgattgagaatg +cagctggtcac------cgtgttgctat-atctacttacactactaatcatgg--------------tgccg +gccccgtgtcagtctc-tgcagaaaacgttcttgctccgcactctgctctagctgtgcttgaggataccatt +gact---------accctgcccgtg----ctcatacttttgatgatttctgccctgagtgccgtaatc---t +cggcctgcagggttgtgctttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----tc-cct--tt-------gt +gccc-cct--------tc-taaa-tt---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355257.1/17322/1-7322 |Hepeviridae isolate HESQL097, complete genome +--------------------------------------------------------------ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactaccgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggtccggccgtttttatcccgtgttcagactgatatcct +cattaacttgatgcaaccccgtcagcttgtgtttcggcctgaagttctctggaaccacccgatccagcgagt +catacataatgagctggaacaata---ttgtcgagccc-gcgctggccgctgtcttgaggtgggcgcccacc +caaggtccattaacgacaaccctaatgttctgcaccggtgctttctccgcccggttggaagagacgtccagc +gctggtattctgcccccactcgtggtccagcggctaattgccgccgctctgcgctacgcggcttgcccccgg +ttgatcgcacatattgcttcgacgggttctcccgctgcgcctttgccgccgagaccgggatcgctctatatt +cattgcatgacctttggccctcggatgtcgcggaagctatggcccgccacgggatgacgcgcttgtatgccg +ccctccaccta-ccccctgaggttctgctaccacccggcacataccatacaacttcttaccttttgatccac +gacggcaaacgcgctgttgtgacttatgagggggataccagtgcgggttataaccacgacgtgtccatactt +cgtgcatggattcgtaccaccaagattgttggtgatcatccactggtaatagagagggtccgcgccatcggc +tgccattttgtcttactccttactgcagcccccgagccatccccaatgccctatgttccatatcctcgttca +acagaggtgtatgttagatccatatttggccccggt---------gggtcgccttctctctttccatcagcc +t----------gctctaccaagtcca-cattccatgctgtcccggttcatatctgggaccggcttatgctct +ttggcgccaccctagacgatcaggccttttgttgctcgcggcttatgacctatctccgcgggattagttata +aagttaccgttggtgcactcgtcgctaacgagggctggaacgcctctgaggatgcgcttaccgctgtgatca +ctgcagcgtacctgaccatttgccatcagcgctacctacgaacacaggccatttccaagggcatgcgtcgat +tagaggttgagcacgcccaaaaatttattacaaggctatatagctggctgtttgaaaagtc---------ag +gacgtgattacatccccggtcgccagctccagttttatgcgcagtgccgccgttggctctcggctggcttcc +atctggaccctagagttcttgtcttcgacgaggcggtcccctgc---cgctgccgtagcttcctaaagaa-- +----ggttgccgggaagttttgttgtttcatgaaatggttagggcagga------atgcacttgctttctgg +----------------aaccggcggaaggcctggttggtgattgtggc--------catgataatgaggcct +atgaagggtctgaggtggaccccgccgagcctgctcaccttgatgtttccgggacttatgcgatttgcggcc +gtcagcttgaggctctatatagagcgcttaatatcccagatgacattgtggctcgcgcattacgcctgacgg +ccactgtggagctcgccgccagcccaggccgactcgagtgccgcacggtgcttgggaataagactttccgca +catcaataactgatggtgcccatctcgaggccaacggtcc------------------------cgagcagt +atgtcctgacatttgatgactcccgccaggcaatgggggccgggcctcatagcctcacgtatgaacttgtcc +ctgctggtttgcaagttaaaatgtcctct-------aatggcttagactgtaccgctatattcccc---cct +ggcggggcgccaagcgccgcaccaggtgaggtggcggctttttgtagcgccttatacaggtacaataagttc +actcagcgccattcgctgaccggtgggttgtggctgcaccctgaggggctccttggcctgtttcctcctttc +tccccggggcatctttgggagtctgcaaatcccttttgcggcgagagcacattatacacacgaacttggtct +acatctggtttttcaagtgacttctccccacccgaagcagcttatgccgctccagtccccgacac----agg +gctaccctcgggtgtcccctcgtccgccagtgatat-----------------ttgggtgtt---------- +---------tccaccgccc----tctgaagggt--------------cagtgactgttccgccatccgtgac +cccggtcagtaagccaactaa---------------------------------------ctcgcc------ +------------------------------------------------------------------------ +-caatttttc-------------------------------------------------------------- +-------------catacct----aggcctcccgcctgtgagccacctacgccattaccggccccaactccg +g---------------------------------------------tcagtaagccagctaacccgcctagt +ttaactacacctatg-------------------------------------cctcccgcccgcgagccgtc +tacaccacc--------------------------------------gccggcccgcactcgccggc----- +-------------------tcctttatacatatcccgatggggccaaggtgtatgcaggctctttgtttgag +tcgggttgtgattggctggttaatgcatccaaccctggtcatcgccctggcggtggtctctgtcatgcattt +tatcagcgtttcccggagtcgt------tccatccgactgattttgttatgcgtgaagg---tctcgccgca +tatactttgagcccgcgtccgatcattcatgctgtggcccctgactacagggttgagcagaatcccaagagg +ctagaggcggcataccgagagacctgctcccgcctcggtacagctgcttacccattactggggtcagggatt +taccgggtccctgtaggcctaagctttgacgcctgggagcgtaaccaccgcccgggcgatgaactttacctt +actgagccggctgccgcc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaatcactgaggacactgc +cc------------gcacagctaatcttgcgcttgagattg------------attccgctactgaggtggg +ccgtgcctgc---gctggctgcattattaaccccgggattgtccactaccagttcaccgccggggttcctgg +ctctgggaagtctaggtctatacagcagagggatgttgatgtcgtggtcgtgccaacccgtgagctccgtaa +tagttggcgccgccgcggctttgctgcctttaccccccacacagcagcccgtgtcactgccggccggcgtgt +ggtgatagatgaggcgccttcgcttccaccgcacttgctgttgctccatatgcagcgggcctcatcggtcca +tcttcttggtgatcctaatcagatccctgccatcgattttgaacacgccggtctagtcccagcgattcgccc +tgagttggcccccactagttggtggcatgtcacccaccgctgcccagccgatgtgtgtgagctcatacgcgg +ggcctacccaaagattcagacaaccagccgtgtgttgagatctttattttggaatgag------cctgcggt +tggtcaaaggctggttttcacgcaggcagctaaggcggctaaccccggcgcaatcaccgttcatgaggccca +gggtgccacgttcactgagactaccatcatagccacggctgatgctagaggtcttattcaatcttctcgtgc +acatgccattgttgcacttactcgccatacagaaaaatgcgtcattctcgacgctcctggtctactgcgtga +ggtgggtatttctgatgtaatcgtcaataacttt------------------------------ttcttggc +tggtg--gtgaagtgggccaccatcgaccttccattataccccgtggcaacccggaccaaaatctagacat- +-----tttacgagcattccctccgtcttgccagattagtgcttaccaccaattggccgaggagctgggccac +cggccggccccagtagccgctgtcctgcccccctgccccgagcttgagcaggggctactctacatgccgcag +gagctcacggtgtccgatagtgtcctgactttcgaactcacggatatagtccactgccgtatggctgccccc +agccaacgcaaggcggtcctctctacgctcgtcggcaggtacggccgccgaacgaagctgtatgaagcagcc +cactctgatgttcgagagtctttagggaggttcatccctactatcggaccggtccaggctaccacatgcgag +ctgtatgagctggttgaggccatggtggagaagggccaggacggctccgccgtgcttgagcttgacctttgc +agccgtgatgtctcgcgtattacatttttccagaaggattgtaataaatttacaacaggtgaaaccattgcc +cacggcaaagtaggccagggcatttcggcttggagtaagaccttctgtgctttatttggcccgtggttccgt +gccattgaaaaggagattctggctctgctcccacccaacattttctatggcgatgcctatgaggagtcagtg +ttctctgcagctatttctggggctggctccagtatg---gtatttgagaacgacttctctgagtttgatagc +acccaaaacaatttttccct------------------tggccttgagtgcgtcattatggaggagtgtggc +atgccccagtggcttatccgactgtaccatttagttagatcagcctggaccctgcaagccccgaaagagtct +ttgaaaggtttttggaagaagcactctggcgagcccggcaccctcctttggaacactgtctggaacatggca +atcatagcacattgctatgaattccgtgacctgagagtggcagcgtttaaaggggatgactcagtggttctt +tgtagtgattatcgccagagccgcaatgcagctaccttgatagccggatgtggattgaaattgaaggttgac +taccggcctataggcttgtatgccggtgttgtggtggccccgggtctcggggtgcttcctgatgttgtccgg +tttgccggtcgactatctgagaagaactggggcccgggccccgagcgtgctgagcagctgcgtctagcggtt +tgtgatttcctccgagggttgacgaatgttgcgcaggtttgcgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttatcggtatgctacagactattgctgatgggaaggcccattt +tactgagactgtcaagcctgtgctagaccttacaaactctatcatacagaggttggaatgaataacatgtt- +c----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gctgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccatcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaatccggggctggagctcgccctc +gacagccggcccg---------------cccccttggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgccgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtttcaccagcgcctgatacggccccagtccctgatgttgattctcgtggcgctatcttgcgccgtca +gtataatctgtccacctctcccctaacatcatctgtcgcctctggaactaatcttgtcctgtatgccgcccc +gcttaatccccttctgcctctccaagacggcaccaacacccatattatggcgactgaggcgtctaattacgc +ccagtatcgggttgtccgggctacaatccgctatcgccctctggtaccaaatgccgttggtggttatgcaat +ctctatttccttctggcctcagaccacaactacacccacctctgttgatatgaattccatcacttccaccga +tgtcaggattttagtccagcctggcatagcctctgagctagtcatcccgagtgagcgccttcactatcgtaa +ccaaggctggcgctctgttgagacgtcgggtgtggccgaggaggaggcgacatcaggcctggttatgctctg +tattcatggttcccctgttaattcctacaccaacacgccctacaccggggcattggggcttctcgactttgc +actcgagcttgaatttagaaatctaacccctgggaacactaacacccgtgtgtcccgctatacaagtacagc +ccggcaccgtctgcgtcgcggtgccgatgggacagccgagcttacaactaccgcagccacacgttttatgaa +ggacctgcatttca---ccgggacaaat---ggtgttggtgaggtgggccgtggtatagctctcacgctatt +taatcttgctgatacacttctcggtgggctgccgacagaattgatttcgtcggctggaggtcaactgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgtcaagttatacacctctgtcgagaatgcacagca +ggacaagggcattgctataccacacgatatagatttaggggattcccgtgtggttatacaagactatgataa +ccaacatgaacaggaccggcctactccgtcaccggccccgtcccgccccttttcagtcctccgagccaatga +tgttttgtggctctc-----------------------------tctgactgcggctgaatatgac------ +cagaccatttatggctcgtcgactaaccccatgtatgtttcagacactgtcacatttgt---taatgtggcg +actggtgcccaggctgttgcccgatcccttgattggtccaaggtcactttggatggccggccgctcactacc +at-----ccagcagtactccaagacattttatgtgc-ttccgcttcgaggcaagctttccttttgggaagct +ggtacgaccaaa--gctggctacccctacaattataacactactgctagtgaccagattttgatcgagaatg +cagccggccat------cgtgttgctat-atctacctatactaccagccttgg--------------tgctg +gccctgtgtctgtttc-tgcagttggtgtccttgccccgcattctgctttagctgtgcttgaggatactatc +gatt---------accctgcccgtg----cccatacttttgacgatttttgccctgagtgccgcaatc---t +cggcctgcagggctgtgctttccagtc--------cactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattaa-tt----cc-cct--ctt------gt +accc-cct--------tc-caaa-tctgc-------tc-tgat---------------atat-a-------a +tatcatct----gcg---------------ttcgt-cgccccgac---------------------aaaaat +gaaaaa----------------agaaaaaaat---------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355259.1/17174/1-7174 |Hepeviridae isolate HESQL181, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatcccgtgttcaaactgatattct +tattaacttaatgcaaccccggcagcttgtgttccgacctgaagtcctctggaatcacccgatccagcgagt +cattcataatgagctggagcaata---ctgtcgagccc-gcgccggccgctgcctagaggtgggcgctcacc +caagatctattaatgacaaccccaatgttctgcaccggtgctttctccgcccagttgggagagacgtccagc +gctggtactcagcccctactcgtggtccagcggccaattgccgccgctctgcgctacgtggtttgccccctg +tcgatcgcacatactgcttcgacgggttctcccgctgcgcctttgccgctgagaccgggattgctttatact +cactgcatgacctttggccttcggacgttgcagaggctatggctcgccatgggatgacgcgcttgtatgccg +ccctccaccta-ccccctgaggtcctgttgccgcctggcacctaccacacaacctcctatcttttgattcac +gatggcaaccgcgccgtcgtgacttatgagggggatactagtgcaggttacaaccacgatgtatctatactt +cgtgcatggatccgcaccactaaagtagtcggtgatcacccattggtcatagagagggtccgcgccatcggc +tgccattttgttttgctcctcactgcagcccccgagccatccccgatgccttatgttccgtaccctcgttca +acggaggtgtatgttagatccatatttggccctggt---------gggtcgccttctcttttcccatcagct +t----------gctctactaaatcta-cattccatgctgttccggttcatatttgggaccggctcatgcttt +tcggcgccaccttagatgatcaggccttctgctgctcgcggcttatgacctacctccgcgggattagctaca +aagtgaccgttggcgcacttgtcgccaacgagggctggaatgcctcagaggacgcgcttactgctgtaatta +ccgcagcgtatctgactatctgccatcagcgctacctacgaacacaggccatctctaaaggcatgcgccggc +tagaggtcgagcatgcccaaaaatttatcacaaggctatatagctggctgttcgagaagtc---------ag +gccgtgactacatccccggccgccagctacagttttatgcgcagtgccgccgctggctttcagctggtttcc +atctggaccctagagtcctcgtttttgacgaggcggtcccctgc---cgttgccggagcttcttaaagaa-- +----ggttgccgggaaattttgttgttttatgaagtggttgggtcagga------gtgcacttgcttcctgg +----------------agccagcggaaggcttggttggtgactgtgga--------cacgataatgaggctt +atgaagggtctgaagtggaccccgccgagcctgctcatcttgatgtttctgggacttatgcagttcatggcc +gtcaacttgaggctctatatagagcgcttaatatcccggatgacatcgcggctcgcgcgtcccgcctgacgg +ctactgtggaacttgccgccagcccaggccggcttgagtgccgtacggtgcttgggaacaagacctttcgaa +cttcaataaccgatggtgcccatctcgaggccaacggtcc------------------------cgaacagt +atgttttgacatttgatgattctcgccaggcaatgggggctgggcctcacagcctcacgtatgaacttgtcc +ctgccggtctgcaggttaaaatatcttct-------aatggcctggattgtaccgccatattcccc---cct +ggcggggcaccaagtgctgcaccaggtgaggtagcggctttttgcagcgccctatacaggtacaacaggttc +acccagcgccattcgttgaccggtgggctttggctgcaccctgaagggctccttggtctgttcccccctttc +tccccagggcacctttgggagtctgcaaaccccttctgcggtgagagtacactttacacacggacttggtct +acatctggtttctctagcgacttctccccgcccgaggcggcttatgccgccccggttcatgacgt----ggg +gctaccctcgagtgccccctcgtccgctagcgatgt-----------------ctgggtatt---------- +---------tccaccacct----tctgaagggt--------------cggcggtagcttcgccgccagatac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttagtaagccagccagcctgccgaga +cctgctgcacccagg-------------------------------------ccccccgtctgtaagccgtc +tacgccatc--------------------------------------accagcccgcactcgccggc----- +-------------------tcctttatacatatcctgatggggccaaggtgtatgcgggctctctgtttgaa +tcagattgtgattggctggttaatgcatctaaccctggccaccgccccggtggtggtctctgtcatgcattt +taccagcgcttcccagagtcgt------tccatccgactgactttgtcatgcgtgaggg---tctcgccgca +tacactttaagcccgcgcccgattattcatgctgtggcccccgactacagggttgagcaaaaccccaagagg +ctagaggcggcgtatcgtgagacctgttcccgcctcggcacagctgcttacccactactggggtcggggatt +taccaggtgcctgtaggcttaagctttgacgcctgggagcgtaaccaccgcccaggcgacgaactttacctc +actgagccagcagccgcc-------------------------------------------------tggtt +cgaggctaataggccaaccca--------------------------------------------------- +------------------------------------------gccagccttaacaattactgaagacaccgc +cc------------gcacagccaaccttgcgcttgagattg------------actccgctactgaggtggg +tcgtgcttgt---gccggctgcaccgttagccccggggtcgtccactaccagttcactgccggggttcctgg +ctccgggaagtctaggtctatacagcagggggatgttgatgttgtagtcgtcccaacccgtgagcttcgcaa +tagctggcggcgccgcggctttgctgcttttacaccccacacggcagctcgtgtcactgctggccggcgcgt +ggtgatagatgaggcaccttcgcttccgccgcatctgttattgctccacatgcagagagcctcatcggtcca +tcttcttggtgaccccaaccagatccctgctattgactttgagcatgccggtttggtcccagcgatccgccc +tgagctcgctcctactagttggtggcatgttacccatcgctgccccgccgatgtgtgtgagctcatacgcgg +ggcttacccaaagattcagacgaccagccgtgtgctgcgatctttattttggaatgaa------cctgcggt +gggtcagaggctggtcttcacgcaggcagccaaggcggcaaaccctggcgcaattaccgtccatgaagccca +gggtgccacatttactgagactaccattatagccacggccgatgctcgaggccttattcaatcctcccgtgc +acatgccatcgttgcacttactcgccatacagagaaatgcgtcattctcgacgctcctggcctactgcgcga +ggtcggcatttctgatataattgttaataatttc------------------------------ttcctggc +tggtg--gtgaggtgggccaccatcgcccttctattatacctcgcggtaacccagaccagaacctagacac- +-----cctacgggcattccctccctcctgccaaattagtgcttaccaccagctggctgaggagttgggccac +cggccggccccagtggccgccgtcctgcccccctgcccagagctcgagcagggactactttacatgccgcag +gagctcacggtttccgatagtgtcctaatttttgaactcacggacatagtccactgccgtatggctgccccc +agccaacgtaaggcggtcctttcaacgcttgtcggtaggtatggccgccgaacgaagctgtatgaagcggcc +cattctgatgttcgtgagtctttagggaggttcatcccaactatcggaccggtccaggccaccacgtgcgag +ctatacgagctggttgaggcgatggtggagaagggccaagatggctctgccgtgctcgagctcgacctctgc +agccgtgatgtctcgcgtattacatttttccagaaggattgtaataaatttacaacaggtgagaccattgcc +catggtaaggtgggccagggcatctcggcttggagcaagaccttttgtgctttatttggcccgtggttccgt +gctattgagaaggagatcctagccctgctcccacccaatattttctatggtgatgcttatgaggaatcagtg +ttttctgcagccatttctggggctggctccagtatg---gttttcgagaatgatttttctgagtttgatagc +actcaaaataatttttctct------------------tggccttgagtgcgttattatggaggagtgtggc +atgccccagtggctcatccgactgtaccatttagttaggtcagcctggaccctgcaagccccgaaagagtct +ttgaaaggtttttggaagaagcattctggcgaacctggcactctcctttggaacaccgtttggaacatggct +atcatagcacattgctacgagttccgtgatttgagagtggcagcatttaaaggggatgattcagtggttctt +tgcagtgattatcgccagagccgcaatgcggccacccttatagccggttgcgggttgaaactaaaggttgac +taccggcctatagggttgtatgccggtgttgtggtggctccgggccttggggcgcttcccgatgttgttcgg +tttgccggtcgactatctgagaagaattggggcccgggccccgagcgcgccgaacaattgcgtctggcagtt +tgtgatttccttagaggattaacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggtcagccccgggcttgtgcataaccttattggcatgctacagactattgctgatggaaaggcccattt +tactgagactgtcaagcctgtattggatcttacaaattctatcatacagaggttggaatgaataacatgtc- +t----------------tgtgcatcgcccatggg------------accgccatgcgccctagggctgttct +gttgttgctcctcatgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtaccacaatccggggctggagctcgccctc +gacagccggtccg---------------ccccctcggctcctcatggcgtgaccagtccca----------- +------gcgcccctccgctgccacccgtcgtagatctacccca---------actggggctgcgccgctaac +tgctgtttcaccagcccctgatacggccccagttcccgacgttgactctcgtggcgctattttgcgccgcca +gtataatttgtccacttctcctttaacttcatctgttgcttctgggactaatcttgttttatatgctgcccc +gcttaatcctcttctccctctccaagacggcaccaatacccacatcatggcgactgaggcgtctaattacgc +tcagtaccgggttgtccgggctacaatccgctatcgccctttggtgccgaatgccgtcggtggttatgcaat +ttctatttccttctggcctcagaccacaactacacccacctctgttgatatgaattccattacttcaactga +tgttaggattttagtccaacctggcatagcctctgaactggtcatcccgagtgaacgcctccactaccgtaa +tcagggttggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggtctggtcatgctttg +cattcatggttcccctgttaactcctataccaacacgccctatactggggcgctggggctccttgactttgc +acttgagcttgaatttagaaatctgacccccgggaacactaacacccgtgtgtcccgttacactagcacagc +ccggcatcgtttgcgccgtggtgctgatggcaccgccgagcttacaaccactgcagccacacgttttatgaa +ggacttgcatttca---ccgggacaaat---ggtgtcggtgaggtgggccgtggtatagctttaacgctatt +taatcttgctgatacacttctcggcgggctgccgacagaattgatttcgtcggctggaggtcaactgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggcattgctataccgcatgatatagatttaggggattcccgtgtggttatacaagattatgacaa +ccaacatgaacaagaccggcctaccccgtcaccggccccgtcccgccccttttcagtcctccgagccaatga +tgtcttgtggctttc-----------------------------tctgactgcggctgaatatgac------ +cagactacctatggctcgtcgaccaaccccatgtatgtttcagatactgtcacttttgt---taatgtggca +acaggtgctcaggccgttgcccgttcccttgactggtctaaggtcaccttggacggccgcccacttaccacc +at-----ccagcagtattctaagacgttctatgtgc-tgccacttcgcggcaagctttccttttgggaagct +ggtacgactaag--gctggttacccttataattataacactactgctagtgatcagattttaattgagaatg +cagccggccac------cgtgttgccat-atctacatacactactagtcttgg--------------cgccg +gccctgtatccgtttc-cgcggtcggcgttcttgccccgcattctgctttagccgtgcttgaagacactatt +gact---------atcccgcccgtg----cccatacttttgatgacttctgccctgagtgccgtaacc---t +cggcttgcagggctgcgcgtttcagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa--t----tc-ctc--ctt------gt +gccc-cct--------tc-taaa------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355260.1/17322/1-7322 |Hepeviridae isolate HESQL057, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatcccgtgttcaaactgatatcct +tattaacttgatgcaacctcgacagcttgtgttccggcccgaagtcctctggaatcatccgatccagcgagt +tatacataatgaactggagcaata---ctgccgagccc-gcgctggccgttgtcttgaagtgggcgctcacc +caagatctattaatgataaccccaatgttctgcaccggtgctttcttcgcccggttggaagagacgtccagc +gctggtattctgcccccactcgtggtccagcggctaactgccgccgttctgcgctacgcggtttgccccctg +tcgaccgcacgtattgcttcgacgggttctcccgctgtgcctttgccgctgagaccgggatcgctttgtact +cactgcatgacctctggccctcggatgtagcggaggccatggcccgccatgggatgacgcgcttgtatgctg +ccctccaccta-ccccctgaggttctgttaccaccaggaacttaccacacaacttcctatcttctgattcac +gacggcaatcgtgccgtcgtgacttatgagggggatactagtgcgggttataaccacgatgtgtctatactt +cgtgcatgggttcgcaccactaaaatagttggtgaccacccgctggtaatagagagggttcgcgccatcggc +tgccattttgtcttactccttactgcagcccccgagccgtccccaatgccttatgttccgtaccctcgttca +acagaggtgtacgttagatccatatttggccctggc---------gggtcgccttctcttttcccatcagcc +t----------gctccaccaagtcta-cattccatgccgtcccggtccatatctgggaccggcttatgcttt +ttggtgccaccttagatgaccaggccttttgctgctcgcggcttatgacttacctccgcgggattagctata +aagtgaccgttggtgcacttgtcgccaacgaaggctggaatgcctcggaagatgcactaaccgctgtgatta +ctgcagcgtacttgactatttgtcatcagcgctacctacgaacacaggccatttctaaaggcatgcgtcggc +ttgaggttgagcacgctcaaaaatttattacaaggctatatagctggctgtttgaaaagtc---------ag +gccgtgattacatccccggccgccagctccagttttatgcgcagtgccgccgttggctctcggctggcttcc +atctagaccctagagttctcgtctttgacgaggcggtcccctgc---cgatgccggagcttcctaaagaa-- +----ggtcgctgggaaattttgttgctttatgaagtggttggggcagga------gtgcacctgttttttgg +----------------agccagcggaaggcctggttggggactgtggc--------catgataatgaggctt +atgaggggtctgaggtggaccccgccgagtctgctcatcctgatatttctggtacttatgcggtccacggtc +gccagcttgaggccctatacagagcacttaatatcccagatgacattgtagctcgtgcatcacgtctgacgg +ccaccgtggagcttgccgccagcccaggcagactcgagtgccgtacggtgcttgggaataagacttttcgta +catcaataactgatggtgcccatctcgaggccaacggtcc------------------------tgagcagt +acgttttgacattcgatgattctcgccaagtgatgggggctgggcctcacagcctcacgtatgaacttgtcc +ctgccggtctacaggttaaaatatcttct-------aatggcttggattgtaccgttacattccct---cct +ggtggtgcgccgagcgctgcaccaggtgaagtggcggctttctgcagcgctttatacaggtacaataggttc +acccagcgccattcgttgaccggtgggctgtggctgcaccctgaggggctccttggcctgttccctcctttt +tccccggggcatctttgggagtctgcaaaccccttctgcggtgagagcacactttatacgcgaacttggtct +acatctggtttctctagcgacttctctccacccgaggcggcttatgtcgccccagcccctgacat----gag +gttgccctcgggtgccccctcctccgctagtgatat-----------------ttgggtgtt---------- +---------tccaccaccc----tctgaggggt--------------tggcggtcattccgccacccgtaac +tccggtcggtaagctaactaa---------------------------------------ttcgcc------ +------------------------------------------------------------------------ +-tggtcgtac-------------------------------------------------------------- +-------------tacacct----aggccgtctgcccgtgagccgtctacatcattatcggccctaactcca +g---------------------------------------------tcggtaagccagctaacctgtctagc +ctcactgcacctaag-------------------------------------ccccccgttcgcgagccgcc +tacaccgtc--------------------------------------accggcccgcgctcgtcggc----- +-------------------ttctttatacatatcctgatggggctaaggtgtatgcaggctctttgtttgag +tctgattgttactggcttgtcaatgcatctaatcctggccaccgtcctggtggtggtctctgccatgcattc +taccagcgctttccagagtcgt------ttcatccggccgattttgtcatgcgtgaagg---tctcgccgca +tacaccttgagcccgcgtccgatcatccatgctgtggcccccgactacagggtcgagcagaaccccaagagg +ttggaggcggcataccgtgagacctgctcccgcctcggcacagctgcttacccgctactggggtcggggatt +taccaggtccctgtaggtctaagctttgacgcctgggagcgtaatcaccgcccaggcgatgagctttacctt +actgagccagctgccgcc-------------------------------------------------tggtt +tgaggctaataagcctaccca--------------------------------------------------- +------------------------------------------gccagccctaacaatcactgaggacaccgc +cc------------gcacggccaaccttgcgcttgagatcg------------acgccgctactgaggtagg +tcgtgcttgt---gccggctgcactattaaccccgggattgtccactaccagttcaccgccggggttcctgg +ctccgggaagtctaggtctatacagcagggggatgtcgatgttgtggtcgtaccaactcgcgagctccgtaa +cagttggcggcgtcgtggctttgctgcttttacacctcacacagcagcccgtgttactgccggccggcgtgt +ggtgatagatgaagcaccttctcttccgccgcacctgctgttgctccatatgcagcgggcctcatcagtcca +tcttcttggtgaccctaatcagatccctgccattgattttgagcatgccggtctggtcccggcaattcgccc +tgagctagcccctactagttggtggcatgtcacccaccgttgccccgccgatgtgtgtgaactcatacgcgg +ggcttacccaaagattcagacgaccagccgtgtgttgagatctctattttggaacgag------cctgcgat +aggtcagaggttggttttcacgcaggcagccaaggccgctaatcccggtgcaattaccgtccacgaggccca +gggggccacgtttaccgagactaccatcatagctacggccgacgctagaggtcttatccagtcttcccgcgc +acatgccatcgttgcactcactcgccatacagaaaagtgcgttattctcgacgcccctggcctgttgcgtga +ggtcggcatttctgatataattgttaataacttt------------------------------tttctggc +tggtg--gagaggtgggccaccaccgcccttccatcatcccccgcggcaatccagaccagaacttagacac- +-----cctccaagcgttccctccatcctgccaaattagtgcttaccaccagttggctgaggagctgggccac +cggccggccccagtggccgccgtcttgcccccttgccctgagcttgaacaggggttactctacatgccgcag +gagctcacggtgtccgatagtgtcttaatttttgaactcacggatatagttcactgtcgtatggctgcccca +agtcagcgtaaggcggttctttctacactcgttggcaggtacggccgtcgaacgaagctgtatgaagcggcc +cattctgatgtccgtgagtctctagggaggttcatccctactatcggaccggtccaggccaccacttgtgag +ttatatgagctggttgaggccatggtggagaagggccaggatgggtccgctgtgcttgagcttgacctctgc +aatcgtgatgtctcgcgtattacatttttccagaaggattgcaacaaattcactacaggtgagactattgcc +catggtaaggtgggccagggcatttcggcttggagtaaaaccttctgtgctttatttggcccatggttccgt +gccattgagaaggagattctggctctactcccacccaatattttctatggcgatgcctatgaggagtcagtg +ttctctgcagccatttctggggctggctccagtatg---gtctttgagaatgatttttctgagtttgatagc +acccaaaataatttctctct------------------tggccttgagtgcgttattatggaggaatgtggc +atgccccaatggcttatccgactgtaccatttagttagatcagcctggatcctgcaagccccgaaagagtct +ttaaaaggcttctggaagaagcactccggtgagcctggcactctcctttggaacaccgtctggaacatggcg +atcatagcgcactgctatgaattccgtgacctgaaagtggcggcgtttaaaggggatgattcagtggttctt +tgcagcgattaccgtcagagtcgtaatgcggccactctgatagccggttgtgggttgaaattgaaggttgac +taccggcctattggtttgtatgccggtgttgtagttgctccgggcctcggggcactaccggatgttgtccgc +tttgcaggtcgattatctgagaagaattggggtccgggccccgagcgcgccgaacagttgcgcctagcagtt +tgtgatttccttcgagggttgacgaatgttgcacaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagtcccgggctggtgcataaccttattggcatgctacagactattgctgatggaaaggcccattt +tactgagactgttaagcctgtgctggatcttacaaattctatcatacagaggttagaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggttc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaatccggggctggagctcgcccta +gacagccggcccg---------------ccccctcggttcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctgac +tgctgtttcaccagcgcctgatacggccccagtccctgatgttgattcacgtggcgctatcctgcgccgaca +gtataatctgtccacctctcctttaacttcatctgttgcctctggaactaatctcgttttgtatgctgcccc +gcttaacccccttctgccccttcaagacggcaccaatactcatatcatggcgactgaggcgtctaactacgc +tcagtatcgggttgtccgggctacaatccgctaccgccctttggtgccgaacgccgtcggcggttatgcaat +ttctatttctttctggcctcagactacaactacacccacctctgttgatatgaactccattacttctactga +tgttaggatcttagttcagccaggcatagcctctgagttggtcatcccgagtgagcgccttcactatcgtaa +tcagggctggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggcttggtcatgctttg +tatccatggctcccctgttaattcttacaccaacacgccctacactggggcattggggctccttgattttgc +actcgagcttgaattcagaaatttgacccctgggaacactaacacccgtgtgtcccgttacactagcacagc +ccggcaccgcctgcgccgtggtgccgatgggacggctgagcttacaaccactgcagccacacgttttatgaa +ggacttgcatttta---ccgggacaaat---ggtgtgggtgaggtgggtcgtggtatagctctaacgctatt +taatcttgctgatacacttctcggtgggttgccgacagaattgatttcgtcggctggaggtcaactgtttta +ctcccgcccggttgtctcagccaatggcgagccagccgttaagttatacacctctgtcgagaatgcacagca +ggataagggtattgctataccacacgatatagacttaggggactcccgtgtggttatacaagactatgacaa +ccaacatgaacaggaccggcctaccccgtcaccggccccatcccgtcccttttcagtccttcgggccaatga +tgtcctgtggctctc-----------------------------tttgactgcagctgagtatgac------ +cagactacttatggctcgtcaaccaatcctatgtatgtttcagacactgtcacatttgt---taatgtggcg +acaggcgctcaggctgttgcccgatcccttgactggtccaaggtcactttggatggccggccacttactacc +at-----ccagcagtactctaagacattttatgtgt-tgccgctccgtggcaagctttccttttgggaagct +ggcacgactaag--gctggctacccttacaattacaacactactgctagtgaccagattctgattgagaatg +cagccggccac------cgtgttgctat-atctacttatactactagtcttgg--------------cgccg +gccctgtgtctgtctc-tgcagtcggcgtccttgctccgcactctgccttagctgtgcttgaagatactatt +gatt---------accccgcccgcg----cccatactttcgatgatttctgccctgagtgccgcaacc---t +cggcctgcagggctgtgcctttcagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattat-tt----cc-ccc--ctt------gt +accc-cct--------tc-cc-a-attat----gc-tt-tgt------------------at-t-------c +ttttttct----ggg---------------ttcc--cgctcccga---------------------agaaaa +aaaaaa----------------aaaa---------------------------------------------- +---------------------------------------------gaaaa---------------------- +------------------------------------------------------------------------ +----------- +>MW355262.1/17234/1-7234 |Hepeviridae isolate HESQL021, complete genome +-----------------------------------------dr-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcatcactactgccattgag---caagctgctctggc +cgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagctggttttccgacctgaagtgctttggaatcatcctatccaacgggt +tattcataatgagttagaacagta---ctgccgggccc-gggctggtcgctgtttagaggttggggcccatc +caagatccatcaatgacaacccgaatgttttgcatcgctgcttcctacgaccagttggcagagatgttcagc +gttggtattctgctcctacccgtggccccgcggccaactgccgccgctctgctttgcgtggcctcccacccg +ctgaccgcacctactgttttgatggattctctcgctgcccgtttgctgcggagactggtgttgccctctact +cattgcatgacctctggccggccgatgttgcagaggccatggcccgacatgggatgacacgcttatatgctg +cactacacctc-ccccctgaagtattactaccacctggtacttaccacacaacttcataccttcttattcac +gatggcaatcgtgccgttgtgacttatgagggtgacactagtgcaggttacaaccatgatatttctatactc +cgcgcatggatccgcacaactaagatagttggcgaccatccgctggtgatagagcgtgtgcgggctattggc +tgccactttgtgttgctgctcactgcggcccctgagccgtcaccaatgccttatgttccatacccccggtcg +acagaggtgtatgtccgttccatatttggccctggc---------gggtccccgtccctgtttccatcagct +t----------gctctacaaaatcca-cattccatgccgtcccagttcatatttgggaccggctcatgctct +ttggtgccaccctggacgatcaggcgttttgctgytcacggcttatgacttaccttcgcgggattagttaca +aggttaccgtaggtgcccttgttgctaatgaggggtggaacgcttcggaggacgctcttaccgctgttatca +ccgcagcgtacttgaccatttgtcatcagcgttacctccgcactcaagccatatccaagggcatgcgccggc +tggaggttgagcatgctcaaaaatttatcacaagactctatagttggctgtttgagaagtc---------tg +gccgtgactacatccccggccgtcagctccagttctatgcacagtgccgccgttggttatcggcgggtttcc +acctcgacccaagggtgcttgtttttgacgagtccgctccctgc---cgttgtaggacgtttcttaagaa-- +----ggttgcaggtaagttctgttgttttatgaagtggctggggcagga------gtgcacctgcttcctgg +----------------aaccagctgagggcctggttggtgaccgtggc--------cacgataatgaagcct +atgagggttctgaggttgatcaggccgagcccgcccatcttgatgtctctgggacttatgccgtccatggga +gccagctcgaagctctgtacagggcgcttaacatcccgcatgatattgccgctcgagcctcccgtttaactg +ccactgttgaacttactgcaggcccagaccgtttggagtgtcgcactgtgctcgggaataagaccttccgga +caacggtggttgatggcgctcatcttgaggcgaatggccc------------------------tgagcagt +atgtcctctcgttcgatgcctcctgccagtctatgggggccgggccgcataacctcacctatgagctcaccc +ctgctggtttgcaggttaagatttcatct-------aatggcctggactgcactgcaacattcccc---ccg +ggcggagcccctagtgcagctccgggggaggtagcagctttttgcagtgccctctataggtacaacaggttt +acccagygccattcgcttacaggtggtttgtggctgcatcctgaggggctattgggcatcttccctcctttc +tcccccgggcatctttgggagtccgctaaccctttttgtggggagggaactttgtacacccggacttggtca +acatctggtttttctagtgatttttctccccctgaggcggctgccgctgtgccggccgctgccac----agg +gtttcccc---accctacaacccctgttagtgacat-----------------ttgggtgct---------- +---------gccgccaccc----tctgaggggt--------------ctcaggttgatgcagcgcctgctcc +tctag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tccctgagcctgttcaaccgcctggc +cctgctaggccgttg-------------------------------------gcccccgtgtgtaagccacc +aacaccgcc--------------------------------------acctccgcgtacccgccgcc----- +-------------------tcctctacacttacccggatggggcgaaggtgtatgcggggtcactgtttgag +tcagactgtgattggctggttaatgcgtcgaatcccggccatcgccccggaggtggcctttgccatgctttt +taccaacgctaccccgagtcgt------tccacccaactgagttcattatgcgcgatgg---tcttgccgca +tatactttgactccccggcctattatccatgcggtggctcccgattatagggttgagcagaacccgaagagg +ctcgaggcagcataccgagagacttgctcccgccgtggcaccgccgcctacccactcctcggctcaggtata +taccgagttcccgttagcctcagctttgacgcttgggagcgtaaccatcgccccggggacgagctttacttg +accgacctcgccgctacc-------------------------------------------------tggtt +cgaggccaacaagccagcaca--------------------------------------------------- +------------------------------------------accggcccttacaataactgaagatacagc +cc------------gtacagccaacctagcactagagatcg------------acgctgctacggaggttgg +ccgggcttgc---gccggttgtacagttagccctggggttgtgcactatcaatttactgccggggttccagg +ttcggggaagtcgcggtctatacagcaaggggacgttgatgtggtggttgtccccactcgggagcttcggaa +tagttggcgccgccggggttttgcagctttcacgcctcacactgcggcccgcgttaccacgggccgtcgtgt +cgtgattgatgaggccccatcccttccaccgcacctcctgcttttacacatgcagcgggcctcgtcggtcca +ccttctcggcgacccaaatcagattcccgccatagactttgagcatgccggtttggtccccgcaatacgccc +cgagcttgcacccaccagctggtggcatgttactcaccgctgccccgctgatgtatgcgagcttatacgcgg +ggcctaccccaaaattcagactactagccgcgtgttgcggtctttattctggaatgag------cctgccat +tggccagaagttagtctttacacaggccgctaaggctgccaaccccggtgcgattacagttcatgaggccca +aggcgccactttcacggagactacaattatagccacggccgatgccagggggctcatccaatcatcccgagc +tcacgccatagtcgcacttacccgccacacagagaagtgcgttatccttgatgcccccggtttgttacgtga +ggttggtatatctgatataattgttaacaatttc------------------------------ttcctcgc +cggtg--gggaagtgggccaccaccgcccctctgtgataccccgcggcaatcctgaccagaacctcgcgac- +-----attacaggcttttccaccttcctgtcagatcagtgcttatcatcagttagctgaggagctgggccac +cgcccggcccccgtcgctgctgtcctgcccccctgccccgaactcgagcagggcctgctgtatatgccacaa +gagctcacggtgtctgatagcgtgttggtctttgagctcacggacatagttcattgccggatggctgcccct +agccagcggaaggctgtcctatcgacgctcgtaggtaggtatggccgccggacgaagttgtatgaggcggct +cactccgatgtccgtgagtccctgacaagattcatccccaccatcgggcccgttcaggcaactacgtgtgag +ctatacgaactggttgaggccatggtggacaagggccaggacggctctgccgtacttgagcttgatctttgt +aatcgtgatgtatcgcgtattacattcttccagaaggactgtaacaagttcaccacaggggagaccattgcc +cacggtaaagtcggccagggcatctcggcctggagcaagaccttctgtgccctctttggcccgtggttccgt +gctattgaaaaagaaatattggccctgctcccgcccaacatcttttacggcgatgcatatgaagagtctgtg +tttgctgccgccgtgtctggggcaggatcatgcatg---gtatttgagaatgatttttcagagtttgatagc +actcaaaataatttctccct------------------cggccttgagtgtgtagtcatggaggaatgcggt +atgccccagtggctaattcggttgtaccacttggttcggtcagcctggattctacaggcgccgaaggagtct +cttaaaggtttctggaagaagcattctggtgagcccggcaccctcctttggaacaccgtttggaatatggcg +atcatagcacactgctatgagtttcgtgatcttagggttgccgccttcaagggagatgattcggtggtcctc +tgtagcgactaccgtcaaagccgtaatgcggcggccctgattgctggttgcgggctcaaactgaaggttgat +taccgccctatcgggttgtatgccggtgtggtggtggcccccggcctggggacactacccgatgtagtgcgc +tttgccggtcggctgtctgagaagaactggggccctgggccggagcgggccgagcagctgcgtcttgctgtt +tgtgattttcttcgagggctgacgaatgttgcgcaggtatgtgttgatgttgtatcccgag-------ttta +tggggttagccctgggctggtacataaccttattggcatgttgcaaaccattgctgacggtaaggcccattt +tacagagactgttaaacctgtgcttgatctcacgaactctattatacagcgggtggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagtcgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccaccgatgtcatttcgcaacccggggctggagctcgccctc +gacagccgtcccg---------------cccccttggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccacgtcgtcgacctgcccca---------actggggctgcgccgctgac +tgctatatcacctgctcctgatgcggcccccgtgcctgatgttgattctcgtggcgctatactgcggcgcca +gtataatttatctacatccccactcacatcatctgttgcttcgggtaccaatctggttctttatgctgcccc +gctaaatcccttgttacctcttcaggatggcactaacactcacatcatggctactgaggcgtccaattatgc +ccagtatcgggttgtccgagctacgatccgttacaggccgttggtgccgaatgctgtcggtggctatgcaat +ctccatctcattttggcctcagactaccaccacccctacgtctgttgacatgaattctattacctccactga +tgttaggatcctagttcagcccggtattgcctccgagctagttattcctagtgaacgcctccactaccgtaa +ccaaggttggcgctctgtggagacctcgggtgtggccgaggaggaggccacttctggtttggttatgctatg +cattcatggttcccccgttaactcctacaccaataccccctatactggggcgcttgggctccttgactttgc +tttagagcttgagtttaggaacttgacacccgggaacaccaacacccgtgtttcccggtatacaagcactgc +ccgtcatcggctgcgccgcggcgccgatggcaccgctgagcttaccaccacagcggctacacgttttatgaa +ggacttgcacttca---ccggtacgaat---ggggtcggtgaggtgggccgtggtattgctcttacactctt +taatcttgctgatacgctcctcggtggtttgccgacagaattaatttcgtcggctggggggcagttgttcta +ttcccgccccgtcgtctcagccaatggcgagccggctgttaagttatacacatctgtggagaacgcgcagca +ggataaagggattgctattccacatgacatagacttaggtgactctcgtgtggttattcaagattatgataa +tcagcacgagcaggaccggcccaccccttcgcccgccccatctcgccctttttcggttcttcgtgctaatga +tgtcctttggctttc-----------------------------tcttaccgccgccgagtatgac------ +cagactacatatgggtcttccaccaacccaatgtatgtctcagatactgtcacatttgt---caacgtggcc +acaggggcccaggctgttgctcgctctcttgactggtctaaagttaccctagatggccgtccccttactacc +at-----tcagcagtactctaaaacattttatgttc-tcccgcttcgcgggaagttgtccttttgggaggct +gggacaactaaa--gctggatacccttataattataacacgactgctagtgaccagattttaattgaaaatg +cagctggtcac------cgtgttgccat-ctctacttatactaccagccttgg--------------cgctg +gccctgtgtcaatttc-tgcagttggtgtgttagccccccattcggcccttgcagttcttgaggatactact +gact---------accctgctcgcg----cccatacttttgatgatttctgtccggagtgtcgtgccc---t +tggcttgcaggggtgtgccttccagtc--------tactaatggtgaacttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattaa-tt----t--tcct-ttt------gg +gccc-cct--------tc-caaa-tttct----gc-tt---t-----------------att-t-------c +tttttttc----gg----------------ggttccccgcccccc---------------------gaaaaa +aaaaaaa---------------aaaaaaaagg---------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355263.1/17335/1-7335 |Hepeviridae isolate HESQL008, complete genome +------------------------------------------g-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcatcactactgccattgag---caagctgctctggc +cgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tatcaatttgatgcaaccccggcagctggttttccgacctgaagtgctctggaatcatcctatccaacgggt +tattcataatgagttagaacagta---ctgccgggccc-gggctggtcgctgtttggaggttggggcccacc +caagatcgatcaacgacaacccgaatgttttgcatcgctgcttcctacgaccagttggcagagatgttcagc +gctggtattctgcccctacccgtggccctgcggccaactgccgccgctccgctttgcgtggcctcccacccg +ctgaccgcacctactgttttgatggattttctcgctgcccgtttgctgcggagactggtgttgccctctatt +cattgcatgacctctggccggccgatgttgcagaggccatggcccgacatgggatgacacgtttatatgctg +cactacatctc-ccccccgaagtgttactaccgcctggtacttaccacacaacttcataccttcttattcac +gacggcgatcgtgccgttgtgacttatgagggtgacactagtgcaggttacaaccatgatgtctctatactc +cgcgcatggatccgcacaactaagatagttggcgaccatccgctggtgatagagcgtgtgcgggctattggc +tgccactttgtgttgctgctcactgcggcccctgagccatcaccaatgccttatgttccatacccccggtcg +acagaggtgtatgttcgttccatatttggccctggc---------ggatccccgtccctgtttccatcagct +t----------gctctacaaaatcca-catttcatgccgtcccagttcatatctgggaccggcttatgctct +ttggtgccaccctggacgatcaggcgttttgctgctcacggcttatgacttaccttcgtgggattagttaca +aggttactgtaggtgcccttgtcgctaatgaagggtggaacgcttcggaggacgcccttaccgctgttatca +ccgcagcgtacttgactatttgccatcagcgttacctccgtactcaagccatatccaagggcatgcgccggc +tggaggttgagcatgctcaaaaatttatcacaagactctatagttggctgtttgagaagtc---------tg +gccgtgattacatccccggccgtcagctccaattctatgcacagtgccgccgctggttatcggccggtttcc +acctcgacccaagggtgcttgtttttgatgagtctgctccctgc---cgttgtaggacgtttctcaagaa-- +----ggttgcaggtaagttctgttgttttatgaagtggctggggcagga------gtgcacctgcttcctgg +----------------gaccagctgagggtctggttggtgaccatggc--------cacgataatgaagcct +atgagggttctgaggttgaccaggccgagcccgcccatcttgatgtttctgggacttatgccgtccatggga +gccaactcgaggccctgtacagggcgcttaacatcccgcacgatattgccgctcgagcctcccgtttaactg +ccactgttgaacttactgcaggcccagaccgtttggagtgtcgcactgtgctcgggaataagaccttccgga +caacggtggtcgatggtgctcatcttgaagcgaatggccc------------------------cgagcagt +atgtcctttcgttcgacgcctcctgccagtctatgggggccgggccgcataacctcacctatgagctcactc +ctgctggtttgcaggttaagatttcatct-------aatggcctggattgcactgcaacattcccc---ccg +ggtggagcccctagtgcagctccgggggaggtagcagctttttgcagtgccctctacaggtacaacaggttt +acccagcgccattcgcttacaggcggtttgtggctgcatcctgaggggctattgggcatcttcccccctttt +tcccccgggcatctttgggagtccgctaatcctttttgtggggagggaactttgtacacccggacttggtca +acatctggtttttctagtgatttttctccccctgaggcggctgccgctgtgccggccgctgccac----agg +gttgcccc---atcctacaacccccgttagtgacat-----------------ttgggtgct---------- +---------gccgccacct----tctgaggggt--------------ctcaggttgatgcagcgcctgcttc +tctag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tccctgagcccgttcaaccgctcggc +cttgttaggccgaag-------------------------------------gcccccgtgtgtaagccacc +aacaccacc--------------------------------------acctccgcgtacccgccgcc----- +-------------------tcctctacacttatccggatggggcgaaggtgtatgcagggtcactgtttgag +tcagactgtgattggctggtcaatgcgtcgaatcccggccatcgtcccggaggtggcctttgccatgccttt +taccaacgctaccccgagtcgt------tccacccaactgagtttattatgcgtgatgg---tcttgccgca +tatactctgactcctcggcctattatccatgcggtggctcccgattatagggttgagcagaacccgaagagg +cttgaggcagcataccgagagacctgctcccgccgtggcaccgccgcctacccactcctcggctcaggtata +taccgagttcccgttagtctcagctttgatgcttgggagcgtaaccaccgtcccggggatgagctttacttg +accgacctcgccgctacc-------------------------------------------------tggtt +cgaggccaacaagccagcaca--------------------------------------------------- +------------------------------------------accggccctcacaataactgaagatacagc +cc------------gtacagccaacctagcactagagatcg------------acgctgctacggaggttgg +ccgggcttgt---gccggttgtacagttagccctggggttgtgcactaccaatttaccgccggggttccagg +ttcggggaagtcgcggtctatacagcaaggggacgttgatgtggtggttgtccccactcgggagcttcggaa +tagttggcgtcgtcggggttttgcagctttcacgcctcacacggcggcccgcgttaccacgggccgtcgtgt +cgtgattgatgaggccccatcccttccgccgcacctactgcttttacatatgcagcgggcctcgtcggtcca +ccttctcggcgacccaaatcagatccccgctatagactttgagcatgctggtctggtccccgcaatacgccc +cgagcttgcacccaccagctggtggcatgttacccatcgctgccccgctgatgtgtgcgagcttatacgcgg +agcctatcccaaaatccagactactagccgcgtgctgcggtctttattctggaatgag------cctgccat +tggccagaagttagtctttacacaggccgctaaagctgccaaccccggtgcgattacagttcatgaggccca +gggtgccactttcacggagactacagttatagccacggccgatgccagggggctcattcaatcttcccgagc +tcatgccatagtcgcacttacccgccacacggagaagtgcgttatccttgatgcccccggtttgttacgtga +agttggtatatctgatataattgtcaacaatttc------------------------------ttccttgc +cggtg--gggaagtgggccaccaccgcccctctgtgataccccgcggcaatcctgaccagaacctcgcgac- +-----attacaggcttttccaccttcctgtcagatcagtgcttatcatcagttagctgaggagctgggccac +cgcccggcccccgtcgctgccgtcctgcccccctgccccgaactcgagcagggtctgctgtatatgccacaa +gagctcactgtgtctgatagcgtgttggtctttgaactcacggacatagttcattgccggatggctgctcct +agccagcggaaggctgtcctatcgacgcttgtaggtaggtatggccgccggacgaagctgtatgaggcggct +cactccgatgtccgtgagtccctgacaagattcatccccaccatcgggcccgttcaggcaaccacgtgtgag +ttatacgaactggttgaggccatggtggataagggtcaggacggctctgccgtacttgagcttgatctctgc +aatcgtgatgtgtcgcgtattacatttttccagaaggattgtaacaagttcaccacaggggagaccattgcc +cacggtaaggtcggccagggcatctcggcttggagcaagaccttctgtgccctctttggcccgtggttccgt +gctattgaaaaagaaatactggccctgctcccgcccaacatcttctacggcgatgcatatgaagagtctgtg +tttgctgccgccgtgtctggggcaggctcatgcatg---gtatttgagaatgatttttcagagtttgatagc +actcaaaataatttctccct------------------cggccttgagtgtgtagtcatggaggaatgcggc +atgccccagtggctaatccggttgtaccacttggttcggtcagcctggattctacaggcgccgaaggagtct +cttaaagggttttggaagaagcattctggtgagcctggcaccctcctctggaacaccgtttggaatatggcg +atcatagcacattgctatgagtttcgtgatcttagggttgccgccttcaagggagatgattcggtggtcctc +tgtagtgactaccgtcaaagccgtaacgcggcggccctgattgcaggttgcgggctcaaattgaaggttgat +tatcgccctatcgggttgtatgctggtgtggtggtggcccccggcctggggacgctacccgacgtagtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggccgagcagctgcgtcttgctgtt +tgtgattttcttcgcgggctgacgaatgttgcgcaggtatgtgttgatgttgtatcccgag-------tgta +tggggttagccctgggttggtacataaccttattggcatgttgcaaaccattgctgatggtaaggcccattt +tacagagactgttaaacctgtgcttgacctcacgaactctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgtgccctagggctgttct +gttgctgttcctcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagtcgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccaccgatgtcacttcgcaacccggggctggagctcgccctc +gacagccatcccg---------------ccccctcggcacctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccacgtcgtcgacctgcccca---------actggggctgcgccgctgac +tgctatatcacctgctcctgatgcggcccccgtgcctgatgttgattcccgtggcgctatattgcggcgcca +gtataatttatctacatccccactcacatcatccgttgcctcgggcaccaatctggttctttatgctgcccc +gctaaatcccttgttacctcttcaggatggcactaacactcacatcatggccactgaggcgtccaactatgc +ccagtaccgggttgtccgagctacgatccgttacaggccgctggtgccgaatgctgtcggtggctatgcaat +ctctatctcattttggcctcagactaccaccacccctacgtctgttgacatgaattctattacttccactga +tgttaggatcctagttcagcccggtattgcttccgagttagttattcctagtgagcgcctccactaccgcaa +ccaaggttggcgctctgtggagacctcgggtgtggccgaggaggaggccacttctggtttggttatgctatg +cattcatggttcccctgttaactcctacaccaataccccctataccggggcgcttgggctccttgactttgc +tctagagcttgagtttaggaacttgacacccgggaacaccaacacccgtgtttcccggtatacaagcactgc +ccgtcatcggctgcgccgcggcgccgatggcaccgctgagcttaccaccacagcggccacacgtttcatgaa +ggacctgcacttca---ccggtacgaat---ggggtcggtgaggtgggccgtggtattgctcttacactctt +taatcttgctgacacgctccttggtggtctgccgacagaattaatttcgtcggctgggggacagttgttcta +ttcccgccccgtcgtctcagccaatggcgagccggctgttaagttatatacatctgtggagaacgcgcagca +ggataaagggattgctattccacatgacatagacttaggtgactctcgtgtggttattcaagattatgacaa +tcagcacgagcaggatcggcccaccccctcgcccgccccatctcgccctttttcggttcttcgtgctaatga +tgttctttggctttc-----------------------------tcttaccgccgccgagtatgac------ +cagactacatatgggtcttccaccaacccaatgtatgtctcagatactgtcacatttgt---caacgtggct +acaggggcccaggctgttgcccgctctcttgactggtctaaagttactctagatggccgcccccttactacc +at-----tcagcagtactccaaaactttttatgttc-tcccgcttcgcgggaagctatctttttgggaggct +gggacaactaaa--gccggttatccttataattataacacgactgctagtgaccagattttaattgaaaatg +cagctggtcac------cgggttgccat-ctctacttatactaccaaccttgg--------------cgctg +gtcctgtatcagtttc-tgcagtcggtgtgctagccccacattcggctcttgcagtccttgaggatactact +gact---------accctgctcgcg----cccacacttttgatgatttctgcccggagtgtcgcgccc---t +tggtttgcaggggtgtgccttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattaa-tt----t--ttcc-ttt------gt +gccc-cct--------tc-aata-gtttt----ct-gt---ct---------------tatt-t-------c +ttttttct----gc----------------ggttcgcgccccccc---------------------ggaaaa +ataaaat---------------atgggggtgtgtgggcgagtagagttatttatacgtctgcggtgttctta +ctctgcgagcgatataccctactactagtcgtcccaccatactgaagtacacgcgac--------------- +-tct-------------------------------------------------------------------- +----------- +>MW355265.1/17262/1-7262 |Hepeviridae isolate HESQL131, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggtccggccgtttttatcccgtgttcaaactgatatcct +tattaacttgatgcaacctcggcaacttgtgttccggcccgaagtcctctggaatcacccgatccagcgagt +tatacataatgagctagagcagta---ctgccgagccc-gcgccggccgttgtcttgaagtgggcgcccacc +caagatctattaatgacaaccccaatgtcctgcaccgatgcttcctccgcccggttggaagagacgtccagc +gctggtattccgcccctactcgtggtccggcggctaattgccgccgttctgcgctacgcggtttaccccccg +tcgaccgcacgtactgcttcgacgggttctcccgctgcgcctttgccgctgagaccgggattgctttatatt +cattgcatgacctttggccttcggacgtcgcggaggctatggctcgccacgggatgacgcgcttgtatgctg +ccctccaccta-ccccctgaagttctgttgccacctggaacttaccacacaacctcctatcttctgattcac +gacggcagtcgcgccgtcgtgacctatgagggggatactagtgcgggctataaccacgatgtgtctatactt +cgtgcatggattcgcaccactaaaatagttggtgaccacccgctggtaatagagagggtccgcgccattggc +tgccattttgttttactccttactgcagcccccgagccgtccccaatgccttatgtcccgtaccctcgttca +acagaggtgtatgttaggtccatatttggtcctggc---------gggtcgccttcccttttcccatcagcc +t----------gctctaccaagtcta-catttcatgccgtcccggtccatatctgggaccggcttatgcttt +ttggtgccaccctagatgaccaggccttttgttgctcgcggcttatgacctacctccgcggaattagttaca +aagtgaccgttggcgcacttgtcgccaacgaaggctggaatgcctcggaggacgcgctaaccgctgtgatta +ccgcagcgtatttgactatttgtcatcagcgctacctacgaacacaggccatttctaagggcatgcgtcggc +tagaggttgagcacgcccaaaaatttatcacaaggctatatagctggttgtttgaaaagtc---------ag +gccgtgactacatccccggtcgccagctccagttttatgcgcagtgccgccgctggctctcggctggcttcc +atctggaccctagagttctcgtctttgatgaggcggtcccctgc---cggtgccggagcttcctaaagaa-- +----ggtcgccggaaaattttgttgctttatgaagtggttggggcagga------gtgcacttgttttttgg +----------------agccagcagaaggcctggttggtgactgtggc--------catgataacgaggcct +atgaggggtctgaggtggactccgccgagcctgctcaccttgatgtctccgggacctatgcggtccacggcc +gtcagcttgaggctctatatagagcgcttaatatcccagatgacattgcagctcgtgcgtcacgcctaacgg +ctaccgtggagctcgctgccagcccaggcagactcgaatgccgcacggtgcttgggaacaagatctttcgta +cgtcaataacggatggtgcccatctcgaggccaacggccc------------------------tgagcagt +atgtcttgacatttgacgattctcgccaagtgatgggggccgggcctcacagcctcacgtatgaacttgtcc +ctgctggtctgcaggttaaaatatcttcc-------aatggcctggactgtaccgccatatttcct---cct +ggtggggcgccgggcgccgcaccaggcgaagtggcggctttctgtagcgccctatacaggtacaataggttt +acccagcgccattcgttgactggcgggctgtggctgcaccccgaggggctccttggcctgttcccccctttc +tctccggggcatctttgggagtctgcaaaccccttttgcggtgagagcacactttacacacgaacttggtcc +acatctggtttttctagtgacttctccccacccgaggcgacttatgccgccccagtccctgacat----ggg +gctaacctcgggtgccccctcctccgctagtgatat-----------------ctgggtgtt---------- +---------tccgccgccc----tctgaggggt--------------cggcgatcattccgccacccataac +cccggtcggtaagccaactag---------------------------------------cccgcc------ +------------------------------------------------------------------------ +-tggccatgc-------------------------------------------------------------- +-------------tacacct----aggccgcccgtccgtgagccatccatatcattgccggccctaacccca +g---------------------------------------------ttagtaagccagctaatctgcctagc +cttgctgcacctagg-------------------------------------ccccccgtccgcgagccgcc +catgtcgcc--------------------------------------atcggtccgcactcgccggc----- +-------------------ttctttatacataccctgatggggccaaggtgtatgcaggctctctgtttgag +tcagattgttactggctggtcaatgcatctaaccctggccaccgccctggtggtggtctctgtcatgcattc +taccagcgcttcccagagtcgt------ttcatccgaccgattttgttatgcgcgaggg---tctcgccgca +tatactttgagcccgcgcccgatcattcatgctgtagcccctgactatagggtcgagcagaaccccaagagg +ttggaggcggcatatcgtgagacctgctcccgcctcggcacagctgcctacccactactggggtcagggatt +taccaggtccctgtaggtctaagctttgacgcctgggagcgtaatcaccgcccgggcgatgaactttacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggccaataagcctaccca--------------------------------------------------- +------------------------------------------gccagctctaacaattactgaggacaccgc +cc------------gcacagccaatcttgcgcttgagatcg------------actccgctactgaggtggg +tcgtgcctgc---gccggctgcactattaaccccgggattgttcactaccagttcaccgccggggttcctgg +ctccgggaagtctaggtctatacagcagggggatgttgatgttgtggtcgtgccaactcgcgagcttcgtaa +cagttggcggcgccgcggctttgctgccttcacacctcacacagcagctcgtgttactgccggcaggcgcgt +ggtgatagatgaagcaccttctctcccaccgcatctgctgctgctccatatgcagcgagcctcatcagtcca +cctcctcggcgaccccaatcagatccctgccattgactttgagcacgctggtttggtcccggcgattcgccc +tgagttggcccctaccagctggtggcatgtcacccaccgttgccccgccgatgtatgtgagctcatacgcgg +ggcctacccaaagatccagacgaccagccgcgtgttgagatctctattttggaatgag------cctgcgat +aggtcagaagctggttttcacgcaggcagccaaagccgctaatcccggcgcaattaccgttcacgaagccca +gggggccacgtttactgagactactatcatagccacggccgacgctagaggtcttattcaatcttcccgcgc +acatgccatcgttgcactcactcgccacacagaaaagtgcgttattctcgatgctcctggcctactgcgtga +ggttggcatttctgatataattgtaaataacttt------------------------------ttcttggc +cggtg--gtgaagtgggccaccatcgcccttcaaccatcccccgcggtaacccagaccagaacttagacac- +-----cctccaagcgttccctccgtcctgccaaatcagcgcttaccaccagttggctgaggagctgggccac +cggccggccccagtggccgccgtcctgcccccttgccctgagcttgagcaggggttactttacatgccgcag +gagcttacagtgtccgatagtgtcctaattttcgagctcacggacatagttcactgtcgtatggccgcccct +agtcaacgtaaggcggttctctctacgctcgtcggcaggtacggccgccgaacgaagctgtatgaagcggcc +cattctgatgtccgcgagtctctagggaggttcatccctactatcggacaggtccaggccaccacatgtgag +ctatatgaactggttgaggccatggtggagaagggccaggacggttccgctgtgcttgagcttgacctttgt +aaccgtgatgtctcgcgcattacattctttcagaaggattgtaataaatttacaacaggtgagactattgct +catggtaaggtgggccaggggatttcggcttggagtaaaactttctgtgccctatttggcccatggttccgt +gccattgagaaggagattctggctctgctcccacctaatatcttttatggcgatgcctatgaggagtcagtg +ttctctgcggctatctctggggctggctccagtatg---gtttttgagaatgatttttctgagtttgacagc +acccaaaataatttctctct------------------cggccttgagtgcgttattatggaggagtgtggc +atgccccaatggcttatccgattgtaccatttagttagatcagcctggattctgcaagccccgaaagagtct +ctgaaaggcttctggaagaagcattccggtgagcctggcactctcctttggaacaccgtctggaacatggcg +atcatagcacactgctatgaattccgtgacctgagagtggcagcgtttaaaggggatgattcagtggtcctt +tgtagtgattaccgtcagagtcgtaatgcggccactctgatagccggttgtgggctaaaattgaaggttgat +taccggcctataggtttgtacgccggcgtcgtagtggctccgggcctcggggcgcttcctgatgttgtccgt +tttgcaggtcgattatctgagaagaattggggccccggtcccgaacgcgccgaacagttgcgcctggcagtt +tgtgattttcttcgagggctaacgaatgttgcgcaggtttgcgtcgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacagactattgctgatgggaaggcccattt +tactgagactgttaagcccgtgctggatcttacaaactctatcatacagaggttagaatgaataacatgtt- +c----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcatccgacgtcgtatcacaatccggggctggagctcgcccta +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtctcaccagcgcctgatacggccccagtccctgatgttgattctcgtggcgctatcctgcgccgtca +gtataatctgtctacctcccctctaacttcatctgttgcctctggaactaatcttgtcttgtatgctgcccc +gcttaacccactcctgcctcttcaggacggcaccaacactcatatcatggcaaccgaggcgtctaactacgc +tcagtatcgggttgtccgggctacaatccgctatcgccccttggtgccgaatgccgtcggtggttacgcaat +ttctatttctttctggcctcagactacaactacacccacctctgttgatatgaattctattacttctactga +tgtcaggattttagtccagcctggtatagcctctgagttggtcatcccgagtgagcgccttcattatcgtaa +tcaaggctggcgctctgttgaaacatcgggtgtggccgaggaggaggcgacatcaggcctggtcatgctttg +tattcatggctcccctgttaattcttataccaacacgccctatactggggcactggggctccttgattttgc +actcgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgttacactagtacagc +ccggcaccgcctgcgtcgtggtgccgatgggacagctgagcttacaaccactgcagccacacgttttatgaa +ggacttgcacttca---ccgggacaaat---ggtgttggtgaggtgggccgtggcatagccctaacgctatt +taatcttgctgatacacttctcggtgggttgccgacagaattgatttcgtcggctggaggtcaactgtttta +ctcccgcccggttgtctcagccaatggcgagccaactgttaagttatacacctctgtcgagaatgcacagca +ggataaaggtattgctataccacacgatatagacctaggggattcccgtgtggttatacaagactatgacaa +ccaacatgaacaggatcggcctaccccgtcgccggccccatcccgtcctttttcagtccttcgagccaatga +tgtcttgtggctctc-----------------------------tctgactgcagctgaatatgat------ +cagactacctatggctcgtcgactaatcctatgtatgtttcagatactgtcacatttgt---taatgtggcg +acaggcgcccaggctgtcgcccgatcccttgattggtccaaggtcaccttggacggccggccactcactacc +at-----ccagcagtactctaagacattttatgtgc-tgccgcttcgtggcaagctttccttttgggaagct +ggtacgactaag--gctggctatccttataattacaacactactgctagtgaccagattttgattgagaatg +cagccggccac------cgtgttgctat-atctacttatactactagtcttgg--------------cgccg +gccctgtgtctgtttc-tgcagttggcgtccttgctccgcactctgttttagctgtgctagaagacactatc +gatt---------accccgcccgtg----cccacacttttgatgatttttgccctgagtgccgtaacc---t +cggcctacagggctgcgctttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-t-c--ttt------gt +gccc-cct--------tc-taat-c----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355270.1/17184/1-7184 |Hepeviridae isolate HESQL109, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcatcactactgccattgag---caagctgctctggc +tgcggccaattctgccttggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagttggttttccgacctgaagtgctctggaatcatcctatccaacgggt +tatccataatgaacttgaacagta---ctgtcgagccc-gggctggccgctgtttggaggttggggcccacc +caagatccatcaatgataacccaaatgttttgcaccggtgcttcttacgaccagttgggagagatgttcagc +gctggtactctgcccctacccgcggccctgcagctaactgccgccgttctgccttgcgcggcctcccccctg +ttgatcgtacctactgttttgatggattctcccgctgctcatttgccgcagaaactggggttgctctttact +ctctgcatgacctctggccggctgatgttgcggaggctatggcccgtcacgggatgacacgcttgtatgctg +cactacatctc-ccccctgaggtactactaccacctggtacttaccatacaacctcataccttttgattcat +gacggagctcgtgctgttgtgacctatgaaggtgatactagtgcaggctacaaccatgatgtctccatactt +cgtgcttggatccgcacaactaagatagtcggcgaccatccgctggtgatagagcgtgtgcgggctattggc +tgccactttgtgctgttgctcactgctgcccctgagccatcaccgatgccctatgttccataccctcggtcg +acagaggtgtatgtccgctctatatttggccctggc---------gggtccccatccctattcccatcagct +t----------gctctacgaaatcca-catttcacgctgtcccggttcatatttgggaccggctcatgctct +ttggcgccactctggatgatcaggcgttttgttgttcacggcttatgacttacctccgcgggattagctaca +aggtcactgttggcgcccttgttgctaatgagggatggaatgcctcggaggacgctcttaccgctgttatta +ctgcagcatatttgaccatttgtcatcagcgttacctccgaactcaagctatatccaagggtatgcgccgac +tggaggttgagcatgctcaaaaattcattacaagactttatagttggctgttcgagaagtc---------cg +gccgtgactatatccccggccgccagctccagttttatgcacagtgccgccgttggttatcggcgggcttcc +atctcgacccaagggtacttgtttttgatgagtctgtgccctgt---cgttgtaggacatttcttaagaa-- +----ggctgtaggtaagttctgctgttttatgaagtggttgggacagga------gtgcacctgctttttgg +----------------aaccagtagagggtctagttggcgaccacggc--------catgataatgaagcct +atgagggctctgaagtcgatcaggccgagcctgcccatctcgatgtttccgggacttatgccgtccacggcc +gccaacttgaggccctgtatagggcgcttaatatcccgcatgacatcgctgcccgagcctcccgtttgactg +ccaccgtcgaactcgctgcaggcccagaccgcttggagtgccgcactgtgctcgggaataagactttccgga +cgacggtggttgatggtgcccatcttgaggcaaacggccc------------------------cgagcagt +acgtcctttcgtttgacgcctctcgtcagtctatgggggccggtccgcatagtctctcctatgagctcactc +ctgctggtctgcaggtcaagatttcatct-------aatggcctggattgcactgcaacattcccc---ccg +ggcggcgcccctagcgctgacccgggggaggtggcagccttctgtagtgccctttataggtataacaggttc +actcagcgccattcgcttgtaggcggcttgtggttgcaccctgaggggttgttgggtatcttcccccctttc +tctcccgggcacctttgggagtccgctaaccctttttgtggggagggaaccttgtacacccggacatggtca +acatctggtttttctagtgatttttcccctcctgaggcagccgttgcagtgccggctgctacccc----ggg +gccacgcc---gccctacacctcctgctagtgacat-----------------ttgggtgtt---------- +---------accgccacct----tctgaggaat--------------ttcaggttgacacaactcccgcccc +ccttg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagtctgctcaaccatctagc +cccgccgagccaaaa-------------------------------------actcccgtgcgtaagccgcc +aacaccacc--------------------------------------gccctcgcgcactcgccgcc----- +-------------------ttctttacacctaccctgatggggcaaaggtgtacgcagggtcactgtttgag +tccgactgtgactggttggtcaatgcgtcgaatcccggccatcgtcctggaggcggcctttgtcacgccttc +taccaacgctaccctgagtctt------tccacccaactgagttcattatgcgcgacgg---tcttgccgct +tacactttaactcctaggcccattatccatgcagtggctcctgattacagggttgagcataacccaaagagg +cttgaggcagcataccgagagacttgctctcgccgcggtaccgccgcctatccactcctcggctcgggcata +taccaagtccccgtcagcctcagctttgacgcctgggagcgtaaccaccgccccggggacgagctctaccta +accgacctcgctgctacc-------------------------------------------------tggtt +tgaagctaacaagccaacaca--------------------------------------------------- +------------------------------------------accggccctaacaataactgaggatgcagc +cc------------gcacagccaacctggcactggagatcg------------atgcagccacggaggtcgg +ccgggcttgt---gccggctgtgcagttagtcccggggttgtgcactatcggtttactgctggggtcccagg +ctcggggaagtcgcgttctatacagcagggggatgttgacgtagtggttgttcctactcgggagctccggaa +tagttggcgtcgtcggggttttgcagcttttacacctcatacggcggcccgcgtcaccacgggccgccgtgt +tgtgattgatgaggccccatccctcccgccgcatttgttgctactacacatgcagcgggcctcgtcggtcca +ccttctcggcgacccaaaccagatccccgccatagacttcgagcatgccggcctggtccccgctatacgccc +tgagctcgcgcccaccagttggtggcatgttacccaccgctgccccgctgacgtgtgcgagcttatacgcgg +ggcttaccccaaaatccaaaccactagccgcgtgctacggtctctattctggaatgag------cctgccat +tggccagaagttagttttcacccaggctgctaaggccgccaaccctggtgcgattactgtccacgaggccca +gggcgccaccttcacggaaactacaatcatagccacggctgatgctaggggtctcatccaatcttcccgagc +tcacgccatagtcgcacttacccgccacacagagaagtgcgttatccttgatgcccccggcttgttacgtga +ggttggtatatcggatgtgattgttaacaatttt------------------------------tttctcgc +cggcg--gggaggtgggtcatcaccgcccctctgtgatacctcgtggtaatcctgaccagaacctcgcgac- +-----attacaggcctttccgccctcctgccagattagtgcctatcaccagttagctgaggaacttggccac +cgcccagccctcgtcgccgctgtcttgcccccttgccctgaacttgagcaaggcttgttatacatgccgcaa +gagcttacggtgtctgatagcgtgctggtctttgaactcacggacatagttcactgccggatggctgccccc +agccagcggaaggccgtcctatcgacgctcgtgggtaggtacggccgtcggacgaagctgtatgaagcagct +cactctgacgtccgtgagtccctggctagatttatccccaccatcgggcccgttcaggcaactacgtgtgag +ttatatgagctggttgaggccatggtggagaaaggtcaggatggctctgccgtgcttgagcttgacctctgc +aatcgtgatgtatcgcgtatcacatttttccagaaagattgtaacaaattcaccacaggggagactattgcc +cacggtaaggtcggtcagggcatctcggcttggagtaagaccttctgcgccctgtttggtccgtggtttcgt +gctattgaaaaagaaatactagccctgctcccgcctaatattttctacggcgacgcatacgaggagtctgtg +tttgccgccgctgtgtcaggggcaggttcaagcatg---gtatttgagaatgatttttcagagtttgatagc +acccaaaataacttctccct------------------tggtctcgagtgtgtagtcatggaggaatgtggc +atgccccagtggttaatccggttgtaccatttggttcggtcggcctggattttacaggcgccgaaggagtct +cttaagggattttggaagaagcattctggcgagccaggcaccctcctctggaatactgtttggaacatggcg +atcatagcacactgctatgaatttcgtgattttagggttgccgctttcaagggggatgattccgtggtcctc +tgtagcgactaccgtcagagccgcaatgcagcggccctgattgcaggttgcgggctcaaactgaaggttgat +tatcgccctattgggttgtatgctggtgtggtggtggcccctggcctggggacgctacccgatgtggtgcgc +tttgccggccggctgtccgagaagaactggggccctgggccggagcgggccgagcagttgcgcctagctgtt +tgtgacttccttcgagggttaacgaatgttgcgcaggtgtgtgtcgatgttgtatcccgag-------ttta +tggggttagccctgggttggtacataaccttattggcatgttgcaaaccatagctgatggcaaggcccattt +tacagagactgttaaacctgtgcttgaccttacgaactctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------accaccatgcgccctagggctgttct +gttgctgttcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtaccgcaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgtgatcagtccca----------- +------gcgcccctccgctgtcccacgccgtcgatctgcccca---------gctggggctgcgccgctgac +tgccatatcacctgctcccgatacagcccccgtacctgatgttgactcgcgcggcgccatattgcgacgcca +gtacaatttatccacatccccgctcacatcatctgttgcttcgggtactaatctggttctttatgctgcccc +gctaaaccctttgctgccccttcaggatggcaccaacactcatatcatggccactgaggcatctaattatgc +ccagtatcgggtcgtccgagctacgattcgttacaggccattggtgccgaatgctgtcggcggttatgcaat +atccatttcattttggcctcagactactactactcccacgtctgttgatatgaactctattacttccactga +tgttaggattctagttcagcccggtattgcttctgagttggttatccccagtgagcgcctccattatcgcaa +ccagggctggcgctctgtggagacctcgggtgtggctgaagaggaggctacttctggtttggtaatgctttg +catccatggttctcctgttaattcctacaccaacaccccttataccggggcgcttggactccttgattttgc +cttagagcttgagtttaggaacctgacacctggaaacactaacacccgtgtgtcccggtatacaagcacagc +ccgtcatcggctgcgccgcggtgctgatggtaccgccgaacttaccaccacagcggccacgcgctttatgaa +ggacttgcacttca---ccggtatgaat---ggggtcggcgaggtgggtcgtggtattgctctcacactctt +taatcttgctgacacgcttctcggaggtttgccgacagaattaatttcgtcggctgggggacaattatttta +ctcccgccccgtcgtctcggccaatggcgagccgactgtcaagttatacacatctgttgagaatgcacagca +ggataaagggattgctattccacatgacatagatctgggtgactcccgtgtagtcatccaagactatgataa +ccagcatgaacaggatcgacccaccccctcgcctgccccttctcgccctttttcggttcttcgcgctaatga +tgttctatggctttc-----------------------------tcttactgccgccgagtacgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctccgatactgtcacatttgt---caacgtggct +acaggagcccaggccgtcgcccgttccctcgactggtctaaagttactctggacggccgccctcttactact +at-----ccagcagtattctaaaacattttatgttc-tcccgcttcgtgggaagttatctttctgggaggcc +gggacgactagg--gccggttatccctataattacaacacaactgctagtgatcaaattctgattgaaaatg +cggctggtcat------cgtgttgccat-ttccacctataccaccaacttggg--------------tgccg +gtcctgtgtctatttc-ttcagttggtgttttagccccacactcggcccttgcagtccttgaagatactatt +gact---------accccgcccgtg----ctcacacttttgatgatttttgcccggagtgtcgcgctc---t +tggcttgcaggggtgtgccttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattaa-tt----ttccttc---t------gt +gccc-cct--------tc-atag-ctttt----gc-tt---a----------------tta----------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355271.1/17163/1-7163 |Hepeviridae isolate HESQL035, complete genome +--------------------------------------------------------------ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcatcactactgccattgag---caagctgctctggc +cgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagctggtttttcgacctgaagtgttctggaatcatcctatccaacgggt +tattcataatgagttagaacagta---ctgccgggccc-gggctggtcgctgtttagaggttggggcccatc +caagatctatcaatgataacccgaatgttttgcaccgctgcttcctacgaccagttggcagagatgttcagc +gctggtattctgcccctacccgtggccctgcggccaactgccgccgctctgctttgcgtggcctcccacccg +ctgaccgcacctactgttttgatggattctctcgctgctcgtttgctgcggagactggtgttgccctctatt +cattgcatgacctctggccggccgacgttgcagaggccatggcccgacatgggatgacacgcttatatgctg +cactacatctc-ccccctgaagtattactaccacctggcacttaccacacaacttcataccttcttattcac +gacggcgatcgtgccgttgtgacttatgagggtgacactagtgcaggttacaaccatgatgtctctatactc +cgcgcatggatccgcacaactaagatagttggcgaccatccgctggtgatagagcgtgtgcgggctattggc +tgccactttgtgttgctgctcactgcggcccctgagccgtcaccaatgccttatgtcccatacccccggtcg +acagaggtttatgttcgttctatatttggccctggc---------gggtccccgtccctgtttccatcagct +t----------gctctacaaaatcca-catttcatgccgtcccagttcatatttgggaccgactcatgcttt +ttggtgccaccctggacgaccaggcgttttgctgctcacggcttatgacctaccttcgtgggattagttaca +aggttactgtaggtgcccttgttgctaatgaagggtggaacgcttcggaggacgctcttaccgctgttatca +ccgcagcgtatttgaccatttgtcatcagcgttacctccgcactcaagccatatccaagggcatgcgccggc +tggaggttgagcatgctcaaaaatttatcacaagactctatagttggctgtttgaaaagtc---------tg +gccgcgactacatccccggccgccagctccagttttatgcacagtgccgccgttggttatcggcgggtttcc +acctcgacccaagggtgcttgtttttgatgagtctgctccctgc---cgttgtaggacgtttctcaagaa-- +----ggttgcaggtaagttctgttgttttatgaagtggctggggcagga------gtgcacctgtttcctgg +----------------agccagttgagggtctggttggtgaccatggc--------catgataatgaagcct +atgagggttctgaggttgaccaggccgagcccgcccatcttgatgtttccgggacctatgccgtccatggga +gccaactcgaggctctgtacagggcgcttaacatcccgcacgatattgccgcccgagcctcccgtttaactg +ccactgttgaacttactgcaggtccagaccgtttggagtgtcgcactgtgctcgggaataagaccttccgga +caacggtggttgatggcgctcatcttgaggcgaatggccc------------------------cgagcagt +atgtcctctcgttcgacgcctcctgccagtctatgggggccgggccgcataacctcacctatgagctcactc +ctgctggtctgcaggttaagatttcatct-------aatggcctggattgtactgcaacattcccc---ccg +ggaggagcccctagcgcagctccgggggaggtagcagctttttgcagtgccctctataggtacaataggttt +acccagcgccattcgcttacaggcggtttgtggctgcatcctgagggactattgggcatcttcccccctttt +tctcccgggcatctttgggagtctgctaatcctttttgtggggagggaactttgtatacccgaacttggtca +acatctggtttttctagtgatttttccccccctgaggcggctgccgctgtgccggccgctgccac----agg +gttgttcc---accctacaacccctgttagtgacat-----------------ttgggtgtt---------- +---------gccgccacct----tttgaggggt--------------ctcaggttgatgcagcgtctgctcc +tctag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tccctgagcccgctcaaccgcccggc +cctgttaagccgaag-------------------------------------gcccccgtgtgtaagccacc +aacaccacc--------------------------------------acctccgcgtacccgccgcc----- +-------------------tcctctacacttatccggatggggcgaaggtgtatgcggggtcactgtttgag +tcagattgtgattggctggttaatgcgtcgaatcccggccatcgtcccggaggtggcctttgccatgctttt +taccaacgctaccccgagtcgt------tccacccaactgagttcattatgcgtgatgg---tcttgccgca +tatactctgactcctcgacctattatccacgcggtggctcccgattatagggttgagcagaacccgaagagg +cttgaggcagcataccgagagacctgctcccgccgtggcaccgccgcctacccactcctcggttcaggtata +taccgagttcccgttagcctcagctttgacgcttgggagcgtaaccaccgccccggggatgagctttatctg +accgacctcgctgctacc-------------------------------------------------tggtt +cgaggccaataagccagcaca--------------------------------------------------- +------------------------------------------accggcccttacaataactgaagatacagc +cc------------gtacagccaacctagcactagagatcg------------acgctgctacggaggttgg +ccgggcttgt---gccggttgtacagttagccctggggttgtgcactatcaatttaccgccggggttccagg +ttcggggaagtcgcgatctatacagcaaggggacgttgatgtggtggttgtccccactcgggagcttcggaa +tagttggcgccgccggggttttgcggctttcacgcctcacacggcggcccgcgttaccacaggccgtcgtgt +cgtgattgacgaggccccatcccttccgccgcacctactgcttttacacatgcagcgggcctcgtcggtcca +ccttctcggcgacccaaatcagatccccgctatagactttgagcatgccggtttggtccccgcaatacgccc +cgagcttgcacccaccagctggtggcatgttactcaccgctgccccgctgatgtgtgcgagcttatacgcgg +ggcctatcctaaaatccagaccactagccgcgtgctgcggtctttattctggaatgag------cctgccat +cggccagaagttggtctttacacaggccgctaaggctgccaaccccggtgcgatcacagttcatgaggccca +gggcgccacttttacggagaccacaattatagccacggccgacgctagggggctcatccaatcttcccgagc +tcacgccatagtcgcacttacccgccacacagagaagtgcgttatctttgatgcccccggtttgctacgtga +ggttggtatatctgatataattgtcaacaatttc------------------------------ttcctcgc +cggtg--gggaagtgggccaccaccgcccctctgtgataccccgcggcagtcctgaccagaacctcgcgac- +-----attacaggcttttccaccttcctgtcagatcagtgcttatcatcagttagctgaggagctgggccac +cgcccggcccccgtcgctgccgtcttgcccccttgccccgaactcgagcagggcctgctgtatatgccacaa +gagctcacggtgtctgatagcgtgttggtctttgaactcacggacatagttcattgccggatggctgcccct +agccagcggaaggccgtcctatcgacgcttgtaggtaggtatggccgccggacgaagctgtatgaggcggct +cattccgatgtccgtgagtccctgacaagattcatccccaccatcgggcccgttcaggcaactacgtgtgag +ctatacgaactggttgaggccatggtggataagggtcaggacggctctgccgtacttgagcttgatctttgc +aatcgtgatgtatcgcgtattacattcttccagaaggactgtaacaagttcaccacaggggagactattgcc +cacggtaaggtcggccagggcatctcggcttggagcaagaccttctgtgccctctttggcccgtggttccgt +gctatcgaaaaagaaatactggccctgctcccgcccaacatcttctatggcgatgcatatgaagagtcagtg +tttgctgccgccgtgtctggggcaggctcatgcatg---gtatttgagaatgatttttcagagtttgatagt +actcaaaataatttctccct------------------tggccttgagtgtgtaatcatggaggaatgcggc +atgccccagtggctaattcggttgtaccacttggttcggtcagcctggattctacaggcgccgaaggagtct +cttaaagggttttggaagaagcattctggtgagcccggcaccctcctttggaacaccgtttggaatatggcg +atcatagcacattgctatgagtttcgtgatcttagggttgccgccttcaaaggagatgattcggtggtcctc +tgtagcgactaccgtcaaagccgtgacgcggcagccctgatcgcaggttgcgggctcaaactgaaggtcgat +taccgccctatcgggttgtatgctggtgtggtggtagcccccggcctggggacgctacccgatgtagtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggccgagcagctgcgtcttgctgtt +tgtgattttcttcgagggctgacgaatgttgcgcaggtatgtgttgatgttgtatcccgag-------ttta +cggggttagccccgggctggtacataaccttattggcatgttgcagaccattgctgacggtaaggcccattt +tacagagactgttaaacctgtgcttgacctcacgaactctatcatacagcgggtggaatgaataacatgtc- +t----------------tgtgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcctcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagtcgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccaccgatgtcatttcgcaacccggggctggagctcgccctc +gacagccatcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccacgtcgtcgacctgcccca---------actggggctgcgccgctgac +tgctacatcacctgctcctgatgcggcccccgtgcctgatgttgattctcgtggcgctatattgcggcgcca +gtataatttatctacatccccactcacatcatccgttgcttcgggtaccaatttggttctttatgctgcccc +gctaaatcccctgttacctcttcaggatggcactaacactcacatcatggctactgaggcgtccaactatgc +ccagtaccgggttgtccgagctacgatccgttataggccgttggtgccgaatgctgttggtggctatgcaat +ttccatctcattttggcctcagaccactaccacccctacgtctgttgacatgaattctattacctccactga +tgttaggatcctagtccagcccggtattgcttccgagttagttattcctagtgaacgcctccactaccgtaa +ccagggttggcgctctgtggagacctcgggtgtggccgaggaggaggccacttctggtttggtgatgctatg +cattcatggttcccccgtcaactcctacaccaataccccctatactggggcgcttgggctccttgattttgc +tctagagcttgagtttaggaacttgacacccgggaacactaacacccgtgtttcccggtatacaagcactgc +ccgtcatcggctgcgccgcggcgccgatggtaccgctgagcttaccaccacagcggccacacgtttcatgaa +ggacctgcacttca---ccggtacgaat---ggggtcggtgaggtgggccgtggtattgctcttacactctt +taatcttgctgacacgctccttggtggtctgccgacagaattaatttcgtcggctgggggacagttgttcta +ttcccgccccgtcgtctcagccaatggcgagccggctgttaagttatatacatctgtggagaacgcgcagca +ggataaagggattgctattccacatgatatagacttaggtgactctcgtgtggttattcaagattatgacaa +tcagcacgagcaggatcggcccaccccttcgcccgccccatctcgccctttttcggttcttcgtgctaatga +tgttctctggctttc-----------------------------tcttaccgccgccgagtatgac------ +cagactacatatgggtcttccaccaacccaatgtatgtctcagatactgtcacatttgt---caacgtggct +acaggggcccaggctgttgcccgctctcttgactggtctaaagttactctagatggccgccccctcactacc +at-----tcagcagtattccaaaacattttatgttc-tcccgctccgcgggaagctatccttttgggaggct +gggacaactaaa--gctggttatccttataattataacacgactgctagtgaccagatcttgattgaaaatg +cagccggtcac------cgtgttgctat-atctacatatactactagccttgg--------------cgccg +gccctgtttctgtttc-tgcggtcggcgttcttgccccgcattctgctttagctgtgcttgaagatactatt +gact---------atcctgcccgtg----ctcacactttcgatgatttctgccctgagtgccgcaccc---t +cggcctgcaaggctgtgcttttcaatc--------tactgtcgctgagcttcagcgtct------------- +--------taaattgaaggtaggtaaaacccgggagttttaattaa-tt----c--tcct--tt------gt +gccc-cct--------tc------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355273.1/17163/1-7163 |Hepeviridae isolate HESQL167, complete genome +--------------------------------------------------------------ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttctatctcgtgtgcaaactgagattct +cattaatttgatgcaaccccggcagttggtttttcgacctgaagtgctctggaatcatcccatccaacgggt +tatccataatgaacttgaacagta---ctgtcgggccc-gggctggccgttgtctagaggttggggcccacc +caagatccattaatgacaacccaaatgttctgcaccggtgttttctacgaccagttgggagagatgttcagc +gctggtactctgctcctacccgtggccctgcggctaactgccgccgttctgccttacgtggcctccctcctg +ttgaccgtacctattgttttgatggattttcccgttgctcattcgccgcagaaactggggttgccctttatt +ctctgcatgacctctggccggccgatgttgcggaggctatggcccgacacgggatgacacgcttgtatgctg +cactacatctc-ccccctgaagtactactaccacccggtacttaccatacaacttcataccttctgattcac +gacggtgatcgtgctgttgtgacctacgaaggtgatactagtgcaggctacaaccatgatgtttccatactt +cgtgcatggatccgcacaactaagatagttggtgatcacccgctggtgatagagcgagtgcgggctattggc +tgccattttgtgctgctgcttactgcagcccctgagccgtcaccaatgccttatgttccatacccccggtcg +acagaggtgtacgtccgctctatattcggccctggc---------gggtccccatccctattcccatcagct +t----------gctccacgaaatcca-cattccacgctgtcccggttcatatttgggaccggctcatgcttt +ttggcgctactctggatgatcaggcgttttgctgttcacggcttatgacctatctccgtgggattagttaca +aggtcactgttggcgcccttgtcgctaatgaggggtggaatgcttcggaggacgctcttaccgctgttatta +ctgcagcgtatttgaccatttgccatcagcgttacctccgtactcaagctatatccaagggtatgcgccgac +tggaggttgagcatgcccaaaaattcattacaagactttatagttggctgttcgagaaatc---------cg +gccgtgactatatccccggccgccagctccagttttatgcacagtgccgccgctggttatcggcgggtttcc +atcttgacccaagggtgcttgtttttgatgagtctgtgccctgc---cgttgtaggacatttcttaagaa-- +----ggctgtgggcaagttctgctgttttatgaagtggttgggacagga------gtgcacctgttttttgg +----------------aaccagcagagggtctagttggcgaccatggc--------cacgataatgaggcct +atgagggctctgaggtagatcaggccgagcccgcccatcttgatgtttctgggacttatgccgtccatggcc +gccaacttgaggccctgtatagggcgcttaacatcccgcatgacatcgctgcccgagcctcccgtttgactg +ctaccgtcgagctcgttgcaggtccagaccgcctggagtgccgcactgtgctcgggaacaagacttttcgga +cgacggtggttgatggcgcccatcttgaggcgaatggccc------------------------cgagcagt +acgttctttcgtttgacgcctctcgccagtccatgggggccgggccgcatagtctctcctatgagctcactc +ctgctggtttgcaggtcaagatttcatct-------aatggcctggattgcactgcaacattcccc---ccg +ggcggggcccctagcgcagccccgggggaggtagcagccttctgcagtgccctttacaggtacaacaggttc +actcagcgccattcgcttataggtggcctgtggctgcatcctgaggggttgttgggtatcttcccccctttc +tcccccgggcacctctgggagtccgctaaccctttttgtggggagggaaccttatacacccggacatggtca +acatccggtttttctagtgacttttccccccccgaggcagccgctgcagcgccggctgctacccc----ggg +gctatgcc---accctacacctcctgttagtgacat-----------------tcgggtgct---------- +---------accgccgcct----tctgaagaac--------------ttcaggttgacacagcgcccgctcc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcccgctcaactgtccagc +cccgctgggccaaag-------------------------------------gcccccgtgcgtaagccgcc +aatgccacc--------------------------------------atccccgcgcacccgtcgcc----- +-------------------ttctttacacctatccggatggggcaaaggtgtatgcgggatcactgtttgag +tctgactgtgattggctggttaatgcgtcgaatcccggccatcgtcctgggggcggcctttgccatgccttt +taccagcgctaccccgagtctt------tctactcaactgagttcattatgcgcgacgg---tcttgccgcg +tacactttaactccccggcctattattcatgcagtggctcctgattatagggttgagcataacccaaagagg +cttgaggcagcataccgagagacttgctctcgacgcggtaccgccgcctacccactcctcggctcgggtata +taccaagttcctgttagcctcagttttgacgcttgggagcgtaaccaccgccccggggatgagctctattta +accgacctcgccgctacc-------------------------------------------------tggtt +cgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------gcccgccctcacaataactgaggatgcagc +cc------------gtacagccaacttggcactggagatag------------atgctgctacggaggtcgg +ccgggcttgt---gccggctgcgcagttagtcctggggttgtgcactatcagttcactgctggggtcccagg +ttcggggaagtcgcgttctatacagcagggggatgttgatgtagtggttgttcccactcgggagctccggaa +cagctggcgtcgccggggtttcgcggcttttacacctcatacggcggcccgtgtcaccacgggccgtcgtgt +tgtgattgatgaggccccatccctcccaccgcatttgttgctactacacatgcagcgggcctcgtcggtcca +ccttcttggcgacccaaaccagatccctgccatagacttcgagcatgccggcctggtccccgcaatacgccc +tgagcttgcgcccaccagctggtggcatgtcacccatcgctgccccgctgacgtgtgcgagcttatacgcgg +ggcctatcctaaaattcaaactactagccgcgtgctacggtctttattctggagtgag------cctgccat +cggccagaaattagtcttcacccaggctgctaaggctgccaatcccggtgcgattacagtccacgaggctca +gggcgccactttcacggaaactacaatcatagccacggctgatgctagggggctcatccaatcttcccgagc +ccatgccatagtcgcacttacccgccacacagagaagtgcgttatccttgatgcccccggcttgttacgtga +ggtcggtatatcagatgtaattgtcaacaatttt------------------------------ttcctcgc +cggcg--gggaggtgggtcatcatcgcccctctgtgatacctcgtggcaatcctgaccagaacctcgcgac- +-----actacaggcctttccaccttcctgccagattagtgcctatcaccagctggctgaggagcttggccac +cgcccagctcctgtcgccgctgtcttgcccccttgccctgaacttgagcagggcttgttatacatgcctcag +gagcttacggtgtctgatagcgtgctggtctttgaactcacggacatagtccattgtcggatggccgccccc +agccagcggaaggccgtcctatccacgctcgtgggtcggtacggccgtcggacgaagctgtatgaagcagct +cactccgacgtccgtgagtccctggctagattcatccccaccattgggcccgttcaggctactacgtgtgag +ttatatgagctggttgaggccatggtggagaaaggtcaggatggctctgccgtgcttgagctcgacctctgc +aatcgtgatgtatcgcgcatcacatttttccagaaagattgtaataaattcaccacaggggagaccattgcc +catggtaaggtcggccagggcatctcggcttggagtaagaccttttgtgccctgtttggtccgtggtttcgt +gctattgagaaagaaatactagccctgctcccgcctaatattttctacggtgacgcatacgaggagtctgtg +tttgccgctgctgtgtcgggggcaggttcaagcatg---gtatttgagaatgatttttcagagtttgatagc +acccaaaataacttctccct------------------tggtctcgagtgtgtagtcatggaggaatgtggc +atgccccagtggctaatccggttgtaccatctggtccggtcggcctggatcctacaggcgccgaaggagtct +cttaagggattttggaagaagcattctggtgagcccggcaccctcctctggaacaccgtttggaatatggcg +atcatagcacactgctatgaatttcgtgattttagggtcgccgctttcaagggagatgattccgtggtcctc +tgtagcgactaccgccagagccgcaatgcagcggccctgattgcaggttgcgggctcaaactaaaggttgat +tatcgccccattgggttgtatgctggtgtggtggtggcccctggtctggggacgctacccgatgtggtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggccgagcagttgcgcttagctgtt +tgtgactttcttcgagggttaacgaatgttgcgcaggtatgtgtcgatgttgtatcccgag-------ttta +cggagttagccctgggctggtacataaccttattggtatgttgcaaaccatagctgatggcaaagcccattt +tacagagactgttaaacctgtgcttgacctcacaaactctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagtcgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtaccgcaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgcgatcagtccca----------- +------gcgcccccccgctgccccacgccgtcgatctgcccca---------gctggggctgcgccgctgac +tgccgtatcacctgctcccgatacggctcctgtacctgatgttgattcgcgtggcgctatactgcgacgcca +gtacaatttatccacatccccgctcacatcatctgttgcttcgggtactaatctggttctttatgctgcccc +gctaaaccctttgctgcccctccaggatggcactaacactcacatcatggccactgaggcatctaattatgc +ccagtatcgggttgtccgagctacgattcgttacaggccattggtgccaaatgctgtcggcggctatgcaat +atccatttcattttggcctcagactactactacccccacgtctgttgatatgaactctattacttccactga +tgtcaggattctagttcagcccggcattgcttctgagttggttatccctagtgagcgcctccattatcgtaa +tcagggctggcgctctgtggagacctcgggtgtggctgaagaggaggctacttctggtctggtaatgctttg +tatccatggctctcctgttaattcctacaccaataccccttataccggggcgcttggactccttgatttcgc +tttagagcttgagtttaggaacctgacacccgggaacaccaacactcgtgtgtcccggtatacaagcacagc +ccgtcaccggctgcgccgcggtgctgatggcaccgccgaacttaccaccacagcggccacgcgctttatgaa +ggacctgcacttca---ccggcacgaat---ggggtcggtgaggtgggtcgtggtattgctctcacactctt +taatcttgctgacacgcttctcggtggtttgccgacagaattaatttcgtcggctgggggacagttattcta +ctcccgccccgtcgtctcagccaatggcgagccgactgtcaagttgtatacatctgtagagaatgcgcagca +ggataaagggatcgctatcccacatgatatagatctgggtgactcccgtgtggtcatccaggactatgacaa +ccagcatgagcaggatcgacccaccccctcgcctgccccttctcgccctttttcggttcttcgcgctaatga +tgttctatggctttc-----------------------------tcttactgccgccgagtatgac------ +cagactacatatgggtcgtccactaacccgatgtatgtctcggatactgtcacatttgt---caatgtggct +acaggagcccaggctgtcgcccgttccctcgactggtctaaagtcactctggatggccgccctcttactact +at-----ccagcagtactccaaaacattttatgttc-tcccgcttcgcgggaagttatctttttgggaggcc +gggacgaataag--gccggctaccccaataattacaacacaactgctagtgatcarattctgatcgaaaatg +gggctggtcat------cgtgttgctat-ttccacgtatacccccagcttggg--------------ggctg +gccctgggtctgtttc-tgcagttggggttttaaccccccctttggcttttgcagtccttgaagacactatt +gact---------accctgcccgtg----cccacacttttgatgatttttgccgggagtgccgcgctc---t +tggtttgcagggttgtgcctttcagtc--------tactattgstgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaatcaa-tt----tc-cctt---t------gt +gccc-cct--------tc------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355275.1/17180/1-7180 |Hepeviridae isolate HESQL113, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccatcagttcataaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccttggcgaatgctgtggtggtccggccgttcttatctcgtgtgcaaacagagattct +cattaatttgatgcaaccccggcaactggttttccgtcctgaggtgctctggaatcaccccatccaacgtgt +tatacataatgaattggagcagta---ctgtcgggccc-gggccggccgctgcctggaaattggggcccacc +caaggtcaattaatgataacccaaatgtcttgcaccgatgttttctgcgaccagtcgggagggatgtccaac +gttggtactctgcccccacccgcggccctgcagccaactgccgtcgatccgcgctacgtggcctccctcctg +ttgaccgtacctactgctttgatgggttctcccgttgtgcttttgccgcagagactggtgtggccctttatt +ctctgcatgacctctggccagccgatgtcgcagaggccatggcccgacacgggatgacccgtttgtatgcag +cgctacatctc-cctcccgaggtactgttaccacccggcacttaccatactacctcgtacctcctgatccac +gacggtgatcgtgccgttgtgacttatgagggcgacaccagcgcgggttacaaccatgatgtttccatactc +cgtgcgtggattcgcacgactaagattgttggtgaccatccgctggtgatagaacgtgtgcgggctattggc +tgtcacttcgtgctgttgctcactgcggcccctgagccgtcacctatgccatatgtcccataccctcggtca +acggaggtgtatgttcgctccatatttggccctggt---------gggtctccgtccttatttccatcagct +t----------gctctaccaaatcta-cattccatgccgtcccagtccatatctgggaccggctcatgctct +tcggcgctaccctggatgatcaggcattttgttgctcgcggcttatgacttatctccgcgggattagttaca +aggttactgttggcgcccttgtcgccaatgagggttggaatgcctcggaggacgcccttaccgctgttatca +ctgcggcgtatttaaccatttgtcaccagcgttacctccgcacccaggcgatatctaaaggcatgcgccggt +tggaggttgagcatgcacagaagtttatcacaagactttacagctggctatttgagaaatc---------tg +gccgtgactatatccccggccgccaactccagttttacgcgcagtgccgccgctggttatcagcgggtttcc +atcttgaccccagggtgcttgtctttgatgagtcagtgccctgc---cgttgtaggacgtttttaaagag-- +----ggtagcaggtaaattctgctgttttatgaaatggctggggcagga------gtgcacctgcttcttgg +----------------aaccagcggagggcctggtcggtgatcaaggc--------cacgacaatgaagctt +atgagggctcagaggttgatcaggctgagcccgtttatcttgatatctcggggacttacgccgttcacggac +gccagctcgaggctctgtatagggcacttaatataccacatgacatcgctgcccgggcgtcccgcctaacgg +ctaccgttgagcttgtcgcaagcccagatcgcttagagtgccgtaccatactagggaataagaccttcagga +caacggtggtcgacggcgcccatctcgaggcgaatggccc------------------------tgagcagt +atgtcctttcatttgatgcctcctgccggtctataggggccggtccgcatggccttacttatgagctgaccc +ccgctggcctgcaagtgaagatctcgtcc-------aacggcctagattgtaccgcgacgttcccc---ccg +ggcggcgcccccagtgccgcaccgggtgaggttgcggccttttgtagtgccctctataggtacaatcggttt +actcagcggcactcgctgacaggtggtctatggctgcatcctgaggggttattagggattttcccccctttt +tcccctggacatacctgggagtctgccaatcccttttgcggggaggggactttgtacactcggacctggtct +acatcaggtttttccagtgacttttccccgcccgaggcagccgctcctgtgccagccgctgctcc----ggg +agtgctcc---gccccacaccccctgttagtgatat-----------------ttgggtgtt---------- +---------accacctgcc----tctgaaga-----------------ctgggctgatgcggcgcctgatcc +cgctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tctctgagcatgctcaatcgtctagc +tctgttaagcctagg-------------------------------------gtcccggtgcataagccacc +gacaccgcc--------------------------------------gccccctcgtacccgccgcc----- +-------------------tcctttacacctatccagacggcgctaaggtttatgcagggtcattgtttgag +tcggactgtgactggctggtcaacgcatcgaaccctggtcatcgccctgggggcgggctctgccatgctttt +taccaacgttaccctgagtcat------tccatccgactgagtttgttatgcgtgacgg---cctcgctgcg +tacactctcacccctcgccctattatccacgcagtggcccccgattatagggtcgagcagaatcctaagagg +cttgaggcggcgtaccgagagacctgctctcgccgcggtactgctgcttacccacttttgggttcgggcata +taccaggtcccagtcggcctcagctttgacgcttgggagcgtaatcaccgccctggggacgagctttacctt +actgacctcgctgccacc-------------------------------------------------tggtt +tgaggccaacaagcccacgca--------------------------------------------------- +------------------------------------------gccggctctcacaataactgaggacacagc +cc------------gaacggccaatttagcactggaacttg------------acgctgccactgaggctgg +tcgcgcctgc---gccggttgcacagtcagtcccggcattgtgcactatcagtttaccgccggcgtcccggg +ttcggggaagtcccggtccatacagcagggggatgttgatgtggtggttgttcccacccgggagctccgcaa +cagctggcgtcgccggggttttgcggcctttacaccacacacggcggctcgtgtcacctcgggccgccgcgt +tgtcattgatgaggccccctccctcccgccacacttgctgctgttacatatgcagcgggcttcgtcggttca +tctcctcggcgatccaaatcagatccctgccatagatttcgagcatgctggcctggtccccgcgatacgccc +cgagcttgcgcccactagttggtggcatgttacacaccgctgccctgctgatgtgtgcgaacttatacgcgg +agcctatccaaagattcaaaccacgagccgtgtactccggtccctattctggaatgag------cccgccac +tggccagaaattggttttcacacaggccgccaaagctgctaaccccggtgcgatcacagtccacgaggccca +gggcgccacctttacggagaccactatcatagctacggctgatgccagaggcctaattcaatcgtctagggc +ccacgctatagtcgcactaacccgccacacagagaagtgcgtcatactggatgctcccggcttgctgcgtga +agttggtatatctgacataattgttaacaatttc------------------------------ttccttgc +cggtg--gtgaggtgggccaccaccgcccttctgtgatacctcgtggcaaccccgaccagaattttgcgac- +-----gttacaggcgttcccaccttcctgccaaattagtgcttatcaccagctggctgaagaattgggccat +cgaccagcccctgttgcagcggtcttgcccccttgccccgaacttgagcagggtctgttgtatatgccgcag +gagcttacagtgtctgacagtgtgttagtttttgagctcacggatatagttcattgccgcatggctgccccc +agccagcggaaggccgtcctatcaacgcttgtggggaggtacggccgtaggacgaagctgtatgaggccgct +cactctgatgtccgcgagtccctagccagatttatccctaccattggacccgttcaggccaccacatgtgaa +ctttatgagctggtcgaggctatggtggagaagggtcaagacggttccgctgttctagagctcgatctttgc +aaccgtgatgtttcgcgtattacattcttccagaaagactgtaataagttcaccaccggcgagaccattgct +cacggtaaagtcggtcagggcatctcagcttggagtaagaccttttgcgccctgttcggcccgtggttccgt +gctattgagaaggagatactggctttgctaccgcccaacattttctacggtgatgcctacgaggagtctgtg +ttcgccgccgctgtatctggggcggggtcatgcatg---gtatttgaaaatgacttctcagagtttgatagt +actcagaataatttctccct------------------tggcctcgaatgtgtgattatggaggagtgtggc +atgccccagtggctaatccggctgtaccatctggtccgatcggcctggattttacaggcgccgaaggagtcc +cttaaaggattttggaagaagcactctggagagcccggcacccttctttggaacaccatttggaatatggcg +atcatagcacattgctatgaatttcgtgactttagggttgccgcttttaagggtgatgactcagtggtcctc +tgtagtgattatcgccagagccgcaatgcggcagttttgattgctggctgcgggcttaaactgaaggttgac +taccgccccatcgggttgtatgccggtgtggtggtggctcctggcttggggacactgcccgatgtagtgcgt +ttcgccggtcggctttccgagaagaattggggccccggcccagagcgggccgagcagttgcgccttgcagtt +tgtgatttccttcgtgggttgacgaatgttgcgcaagtttgtgttgatgttgtgtctcgtg-------tcta +tggggttagccctgggttggtacataaccttatcggcatgctgcagaccattgctgatggcaaggcccactt +tacagagactgttaaacctgtgcttgaccttacgaactccatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gttgttgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagtcggctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcacttcacaacccggggctggagctcgccctc +gacagccgccccg---------------cccccttggctccacttggcgtgaccagtccca----------- +------gcgcccctccgctgcctcccgtcgtcgatctacccca---------gctggggctgcgccgttgac +cgccgtgtcgccagcccccgacacggctcccgtgcctgacgtagactctcgcggtgctatactgcggcggca +gtacaacttatctacgtcaccactaacttcatctgttgcttcaggcactaatctggtcctttatgctgcccc +gctaaaccccctcctgcccctccaggatggtaccaacacacatattatggccaccgaggcttccaattatgc +ccagtatcgggtcgtccgagccacgatccgttaccgcccgttggtgccgaacgccgttggtggctatgcaat +ctccatttcattctggccccagactactaccaccccaacatctgtggacatgaattctatcacctctactga +tgtcaggatcctggtccagcctgggatcgcctctgagttggtcatccctagcgagcgcctccactaccgtaa +tcagggttggcgctctgttgaaacatcaggtgtggctgaagaggaggctacttctggcctagtgatgctttg +tatccatggctctcctgttaattcctatactaataccccctacactggggctctggggctccttgactttgc +attagaacttgagtttaggaacttgacacccgggaacactaatacccgtgtgtcccgctacactagcacagc +ccgccaccggctccgccgcggggccgacggtactgccgagcttaccactacggcagccacgcgttttatgaa +ggacctacacttta---ccggcacgaat---ggggttggcgaggtgggccgtggcattgctctgacgttgtt +caatcttgctgacacacttctcggcggtctgccgacagaattaatttcgtcggctgggggtcagttatttta +ctcccgccctgtcgtctcagccaatggcgagccggctgttaagttatatacatctgttgagaatgcgcagca +ggacaaaggaattgctatcccacatgatatagacttgggtgactctcgtgtggttattcaggactatgataa +tcaacatgagcaggaccggcctaccccatcgcccgctccgtctcgcccgttctcggtccttcgtgctaacga +tgttttgtggctctc-----------------------------tcttactgccgccgagtatgac------ +cagactacatatggatcttccaccaacccaatgtatgtctcagacaccgtcacatttgt---taatgtggct +acaggagctcaggctgttgctcgctctctcgactggtccaaggtcactctggacggccgccctctaactacc +at-----ccagcagtactccaaaacattctatgtcc-tcccgcttcgcggaaagttatctttctgggaggct +ggcacgactaag--gctggctacccttataattacaacacaactgctagtgatcaaattttgattgaaaatg +cggctgggcat------cgtgttgccat-ttccacctacaccactagccttgg--------------tgccg +gacctgtgtcagtctc-tgcggttggtgtgctagcaccgcattcggccctcgccatacttgaggacactgcg +gact---------atccggcccgcg----ctcatacttttgatgatttctgcccggagtgccgcaccc---t +tggcctgcagggttgtgcttttcaatc--------tactattgctgaacttcagcgcct------------- +--------taaaatgaaggtaggtaaaacccgggagtcctaattaa-tt----c--ccct-cct------gt +gccc-cct--------tc-atag-cttt-------------------------------------------- +-------t----gc----------------ttta-------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355281.1/17185/1-7185 |Hepeviridae isolate HESQL067, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggctaattccgccttggcgaatgctgtggtggtccggccgtttttatcccgtgttcagactgacatcct +tattaatttgatgcaaccccggcagcttgtattccggcctgaagtcttttggaaccacccgattcagcgagt +catacataatgagttggagcaata---ttgccgggccc-gcgctggtcgttgccttgaagtgggtgcccacc +cgaggtccatcaacgacaatcctaatgttttgcaccggtgctttctacgcccagttggcagagatgtccagc +gctggtattctgcccctactcgtggtccggcggctaactgccgccgttctgcgcttcgtggcttgccccccg +tcgaccgcacatactgcttcgacgggttctcccgctgtgtttttgccgctgaaactgggattgctttatact +cactgcatgacctctggccttcggacgtcgcggaggccatggcccgccacggtatgacgcgcctgtatgctg +tcctacactta-ccccccgaggtcttgctaccgcctggcacctatcacacaacttcctacctcctgattcac +gatggtgaccgtgctgtcgtgacttatgagggagatactagtgcaggctataaccacgatgtatctatactt +cgtgcttggatccgcaccacaaaaatcgttggtgaccacccactagtgatagagagggttcgcgccatcggc +tgccattttgttctgctccttactgcagcccctgagccatcccctatgccttatgtcccttatccccgctca +acagaagtgtatgttaggtctatatttggccctggt---------gggtcgccatctctttttccatcagcc +t----------gctccactaaatcca-cattccatgctgtcccggttcacatctgggaccggctcatgctct +ttggcgccaccctagatgaccaggccttttgctgctcgcggcttatgacttatctccgcgggattagctaca +aagttaccgttggtgcgcttgttgccaacgagggctggaatgcttcggaggatgcactcactgctgtgatca +ctgcagcgtatctgactatttgccatcagcgctacctccgaactcaggccatctctaaaggcatgcgccggc +tggaggttgagcacgcccaaaaattcattacaaggttatatagctggctgttcgagaaatc---------ag +gccgcgattatattcccggtcgccagctccagttctacgcacagtgccgccgttggctctcggctggtttcc +atctagatcccagggtccttgtttttgatgaggcggtcccctgc---cgctgccggagcttcctgaagaa-- +----ggtcgccggcaaattctgttgttttatgaaatggttggggcagga------atgcacctgctttctgg +----------------agccagcagagggtctggttggcgactgtggt--------cacgacaacgaggctt +acgagggatctgaggttgaccctgctgaacctgctcatcttgatgtatctgggacctatgcggtccatggcc +gtcagcttgaggctctatatagagctctaaacatcccgcatgatattgcggcccgcgcgtcacgtctgacgg +ctactgtggagcttgccgccagccctggccggcttgagtgccgtacggtgctcgggaacaaaactttccgca +catcgataattgatggtgcccatcttgaggccaatggtcc------------------------cgagcagt +acgtcttgacatttgatgactcccgccaagcaatgggagcaggacctcatagcctcacatatgaacttgtcc +ctgctggtctgcaggtaaaaatatcttcc-------aatggcctggattgtaccgcagtatttccc---cct +ggcggggcgccaagtgctccaccaggtgaagtggcggctttttgcagtgctttgtacaggtataataggttc +acccagcgccattcgctgaccggcgggttgtggctgcatcccgaggggctccttggtttgttccctcctttc +tcccctgggcatctctgggagtctgcaaacccgttctgcggtgagagtacactttatacccgaacttggtct +acatccggtttttccagtgacttctccccccccgaggcggcttttgccgctataggtcctgatac----ggg +gctgcccccgggtaccccctcttctgctagtgatgt-----------------ctgggtgct---------- +---------cccgccgccc----tctgagaggt--------------cagcgattgtctcgccgcctgaaac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctagtaagcctgctaatccgcctagt +tttgctgcacctaag-------------------------------------cctcctgttcgtaagccgcc +tacgccgcc--------------------------------------accggtccgtacccgccggc----- +-------------------tcctttacacttaccctgatggggctaaggtgtatgctggctccctgttcgag +tcagattgtgattggttggttaacgcgtctaatcctggccaccgccctggtggcggcctctgccacgcattc +taccagcgcttcccagagtcct------tccacccgactgattttgttatgcgtgaggg---tctcgctgca +tacactttgagcccgcgcccgatcattcatgctgtggcccccgactatagggttgagcagaacccgaagagg +ctggaggcagcatatcgtgagacctgttcccgcctcggtacagctgcctacccgctgctggggtcagggatc +taccaggtccctgtaggtttgagttttgatgcctggcagcgtaaccatcgtccaggcgacgagctctacctc +accgagccagctgccgcc-------------------------------------------------tggtt +tgaagctaataagccaaccca--------------------------------------------------- +------------------------------------------accggctctaacaattaccgaggacaccgc +cc------------gtacggctaatctcgcgcttgagattg------------attcagctaccgaggtggg +ccgtgcttgc---actggttgtactgtcagccccggggttgttcattaccagttcaccgccggggtccccgg +ctctgggaagtctagatccatacaacaaggggatgtcgatgttgtggttgtgccaacccgtgagctccgcaa +cagctggcggcgccgcggctttgccgctttcacaccccacactgcggctcgcgttactgctggccggcgtgt +cgtgatcgacgaagcgccctcgctcccaccgcacttattgctgctccatatgcaacgagcctcatcggtcca +ccttctcggtgatcctaaccagattcctgccatcgactttgagcatgccggtctggtcccggcgattcgccc +tgagctcgcccctactagttggtggcatgtcacccatcgttgtcccgccgacgtgtgtgagcttatacgtgg +ggcttacccaaagattcaaacgactagccgtgtgatgcgatctctgttttggaatgaa------cctgcagt +gggtcagaggttggtattcacgcaggcagccaaggcggctaaccccggcgcaatcactgttcacgaggccca +gggtgctacgtttacagagaccactattatagctacggccgatgctagaggccttattcagtcctcccgcgc +acacgccatcgttgcgcttacccgccatacagaaaaatgtgtcatccttgacgctcctggcctactgcgtga +ggtcggtatttcggacattattgtcaataacttt------------------------------ttcctggc +tgggg--gtgaggtgggtcaccaccgcccctccaccatacctcgtggtaacccagaccggaatttagacac- +-----cctacaagcatttcccccttcctgccaaattagtgcctaccaccagttggctgaggagctaggccac +cggccggccccagtggccgccgttctgcccccttgccccgagcttgagcagggcctactctatatgccacag +gaacttacagtgtctgatagtgttttagtctttgaactcacggacatagttcactgccgtatggccgccccc +agccaacgcaaggcggtcctctcgacgcttgtcggcaggtacggccgtcgaacgaagctgtatgaagcggcc +cattccgatgtccgtgaatccttaggaagatttatccctactattggaccagtccaagccaccacgtgtgag +ttatatgagttagttgaggccatggtggagaagggtcaggacggttccgctgtgcttgagcttgatctctgt +agccgcgacgtctcgcgtattacatttttccagaaggactgtaataagtttacaacaggtgagactatcgct +catggcaaggtgggccagggtatttcggcttggagtaaaaccttttgtgccttatttggcccgtggttccgc +gccattgagaaggagatcctggccctgctcccgcccaacatcttttacggcgatgcttatgaggagtcggtg +ttctctgcagccatttctggggcgggcaccagtatg---gtctttgagaatgacttttctgagtttgatagt +acccaaaataacttctctct------------------tggtcttgagtgtgttatcatggaggagtgtggc +atgccccagtggcttatcagactgtaccatttagttagatcagcctggaccctgcaagccccgaaagagtct +ttgaaagggttttggaagaagcactctggcgagcctggaactctcctttggaacactgtctggaatatggca +atcatagcacattgctatgaattccgtgacatgagagtggcagcgtttaaaggtgatgattcagtggttctt +tgtagtgactaccgtcagagccgtaatgcggccgccctgatagccggctgtgggttgaaactgaaggttgat +taccgtcctataggtctgtatgctggtgttgtagtggctccgggcctcggggcactccctgacgtcgtccgg +tttgccggccgactgtctgagaagaactggggcccgggccctgaacgtgctgaacagttacgcctagcagtc +tgtgatttcctccgagggttgacgaatgttgcgcaggtctgtgttgatgttgtgtctcgtg-------ttta +tggggttagccccgggctggtacataaccttattggcatgttgcagacgattgctgatggtaaggcccactt +tactgagaccgtcaagcccgtattggacctgacaaattctattatacagaggttggaatgaataacatgtt- +c----------------tgtgcatcgcccatggg------------atcgtcatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcagtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcccaacccggggctggagctcgccctc +gacagtcggctcg---------------cccccttggcacctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------gctggggctgcgccgctgac +cgctgtttcaccagcacctgatacagccccggtccctgatgttgactctcgtggtgctattttgcgccgcca +gtataatttgtctacttcccctttgacttcatctgtcgcctctggaactaaccttgttctgtatgctgctcc +actcaaccctctgctgcccctccaagacggtaccaatactcatattatggcaactgaggcatctaactatgc +tcagtatcgagttgtccgggctacgattcgctaccgccctttggtgccgaatgctgtcggtggttatgcaat +atctatttctttctggccccaaaccacaaccacacctacctctgttgatatgaattctattacttctactga +tgttaggatattagtccagcctggcatagcctctgagttggtcatcccgagtgagcgtcttcactaccgtaa +tcagggttggcgctctgtcgagacctcgggtgtggccgaagaggaggcaacatcaggtttggtcatgctctg +tattcatggctcccctgttaactcttataccaacacgccctatactggggcgctggggcttcttgattttgc +actcgagcttgagtttagaaatttaactcctgggaacactaacacccgtgtgtcccgctacaccagtacggc +ccgacatcgcctgcgccgtggtgctgatgggacggccgagcttacaactactgcagccacacgctttatgaa +ggacctgcatttca---ccgggacgaat---ggtgttggtgaagtgggtcgtggtatagccctaacgttatt +caatcttgctgacacacttctcggcgggctgccgacagaattgatttcgtcggctggaggccagctattcta +ttcccgcccagttgtctcagccaatggcgagccgactgtaaagttatacacctctgtcgagaatgcacagca +ggataagggtattgctataccacacgatatagacttaggggactcccgtgtggtcattcaagattatgataa +tcaacatgaacaggaccggcctaccccatcaccggccccatcccgtcccttttcggtcctccgagccaatga +cgtcctgtggctctc-----------------------------tttgactgcagctgaatacgat------ +cagaccacttatggctcgtcgactaaccccatgtatgtttcagacactgtcacatttgt---taatgtggcc +acgggtgctcaggctgttgcccgctctcttgactggtctaaggtcactctagatggccgacctcttactacc +at-----ccagcagtactctaagacattctatgtgt-tgccgcttcgcggtaagctctccttttgggaggct +ggcactactaag--gccggctacccttataattacaatactactgctagtgatcagattttgattgagaatg +cagccggccac------cgtgttgctat-ctctacttacaccactagtcttgg--------------tgctg +gccctgtgtcagtctc-cgcggtcggcgttctcgccccgcactctgctctagctgtgcttgaagataccatt +gatt---------accctgcccgtg----cccatacttttgatgatttctgccctgagtgccgtaacc---t +cggcttacagggctgcgctttccaatc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattaa-tt----cc-ccc--ctt------gt +gccc-cct--------tc-tgag-tt-tt----ac-aa-tg------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355284.1/17197/1-7197 |Hepeviridae isolate HESQL072, complete genome +--------------------------------------------------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcatcactactgccattgag---caagctgctctggc +cgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +cattaatttgatgcaaccccggcagctggttttccgacctgaagtgctctggaatcatcctatccaacgggt +tattcataatgagttagaacagta---ctgccgggccc-gggctggtcgctgcttagaggttggggcccacc +caagatccatcaatgacaacccgaatgttttgcatcgctgcttcctacgaccagttggtagagacgttcagc +gctggtactctgcccctacccgtggccctgcggccaactgtcgccgctccgctctgcgtggcctcccccccg +ttgatcgcacctactgttttgatgggttttcccgctgctcgtttgctgcggagactggtgttgccctctatt +cattgcatgacctctggccggccgatgttgcagaggctatggcccgccatgggatgacacgcttatatgctg +cactacatctc-ccccctgaagtattactgccacctggtacttaccacacaacttcataccttcttattcac +gacggcgatcgtgccgttgtgacctatgagggtgacactagtgcaggttacaaccatgatgtttccatactc +cgcgcatggatccgcacaactaagatagttggcgaccatccgctagtgatagagcgtgtgcgggctatcggc +tgccactttgtgctgctgctcactgcggcccctgagccgtcaccaatgccttatgtcccatacccccggtcg +acagaggtgtacgttcgttccatattcggccctggc---------gggtccccgtccctgtttccatcagcc +t----------gctctacaaaatcca-catttcatgccgtcccagttcatatttgggaccggctcatgctct +ttggtgccaccctggacgatcaggcgttctgctgctcacggcttatgacttaccttcgtgggattagttaca +aggttactgtaggtgcccttgttgctaatgaagggtggaacgcctcggaggacgctcttaccgctgttatca +ccgcagcgtatttgaccatttgtcatcagcgttaccttcgcactcaagctatatccaagggcatgcgccggc +tggaggttgagcatgctcaaaaatttatcacaaggctctacagttggctgtttgagaagtc---------tg +gccgtgactacatccccggccgtcagctccagttctatgcacagtgccgccgctggctatcggcgggttttc +acctcgatccaagggtgcttgtttttgatgagtctgctccctgc---cgttgtaggacgtttctcaagaa-- +----ggttgcaggtaagttttgctgttttatgaagtggctggggcagga------gtgcacctgcttcctgg +----------------aaccagctgagggtctggttggtgaccatggc--------cacgataatgaagcct +atgagggttctgaggtcgaccaggccgagcccgcccatcttgatgtctctgggacttatgccgtccatggga +gccaactcgcggccctgtacagggcgcttaatgtcccgcacgatattgctgcccgagcctcccgtttaaccg +ccactgttgaactcactgcaggcccagaccgtttggagtgccgcactgtgctcgggaataagaccttccgga +caacagtggttgatggagctcatcttgaggcgaatggccc------------------------cgagcagt +atgtcctttcgtttgacgcctcctgccagtctatgggggccgggccgcataacctcacctatgagctcactc +ctgccggtctgcaggttaagatttcatct-------aatggcctggattgcactgcaacattcccc---ccg +ggcggggcccctagtgcagctccggaggaggtagcagctttttgcagtgccctctacaggtacaacaggttt +acccagcgtcattcgctcacaggcggcctgtggctgcatcctgaggggctattaggcatcttcccccctttt +tcccccgggcatctctgggagtccgctaaccctttttgtggggagggaaccttgtacacccggacctggtca +acatctggcttttcgagtgatttttccccccctgaggcggctaccgctgcgccggccgctgccac----agg +gctacccc---accctacaccttctgttagtgacat-----------------tcgggtgtt---------- +---------gccgccaccc----tctgagggat--------------ctcaggttgatgcagcgcctgcccc +tctag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tccctgagcctgctcaaccgcccggc +cctgctaggccgaag-------------------------------------gcccccgtgcgtaagccgcc +aacaccacc--------------------------------------acctccgcgtacccgccgcc----- +-------------------tcctctacacttatccggatggggcaaaggtgtatgcggggtcactgtttgag +tcagactgcgattggctggtcaatgcatcgaatcctggccatcgccccggaggcggcctctgccatgctttt +taccaacgctaccccgagtctt------tttacccaactgagttcattatgcgtgatgg---tcttgccgca +tatactttgactcctcggcctattatccacgcggtggctcccgattatagggttgagcagaacccgaagagg +cttgaagcagcataccgagagacctgctcccgccgtggcaccgccgcttacccacttctcggctcaggcata +taccaagttcccgttagtctcagttttgacgcctgggagcgtaaccaccgccctggggatgagctctacttg +accgacctcgccgctacc-------------------------------------------------tggtt +tgaggccaacaagccagcaca--------------------------------------------------- +------------------------------------------accggccctcacaataactgaagatacggc +cc------------gcacagccaacctagcactagaggtcg------------acgctgctacggaggttgg +ccgggcttgt---gccggttgtacagttagtcccggggttgtgcattatcaatttaccgccggggtcccagg +ttcagggaagtcgcggtctatacagcaaggggacgttgatgtggtggttgtccccactcgggagcttcggaa +tagttggcgtcgccggggttttgcagctttcactcctcacacggcggcccgcgttaccacgggccgtcgtgt +cgtgattgatgaggccccatcccttccaccgcatctgctgcttttacacatgcagcgggcctcgtcggtcca +ccttctcggcgacccaaaccagatccccgccatagattttgagcatgccggtctggttcccgcaatacgtcc +cgagcttgcacccaccagctggtggcatgtcactcaccgctgccccgccgatgtgtgcgagcttatacgcgg +ggcctatcccaaaatccagactactagccgcgtgctgcggtctttattctggaatgag------cccgccat +tggccagaagttagtctttacacaggccgctaaggctgccaaccccggtgcgattacagtccatgaggccca +gggtgccacttttacggagactacaattatagccacggccgatgccagggggctcattcaatcctcccgagc +tcacgccatagtcgcacttacccgccacacagagaagtgcgttatccttgatgctcccggtttattacgtga +ggttggtatatctgatataattgtcaataatttc------------------------------ttcctcgc +cggcg--gggaagtgggccaccaccgcccctctgtgataccccgcggcagtcctgaccagaacctcgcgac- +-----attgcaggcttttccaccctcctgtcagatcagtgcttatcatcagttggctgaggagctgggccac +cgcccggcccccgtcgctgctgtcctgcccccctgccctgaacttgagcagggcctgctgtatatgccacaa +gagctcacggtgtctgatagcgtgttggtttttgaactcacggacatagttcattgccggatggctgcccct +agtcagcggaaggccgtcttatcgacgcttgtgggtaggtatggccgccggacgaagctgtatgaagcggct +cactctgatgtccgtgagtccctgacaagattcatccccaccatcgggcccgttcaggcaactacgtgtgag +ctatacgaactagttgaggccatggtggacaagggtcaggacggctctgccgtacttgaacttgatctttgc +aatcgcgacgtatcgcgtattacattcttccagaaagactgtaacaagttcaccacaggggagaccattgcc +catggtaaggtcggccagggtatctcggcttggagcaagaccttctgtgccctctttggcccgtggtttcgt +gctattgaaaaagaaatactggccctgctcccgcccaatatcttctacggcgatgcatatgaagagtctgtg +tttgctgccgccgtgtctggggcaggttcatgcatg---gtatttgagaatgatttttcagagtttgatagc +actcaaaataatttctccct------------------cggcctcgagtgtgcgatcatggaggaatgcggc +atgccccagtggctaatccggttgtaccacttggttcggtcagcctggattctacaggcgccgaaggagtct +cttaaagggttttggaagaagcattctggtgagcccggcaccctcctttggaacaccgtttggaatatggca +atcatagcacattgctatgagtttcgtgatcttagggttgctgccttcaagggagatgattcggtggtcctc +tgtagcgactaccgtcaaggccgcaacgcagcggccttgattgcaggttgcgggctcaaactaaaggttgat +tatcgccctatcgggttgtatgccggagtggtggtggcccccggcctggggacgctacccgatgtagtgcgt +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggccgagcagctgcgccttgctgtt +tgtgattttcttcgagggctgacgaatgttgcgcaggtatgtgttgatgttgtatcccgag-------ttta +cggggttagtcctgggctggtacataaccttattggcatgctgcagaccattgctgatggtaaagctcactt +tacagagactgttaaacctgtgcttgaccttacaaactctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------accaccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcatttcgcaacccggggctggagctcgccctc +gacagccatcccg---------------ccccctcggtacctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccacgtcgtcgacctgcccca---------actggggctgcgccgctgac +tgctatatcacctgctcctgatgcagcccccgtgcctgatgttgattctcgtggcgccatattgcggcgcca +gtataatctgtctacatccccactcacatcatccgttgcttcgggtaccaatctggttctctacgctgcccc +actaaaccccttgttacctcttcaggatggtactaacactcacatcatggctactgaggcgtccaactatgc +ccagtaccgggttgtccgagctacgatccgttacaggccgttggtgccgaatgctgtcggcggttatgcaat +ctccatctcattctggcctcagaccactaccacccctacgtctgttgacatgaattctattacttctactga +tgttaggatcttagttcagcccggtgttgcttccgagttggttatccctagtgaacgcctccactaccgtaa +ccagggttggcgctccgtggagacctcgggtgtggctgaggaggaggccacttctggtttggtgatgctatg +catccatggttctcccgttaattcctacaccaataccccctataccggggcgcttgggctccttgactttgc +tctagagcttgagtttaggaacttgacacccgggaacaccaacacccgtgtttcccggtatacaagcactgc +ccgtcaccggctgcgccgcggcgccgatggcaccgctgagcttaccaccacagcggccacacgtttcatgaa +ggacctgcacttca---ccggtacgaat---ggggtcggtgaggtgggccgtggtattgcccttacactctt +taatcttgctgacactctcctcggtggtctgccgacagaattaatttcgtcggctgggggacagttgtttta +ttcccgccccgtcgtctcagccaatggcgagccggctgttaagttatatacatctgtggagaatgcgcagca +ggataaagggattgctattccacatgatatagacttaggtgactctcgtgttgttattcaagattatgataa +tcagcacgagcaggaccggcccaccccttcgcccgccccatctcgccctttttcggttcttcgtgctaatga +tgttctatggctttc-----------------------------ccttaccgctgccgagtatgac------ +cagactacatatggttcgtccaccaacccaatgtatgtctcggacactgtcacacttgt---caacgtggct +acaggagcccaggctgttgcccgctctcttgactggtctaaagttactttagatggtcgcccccttaccacc +at-----tcagcagtactctaaaacattttatgttc-tcccgcttcgcgggaagctatccttttgggaggct +ggtacaactaaa--gctggttatccttataattataacacgactgctagtgaccagattttaatcgaaaatg +ctgctggtcac------cgtgttgctat-ctctacttatactaccagccttgg--------------cgctg +gccctgggtcagtttc-tgcagtcggtgtgttaaccccacattcggccctcgcagctcttgaggatactatt +gact---------accctgctcgtg----cccacacttttgatgatttttgtccggagtgtcgcgccc---t +tggtttgcaggggtgtgccttccagtc--------tactgttgctgagctccagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattaa-tt----t--cctt---t------gt +gccc-cct--------tc-atag-tttct----gt-ct---c-----------------att-t-------c +tttctttt----tt----------------tctgc------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355287.1/17235/1-7235 |Hepeviridae isolate HESQL023, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagttggtttttcgacctgaagtgctctggaatcatcctatccaacgggt +tatccataatgaacttgagcagta---ctgtcgggccc-gggctggtcgttgtcttgaggttggggcccatc +caagatccattaatgacaacccaaatgttttgcaccggtgctttctacgtccagttgggagagatgttcaac +gctggtactctgcccctacccgcggccctgcggctaactgccgtcgttctgccttgcgtggcctcccccccg +ttgatcgtacctattgttttgatggattctcccgctgctcatttgctgcagaaaccggggttgccctttatt +ctctgcatgacctctggccggccgatgttgcggaggctatggcccggcacgggatgacacgcttgtatgctg +cactacatctc-ccccctgaagtactattaccacccggtacttaccatacaacttcataccttctgatccac +gacggtgatcgtgctgttgtgacttatgaaggtgatactagtgcaggctacaaccatgatgtctccatactt +cgtgcatggatccgcacaactaagatagtcggcgaccatccactggtgatagagcgtgtgcgggccattggc +tgccattttgtgctgctgcttactgcagcccctgagccgtcaccaatgccttatgtcccatacccccggtcg +acagaggtgtatgtccgctctatattcggccctggc---------gggtccccatccctattcccatcagct +t----------gctctacgaaatcta-catttcacgctgtcccggttcatatttgggaccggctcatgcttt +ttggcgctactctggatgatcaggcgttttgctgctcacggcttatgacctacctccgcgggattagttata +aggtcactgtcggcgcccttgtcgctaatgaggggtggaatgcttcggaggacgctcttaccgctgttatta +ctgcagcgtatttgaccatctgccatcagcgttacctccgtactcaagctatatccaagggtatgcgccgac +tggaggttgagcatgcccaaaagttcattacgagactttatagttggctgttcgagaagtc---------cg +gccgtgactatattcccggccgccagctccagttctatgcacagtgccgccgttggttatcggcgggcttcc +atcttgacccaagggtgcttgtttttgatgagtctgtgccttgc---cgttgtaggacatttcttaagaa-- +----ggctgtgggtaagttctgctgttttatgaagtggttgggacagga------gtgcacctgctttttgg +----------------aaccagcagagggtctagttggcgaccatggc--------cacgataatgaagcct +atgagggctctgaggtcgatcaggctgagcccgcccatcttgatgtttctgggacttatgccgtccatggcc +gccaacttgaggccctgtatagggcgcttaacatcccgcatgacattgccgcccgagcctcccgtttgactg +ccaccgtcgagctcgttgcaggtccagaccgcttggagtgccgcactgtgcttgggaataagactttccgga +cgacggtggttgatggcgcccatcttgaggcgaacggccc------------------------cgagcagt +acgttctttcgtttgacgcctcccgccagtccatgggggccgggccgcatagtctctcctacgagctcactc +ctgctggtttgcaggtcaagatttcatct-------aatggcctggattgcactgcaacattcccc---ccg +ggcggggcccctagcgctgctccgggggaggtggcagccttctgcagtgccctttacaggtacaacaggttc +actcagcgccattcgcttataggtggcttgtggctgcaccctgaggggttattgggtatcttcccccctttc +tctcccgggcacctttgggagtccgctaaccctttttgtggggagggaaccttgtacacccggacatggtca +acatctggtttttctagtgacttctccccccctgaggcagccgccacagcgccggctgctactcc----ggg +atcacgcc---accctacacttcctgttagtgatat-----------------tcgggtgct---------- +---------accgccacct----tctgaagaat--------------ttcaggttgatacagcgcccgctcc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcccgctcaattatctaac +cccgctgggctaaag-------------------------------------gctcccgtgcgtaagccgcc +aacgccacc--------------------------------------atccccgcgcacccgccgcc----- +-------------------ttctttacacctatccggatggggcaaaggtgtatgcggggtcactgtttgag +tcagactgtgattggctggttaatgcgtcgaatcccggccatcgtcctggcggcggcctttgccatgccttc +taccaacgctatcccgagtctt------tctactcaactgagttcatcatgcgcgacgg---tcttgccgca +tacactttaactcctcggcctattattcatgcagtggcccctgattatagggttgagcataacccaaagagg +cttgaagcagcataccgagagacttgctctcgccgcggtaccgccgcctacccactcctcggctcgggtata +taccaagttcctgtcagcctcagctttgacgcttgggagcgtaaccaccgtcccggggacgagctctaccta +accgacctcgctgctacc-------------------------------------------------tggtt +tgaggctaacaaaccaacaca--------------------------------------------------- +------------------------------------------gccggcccttacaataactgaggatgcagc +cc------------gcacggccaacctagcactggagatcg------------atgctgctacggaggttgg +ccgtgcttgt---gccggctgtgcagttagtcctggggttgtgcactatcagtttactgctggggtcccggg +ttcggggaagtcgcgttccatacagcagggggatgttgacgtagtggttgttcccactcgggagctccggaa +tagttggcgccgccggggtttcgcagcttttacaccccatacggcggcccgtgttaccacgggccgtcgtgt +tgtgattgatgaggccccatccctcccaccgcatttgttgctactacacatgcagcgggcctcgtcggtcca +ccttctcggcgacccaaaccagatccctgctatagacttcgagcacgccggcctggtccccgcaatacgccc +tgagcttgcgcctaccagttggtggcatgttacccaccgctgccccgctgatgtgtgcgagcttatacgcgg +ggcttaccccaaaatccaaaccactagccgcgtgctgcggtctttattctggaatgag------cctgccat +cggccagaagttagttttcacccaggccgccaaggccgccaaccccggtgcgattacagtccatgaggccca +gggcgctactttcacggaaaccacaatcatagccacagctgatgccagggggctcatccaatcttcccgagc +tcatgccatagttgcacttacccgccacacagagaagtgcgttattcttgacgcccccggcttgttacgtga +ggttggtatatcggatgtgattgtcaacaatttt------------------------------ttcctcgc +cggcg--gggaggtgggtcaccaccgcccctctgtgatacctcgcggcaatcctgaccagaacctcgcgac- +-----actacaggccttcccaccttcttgccagattagtgcctatcaccagttagctgaggaacttggccac +cgcccagcccccgtcgccgctgttttgcccccttgccccgaacttgagcaaggcttattgtatatgccgcag +gagcttacggcgtctgacagcgtgctggtctttgaactcacagacatagtccattgccggatggctgcccct +agccagcggaaggccgtcctatcgacgcttgtgggtaggtacggccgtcggacgaagctgtacgaagcagct +cactctgacgtccgtgactccctggctagatttatccccaccattgggcccgttcaggctactacgtgtgag +ttatatgagttggttgaggccatggtggagaaaggtcaggatggctctgctgtgcttgagctcgacctctgc +aaccgtgatgtatcgcgtatcacatttttccagaaagattgtaacaaattcaccacaggggagaccattgcc +cacggtaaggtcggccagggcatctcggcttggagtaagaccttctgtgccctgtttggtccgtggtttcgt +gctattgaaaaagaaatacttgccctgctcccgcctaatatcttctacggcgacgcatacgaggagtctgtg +tttgccgccgctgtgtcaggggcaggttcaagcatg---gtatttgagaatgatttttcagagtttgatagc +acccaaaataacttctccct------------------cggcctcgagtgtgtaatcatggaggaatgtggc +atgccccagtggctaatccggttgtaccattttgttcggtcggcctggatcctacaggcaccgaaggagtct +cttaaaggattttggaagaagcattctggtgagcccggcaccctcctctggaacactgtttggaatatggcg +atcatagcacactgctatgaattccgtgattttagggttgccgctttcaagggagatgattccgtggtcctc +tgtagcgactaccgtcagagccgtaatgcagcggccctgattgcaggttgtgggctcaaactaaaggttgat +tatcgccctattgggttgtatgctggtgcggtggtggcccctggtctggggacgctacccgatgtggtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccagagcgggctgagcagttgcgcctagctgtt +tgtgacttccttcgagggttgacgaatgttgcgcaggtatgtgttgatgttgtatcccgag-------ttta +tggggttagccctgggttggtacataaccttattggcatgttgcaaaccatagctgatggtaaagcccactt +cacagagactgttaaacctgtgcttgacctcacgaactctatcatacagcgggtagaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagtcgtctggcc------------gccgtcgtgggcg-gcgcggcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtaccgcaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgtgatcaatccca----------- +------gcgcccctccgctgtcccacgtcgtcgatctgcccca---------gctggggctgcgccgttgac +tgccacatcacctgcccccgatacagtccctgtgcctgatgttgactctcgcggcgccatattgcggcgcca +gtacaatttatccacatccccgcttacatcatctgttgcctcgggtactaatctggttctttatgctgcccc +gctaaaccctttgctgcccctccaggatggcactaacactcacattatggccactgaggcatctaattatgc +ccagtatcgggttgtccgggctacgatccgttacaggccattggtgccgaatgctgtcggcggttatgcaat +atccatctcattttggcctcagactactactacccccacgtctgttgatatgaactctattacttccactga +tgttaggattttagttcagcccggcattgcttctgagttggttatccctagcgagcgcctccattatcgtaa +tcagggctggcgctctgtggagacctcgggtgtggctgaagaagaggctacctctggtttggtaatgctttg +tattcatggctcccctgtcaattcatacaccaataccccctataccggggcgcttggactccttgatttcgc +tttagagcttgagtttaggaacctgacacccgggaataccaatacccgtgtgtcccggtatacaagcacagc +ccgtcatcggctgcgccgcggtgctgatggcaccgccgaacttaccaccacagcggccacgcgcttcatgaa +ggacttgcacttca---ccggtacgaat---ggggtcggtgaggtgggtcgtggtattgctctcacactctt +taatcttgctgatacgcttctcggtggtttgccgacagaactaatttcgtcggctgggggacagttattcta +ctcccgccccgtcgtctcagccaatggcgagccgactgtcaagctatacacatctgtagagaatgcgcagca +ggataaagggatcgctattccacatgacatagatttgggagactcccgtgtggtcatccaagactatgacaa +ccagcatgagcaggatcgacccaccccctcgcctgccccttctcgccctttttcggttcttcgcgctaatga +tgttctatggctttc-----------------------------tcttactgccgctgagtatgac------ +aagactacatatgggtcgtccaccaacccgatgtatgtctcggatactgtcacatttgt---caacgtggct +acaggagcccaggctgtcgcccgttcccttgactggtctaaagttactctggacggccgccctcttaccact +at-----ccagcagtactccaaaacattttatgttc-tcccgctccgcgggaagctgtctttttgggaggcc +gggaccactaag--gccggatacccctataattacgacacaactgctagtgatcagattttgattgaaaatg +cagctggtcat------cgtgttgctat-ttccacgtataccaccagcttggg--------------cgctg +gccctgtgtctgtttc-tgcagttggtgttttagccccacattcggcccttgcggtccttgaagacactatt +gatt---------accctgcccgtg----cccacactttcgatgacttttgcccggagtgtcgcgccc---t +tggtttgcaggggtgcgccttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattca-at----tttcctt---t------gt +gccc-cct--------tc-atag-ctttt----gc-tt---t----------------attt-c-------t +ttttttct----ggg---------------ggttccccccccccc---------------------ggaaga +aaaaaaa---------------aaaaatat------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355288.1/17252/1-7252 |Hepeviridae isolate HESQL016, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactccgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcagaccgagattct +tattaatttgatgcaaccccggcagttggtcttccgccctgaggtgctctggaatcatcctatccagcgggt +tatacacaatgaattagaacagta---ctgccgggctc-gggctggccgttgcttggaggtcggagctcacc +cgagatctattaatgataaccccaatgtcttgcaccggtgttttcttagaccagttggccgagatgtccagc +gctggtactctgcccccacccgtggccctgcggctaattgccgccgctccgcgctgcgcggtctcccccccg +tcgaccgtacttactgttttgatggtttttcccgttgtgcttttgctgcagagaccggtgtggccctttact +ccttgcatgacctttggccagctgatgttgcagaggctatggcccgccatgggatgacacgcctatatgccg +cactgcacctc-ccccctgaggtgctgctaccacccggcacctaccacacaacctcgtatctcctgattcac +gatggcgaccgtgctgttgtaacctatgagggtgatactagtgcgggctataatcatgatgtttccatactt +cgtgcgtggatccgtactactaaaatagtcggcgaccacccgttggttatagagcgtgtgcgggccattgga +tgccattttgtgctgctgctcaccgcagctcctgagccgtcacctatgccttatgtcccctacccccgttca +acggaggtgtatgtgcgatctatctttggccccggc---------ggctccccatctttgttcccgtcagcc +t----------gctctactaaatcta-ctttccatgctgtcccggttcatatctgggatcggctcatgctct +ttggcgccaccttggacgatcaggcgttctgctgctcacggcttatgacttaccttcgtggtattagctaca +aggtcactgttggtgcgcttgtcgctaacgaggggtggaatgcttctgaagatgcccttactgcggtgatca +ctgcggcttatttgactatttgccatcagcgctatcttcgcacccaggcgatatccaagggcatgcgccggc +tagaagttgaacatgcccagaaatttattacaagactctacagttggctatttgagaagtc---------cg +gccgtgactacatcccaggccgccagcttcagttttacgcacagtgccggcgatggctatctgcgggcttcc +acctagaccccagggtgcttgtttttgatgaatcagtgccatgc---cgttgtaggacgtttttaaagaa-- +----agttgcgggcaagttctgttgttttatgcggtggttagggcagga------gtgtacctgcttcttgg +----------------agccagctgagggtttagttggcgaccatggc--------catgacaacgaggcct +atgagggttctgaggtcgactcggctgaacccgcacatcttgatgtttcagggacttatgccgtccacgggc +accagcttgaggctctctatagagcacttaatgtcccacatgatatcgccgctcgagcttcccgattaacag +ccactgttgagctcgctgcaagtccagaccgcttagagtgccgcactgtgcttggtaataagaccttccgga +cgacggtggttgacggcgcccatcttgaagcgaatggccc------------------------cgagcagt +acgtcctatcgttcgacgcctcccgtcagtctatgggggccggggcgcacagcctcacttacgagctaacac +ctgccggtttgcaggtcaggatttcatct-------aacggcctagactgtactgctacatttccc---ccc +ggtggcgcccctagcgccgcgccgggggaggttgcagctttttgcagtgccctttatagatataacaggttc +acccagcggcattcgcttaccggtggattgtggctacaccctgagggactactgggcatctttcccccattc +tcccccgggcatatctgggagtctgcaaaccccttttgcggtgaggggactctatatacccgaacctggtca +acatccggcttctctagtgatttttcccctcctgaggcggccgtccctgctccggtcgctgcccc----ggg +gccgcccc---atcctaccccgcctgttagtgatat-----------------ttgggtatt---------- +---------gccaccgcct----tcagagggat--------------ctcaggtcgatgcggcgcccgtgcc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tccctgagccagctgggttgcctagt +tccactgtgcttaccc-------------------ctccccctccctcccttccccctgtgcgtaagccatc +aacaacccc--------------------------------------gccttctcgcactcgccgtc----- +-------------------tcctctacacctatcccgacggtgctaaggtgtatgcggggtcattgtttgag +tcggactgtgactggttggttaacgcatcaaaccccggccatcgccctggaggtggcctctgtcatgccttt +taccaacgtttcccagaagcgt------tctattcgactgaattcattatgcgtgaagg---tctagcagca +tataccctgaccccgcgccctatcattcatgcagtggctcccgattataggttagagcagaacccgaagagg +cttgaggcagcctaccgggaaacttgttcccgtcgtggcaccgctgcctacccccttttaggctcgggtata +tatcaggtccctgttagcctcagttttgatgcctgggaacgtaatcaccgtcccggcgacgagctttatttg +actgagcctgccgcagcc-------------------------------------------------tggtt +tgaagctaacaagccggcaca--------------------------------------------------- +------------------------------------------gccggcgctcactataactgaggacacagc +cc------------gtacggccaacctggcattagaaattg------------atgcagccacagaggttgg +ccgtgcctgc---accggctgtactatcagccctgggattgtgcactaccagtttaccgccggggtcccggg +ctcgggcaaatctaggtctatacagcagggggatgtcgatgtggtggttgtgcccacccgagagctccgtaa +tagttggcgccgccggggctttgcggctttcacacctcacacggccgcccgcgttactaccggccgccgcgt +tgtgattgatgaggctccatctcttccgccacacttgttgctgttacacatgcagagggcttcctcggtcca +ccttcttggtgacccgaaccagattcctgctattgattttgaacacgccggcctggtccccgcgatccgtcc +cgagcttgcaccaacaagctggtggcacgtcacacaccgttgcccggccgacgtgtgcgagctcatacgcgg +agcctatcctaaaatccagaccacgagccgtgtgctacggtccctgttttggaatgag------ccggctat +tggccagaagttggttttcacgcaggctgctaaggctgccaaccctggtgcaattacagtccacgaagctca +gggtgctacttttacagagaccacaattatagccacggctgatgccaggggccttatccagtcatcccgggc +ccatgctatagttgcacttactcgccataccgagaagtgtgttattctggatgcccctggcttgctgcgtga +ggtcggtatttcggacgtgattgttaataacttt------------------------------ttcctagc +tggcg--gggtggttggccatcaccgcccttctgtgataccccgcggtaaccttgatcagaacctcgggac- +-----tctacaggccttcccgccgtcctgccagatcagtgcttaccatcagttggctgaggaactaggccat +cgcccggcccctgtcgccgccgtcctgcctccttgccctgagcttgagcaaggcctgctctacatgccacaa +gagctcactgtgtccgacagtgtattggtttttgagctcacggatatagtccattgccgtatggccgcccca +agccagcgaaaggctgttctttcaacactcgtggggaggtatggccgtaggacaaaattatatgaggcagca +cattcagacgttcgtgagtcccttgctaggttcatccccactattgggcctgttcaggctaccacatgtgag +ctgtatgagttggttgaggccatggtggagaagggtcaggacggctctgccgtcctagaacttgatctctgc +aatcgtgacgtttcgcgcattacattcttccaaaaggattgcaacaagtttacaattggtgagaccatcgcc +catggtaaggtcggccagggtatatcggcctggagtaagaccttctgcgctctgttcggcccgtggttccgc +gccattgaaaaagaaatattggccctactcccgcctaatatcttctacggcgacgcctacgaggagtcagtg +tttgccgccgctgtgtccggggcagggtcatgtatg---gtatttgaaaatgacttttcagagtttgacagt +acccagaataatttctctct------------------cggccttgagtgtgtggttatggaggaatgcggc +atgccccagtggttaatcaggttgtatcatctggttcggtcagcctggattttgcaggcgccgaaggagtct +cttaagggtttctggaagaagcactctggtgagcccggcacccttctttggaacaccgtctggaacatggcg +attatagcacattgctatgagttccgtgaccttcgtgttgccgccttcaagggtgatgattcggtggtcctc +tgtagcgactaccgacagagccgcaatgcggctgccttaatagcaggctgtgggctcaaattgaaggttgac +tatcgccccattgggctgtatgccggggtggtggtggcccctggtttggggacactgcccgatgtggtgcgt +tttgctggtcggttgtctgaaaagaattggggccccggcccagaacgtgctgagcagctacgtcttgctgtt +tgtgatttccttcgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggagttagccccgggctggtacataaccttattggcatgctgcagaccattgctgatggcaaggcccattt +tacagagactattaaacctgtgcttgacctcacaaattccatcatacagcgggtggaatgaataacatgtc- +t----------------tttgcatcgcccatggg------------atcatcatgcgccctagggctgttct +gttgttgctcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgactggcc------------gtcgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgccgatgtcgtttcacaacccggggctggaactcgccctc +gacagccgctccg---------------cccccttggctccgcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgctatatcaccggcccctgatacagcccctgtgcctgatgttgattcacgtggcgctattttgcgccggca +gtataatctgtccacgtccccgcttacgtcatctgtcgcctcgggtactaatctggttctctatgccgcccc +gctaaaccctcttttgcctcttcaggatggcaccaacactcacattatggctactgaggcatctaactatgc +tcagtatcgggttgttcgagccacgatccgctatcgcccgctggtgccaaatgctgttggtggttatgctat +atctatctctttttggcctcagactacaactactcctacttctgttgacatgaattctattacttctactga +tgttaggatcctggttcagcccggtattgcctccgagttggtcatccctagtgagcgccttcattaccgcaa +tcaaggttggcgctctgttgagaccacgggtgtggctgaggaggaggctacctccggtctggtaatgctttg +tattcatggctctcctgttaattcctatactaatacaccttacactggtgcactggggcttcttgattttgc +attagagcttgaatttagaaatctgacacccgggaacactaacacccgtgtttcccggtatactagcacagc +ccgccaccggttgcgccgcggtgccgatgggaccgctgagcttaccaccacagcagccacacgtttcatgaa +ggatttgcatttta---ctggtacgaac---ggcgttggtgaggtgggccgtggtattgctctgacactgtt +taaccttgctgatacgcttctcggtggtttaccgacagaattgatttcgtcggccgggggtcagctgtttta +ctcccgccctgttgtctcggccaatggcgagccgacagttaagttatatacgtctgtcgagaatgcacagca +agacaagggcattaccatcccacacgatatagatttgggtgattcccgtgtggttattcaggactatgataa +ccagcacgagcaagaccgacccactccgtcacctgccccctctcgccctttttcagttcttcgtgccaatga +cgttttgtggctctc-----------------------------tctcactgccgctgagtacgac------ +caaaccacgtatgggtcgtccaccaaccccatgtatgtttctgacacagtcacgcttgt---taatgtggct +actggtgctcaggctgttgctcgctctcttgattggtctaaagttactctggatggccgccccctcactacc +at-----tcagcagtattctaagacattttatgttc-tcccactccgtgggaagctgtctttttgggaggct +ggtacgaccaag--gctggctacccgtataattataataccactgctagtgatcaaattttgattgagaacg +ctgccggtcac------cgtgtcgtcat-ttccacctataccactagcttggg--------------tgccg +gccctacttcgatctc-cgcggtcggcgtactagctccgcactcggccctcgctgttcttgaggacactgtt +gatt---------accccgctcgtg----ctcatacttttgatgatttttgcccggagtgtcgcaccc---t +tggtttacagggttgtgcgttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattaattt----c--c--t-ttt------gt +gccc-cct--------tc-gcag-ttcttcctggc-tt--------------------tatt-t-------c +ttatttct----gg----------------tttct-cgcccccgg---------------------aaaaaa +aacaaaa---------------aacaccc------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355291.1/17291/1-7291 |Hepeviridae isolate HESQL001, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcattactactgccatcgag---caggctgctctggc +tgcggccaattctgccttggcgaatgctgtggtggtccggccgtttctatctcgtgttcaaattgatattct +tattaacttgatgcaaccccggcagcttgtgttccgacctgaagtcctctggaatcacccgattcagcgagt +catacataatgagctggagcaata---ctgccgagccc-gcgctggtcgttgtcttgaggtgggcgcccacc +caagatccatcaatgataaccctaatatcttgcaccgctgcttcctccgcccggttggaagagacgtccagc +gctggtactctgcccctactcgtggccctgcggctaattgtcgccgctccgcgttacgcggtttgccccctg +tcgatcgcacatattgcttcgacgggttctcccgctgcacctttgccgctgagaccggaattgctttatatt +cattgcatgatctctggccttcggacgtagcggaggctatggcccgccacgggatgacgcgcctgtacgctg +cccttcaccta-ccccccgaggtcctgctaccacctggcacttaccacacaacttcctatcttttgattcac +gacggcaatcgcgctgtcgtgacttatgagggggacactagtgcgggctataaccacgatgtgtctatactt +cgtgcatggatccgcaccaccaaaatagttggtgatcacccactggtaatagagagggtccgcgctatcggc +tgccattttgtcttactccttaccgcagcccccgagccatccccgatgccttatgttccttaccctcgctca +acagaggtgtatgttagatccatatttggccctggc---------gggtcgccttctcttttcccatcagcc +t----------gctccaccaaatcca-catttcatgccgttcctgttcatatctgggaccgccttatgcttt +ttggtgctactttggatgatcaagccttctgctgctcgcggcttatgacctacctccgtgggattagttaca +aggtgactgtcggtgcactcgttgccaacgagggctggaacgcctcggaggatgcgcttactgccgtcatta +ctgcagcgtacctgaccatttgccatcaacgttacttaagaacacaggctatctccaaaggcatgcgtcgtc +tagagcttgagcatgcccaaaaatttatcacaaggttatatagctggctgtttgagaagtc---------ag +gccgtgactacatccccggtcgccagctccagttttatgcacagtgccgccgctggctctcggccggcttcc +acctggaccctagagtcctcgtttttgatgaggcggtcccctgc---cgctgccggagtttcttaaagaa-- +----agctgccggaaaattttgctgttttatgaaatggttggggcagga------gtgcacctgctttctag +----------------agccagcagaaggtcttgttggtgactgtggc--------catgacaacgaggcct +atgaagggtcagaggtggaccctgccgagcctgctcatcttgatgtctccgggacttatgcggtccacggcc +ggcagcttgaggctctatatagagcgcttaatatcccacatgacattgcggctcgtgcatcacgtttgacgg +ctactgtggaactcgccgccagcccaggccgccttgagtgccgcacagtgctcgggaataagaccttccgta +catcaataactgatggcgcccacctcgaagccaacggtcc------------------------cgagcaat +atgttctgacatttgatgactctcgccaggcaatgggggctggacctcacagcctcacgtatgaacttgtac +ctaccggtctgcaggttaaaatatcttct-------aatggcttggattgtaccgctatatttcct---ccc +ggcggggcgccaagtgctgcaccaggtgatgtggcggctttttgctccgccctatacaggtacaataggttc +acccagcgccattcgctgaccggtgggctgtggttgcaccctgaggggctccttggccttttcccccctttc +tccccggggcatctctgggagtctgcaaaccccttctgcggtgagagcacactttatacacgaacttggtct +acatctggtttttctagtgacttctccccacctgaggcggcccttgccgccccagcccccgacat----agg +gttaccttcgggtgcaccctcgtctgctagtgatgt-----------------ctgggtgtt---------- +---------tccgccaccc----tctgaggggt--------------cggcgattgtcccgccacctgagac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcggtaagccagctaacccgcccagc +ctcactacacttacg-------------------------------------ccccccgcccgtaagccacc +tacaccacc--------------------------------------cccggctcgcacccgtcggc----- +-------------------ttctttatacataccctgatggggccaaggtgtatgcaggctctttgtttgaa +tcagattgtgattggctggttaatgcatctaaccctggccaccgccctggtggtggtctttgccatgcgttt +taccagcgcttcccggagtcgt------tccatccgactgattttgttatgcgtgaagg---cctcgccgca +tacactttgagcccgcgtccgattattcatgctgtggcccccgactatagggttgagcagaaccccaagagg +ctagaggctgcatatcgtgagacctgctctcgcctcggcacagctgcctacccgctactggggtcgggaatt +taccaggttcctgtaggtttgagttttgacgcctgggagcgtaaccaccgcccaggcgatgagctctacctt +accgagccagctgctgca-------------------------------------------------tggtt +cgaggctaacaagccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggatactgc +cc------------gcacagccaatctcgcgcttgagatcg------------actctgccaccgaggtggg +tcgtgcttgc---gccggctgcactgttaaccctgggattgtccattatcagtttaccgctggggttccagg +ctccgggaagtctaggtctatacaacagggggatgttgacgttgtggtcgtgccgactcgtgagcttcgcaa +tagttggcgacgccgcggctttgctgcttttacacctcacacggcagctcgtgtcactgccggccggcgtgt +ggtgatagatgaggcaccttcgcttccaccacacttgctgctgctccatatgcagcgagcctcatcggtcca +tcttcttggtgaccctaaccagatccccgccatcgactttgagcatgccggtttggtcccagcgattcgtcc +tgagcttgcccctactagttggtggcatgtcactcaccgctgccccgccgacgtgtgtgagctcatacgcgg +ggcttacccaaagatccagacgactagccgcgtgttgcgatctttattctggaatgaa------cctgcggt +gggccagaggctcgtgttcacgcaggcggctaaggcggccaatcctggtgcaatcactgtccacgaggccca +gggtgctacgttcacggagactaccatcatagctacggccgatgctagaggtcttatccagtcttcccgagc +tcatgccatcgttgcgcttacccgccatacagaaaagtgtgtcattcttgatgcccctggcctactgcgtga +agttggcatttctgacataatagttaataacttt------------------------------ttcctggc +tggcg--gtgaagtgggccaccaccgcccttctaccataccccgcggcaacccagaccagaacctagacac- +-----cctacgggcattccctccgtcctgtcaaattagtgcctaccatcagctggctgaggagctgggtcac +cggccggccccagtagccgccgtcctgcccccttgccctgagctcgaacaagggctactttatatgccacag +gagcttacggtgtccgatagtgtcctagtttttgagctcacggacatagttcactgccgtatggctgccccc +agtcaacgtaaggcggtcctttcgacgctcgtcggtaggtacgggcgccgaacgaagctgtacgaagcggct +cattccgatgttcgcgagtctttagggaggttcatccctactattggaccggtccaggctaccacgtgcgag +ctatatgagctggtcgaggctatggtggagaagggccaggatggctccgccgtgctcgagcttgacctctgt +agccgtgatgtctcgcgtattacatttttccagaaggattgtaataagtttacaacaggcgagaccatcgcc +catggcaaggtgggccagggcatttcggcctggagtaagaccttttgtgctttattcggcccgtggttccgt +gctattgagaaggagattctggctctgcttccacctaatattttctatggtgatgcctacgaggagtcagtg +ttctctgcagccatctctggggctggctccagtatg---gtttttgagaacgatttttctgagtttgatagt +acccaaaacaatttctctct------------------tggccttgagtgtgtcattatggaggagtgtggt +atgccccagtggctcatccggctgtaccatttggttagatcagcctggaccctgcaggccccaaaagagtct +ctgaaaggtttttggaaaaagcactctggcgagcccggcaccctcctttggaacaccgtctggaacatggcg +atcatagcacactgctatgaattccgtgacttgagagtggcagcgtttaagggagatgattcggtggttctc +tgtagtgattatcgccagagccgcaatgcggctactttgatagctggttgtgggttgaaattaaaggttgat +tatcggcctataggcctgtacgccggcgttgtagtggctccgggccttggggcactccccgacgtcgtccgg +tttgctggtcgattatctgagaagaactggggtccgggccctgagcgcgccgaacagttgcgactggcagtt +tgtgattttctccgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccctgggctggtgcataaccttattggcatgctacagactattgctgatgggaaggcccactt +tactgagactgtcaagcctgtactagaccttacaaattctatcatacagaggttggaatgaataacatgtt- +c----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgtttt +gttgctgttcctcgtgtttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcagtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcatatcacaacccggggctggagctcgctctc +gacaaccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgttaac +tgctgtctcaccagcgcctgatacggccccagtccctgatgttgactctcgcggcgctatcctgcgccgcca +gtacaacttgtccacctcccctttgacctcgtctgttgcatctggaaccaatcttgttttgtatgccgcccc +actcaaccctctcctgcctctccaagacggcactaatacccacattatggcgactgaggcgtctaattacgc +ccaatatcgggtcgtccgggctacgatccgctatcgtcctttggtgccgaatgccgtcggtggctatgcaat +ctccatttccttttggccccagaccacaaccacacccacctctgttgatatgaattctattacttctactga +tgttaggattttagtccagcctggcatagcctctgagctggttatcccgagcgagcgccttcactatcgtaa +tcaaggttggcgttctgtcgagacatcgggtgtagctgaggaggaggcgacatcaggcttggtcatgctttg +tattcatggttcccctgttaattcctataccaacacgccctataccggggcgttggggctccttgattttgc +acttgagcttgaatttagaaatttgacccctgggaacaccaacacccgtgtgtcacgctacacgagtacagc +ccgacaccgcctgcgtcgtggtgccgacgggacggccgagctcacaaccactgcagccacacgctttatgaa +ggacctgcatttca---ccgggacaaat---ggtgttggtgaggtaggccgtggtatagccctcacgctatt +taatcttgctgatacgcttctcggtgggctgccgacagaattgatttcgtcggccgggggtcaattgtttta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacttctgtcgagaatgcacagca +ggacaagggcattgccataccacatgatatagacttaggagactctcgtgtggttatacaagactacgataa +ccaacacgaacaggaccggcctaccccgtccccggccccatcccgccccttttcagtccttcgagctaatga +tgtcctgtggctttc-----------------------------tttaaccgcggccgaatatgac------ +cagactacttatggctcatcgaccaaccccatgtatgtctcagacactgtcacatttgt---taatgtagcg +acgggtgcccaggctgtcgcccgttcccttgattggtccaaggtcactctagatggccggccacttactact +at-----ccagcagtactccaagacattttatgttt-tgccgctccgcggcaagctttytttttgggaggct +ggtacgaccaag--gccggctacccttacaattataacactactgctagtgaccagattttgattgaaaatg +cagccggccac------cgtgttgctat-atctacttatacaactagtcttgg--------------tgccg +gccctgtatctgtttc-tgctgttggcgtccttgccccgcattccgctttagctgtgcttgaggatactatt +gact---------accccgcccgtg----cccatacttttgatgatttttgccctgagtgccgtaacc---t +cggcctgcagggctgtgcttttcagtc--------cactattgctgagcttcagcgcct------------- +--------taagatgaaggtaggtaagacccgggagttttaatt-a-tt----tc-ccc--tgt------gt +gccc-cttctagtttgtc-tgta-tt-ct----tt-tt-tctgcgtccgtccgagaaaaact-c-------c +tgctctcctgcagcgcacttgtgtatatctctggctcgtccatcg---------------------ggggcc +aaatagtacc--gaggttggttagcagc-------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355292.1/17273/1-7273 |Hepeviridae isolate HESQL156, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattctgccttggcgaatgctgtggtggttcggccgttcttatcccgtattcagactgatattct +cattaacctgatgcaaccccggcagcttgttttccggcctgaagttctctggaatcacccgatccagcgggt +tatacataatgagttggagcaata---ctgccgagccc-gcgctggccgctgtcttgaggtgggcgctcacc +caagatccatcaatgataactccaatgttctgcaccggtgctttctccgcccggtcggtagagacgtccagc +gctggtattctgcccccactcgtggtccggcggctaactgccgccgctctgcactacgtggtttgccccctg +tcgatcgtacatattgcttcgacgggttttcccgctgtgcttttgccgctgagaccggggttgctttatact +cactgcatgacctttggccctcggacgttgcggaggccatggctcgccacgggatgacgcgattgtatgctg +ccctccaccta-ccccctgaggttttgttaccacctggcacttaccacacaacctcctatcttttgattcac +gacggcaatcgcgccgtcgtgacttacgagggtgatactagtgcgggctataaccacgatgtgtccatactt +cgtgcatggatccgcaccactaaaatagttggtgatcacccactggtaatagagagagtccgcgccatcggc +tgccattttgtcctactccttactgcagcccccgagccatccccaatgccttatgttccgtaccctcgttca +acagaggtgtatgttagatccatatttggtcctggt---------gggtcaccttctcttttcccgtcagcc +t----------gttctactaagtcta-cattccatgccgtcccggtccatatctgggaccggctaatgctct +ttggtgccaccttagatgaccaggccttttgctgctcgcggcttatgacctatctccgtgggattagctata +aagtgactgttggcgcacttgtcgccaacgaaggctggaacgcctctgaggatgcgctcaccgctgtgatca +ctgcagcgtatctgaccatctgccatcagcgctacttacggacacaggccatttctaaaggcatgcgtcggt +tagaggttgagcatgcccaaaagtttatcacaaggctatatagttggctgtttgaaaagtc---------ag +gccgtgactacatccccggtcgccagctccagttttatgcgcagtgccgccgctggctctcggccgggttcc +acctggaccctagagttctcgtttttgacgaggcagtcccttgc---cgctgccggagcttcttaaagaa-- +----ggcttccggaaagttttgttgttttatgaaatggttgggtcagga------gtgcacctgctttttgg +----------------agccagcggaaggcctggttggtgactgtggc--------catgataatgaggcct +atgaggggtctgaggtggaccccgccgagcctgctcaccttgatgtttccgggacctatgcagtttacggcc +gtcagcttgaggctctatatagagcgcttaatatccctgacgacatcgtggctcgtgcgtcacgtctgacgg +ctactgtagaacttgccgccagcccaggccgactcgagtgccgtacagtgcttgggaataagacttttcgca +catcaataactgatggcgcccatcttgaggccaacggtcc------------------------cgagcagt +acgtcttgacatttgatgactcccgccaggctatgggggctgggccacatagccttacgtatgaacttgttc +ccgccggcttgcaagtcaaaatgtcttct-------aatggcctggattgcactgccatattcccc---cct +ggtggggcaccaagtgcagcaccaagtgaagtggcggctttctgtagcgccttatataggtacaatagattc +acccagcgtcattcgctgaccggtgggctatggttgcaccccgaggggcttcttggcctgttcccccctttc +tccccggggcatatttgggagtctgcaaaccccttctgtggtgagagcacactttacacacggacatggtct +acatctggtttctccagcgacttctctccacctgaggtggcctatgctgccccagcacccgacat----ggg +tttaccctcgaatgccccctcgttcgctagtgatat-----------------ttgggcgtt---------- +---------cccaccgccc----tctgagaggt--------------cggcgatcgcttcaccacccgcgat +cccagttagtaagccagctaa---------------------------------------tcctcc------ +------------------------------------------------------------------------ +-aagtcttgc-------------------------------------------------------------- +-------------cacacct----aggccccccgctcgtgagtcacctataccaccaccggctctcaccccg +g---------------------------------------------tcagtgaattagctagcccttctagc +cctactacatacagg-------------------------------------ccttctgcccgtaagtcacc +cacaccacc--------------------------------------accggctcgcactcgccggc----- +-------------------tcctttatacataccctgatggggccaaggtgtatgcaggctctttgtttgag +tcagattgtgactggtttgtcaatgcatctaaccctggccaccgtcctggtggcggtctttgccatgcattt +taccaacgcttcccggagtcat------ttcatccaaccgattttgttatgcgtgaagg---tctcgccgca +tatactctgagcccgcgtccgatcatccatgcagtggcccctgattatagggttgagcagaaccccaagagg +ctggaggcggcatatcgtgaaacctgttcccgcctcggtacagctgcgtatcctctactggggtcagggatt +taccaagtccctgtgagtttaagtttcgacgcctgggagcgtaatcaccgcccaggtgatgaactgtacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaagctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacaccgc +cc------------gcacggctaatcttgcgcttgagattg------------actctgccactgaggtggg +ccgcgcttgc---gccggctgtactattaaccccgggattgtccattaccagttcaccgccggggtccctgg +ctctgggaagtctaggtctatacagcaaggagatgttgatgtcgtggtcgtaccgactcgtgagctccgtaa +cagttggcgacgccgtggttttgctgcctttacaccccacactgcagcccgtgtcactgccggccggcgtgt +ggtgatagatgaggcaccttcgcttccaccgcacttgctgctgctccatatgcagcgagcctcatcggtcca +tctccttggtgatcccaaccagatccctgccattgactttgagcacgccggtttggtcccagcgattcgtcc +tgagttagctcctactagttggtggcatgtcacccaccgctgtcccgccgatgtgtgtgagctcatacgcgg +ggcctaccccaagatccagacgaccagccgtgtgctgagatccttattttggaacgag------cccgcggt +gggtcagaggctggttttcacgcaggcagccaaagcggccaaccccggcgcaatcaccgtccatgaggctca +gggtgccacgtttactgagactactatcatagccacggccgatgctagaggtcttattcaatcctcccgcgc +acatgccatcgttgcgcttacccgccatacagaaaagtgcgtcatcctcgacgctcctggcctgttgcgtga +ggtcggcatttctgatataattgttaataacttc------------------------------ttcctggc +cggtg--gcgaagtgggtcaccatcgcccttcaattataccgcgcggcaacccagaccgaaacttagatac- +-----cctacaggcgttccctccgtcctgccagattagtgcctaccatcaattggctgaagagctgggccac +cggccggcccctgtggccgccgtcctgcctccttgccctgagcttgagcaggggttactctacatgccgcag +gagcttacggtgtccgacagcgtcctaatttttgaactcacggatatagttcactgccgtatggccgccccc +agtcagcgtaaggcggtcctttctacgctcgtcggtaggtacggccgccgaacgaagctgtatgaagctgcc +cattctgatgttcgtgagtctttagggaggtttatccctactatcggcccggtccaggccaccacatgtgag +ttatatgagctggttgaggctatggtggagaagggccaggacggctctgccgtgcttgagctcgacctctgc +agccgtgatgtctcgcgtattacattcttccagaaggactgcaataagtttacaacaggtgagaccattgcc +cacggcaaggtgggccagggcatctcggcttggagtaagaccttctgtgctttattcggcccatggttccgt +gctattgagaaggagatcttggctctgctcccacctaacattttctatggcgatgcctatgaggagtcagtg +ttttctgcagccatttctggggctggctccagtatg---gtttttgagaacgatttctccgagtttgatagc +acccaaaacaatttttctct------------------tggccttgagtgtgttattatggaggagtgtggc +atgccccagtggcttatccgactgtaccatctagttagatcggcctggacattacaagcccctaaagagtct +ctgaaaggtttctggaagaagcattctggcgagcctggcaccctcctttggaacactgtttggaatatggct +atcatagcacactgctatgagttccgcgacctgagggtggcagcgtttaaaggggatgattcagtggttctt +tgcagtgattaccgccagagccgcaatgcggctgccctgatagccggctgtgggttgaaattgaaggttgat +taccggcctataggtttgtatgccggcgttgtagtggccccgggcctcggggcgcttcctgatgttgtccgg +ttcgccggacgactatctgagaagaactggggccctggccccgagcgcgccgaacagttgcgcctagcagtc +tgtgatttccttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggtatgctacagactattgctgatgggaaggcccactt +tactgagactatcaaacctgtgctggatcttacgaattctatcatacagaggttggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gctgttgctcttcgtgtttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcttaccacaatccggggctggagctcgccctc +gacagccggcccg---------------cccccttggctcctcttggcgcgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtttcaccagcgcctgacacggccccggttcctgatgttgactctcgtggtgctatcttgcgccgtca +gtataatttgtccacctctccattaacttcatctgtcgcttccggaactaatcttgtcctgtatgccgcccc +gcttaacccccttctgcctctccaagatggcaccaatactcacatcatggcgactgaggcgtctaattacgc +ccagtatcgggttgttcgggctacaatccgttatcgccctttggtgccgaacgccgtcggtggttatgcaat +ttcaatttctttttggcctcagactacaactacgcccacctctgttgatatgaattccatcacttctactga +cgttaggattttagtccagcctggcatagcctctgagcttgtcatccctagtgagcgccttcactaccgtaa +tcaaggttggcgttctgttgagacatcgggtgtggctgaggaggaggcgacatcaggcctagtcatgctttg +tattcatggctcccctgttaattcctatactaatacaccctatactggggcattagggctccttgactttgc +actcgagcttgaatttagaaatctgacccctgggaacactaatacccgtgtgtcccgatacactagtacagc +ccggcaccgtttgcgccgcggtgccgatgggacagccgagcttacaaccaccgcagccatacgtttcatgaa +ggacttgcatttca---ctgggacaaat---ggagttggtgaggtaggccgcggtatagctctaacgctatt +taatcttgctgatacacttctcggtgggttgccgacagaattgatttcgtcggctggaggtcaactgttcta +ctcccgcccggtcgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggcattgctataccacatgatatagatttaggggattcccgcgtggttatacaagactatgacaa +ccaacatgagcaggaccggcctaccccgtcaccggccccgtcccgccccttctcggtcctccgagccaatga +tgttctgtggctctc-----------------------------tctgactgcggctgaatacgat------ +cagaccacctatggctcgtctaccaaccccatgtatgtctcagatacagtcacttttgt---taatgttgcg +acgggtgcccaggccgttgcccgatcccttgattggtccaaggtcactttggatggccggccacttactacc +at-----acagcagtactccaagacattttatgtac-tgccacttcgtggcaagctttctttttgggaagct +ggcacgaccaag--gctggctacccttacaactataacaccactgctagtgaccagattctgatcgagaatg +cagccggtcac------cgtgttgccat-atctacttataccacaaaaaatgg--------------tgccg +cccccgcggctatttc-aaaaaaaagcgttcttgccccgcattctgctctagctgtgcttgaagatactatt +gatt---------atcctgcccgtg----cccatactttcgatgacttctgccctgagtgccgcaatc---t +cggcctgcagggctgtgctttccagtc--------tactgttgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattaa-tt-----c-ccct-ttt------gt +gccc-cct--------tc-taag-ca-tc----gc-tc-tgt------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355294.1/17232/1-7232 |Hepeviridae isolate HESQL029, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccaccagtttattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcagactgagattct +tatcaatttgatgcaaccccggcagttggttttccgacctgaagtgctctggaatcatcccatccaacgagt +tatccataatgaacttgaacagta---ctgtcgggccc-gggctggtcgttgtctagaggttggggctcacc +caagatccattaatgacaacctaaatgttctgcaccggtgctttctacgaccggttgggagagatgttcagc +gttggtactctgctcctacccgcggccctgcggctaattgccgccgttctgccttgcgtggcctccctcctg +ttgatcgtacatattgttttgatggattctcccgctgctcatttgccgcagaaactggggttgccctttatt +ctctgcatgacctctggccggccgacgttgcggaggctatggcccgacacgggatgacacgcctgtatgctg +cactacatctt-ccccctgaagtactactaccacccggtacttaccatacaacttcataccttctgattcac +gacggtaaccgtgctgttgtgacttacgaaggtgatactagtgcaggctacaaccatgacgtttccatactt +cgtgcatggatccgcacaactaagatagtcggcgatcatccgctggtgatagagcgtgtgcgggccattggc +tgccattttgtgctgctgcttaccgcagcccctgaaccgtcaccaatgccttatgttccatacccccggtcg +acagaggtgtatgtccgctctatattcggccctggt---------gggtccccatccttattcccatcagct +t----------gctccacgaaatcca-catttcacgctgtcccggttcatatttgggaccggctcatgcttt +ttggcgctactctggatgatcaggcgttttgctgctcacgacttatgacctacctccgcgggattagttaca +aggttactgttggcgcccttgtcgctaatgaggggtggaatgcctcggaggacgctcttaccgctgttatta +ctgcagcgtatttgactatttgccatcagcgctacctccgtactcaagctatatccaagggtatgcgccgac +tggaggttgagcatgcccaaaaatttattacaagactttatagttggctgttcgagaagtc---------tg +gccgtgactacattcccggccgccagctccagttttatgcacagtgccgccgttggttatcggcgggttttc +atcttgacccaagggtgcttgtttttgatgagtctgtgccctgc---cgttgtaggacatttcttaagaa-- +----ggctgtgggtaagttctgctgttttatgaagtggttgggacagga------gtgcacctgctttttgg +----------------aaccagcagaaggtctagttggcgaccatggc--------cacgataatgaagcct +atgagggctctgaggtcgatcaggccgagcccgcccaccttgatgtctctggaacttatgccgtccatggcc +gccaacttgaggccctgtatagggcgcttaacatcccgcaggacatcgctgcccgagcctcccgtttgactg +ccaccgtcgaactcgttgcagctccagaccgtttggagtgccgcactgtgcttgggaataagacttttcgga +cgacggtggttgacggcgcccaccttgaggcgaacggccc------------------------cgagcagt +atgttctttcgtttgacgcctctcgtcaatctatgggggccggaccgcatagcctctcctatgagcttactc +ctgctggtttacaggtcaagatttcatct-------aatggcctagactgcactgcaacattcccc---ccg +ggcggggcccctagcgctgctccgggggaggtagcagccttttgcagtgccctctataggtacaacaggttc +actcagcaccattcgcttataggtggcctgtggctgcaccccgaggggttgttgggtattttcccccctttt +tctcccgggcacctctgggagtctgctaaccctttttgtggggaaggaaccctgtacacccgaacatggtcg +acatctggtttttctagcgacttctccccccctgaggcagccgtcgctgcgccggctgctgctcc----ggg +gttacgcc---agcctacacctcctgttagtgacat-----------------ttgggtgtt---------- +---------accgccacct----tctgaagagt--------------ttcaggctgatacagcgcccgctcc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctcctgagcccgctcaaccatccagc +cccgttgggtcaaag-------------------------------------gctcccgtgcgtaaaccgcc +gacgccacc--------------------------------------acctccgcgcacccgccgcc----- +-------------------ttctctacacctatccggatggggcaaaggtgtatgtggggtcactgtttgag +tccgactgtgattggctggttaatgcgtcgaaccccggccatcgtcctggaggtggcctttgccatgccttc +taccaacgctaccccgagtctt------tccacccaactgagttcattatgcgcgacgg---tcttgctgcg +tacactttgactccccggcctattattcatgcagtggctcctgactatagggttgagcataatccaaagagg +cttgaggcagcatatcgagagacttgttctcgccgtggtaccgccgcctacccactcctcggctcgggcata +taccaagtccccgtcagcctcagctttgacgcctgggagcgtaaccaccgccccggggatgagctctaccta +actgaccccgccgccact-------------------------------------------------tggtt +cgaggctaataagccgacaca--------------------------------------------------- +------------------------------------------gccggcccttacaataactgaggatgcagc +cc------------gtacagccaacctagcactggagatcg------------atgctgctacagaggttgg +ccgggcttgt---gccggctgcgcggttagtcctggggttgtgcactatcagtttactgctggggtcccagg +ttcgggaaagtcgcgttctatacaacagggggatgttgacgtagtggttgttcccactcgggagctccggaa +tagctggcgtcgccggggtttcgcggcttttacaccccatacggcggcccgtgtcaccacgggccgtcgtgt +tgtgattgatgaggccccatccctcccaccgcatttgttgctactacacatgcagcgggcctcgtcggtcca +ccttctcggcgacccaaaccagatccctgctatagacttcgagcatgccggcctggttcccgcaatacgccc +tgagcttgcgcccaccagttggtggcatgtcacccatcgctgccccgctgacgtgtgcgagcttatccgcgg +ggcttatcccaaaatccaaaccactagccgcgtgctgcggtctttattctggaatgag------cctgccat +tggccagaagttagtttttacccaggctgctaaggctgccaaccctggtgcgattacagtccacgaggctca +gggcgccactttcacggaaactacaattatagccacggctgatgctagggggctcatccaatcttctcgggc +tcatgccatagtcgcacttactcgtcacacagagaagtgcgttattcttgatgcccccggtttgttacgtga +ggtcggtatatcggatgtgattgtcaacaatttc------------------------------ttcctcgc +tggcg--gggaggtgggtcaccatcgcccctctgtgatacctcgcggcaatcctgaccagaatctcgcgac- +-----gctacaggcctttccaccttcctgccagattagtgcctatcaccagttagctgaggaacttggccac +cgcccagcccccgtcgctgctgtcttgcccccttgccctgaacttgagcagggcttgttatatatgcctcag +gagcttacggtgtctgatagcgtgctggtctttgaactcacggacatagtccactgccggatggccgccccc +agccagcggaaggccgtcctatccacactcgtgggtaggtacggccgtcggacgaagctgtatgaagcagct +cactctgacgtccgtgagtcccttgctagattcatccccaccattgggcctgttcaggctactacgtgtgag +ttatatgagctggttgaggccatggtggagaaaggtcaggatggctctgccgtgcttgagctcgacctttgc +aaccgtgatgtatcgcgtatcacattcttccagaaagattgtaacaaattcaccacaggggagaccattgcc +cacggtaaggtcggccagggcatttcggcttggagtaagactttctgtgccttgtttggtccgtggtttcgt +gctattgaaaaagaaatactagccctgctcccgcctaatattttctacggtgacgcatacgaggagtctgtg +tttgctgccgctgtgtcgggggcaggttcaagcatg---gtgtttgagaatgatttttcagaatttgatagc +acccaaaataacttctccct------------------tggtctcgagtgtgtagtcatggaggaatgtggt +atgccccagtggctaatccggttgtaccatctggttcggtcggcctggatcttacaggcgccgaaggagtct +cttaagggattttggaagaagcactctggtgagcccggcaccctcctctggaacactgtttggaatatggcg +atcatagcacactgctatgaatttcgtgattttagggttgccgcttttaagggagatgattctgtggtcctc +tgcagtgactaccgtcagagccgcaatgcagcagctctgattgcaggttgcgggctcaaactgaaggttgat +tatcgccccattgggttgtatgctggtgtggtggtggcccctggcctggggacgctacccgatgtggtgcgc +tttgccggccggctgtccgagaagaactggggccctgggccggagcgggctgagcagttgcgcctagctgtt +tgtgactttcttcgagggttaacgaatgttgcgcaggtatgtgttgatgttgtatcccgag-------ttta +tggagttagccccgggctggtacataaccttattggcatgttgcaaaccatagctgatggcaaagcccattt +tacagagactgttaaacctgtgcttgacctcactaactctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtaccgcaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgcgatcagtccca----------- +------gcgcccccccgctgtcccacgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgccgtatcacctgctcccgatacagctcctgtgcctgatgttgactcgcgcggcgccatactgcgacgcca +gtacaatttatccacatccccgctcacatcatctgtcgcctcgggtactaatttagttctttatgctgcccc +gctaaaccctttgctgcctcttcaggatggcactaatactcacattatggccactgaggcatccaattatgc +ccagtatcgggttgtccgagctacaattcgttacaggccattggtgccaaatgctgtcggcggctatgcaat +atccatttcattctggcctcagactactaccacccccacgtctgttgatatgaactctattacttctactga +tgttagaattctagttcagcccggtattgcttctgagttggttatccctagtgagcgcctccattatcgtaa +ccagggctggcgctctgtggagacctcgggcgtggctgaggaggaggctacttctggtttagtaatgctttg +tatccatggttctcctgttaattcctacaccaataccccctacaccggggcgcttggactccttgatttcgc +tttagagcttgagtttagaaacctgacacccgggaacaccaacacccgtgtgtcccggtatacaagcacagc +ccgccatcggctgcgccgcggtgctgatggcaccgctgaacttaccaccacagcggccacacgcttcatgaa +ggacctgcacttca---ccggtacgaat---ggggtcggtgaggtgggtcgtggtattgctctcacactctt +taatcttgccgacacgcttctcggtggcttgccgacagaattaatttcgtcggctgggggacagttattcta +ctcccgccccgtcgtctcagccaatggcgagccgactgtcaagttatatacatctgtagagaatgcgcagca +ggataaagggatcgctatcccacatgacatagatctgggtgactcccgtgtggtcatccaagactatgacaa +ccagcacgagcaggatcgacccaccccctcgcctgccccttctcgccctttttcggtccttcgcgctaatga +tgttctatggctttc-----------------------------tcttactgccgccgagtacgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctcggatactgtcacatttgt---caatgtggct +acaggagcccaggctgtcgcccgttccctcgactggtccaaagttaccctggacggccgccctcttactact +at-----ccagcagtactccaaaacattttatgttc-tcccgcttcgcgggaagttatctttttgggaagcc +gggacgaccaag--gccggctacccctataattataacacaactgctagtgatcagattctgatcgaaaatg +cggctggtcac------cgtgttgctat-ctccacctataccactagcttggg--------------tgctg +gccctgtgtctgtttc-tgcagtcggtgttttagccccacactcggctcttgcagtccttgaagacactatt +gact---------accctgcccgtg----cccacacttttgatgatttttgcccggagtgtcgcgctc---t +tggtttgcaggggtgtgccttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaatcaa-tt----tcccttt---t------gt +gccc-cct--------tc-ataa-ctttt----gc-tt---a----------------tttc---------- +ttttttct----gc----------------ggtccccgccccccc---------------------ggaaaa +aaaaaaa---------------aaaaaaaaa----------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355296.1/17317/1-7317 |Hepeviridae isolate HESQL086, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactaccgccattgag---caggctgctctggc +tgcggccaattctgccttggcgaatgctgtggtggttcggccgttcttatcccgtactcagactgatatcct +cattaacctgatgcaacctcggcagctcgtcttccggcctgaagttctctggaatcacccgatccagcgggt +tatacataatgagttggagcaata---ctgcagagccc-gcgctggccgctgtcttgaggtgggcgctcacc +caagatccatcaatgataaccccaatgttctgcaccggtgctttctccgcccggtcggtagagacgtccagc +gctggtactctgcccccactcgtggcccggcggctaactgccgccgctctgcgctacgtggtttgccccctg +tcgatcgtacatattgcttcgacgggttttcccgctgtgcttttgccgctgagaccggggtcgctttatact +cactgcatgacctttggccctcggacgttgcggaggccatggctcgccacgggatgacgcgactgtatgctg +ccctccaccta-ccccctgaggttctactaccacctggcacttatcacacaacctcttatcttctgattcac +gacggcaatcgtgctgtcgtgacctacgagggtgatactagtgcgggctataatcatgatgtgtctatactt +cgtgcttggatccgcaccactaaaatagttggtgatcacccactggtaatagagagagtccgcgccatcggc +tgccattttgttttactccttactgcagcccccgagccatccccgatgccttatgtcccgtaccctcgctca +acagaggtgtatgttagatccatatttggtcctggt---------gggtcaccttctctttttccgtcagcc +t----------gctctactaagtcta-cattccatgccgtcccggtccatatctgggaccggctaatgcttt +ttggtgccaccttagatgaccaggccttttgctgctcgcggcttatgacctatctccgcgggatcagctata +aagtaactgtcggcgcacttgtcgccaacgaaggctggaatgcctccgaggatgcactcaccgctgtgatca +cagcagcgtatctgaccatctgccatcagcgctacttacggacacaggccatttccaaaggcatgcgtcggt +tagaggttgagcatgcccaaaagtttatcacaaggctatatagttggttgtttgaaaagtc---------gg +gccgtgactacattcccggccgccagcttcagttttatgcgcagtgccgccgctggctctcggccggattcc +acctggaccctagagttctcgtcttcgacgaggcggtcccttgc---cgctgccggagcttcttaaagaa-- +----ggttgccggaaaattttgttgttttatgaaatggttgggccagga------gtgcacctgctttttgg +----------------agccagcggaaggcctggttggtgactgtggc--------catgataacgaggcct +atgaggggtctgaggtggaccccgccgagcccgcccaccttgatgtttccgggacctatgcggtccacggcc +gtcagcttgaggctctatatagagcgcttaatatcccggacgacatcgcggctcgtgcgtcacgtctgacgg +ctactgtagaacttgccgccagcccaggccgactcgagtgccgtacggtgcttgggaataagacttttcgca +catcaataactgatggcgcccatctcgaggctaatggtcc------------------------cgagcagt +atgtcttgacatttgatgactcccgccaggctatgggggctgggccacacagccttacgtatgaacttgtcc +ccgccggcttgcaagtcaaaatgtcttct-------aatggcctggattgcattgccatattcccc---cct +ggtggggcacctagtgcagcaccaggtgaagtggcggctttctgtagcgccttatacaggtacaataggttc +acccagcgtcattcgctgaccggtgggctatggttgcaccccgaggggcttcttggcctgttcccccctttc +tccccggggcatatttgggagtctgcaaaccccttttgtggtgagagcacactttatacacggacatggtct +acatctggtttctccagcgacttctccccacccgaggcggcctatgctgccccagcacccgacat----ggg +tctaccctcgggcgccccttcgttcgctagtgatat-----------------ttgggcgtt---------- +---------cccaccgccc----tcagagaggt--------------cggcgattgctccaccacccgtgat +tccacttagtgagccagctaa---------------------------------------tcctcc------ +------------------------------------------------------------------------ +-aagtcctgc-------------------------------------------------------------- +-------------cacacct----aggccccctgttcgtgagtcacctacaccaccgccggctctcaccccg +g---------------------------------------------tcagtgaatcagctagcccgtctagc +cctattacatacagg-------------------------------------cctactgcccgtaagccacc +cacaccact--------------------------------------accggctcgcactcgccggc----- +-------------------tcctttacacataccctgatggggccaaggtgtatgcaggctctttgtttgag +tcagattgtgactggcttgttaatgcatctaaccccggccaccgtcctggtggcggtctttgtcatgcattt +taccaacgcttcccggagtcat------tccacccaaccgattttgtcatgcgtgaagg---tctcgccgca +tatactttgagcccgcgtccgatcattcacgcagtggcccccgactatagggttgagcagaaccccaagagg +ctggaggcggcatatcgtgagacctgctcccgcctcggtacagctgcgtaccctctactggggtcagggatt +taccaagtccctgtgagtttaagtttcgacgcttgggagcgtaaccaccgcccaggtgatgaactgtacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataggccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacactgc +tc------------gcacggctaaccttgcgcttgagattg------------actctgccactgaggttgg +gcgtgcttgc---gccggctgtactattaaccccgggattgtccattaccagttcaccgccggggtccctgg +ctctgggaagtctagatctatacagcaaggggatgttgatgtcgtggtcgtgccgactcgtgagcttcgtaa +cagttggcgacgccgtggttttgctgcttttacaccccacactgcagctcgtgttactgccggtcggcgtgt +ggtgatagatgaggcaccttcgcttccaccgcacttgctgctgctccatatgcagcgagcctcatcggtcca +tctccttggtgatcccaaccagatccctgccatagactttgagcacgctggtttggtcccagcgattcgtcc +tgagttagctcctactagttggtggcatgttacccaccgctgccccgccgatgtgtgtgagctcatccgcgg +ggcctaccctaaaatccagacgaccagccgtgtgttgagatctttattttggaatgag------cccgcggt +gggtcagaggctggttttcacgcaggcagccaaagcggccaaccccggtgcaatcaccgtccatgaggccca +gggtgccacgtttactgagactactatcatagccacggccgatgctagaggtcttattcaatcttcccgcgc +acatgccatcgttgcgcttactcgccacacagaaaagtgcgtcatcctcgacgctcctggcctgttgcgtga +ggtcggtatttctgatataattgttaataacttt------------------------------ttcctggc +cggcg--gtgaagtgggccatcatcgcccttcaattataccgcgtggcaacccggaccgcaacttagatac- +-----cctacaggcgtttcctccgtcctgtcaaattagtgcctaccatcaattggctgaggagctgggccac +cggccggcccctgtggctgccgtcctgcccccttgccctgagcttgagcaggggttactctacatgccacag +gagcttacggtgtccgacagcgtcctgatttttgaactcacggatatagttcactgccgtatggccgccccc +agtcagcgtaaggcggtcctttctacgctcgtcggtaggtacggccgccgaacgaagctgtatgaagctgcc +cattctgatgttcgtgagtctttaggaaggtttatccctactatcggcccggtccaggccaccacatgtgag +ttatatgagctggttgaggccatggtggagaagggccaggatggctccgccgtgcttgagcttgacctctgt +agccgcgatgtctcgcgcattacattcttccagaaggactgcaacaagtttacaacaggtgagactattgcc +cacggcaaggtgggccagggcatctcggcttggagtaagactttctgtgctttattcggtccatggttccgt +gctattgagaaggagatcctggctctgctcccacccaacattttctatggcgatgcttatgaggagtcagtg +ttttctgcggccatttctggggctgcctccagtatg---gttttcgagaacgatttctccgagtttgatagc +acccaaaacaatttttctct------------------tggccttgagtgtgttattatggaggagtgtggc +atgccccagtggcttatccgactgtaccatctagttagatcggcctggactttgcaagcccctaaagagtct +ttgaaaggcttctggaagaagcattctggtgagcctggcaccctcctttggaacactgtttggaatatggct +atcatagcacactgctatgagttccgcgacctgagggtggcagcgtttaagggggatgattcagtggttctt +tgcagtgattatcgccagagccgcaatgcagctgccctgatagccggctgtgggttgaagttaaaggttgat +taccggcctataggtttgtacgccggcgttgtagtggccccgggcctcggggcacttcctgatgttgtccgg +ttcgccggacgactatctgagaagaactggggcccgggccccgagcgcgccgaacagttgcgcctagcagtc +tgtgattttcttcgaaggttgacgaatgttgcgcaggtttgcgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgttacagactattgctgatgggaaggcccactt +tactgaaactatcaaacctgtgctggatcttaccaattctatcatacagaggttggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gctgttgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcttaccacaatccggggctggagctcgccctc +gacagccggcccg---------------cccccttggctcctcttggcgcgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctgac +tgctgtttcaccagcgcctgacacggccccagttcctgatgttgactctcgcggtgctatcctgcgccgtca +gtataatttgtccacttctccattaacttcatctgttgcttctggaactaatcttgtcctgtatgccgcccc +gcttaaccctcttctgcctctccaagacggcactaatactcacatcatggcgactgaggcgtctaattacgc +ccagtatcgggttgtccgggctacaatccgttatcgccccttggtgccgaatgccgtcggtggttatgcaat +ttcaatttccttctggcctcagaccacaactacacccacctctgttgatatgaattccattacttctaccga +tgttaggattttggtccagcctggcatagcctctgagcttgtcatcccgagtgagcgccttcactaccgtaa +tcaaggctggcgttctgttgagacatcgggtgtggctgaggaggaggctacatcaggcctggtcatgctttg +tatccatggctcccctgttaattcctatactaatacaccctatactggggcactagggcttcttgactttgc +actcgagcttgaatttagaaatttgacccctgggaacactaacacccgcgtgtcccgatatactagcacagc +ccggcaccgtttgcgccgcggtgctgatgggacagccgagcttacaaccaccgcagccacacgttttatgaa +ggacttgcatttca---ctgggacaaat---ggagttggtgaggtaggccgcggtatagccctaacgctatt +taatcttgctgatacacttctcggcgggctgccgacagaattaatttcgtcggctggaggtcagctgttcta +ctcccgcccggtcgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggcatcgctataccacatgatatagatttaggggattcccgcgtggttatacaagactatgacaa +ccaacatgagcaggaccggcccaccccgtcgccggccccgtcccgccccttctcggtccttcgagccaatga +tgttctgtggctctc-----------------------------tctgactgcggctgaatacgat------ +cagaccacctatggctcgtctaccaaccccatgtatgtttcagatacagtcacttttgt---taatgtggcg +acgggtgcccaggccgtcgcccgatcccttgattggtccaaggtcactttggatggccggccactcactacc +at-----acagcagtattctaagacattttatgtac-tgccacttcgtggcaagctttccttttgggaagct +ggcacgaccaag--gccggctacccttataactataacactactgctagtgaccagattctgatcgagaatg +cagccggtcac------cgtgttgccat-atctacttataccactagtcttgg--------------ttccg +gccccggatgtgtttc-agcggtcggcgatcttgccccgcattctgctttagctgtgcttgaagatactatt +gact---------atcctgcccgtg----cccatactttcgatgacttctgccctgagtgccgtaatc---t +cggcttgcagggctgtgctttccagtc--------tactgttgctgagcttcagcgtct------------- +--------taaaatgaaggtaggcaaaacccgggagtcttaattaa-tt-----c-ccct-ttt------gt +gccc-cct--------tc-taaa-ct-tt----gc-tt-ggt-------------------a-t-------t +ctctttct----gcg---------------t-----cgcgctcca---------------------gataaa +aaaaaa----------------ggaaaaac------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355302.1/17154/1-7154 |Hepeviridae isolate HESQL187, complete genome +--------------------------------------------------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcatcactactgccattgag---caagctgctctggc +tgcggccaattctgccttggcgaatgctgtggtggttcggccgtttttatctcgtctacagactgagattct +tattaatttgatgcaaccccgacagctggtctttcgacctgaggtgctctggaatcatcctatccaacgtgt +tatacataatgaattggagcagta---ctgccgggccc-gggccggtcgctgtctggaaattggggcccatc +caaggtcaatcaatgataatcctaatgttctgcatcggtgctttttacgaccggtcgggagggatgtccagc +gctggtattccgcccccacccgtggccccgcggccaactgccgccggtctgcgctgcgtggcctcccccctg +tcgaccgcacctactgttttgatggattttcacgctgtgctttcgctgcagagaccggtgtggccctctatt +ctttgcatgatctttggccggctgatgttgcggaggctatggcccgacatgggatgacacgtttgtatgccg +cactacacctc-cccccagaggtactgcttccaccaggcacttaccacacaacctcgtatcttttgatccac +gacggtgaccgcgccgttgtaacttatgagggtgacactagtgcaggctataaccatgatgtttctatactc +cgtgcgtggatccgcacgaccaaaatagtcggtgaccacccgttggttatagaacgagtgcgggccattggt +tgtcattttgtgttgctgctcactgcagcccctgaaccgtcacctatgccatacgtcccgtaccctcggtca +acagaggtgtacgttcgttctatatttggccccggt---------ggttccccgtctctgttcccatcagct +t----------gttctaccaaatcca-cattccacgccgtcccggttcatatttgggatcggctcatgctct +ttggcgccaccctggatgaccaggcgttttgttgctcacggcttatgacataccttcgtgggattagctata +aggtcactgttggcacccttgttgctaatgaggggtggaatgcctctgaagatgccctcaccgctgttatca +ctgcagcgtatttgaccatctgccaccagcgttacctccgcacacaagctatatctaagggcatgcgccggc +tggaggttgaacacgctcagaaattcattacaagactttacagctggctatttgagaaatc---------tg +gccgtgattacatccccggccgtcaacttcaattttatgcacagtgccgtcgttggttatctgcgggtttcc +atcttgacccgcgggtgctcgttttcgatgagtcagtgccttgt---cgctgtaggacgttccttaagaa-- +----agtcgctggcagattctgctgctttatgaagtggttggggcagga------atgtacctgcttcttgg +----------------agccggctgaaggtctggtcggtgatcaaggt--------catgacaatgaagcct +atgagggctcagaggttgatcaggctgagcctgcgctccttgatgtttctgggacatacgctgttcatgggc +gccagcttgaggccctgtacagggcacttaatatccctcatgatatcgccgcccgagcatctcgtttaacgg +ccaccgttgagcttgtcgcaggcccagaccgtttggagtgccgcactgtattagggaacaagactttcagga +caacggtggtcgacggcgcttatctcgaagcaaatggccc------------------------tgagcagt +atgttctttcatttgacgcctcccgccagtctatgggggccgggtcgcacagtctcacctacgagctaactc +ccgctggcttgcaggtgaagatctcgtct-------aacggtctagactgtattgcgacgtttccc---ccg +ggcggtgctcccagtgccgcgccaggtgaggtagccgccttctgcagcgccctttataggtataataggttt +acccagaggcattcgctgacaggcggcttgtggctgcatcccgaggggctgttgggtatttttccccccttc +tcgcccgggcatctttgggagtccgctaatcctttctgcggagagagtactttatatacccggacttggtcc +acatcaggtttttctagtgacttctccccccccgaggtggctgcccctgcgccggttgctgcctt----gga +gccgccct---accccacacctcctgctagtgatat-----------------ctgggtgct---------- +---------gccgccgctt----tccgaggaac--------------atcagattggtgcggtgcctgtctc +ccccg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcttgctcagccgcctagc +cctgtcgagcctaga-------------------------------------ggccccgtgcgtaagccgcc +accaccgtc--------------------------------------accgtctcgcacccgtcgcc----- +-------------------tcctttacacctacccagacggtgccaaggtgtatgcggggtcgctgtttgag +tctagctgtgactggctggttaatgcatcaaatcctggccaccgccctgggggtgggctgtgccatgctttt +tatcaacgctaccccgagtcgt------tccatccgactgagtttatcatgcgtgacgg---tctcgctgcg +tacaccctgacccctcgccctattatccatgcggtggcccctgactatagggtcgagcggaacccaaagagg +cttgaggcggcataccgggaaacttgctctcgccgcggtaccgctgcctacccactcctaggctcgggtatt +tatcaggtccctgtcagcctaagttttgatgcctgggagcgtaaccaccgccctggggacgagctttacttg +actgaccccgctgctacc-------------------------------------------------tggtt +tgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------gccagcccttactataaccgaggatgcagc +tc------------gcacggccaacttggcactggagattg------------atgccgccacggaagttgg +ccgtgcttgt---gctggctgcacagttagtcccggggttgtacattaccaatttaccgctggcgtccctgg +ttcggggaagtctaggtccatacagcagggggatgttgatgtggttgttgttcctacccgagagctccgcaa +tagctggcgccgccggggctttgcggccttcacaccccatacggcggcccgtgtgactctgggccgccgtgt +tgttattgatgaggccccgtccctcccaccacatttgctgttgcttcatatgcagcgggcctcgtcggtcca +tcttcttggcgacccgaaccagatccctgccatagactttgagcatgccggcctggtccccgcaatacgtcc +tgagcttgcacccactagctggtggcatgtcacacaccgctgccccgctgatgtgtgtgagctcatccgcgg +ggcctatccgaagatccagaccacaagccgtgtgttgcggtctctattttggaatgaa------cccgccac +cggacaaaagctagtcttcacgcaggccgctaaggctgctaaccctggtgctattacagtccacgaagccca +gggagctacatttacagagactacaattatagctacggctgacgccaggggcctcattcagtcgtctagggc +ccatgctatagtcgcactcacccgccacacagagaagtgcgttatattggatgcccccggcctgttgcgtga +agtcggcatatctgacataattgttaataatttt------------------------------ttccttgc +tggtg--gggaggtgggccatcatcgcccctctgtgatacctcgtggcagccctggtcagaaccttgaaac- +-----attgcaggccttcccgccttcttgccagatcagtgcttaccaccaactagctgaggaattaggccac +cgaccggctcctgtcgctgcagttttgcccccttgccctgagcttgagcagggcctgttgtacatgccgcag +gagcttacagtgtccgatagcgtgctggtcttcgaactcacggatatagtccattgccgcatggccgcccct +agccagcggaaggctgtcctatcgacacttgtggggaggtatggtcgtagaactaagctgtatgaggccgcg +cattctgatgtccgtgagtccttagccaggttcatccccgctatcgggcctgttcaggccaccacatgcgag +ctgtatgagttggtcgaggccatggtagagaagggccaagacggttccgctgtgttggagctcgacctgtgc +aaccgcgacgtctcgcgtattacatttttccaaaaagattgtaataaattcaccaccggcgagaccattgct +cacggtaaggtcggacagggtatttcagcttggagtaagaccttctgcgccctgtttggcccttggttccgt +gccattgagaaagaaatactggccctactcccacctaacattttctatggcgacgcctacgaggagtctgtg +ttcgctgcagccgtgtctggggcggggacatgcatg---gtatttgagaatgacttctcggagtttgacagt +actcagaataacttctccct------------------cggccttgaatgtgtagtcatggaggaatgtggc +atgcctcagtggttgatccggttgtatcatctgattaggtccgcctggatcttacaggcgccgaaggagtcc +cttaaaggcttttggaagaagcactctggtgagcccggtaccctgctttggaacaccatctggaatatggcg +atcatagcacactgctatgaatttcgcgatttcagagtcgctgccttcaagggcgatgactcagtggtcctt +tgtagcgattatcgccagagccgcaacgctgcggccctgattgcaggctgcgggcttaagttgaaggttgat +taccgtcctatcgggttgtatgctggtgtggtggtggcccccggcttgggaacactgcccgatgtagtgcgc +tttgctggccggctgtctgagaagaactggggtcccggcccggagcgtgccgagcagctgcgtcttgcggtt +tgtgattttcttcgagggttgacgaatgtcgcgcaggtctgtgttgatgttgtatcccgtg-------ttta +cggagttagccctgggctggtacataaccttattggcatgttgcaggccattgctgatggcaaagcccactt +cacagagactgttaaacctgtacttgaccttacaaactctataatacatcggatagaatgaataacatgtc- +t----------------tgtgcatcgcccatggg------------atcgccatgcgcgctagggctgttct +gctgctgttcctcgtgtttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgactggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgccgatgtcgtttcacaacccggggctggagctcgccctc +gacagccgccccg---------------ccctctcggttccacttggcgtgaccagtccca----------- +------gcgcccccccgctgcctcccgtcgtcgacctgcccca---------actggggctgcgccgctgac +tgctgtgtcaccggcccccgacacagcacctgtgcctgacgtcgattctcgcggcgctatattgcgacgaca +gtataatctatctacatccccgctcacgtcatctgttgcttcgggtactaatttggttctttatgctgcccc +gttgaacccccttttacctcttcaggacggcaccaatacacatatcatggctaccgaggcgtctaactatgc +ccagtaccgggttgttcgggccacgattcgttatcgcccgttggtgcctaatgctgtcggtggctatgcaat +ttctatttcgttctggcctcaaaccactaccactcccacatctgtggatatgaattctattacctctaccga +tgttaggattctggttcagcccggcattgcttccgaacttgtcattcctagtgagcgtctccattatcgtaa +ccagggctggcgctctgttgaaacatcaggcgtggccgaggaggaagctacctctggcttggttatgctttg +cattcatggctcccctgttaattcctatactaacaccccttacactggggcgcttgggctccttgactttgc +actagaacttgagtttaggaatttgacacccgggaacaccaacacccgtgtatctcggtacacaagtacagc +ccgccaccggctgcgccgcggtgccgacggcaccgctgagcttactactacggcagccacgcgcttcatgaa +ggacctgcatttta---ccggtacgaac---ggggttggtgaggtgggccgtgggattgctttgacattgtt +caatcttgctgatacacttctaggtggtttgccgacagaattaatttcgtcggccgggggtcagttgttcta +ctcccgccctgtcgtctcagccaatggcgagccgactgtcaagttatatacatctgttgagaatgcacagca +ggataaggggatagctattccacatgatatagatttgggtgactctcgtgtggtgattcaggattatgataa +tcagcacgagcaggaccggcccaccccttcgcccgccccgtctcgtcccttctcggtcctccgcgctaatga +tgttttgtggctttc-----------------------------tctcaccgctgctgagtatgac------ +cagactacgtatgggtcgtccaccaacccgatgtatgtctcagacactgttacatttgt---caatgtggcc +acaggggctcaggctgtcgcccgttctcttgattggtctaaagtcaccctggacggccgccctcttaccacc +at-----ccagcagtactctaagacattttacgtcc-tcccactccgcgggaagctatccttttgggaggct +ggcacaactaaa--gccggttacccttataattataacacaactgctagcgaccagattttgattgagaatg +cggctggccat------cgtgtcgctat-atctacttatactaccagcttggg--------------cgccg +gccctgtgtcggtctc-tgcggtcggtgtattagccccacactcggcccttgctattcttgaagacactgtt +gatt---------atccagcccgcg----ctcacacttttgatgatytctgcccggaatgccgcgccc---t +gggtttgcaggggtgtgcttttcaatc--------tactatcgcggagcttcagcgtct------------- +--------taaaatgaaggtaggcaaaacccgggagttttaattaa-tt--------ctt-ctt------gy +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355304.1/17163/1-7163 |Hepeviridae isolate HESQL166, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagttggttttccgacctgaagtgctctggaatcatcctatccaacgggt +tatccataatgaacttgaacagta---ctgtcgggccc-gggctggtcgttgtttggaggttggggcccacc +caagatccattaatgacaacccaaatgttctacatcggtgctttctacgaccggttgggagagatgttcagc +gctggtactctgctcctacccgtggccctgcggctaactgccgccgttctgccttgcgtggcctcccccccg +ttgatcgtacctattgttttgatggattctcccgctgctcatttgctgcagaaactggggttgccctttact +ctctgcatgacctctggccggccgatgtcgcggaggctatggcccggcacgggatgacacgcttgtatgctg +cactacatctc-ccccccgaagtactactaccacccggtacttatcatacaacttcataccttctgattcac +gatggtaatcgtgctgttgtgacctatgaaggtgatactagtgcaggctacaaccatgatgtctccatactt +cgtgcatggatccgcacaactaagatagtcggcgatcatccgctggtgatagagcgtgtgcgggctataggc +tgtcactttgtgctgctgctcactgcagcccctgagccgtcaccaatgccttatgttccatacccccggtcg +acagaggtgtatgtccgctctatattcggccctggc---------gggtccccatccctattcccatctgct +t----------gctctacgaaatcca-catttcacgctgtcccggttcatatttgggaccggctcatgcttt +ttggcgccactttggatgatcaggcgttttgctgttcacggcttatgacctatctccgtgggattagttaca +aggttactgttggcgcccttgtcgctaacgaggggtggaatgcttcggaggacgctcttaccgctgttatta +ctgcagcgtatttaaccatttgtcatcagcgttacctccgtactcaagctatatccaagggtatgcgtcgac +tggaggttgagcatgctcaaaagtttattacaagactttacagttggctgttcgagaagtc---------cg +gccgtgattatatccccggccgccagctccagttttatgcacagtgccgccgttggttatcggcgggtttcc +atcttgacccaagggtgcttgtctttgatgagtctgtgccctgc---cgttgtaggacatttcttaagaa-- +----ggctgtgggtaagttctgttgttttatgaagtggttagggcagga------gtgtacctgctttttgg +----------------aaccagcagagggtctagttggcgaccatggc--------cacgataatgaagcct +atgagggctctgaggtcgatcaggctgagcccgcccatcttgatgtttctgggacttatgccgtccatggcc +gccaacttgaggccctgtatagggcgcttaacatcccgcatgacatcgctgcccgagcctcccgtttgactg +ccaccgtcgaactcgtcgcaggtccagaccgcttggagtgccgcactgtgctcgggaataagactttccgga +cgacggtggttgatggcgcccatcttgaggcaaacggccc------------------------cgagcagt +acgttctttcgtttgacgcctctcgccagtccatgggggccggaccgcatagtctctcctacgagctcactc +ctgctggtttgcaggtcaagatttcatct-------aatggcctggattgcactgcaacattccct---ccg +ggcggggcccctagcgctgctccgggggaggtggcagccttttgcagtgcccttcacaggtacaacaggttc +actcagcgccattcgcttataggtggtttgtggctgcaccctgaggggttgttgggtatcttccctcctttc +tctcccgggcacctctgggagtccgctaaccctttctgtggggagggaaccttgtacacccggacatggtca +acatctggtttttctagtgatttttccccccctgaggcagccgttgcagcgccgactgctgcccc----ggg +gttacgtc---accctacacctcctgctagtgacat-----------------ttgggtgtt---------- +---------accgccgcct----tctgaagaat--------------ttcaggctgacacagcgcccgtctc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcctgctcatccacctagc +cccgtagggccgaag-------------------------------------gctcccgtgcgtaagccgcc +aacgtcacc--------------------------------------gcccccgcgcacccgccgtc----- +-------------------ttctctatacctatccggatggggcaaaggtgtatgcggggtcactgtttgag +tctgactgtgactggctggttaatgcgtcgaaccccggccatcgtcctggaggcggcctttgccatgctttc +taccaacgctaccccgaatctt------tccatccaactgagttcattatgcgcgacgg---tcttgccgcg +tatactttaactccccggcctattattcatgcagtggctcctgattatagggttgagcacaacccaaagcgg +cttgaggcagcataccgagagacttgttcccgccgcggtaccgccgcctacccactcctcggctcgggtata +tatcaagtccccgtcagcctcagctttgatgcctgggagcgtaaccaccgccccggggacgagctctacctg +accgacctcgcagctacc-------------------------------------------------tggtt +cgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------gccagccctcacaataactgaggatgcagc +cc------------gcacagccaacctagcactggagatcg------------atgctgctacagaggtcgg +ccgggcctgt---gccggctgtacagttagtcctggggttgtgcactatcagttcactgctggggtcccagg +ttcggggaagtctcgctctatacagcagggggatgttgacgtagtggttgttcccacccgggagctccggaa +tagttggcgtcgccggggtttcgcagcttttacacctcatacggcggcccgtgtcaccacgggccgtcgtgt +tgtgattgatgaggccccatccctcccaccgcatctgctgctactacacatgcagcgggcctcgtcggtcca +tcttctcggcgacccgaaccagatccctgccatagacttcgagcatgccggcctggtccctgcaatacgtcc +tgagcttgcgcccaccagttggtggcatgtcacccatcgctgccccgctgatgtgtgcgagcttatacgcgg +ggcttatcccaaaatccaaaccaccagccgcgtgctgcggtctttattctggaatgag------cctgccat +tggccagaagttagttttcacccaggctgctaaggccgccaatcctggtgcgattacagtccacgaggccca +gggcgccactttcacggaaactacaatcatagccacagctgatgctagagggctcatccaatcttcccgagc +tcatgccatagtcgcacttacccgccacacagagaagtgcgttattcttgacgcccccggcttgttacgcga +ggttggtatatcggatgtgattgtcaacaatttt------------------------------ttcctcgc +cggcg--gggaagtgggtcaccatcgcccctctgtgatacctcgcggtaatcctgaccagaacctcgcgac- +-----actacaggcctttccaccttcctgccagattagtgcctatcatcagttagctgaggaacttggccac +cgcccagcccccgttgctgctgttctccccccttgtcctgagcttgaacaaggcttgttatatatgccgcag +gagctcacagtgtctgatagcgtgcttgtctttgaactcacggacatagtccactgccggatggctgccccc +agccagcggaaggccgtcctatcgacgctcgtaggtaggtacggccgtcggacgaagctgtatgaagcagct +cactctgatgtccgtgagtccctggctaggttcatccccaccattgggcccgttcaggctactacgtgtgag +ttatatgagctggttgaagccatggtggagaaaggtcaggatggctctgccgtgcttgagctcgacctctgc +aatcgtgatgtatcacgtattacatttttccagaaagattgtaataaattcaccacaggggagaccattgcc +cacggtaaggtcggccagggcatttcggcttggagtaagaccttctgtgccctgtttggtccgtggttccgt +gctattgaaaaagaaatactagccttgctcccgcctaatattttctacggcgatgcatatgaggagtctgtg +tttgccgccgctgtgtcgggggcagattctagcatg---gtatttgaaaatgatttttcagagtttgatagc +acccaaaataacttctccct------------------cggtctcgagtgtgtagtcatggaggaatgtggc +atgccccagtggctaattcggttgtaccatctggttcggtcggcctggatcctacaggcgccgaaggagtct +cttaagggattttggaagaagcattctggtgagcccggtaccctcctctggaacactgtttggaatatggcg +atcatagcacactgctatgaatttcgtgattttagggttgccgctttcaagggagatgattccgtggtcctc +tgtagcgactaccgccagagccgcaacgcagcggctctgattgcaggttgcgggctcaaactgaaggttgat +taccgccctattgggttgtatgctggtgtggtggtggcccccggtttggggacgttacccgatgtggtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggctgagcaattgcgcctagctgtt +tgtgacttccttcgagggttaacgaatgttgcgcaggtatgtgtcgatgttgtatcccgag-------ttta +tggagttagtcctgggctggtacataaccttattggcatgttgcaaaccatagctgatggcaaggcccattt +tacagagactgttaaacctgtgcttgacctcacgaactctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgttgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtaccgcaacccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgtctcacgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgccatatcacctgcccctgatacagctcctgtacctgatgttgattcgcgcggcgctatattgcgacgcca +gtacaatttatccacatccccgcttacatcatctgttgcttcgggtactaatctggttctttatgccgcccc +gctaaatcctttgctgccccttcaggatggtactaacactcatattatggccactgaggcatctaattatgc +ccagtatcgggttgttcgagctacgatccgttacaggccattggtgccaaatgctgtcggtggctatgcaat +atccatatcattctggcctcagactactactacccccacgtctgttgatatgaattctattacttccactga +tgttaggattttagtccagcctggcattgcttctgagttggttatccctagtgagcgcctccattatcgtaa +ccagggctggcgctctgtggagacctcgggtgtggccgaagaggaggctacttctggtttagtaatgctttg +tatccatggctcccctgttaattcctacaccaataccccctatacaggggcgcttgggctccttgatttcgc +tttagagctagagtttaggaacctgacacccgggaacaccaacacccgtgtgtcccggtatacgagcacagc +ccgtcatcggctgcgccgcggtgctgatggcaccgctgaacttaccaccacagcggccacgcgcttcatgaa +ggacctgcacttca---ccggtacgaat---ggggtcggtgaggtgggtcgtggtattgctctcacactctt +taatcttgctgacacgcttctcggtggtttgccgacagaattaatttcgtcggctggggggcagctattcta +ctcccgccccgtcgtctcagccaatggcgagccgactgtcaagctatatacatctgtagagaatgcgcagca +ggataaagggatcgctatcccacatgacatagatctaggtgactcccgtgtggtcattcaagactatgacaa +ccagcatgagcaggatcgacccactccctcacctgccccttctcgccccttttcggttcttcgcgctaatga +tgttctatggctttc-----------------------------tcttactgccgccgagtacgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctcggataccgtcacatttgt---caacgtggcc +acaggagcccaggctgtcgcccgttccctcgactggtctaaagttactctggatggccgccctctcacgacc +at-----ccagcagtactccaaaacattttatgttc-tcccgcttcgtgggaagttatccttctgggaggct +gggacaactaag--gctggctacccctataattacaacacaactgctagtgaccagattttgattgaaaatg +cagctggtcat------cgtgttgccat-ttttacgtataccaccagcttggg--------------cgctg +gccctgtgtctgtctc-tgcagttggtgttttagctccacattcggctcttgcagtccttgaagacactatt +gact---------accctgcccgtg----cccacacttttgatgatttctgtccggagtgtcgcgctc---t +tggtttgcaggggtgcgccttccaatc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaatcaa-tt----t--cctt---t------gt +gccc-cc----------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355305.1/17243/1-7243 |Hepeviridae isolate HESQL068, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattctgccttggcgaatgctgtggtggttcggccgttcttatcccgtactcagactgatatcct +cattaacctgatgcagccccggcagcttgttttccggcctgaagttctctggaatcacccgatccagcgggt +tatacataatgagctggagcaata---ctgccgagccc-gcgctggccgttgtcttgaggtgggcgctcacc +caagatccatcaatgacaaccccaatgttctgcaccggtgctttctccgcccggtcggtagagacgtccagc +gctggtattctgctcccactcgtggtccggcggccaactgccgccgctctgcgctacgtggtttgccccctg +tcgatcgtacatattgcttcgacgggttttcccgctgtgcttttgctgctgagaccgggattgctttatact +cactgcatgatctttggccctcggatgttgcggaggccatggctcgccacgggatgacgcgattgtatgctg +ccctccatcta-cctcctgaggttctgttaccacctggcacttaccacacaacctcctatcttttgattcac +gacggcaatcgtgccgtcgtgacttacgagggtgatactagtgcgggctataatcacgatgtgtctatactt +cgtgcatggatccgcaccactaaaatagttggtgatcacccactggtaatagagagagtccgcgccatcggc +tgccattttgtcctactccttactgcagcccccgagccatccccaatgccttatgtcccgtaccctcgctca +acagaggtgtatgttagatccatatttggtcctgga---------gggtcaccttctctttttccgtcagcc +t----------gctctaccaagtcta-cattccatgccgtcccggtccatatctgggaccggctaatgctct +ttggtgccaccttggatgaccaggccttttgctgctcgcggcttatgacctacctccgtgggattagctata +aagtgactgttggcgcacttgtcgccaacgaaggctggaatgcctccgaggatgcgctcaccgctgtgatta +ctgcagcgtatttgaccatctgccatcagcgctacctacgaacacaggccatttccaaaggcatgcgtcggt +tagaggtcgagcatgcccaaaagtttatcacgaggttatatagttggctgtttgaaaagtc---------ag +gccgtgactacatccccggtcgccagctccagttttatgcgcagtgccgccgttggctctcggccggattcc +acctggaccctagagttctcgttttcgacgaggcggtcccttgc---cgctgccggagcttcttaaagaa-- +----agttgccggaaaattttgttgttttatgaaatggttgggccagga------gtgcacctgctttttgg +----------------agccagcggaaggcctggttggtgactgtggc--------catgataacgaggcct +atgaggggtctgaggtggaccccgctgagcctgctcaccttgatgtttccgggacctatgcggtccacggcc +gtcagcttgaggctctatatagagcgcttaatatcccggacgacatcgcggctcgtgcgtcacgtctgacgg +ctactgtagaacttgccgccagcccaggccgactcgagtgccgtacggtgcttgggaataagactttccgca +catcaataacagatggcgcccatctcgaggccaacggtcc------------------------cgagcagt +acgtcttgacatttgatgactcccgccaggctatgggggctgggccacacagccttacgtatgaacttgtcc +ccgccggcttgcaagttaaaatgtcttct-------aatggcctggattgcactgccatattcccc---cct +ggtggggcaccaagtgcagcaccaggtgaagtggcggccttctgtagtgccttatacaggtacaataggttt +acccagcgtcattcgctgaccggtgggctatggttgcaccccgaggggcttcttggcctgttcccccctttt +tcaccggggcatacttgggagtctgcgaaccccttttgtggtgagagcacactttacacacggacatggtct +acatctggtttctccagcgacttctccccacctgaggcggcttatgccgccccagcacccgacat----ggg +gctaccctcgggcgccccctcgtccgctagtgatat-----------------ctgggcgtt---------- +---------cccaccgccc----tctgagaggt--------------cagcgatcgctccaccacccgtgat +ctcagttagtaagccagctaa---------------------------------------tcctcc------ +------------------------------------------------------------------------ +-aagtcctgc-------------------------------------------------------------- +-------------cacacct----agtccccccgttcgtgagccacctacatcaccattggctctcaccccg +g---------------------------------------------tcagtgtaccagctagcctgtctagt +cctactacatgcagg-------------------------------------ccccctgcccgtaagccacc +cacaccacc--------------------------------------accggctcgcactcgccggc----- +-------------------tcctttatacataccctgatggggccaaggtgtatgcgggctctttgtttgag +tcagattgcgactggcttgttaatgcatctaaccctggccaccgtcctggcggcggtctttgccatgcattt +tatcaacgcttcccggagtcat------tccacccaaccgattttgtcatgcgtgaggg---tctcgctgca +tatactctgagcccgcgtccgatcattcacgcagtggcccctgattatagggttgagcagaaccccaagagg +ctggaggcggcatatcgtgagacctgctcccgcctcggtacagctgcgtatcctctactggggtcagggatt +taccaagtccctgtgagtttaagtttcgacgcctgggagcgtaaccaccgcccaggtgatgaactgtacctt +actgagccagctgctgcc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccttaacaattactgaggacgccgc +cc------------gcacggctaaccttgcgcttgagattg------------actctgccactgaggtggg +ccgtgcttgc---gccggctgtactattagccccgggattgtccattaccagttcaccgccggggtccctgg +ctctgggaagtctaggtccatacagcaaggggatgtcgatgtcgtggtcgtaccaactcgtgagctccgtaa +cagctggcgacgccgtggttttgctgcttttacaccccacactgcagctcgtgttactgccggccggcgtgt +ggtgatagatgaggcaccttcgcttccaccgcacttgctgctgcttcatatgcagcgagcctcatcggtcca +tctccttggcgaccccaaccagattcctgccattgactttgagcacgctggtctggtcccagcgattcgtcc +tgagctagctcctactagttggtggcacgtcacccaccgctgccccgccgatgtgtgtgagctcatacgcgg +ggcctaccctaagatccagacgaccagccgtgtgtcgagatctttattttggaacgag------cctgcggt +gggtcagaggctggttttcacgcaggcggccaaagcggccaaccccggcgcaatcaccgtccatgaggctca +gggtgccacgtttactgagactactatcatagccacggccgatgctagaggtcttatccaatcttcccgcgc +acatgccattgttgcgcttactcgccacacagaaaagtgcgtcatcctcgacgctcctggcctgttgcgcga +ggtcggcatctctgatataattgttaataacttt------------------------------ttcctggc +cggtg--gtgaagtgggccaccatcgcccttcaattataccgcgcggcagcccagaccgaaacttagacac- +-----cctacaggcgttccctccgtcctgccaaattagtgcctatcatcaattggctgaagagctgggccac +cggccggcccctgtggccgccgtcctgcccccctgccctgagcttgagcaggggttactctatatgccgcag +gagcttacggtgtccgacagcgtcctaatttttgaactcacggatatagttcactgccgcatggccgccccc +agtcagcgtaaggcggtcctttctacgctcgtcggtaggtacggccgccgaacgaagctgtatgaagctgcc +cattctgatgttcgtgagtctttaggaaggtttatccctactatcggtccggtccaggccaccacatgtgag +ttatatgagctagttgaggccatggtggagaagggtcaggacggctccgccgtgcttgagctcgacctctgt +agccgtgatgtctcgcgtattacgttcttccagaaggattgtaataaatttacaacaggtgagaccattgcc +cacggcaaggtgggccagggcatttcggcttggagtaagactttctgtgctttattcggtccatggttccgt +gctattgagaaggagatcctggctctgctcccacccaacattttttatggcgatgcctatgaggagtcagtg +ttttctgcagccatttctggggctggctccagtatg---gtttttgagaacgatttctccgagtttgatagc +acccaaaacaatttttctct------------------tggccttgagtgtgtcattatggaggagtgtggc +atgccccagtggcttatccgactgtaccatttagttagatcggcctggactttgcaagcccctaaagagtct +ttgaaaggtttctggaagaagcattccggcgagcctggcaccctcctctggaacactgtttggaatatggct +atcatagcacactgctatgagttccgcgacctgagggtggcagcgtttaaaggggacgattcggtggttctt +tgcagtgattaccgccagagccgcaatgcggctgccctgatagccggctgtgggttgaaattgaaggttgat +taccggcctataggtttgtatgccggtgttgtagtggctccgggcctcggggcacttcctgatgttgtccgg +ttcgccggacgactatctgagaagaactggggcccgggccccgagcgcgctgaacagttgcgcctagcagtc +tgtgatttccttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacagactattgctgatgggaaggcccactt +tactgagactattaaacctgtgctggatcttacgaattctattatacagaggttggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------gtcgccatgcgccctagggctgttct +gctgttgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcctaccacaatccagggctggagctcgccctc +gacagccggcccg---------------cccccttggctcctcttggcgcgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtttcaccagcgcctgacacggctccagttcctgatgttgactctcgtggtgctattttgcgccgcca +gtataatttgtccacctctccattaacttcatctgttgcttctggaactaatcttgtcctgtatgccgcccc +gcttaaccctcttctgcctcttcaagacggcactaatacccatatcatggcgactgaggcgtctaattacgc +ccagtatcgggttgtccgggctacaatccgttatcgccctttggtgccaaatgccgtcggtggttatgcaat +ttcaatttccttctggcctcagactacaactacacctacctctgttgatatgaattccatcacttctactga +tgttaggattttagtccagcctggcatagcctccgagcttgttatcccgagtgagcgccttcactaccgcaa +tcaaggctggcgttctgttgagacatcgggtgtggctgaggaggaggcgacatcaggcctggtcatgctttg +tattcatggctcccctgttaattcctataccaacacaccctatactggggcattagggctccttgattttgc +actcgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccggtacactagtacagc +ccggcaccgtttgcgccgcggtgccgatggaacagccgagcttacaaccaccgcagccacacgttttatgaa +ggacttgcatttca---ccgggacgaat---ggggttggtgaggtaggccgcggtatagccctaacgttatt +caatcttgctgatacacttctcggcgggttgccgacagaattgatttcgtcggctggaggtcaactgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggcattgctataccacatgatatagatttaggggattcccgtgtggttatacaagactatgacaa +ccaacacgagcaggaccggcctaccccgtcgccggccccgtcccgccccttctcggttcttcgagccaatga +tgttctgtggctctc-----------------------------tctgactgcggctgaatacgat------ +cagaccacctatggctcgtctaccaaccccatgtacgtttcagatacagtcacttttgt---taatgtggcg +acgggtgcccaggccgttgcccgatcccttgattggtccaaggtcactttggatggccggccactcactacc +at-----acagcagtactctaagacattttatgtac-tgccacttcgtggtaagctttccttttgggaagct +ggcacgaccaag--gctggttacccttacaactataatactactgctagtgaccagattctgatcgagaatg +cagccggtcac------cgtgttgccat-atctacttataccactagtcttgg--------------tgccg +gccctgtgtctgtttc-tgcggtcggcgttcttgctccgcattctgtcttagctgtgcttgaagatactatt +gact---------atcccgcccgtg----cccatacttttgatgatttctgccctgagtgccgcaatc---t +tggcttgcagggctgtgctttccagtc--------tactgttgctgagcttcagcgtct------------- +--------taaaatgaatgtaggtaagacccgggagtcttaattac-tt-----c-ccct------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355306.1/17266/1-7266 |Hepeviridae isolate HESQL080, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggtccggccgtttctatctcgtgctcaaactgatatcct +tattcatttgatgcaaccccggcagcttgtgttccgacctgaagtcctctggaaccacccgatccagcgagt +tatacataatgagctggagcaata---ctgccgagccc-gtgctggccgttgtcttgaggtgggcgctcacc +caagatctattaatgataaccccaatgttctacaccggtgcttcctccgcccggtcggaagagacgtccagc +gctggtactctgcccccactcgtggtccagcggctaactgccgccgctctgcgctgcgcggtttgccccctg +tcgatcgcacatactgcttcgacgggttctcccgctgcgcctttgccgctgagaccgggattgctctatact +cactgcatgatctttggccctcggacgttgcggaggctatggcccgccacgggatgacgcgtttgtacgctg +cccttcattta-ccccctgaggtcctgttaccacctgggacttaccacacaacctcctatcttctgattcac +gacggcaatcgtgccgtcgtgacttatgagggggataccagtgcgggctacaaccatgatgtgtctatactt +cgcgcatggatccgcaccactaaaatagttggtgaccacccactggtaatagaaagggttcgcgccatcggc +tgccattttgttttacttcttaccgcagcccctgagccgtctccgatgccttatgttccgtaccctcgctca +acagaggtgtatgttagatctatattcggccctggt---------gggtcgccttctcttttcccatcagcc +t----------gctctactaaatcta-catttcatgccgtcccggttcatatctgggaccggctcatgcttt +ttggcgccaccctagatgaccaggccttctgctgctcgcggcttatgacctatctccgcgggattagctata +aagtgaccgttggcgcacttgtcgccaacgagggctggaatgcctcggaggatgcgcttaccgccgtgatca +ccgcagcgtatttgaccatctgccatcagcgctacctacggacacaggccatctccaaaggcatgcgtcggc +tagaggttgagcacgcccaaaaatttatcacaagattatacagctggttgttcgaaaagtc---------ag +gccgtgactacatccccggtcgccagctcgagttttatgcacagtgccgccgttggctctctgctggttttc +atctagaccctagagttcttgtctttgacgaggcggtcccctgc---cgctgccggagcttcttgaagaa-- +----agtcgccggaagattttgctgctttatgaaatggttggggcagga------gtgcacttgttttttgg +----------------agccagcggaaggcctggttggtgactgtggt--------catgataatgaggctt +atgaggggtctgaggtggaccccgccgagtctgctcaccctgatgtttccgggacctatgcggtccatggcc +gacagcttgaggctctatatagggcgctcaatgtcccggatgatattgtagcccgtgcgtcacgcctgacag +ctactgtggaacttgtcgccagcccaggccgactcgagtgccggacagtgcttgggaacaagacctttcgta +catcaataaccgatggtgctcagctcgaagctaacggacc------------------------cgagcagt +acgtcttgacatttgacgactctcgccaggcaatgggggccgggtcccatagcctcacgtatgaacttgtcc +ctgccggtctgcaggttaaaatatcctct-------aatggcctggattgtaccgctatattccct---cct +ggcggggcgccaagtgctgcaccaggtgaagtggcggctttttgcagcgccctatataggtacaataggttt +acccagcgccattcgctgaccggtgggctgtggctgcaccctgaggggctacttggtctgttcccccctttt +tctccggggcacctctgggagtctgcgaaccccttctgcggtgagagcacactttatacacgaacctggtct +acatctggtttctctagcgacttttccccgcccgaggcggcttatgccgccccagtccctgacgt----tgg +gttaccctcgggtgccccctcgtctgttagtgatgt-----------------tcgggtgtt---------- +---------cccaccgccc----tctgaggggt--------------cggcgatcgtttcgccacccgaaac +ctcgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtaagccagctaacccgccttgt +tctactatacctaga-------------------------------------ccccccgtccgtaagccacc +tacaccatc--------------------------------------accggctcgcacccgtcggc----- +-------------------tcctttatatgtatcctgatggggccaaggtgtatgcaggctctttgttcgag +tcaggttgtgactggctggtcaatgcatctaaccccggccaccgccctggcggtggcctttgtcatgcattt +tatcagcgtttcccggagtcat------tccacccgactgattttgtcatgcgtgaggg---tcttgctgcg +tacactttgagcccgcggccaatcatccatgctgtggcccccgactatagggttgagcagaaccccaagagg +ctggaggcggcatatcgtgagacctgctcccgcctcggcacggctgcctacccgctactagggtcggggatt +taccaggtgcccgtaggcttaagtttcgacgcctgggagcgcaaccaccgccctggcgatgaactttacctt +actgagccggctgccgcc-------------------------------------------------tggtt +tgaggctaacaagccaaccca--------------------------------------------------- +------------------------------------------gccagctttaacaattactgaagacactgc +cc------------gcacagccaaccttgcgcttgagatag------------actccgccaccgaggtggg +tcgtgcttgc---gcaggctgtactattaaccccgggattgttcattaccagttcaccgccggggttcctgg +ctccgggaagtctaggtctatacagcagggggatgttgatgtcgtagtcgtgccaacccgtgagcttcgtaa +cagttggcggcgccgcggcttcgctgcttttacaccccatacagcagctcgtgttaccgccggtcggcgtgt +ggtgatagatgaggcaccttcgcttccaccgcatttgctgttgctccatatgcagcgggcctcatcggttca +cctccttggcgaccccaaccagattcccgctattgactttgagcatgccggtttagtcccagcgatccgccc +tgagcttgcccccactagctggtggcacgttacccatcgctgtcccgctgatgtgtgtgaactcatacgcgg +ggcttaccccaagattcagacgaccagccgtgtgttgcggtctctattttggaatgag------cctgcggt +gggccagaggctggttttcacgcaggcagccaaggcggccaaccccggtgcaattactgttcacgaggccca +gggcgccacgttcacggagaccaccatcatagccacggccgatgctagaggtcttattcagtcttctcgtgc +acatgccatcgttgcacttacccgtcatacagagaaatgcgtcattctcgacgcccccggcctattgcgtga +ggtcggcatttctgatataattgttaataacttt------------------------------ttcctggc +tggtg--gcgaagtgggtcatcatcgcccctctactataccccgtggcaatccagaccagaacttagacac- +-----cctacgagccttccccccgtcctgccaaattagtgcctatcatcagctggccgaggagctgggccat +cggccggccccagtagccgccgtcctgcccccctgccctgagcttgagcagggcctactctacatgccgcag +gagcttacggtgtctgatagcgtcctaatttttgaacttacggacatagttcactgccgcatggccgccccc +agccaacgtaaggcggtcctttcgacgctcgttggtaggtatggccgccgaacgaagttgtacgaagcggcc +cattctgacgttcgtgagtctttagggaggttcattcccaccatcggacgggttcaggccaccacgtgtgaa +ttatatgagctggttgaggctatggtggagaagggccaggacggctctgccgtgctcgagcttgacctctgc +agccgtgatgtctcgcgtattacattcttccagaaggattgtaataaatttacaacaggtgagactattgcc +cacggcaaggtgggccagggcatttcagcttggagtaagaccttctgtgccttattcggcccgtggttccgt +gccattgagaaggagattctggctctgcttccacccaatattttctatggcgatgcctatgaggagtcagtg +ttttctgcagctatctctggggctggctccagtatg---gtcttcgagaacgatttttctgagtttgatagc +acccaaaacaatttttctct------------------cggccttgaatgtgctattatggaagagtgtggc +atgcctcagtggttagtccgcctgtatcacctggttaggtcagcctggactttgcaagccccgaaagagtct +ttgaaaggtttttggaagaagcactctggcgagcctggtaccctcctttggaacaccgtctggaatatggcg +atcatagcacactgctacgaattccgtgatttgagagtagcagcgtttaagggggatgattcagtggttctt +tgcagtgattaccgccagagccgcaatgcggccactctgatagccggttgcgggttgaagctgaaggttgat +tatcggcccgtaggtctgtatgccggcgttgtagtggctccgggcctcggggcacttcctgatgttgtccgg +tttgccggtcgattatctgagaagaactggggcccgggtcctgagcgcgccgaacagttgcgtttagcggtt +tgtgattttcttcgagggctgacgaatgtcgcgcaggtttgtgttgatgttgtgtcccgcg-------tcta +tggggttagccccgggctggtgcataaccttattggcatgctacagactattgctgatggaaaggcccattt +taccgagactgtcaagcctgtgctggatcttacaaactctatcatacagaggttggaatgaataacatgtt- +c----------------tgtgcatcgcccatggg------------atcgccatgtgccctagggctgttct +gttgctgttcttcgtgcttttgcctatgctgcccgcgt---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaatccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgatcagtccca----------- +------gcgcccccccgccgccccccgtcgtcgatctacccca---------gctggggctgcgccgctaac +tgctgtatcacccgcgcctgatacggccccagtccctgatgttgactctcgcggtgctattctgcgccgcca 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+tcaacatgagcaggaccggcctaccccgtcgccggccccgtctcgccccttttcagtccttcgagctaatga +tgttttgtggctctc-----------------------------tttgaccgcggctgaatacgac------ +cagactacttatggctcgtcgaccaaccctatgtatgtttcagatactgtcacatttgt---taatgtggcg +acaggtgctcaggctgtcgcccgttcccttgattggtccaaggtcactttggacggccggccactcaccacc +at-----ccagcagtactctaagacattctatgtgc-tgccgcttcgtggcaagctttccttttgggaagct +ggtacgactaag--gctggttacccttataattacaataccactgctagtgaccagattttgatcgagaatg +ctgctggccac------cgtgttgccat-atctacttataccactagtcttgg--------------tgccg +cgcctgtgtctgaatc-tgctgtaggtgttcttgctccacactctgctttagctgtacttgaggacactatt +gact---------accctgctcgtg----cccatacttttgatgatttctgccctgagtgccgtagtc---t +tggcctgcagggctgcgccttccagtc--------tactgttgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-ctt---cc-ccc--cct---ttggt +gccc--------------------ct-ct----ac-tt-ctt----------------tgta-t-------t +ctttttct---------------------------gcgttccctc---------------------cgaaaa +aaatgaacgctagcggataccgggaaaaatta---------------------------------------- +------------------------------------------ttgccgcgcc-------------------- +---------------------------tgcatgtgtgtga-------------------------------- +----------- +>MW355307.1/17242/1-7242 |Hepeviridae isolate HESQL122, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcatcactactgccattgag---caagctgctctggc +tgcggccaattctgccttggcgaatgctgtggtggttcggccgtttctatctcgtttacagactgagatcct +tattaatctgatgcaaccccgacagttggtttttcgacctgaggtgctctggaaccatcctatccaacgtgt +tatacataatgaattggagcagta---ctgccgggccc-gggccggtcgctgtctggaaattggagcccacc +caaggtcaatcaatgataaccctaatgttctgcatcggtgctttttacggcccgtcgggagggacgtccagc +gctggtattccgcccccacccgtggccccgcggccaactgccgccggtctgcgttgcgtggtctcccccctg +tcgaccgcacctactgttttgatggattttcccgctgtgctttcgctgcagagaccggtgtggccctctatt +ctctgcatgatctttggccggctgatgtcgcggaagctatggcccgacacgggatgacacgtctgtatgccg 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+ccccg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcttgctcagccgtctagc +cctgtcaagcctaga-------------------------------------ggtcccgtgcgtaagccgcc +gacaccgcc--------------------------------------accgcctcgcacccgccgcc----- +-------------------tcctttatacttacccagacggcgccaaggtgtatgcggggtcactgtttgag +tctagctgcgactggctggttaacgcatcaaatcccggccaccgtcctgggggtgggctgtgccatgcattc +tatcaacgctatcccgagtcgt------tccatccgactgagtttgttatgcgtgacgg---tctcgccgcg +tacactttgaccccccgccctattatccatgcggtggcccctgactatagggtcgagcagaatccaaagagg +cttgaggcggcataccgggagacctgttcccgccgcggcaccgctgcctacccactcctaggctcgggtatt +tatcaggtccctgtcagcctaagttttgatgcttgggagcgtaatcatcgccctggggacgagctttatttg +actgaccccgccgctact-------------------------------------------------tggtt +tgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------gccggcccttactataaccgaggatgcagc +tc------------gcacggccaacttggcactggagatcg------------atgccgccactgaagttgg +ccgtgcttgt---gttggctgtacagttagccccggggttgtacattaccaatttaccgccggcgtccctgg +ctcgggaaagtctaggtccatacagcagggggatgttgatgtggttgttgttcccacccgagagcttcgcaa +tagctggcgccgccggggttttgcggcctttacaccccatacggcggcccgtgttactctgggccgccgcgt +tgttattgatgaggccccgtccctcccaccacatttgttattgcttcatatgcagcgggcctcgtcggtcca +tcttcttggtgacccgaaccagattcccgctatagattttgagcacgccggcctggtccccgcaatacgccc +tgagcttgcacccaccagctggtggcatgttacacatcgttgccccgctgatgtgtgtgagctcatccgcgg +ggcctatccgaagatccagactacaagtcgtgtgctgcggtctctattttggaatgaa------cccgccac +tgggcaaaagttagttttcacacaggccgccaaggctgctaaccctggtgcgatcacagtccacgaggccca +gggagccacatttacagagaccacgatcatagctacggctgacgccaggggccttattcagtcgtctcgggc 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+cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgccgatgtcatttcacaacccggggctggagctcgccctc +gacagccgccccg---------------ccccctcggctccacttggcgtgaccagtccca----------- +------gcgcccctccgctgctccccgtcgtcgatctgcccca---------gctggggctgcgccgttgac +tgctgtatcaccggcccccgacacagcccctgtgcctgacgtcgattctcgcggcgctatattgcgacgaca +gtataatctatctacatctccgctcacgtcatccgttgcttcaggcactaatctggttctttatgctgcccc +gctgaacccccttctaccccttcaggacggcaccaatacacatatcatggctaccgaggcatctaactatgc +ccagtaccgggttgtccgggccacgatccgttatcgcccgttggtacctaatgccgtcggcggctatgcaat +ttctatttcgttctggccccaaaccactactactcccacatctgtggatatgaactctataacctctaccga +tgtcaggattctggttcagcctggtattgcttccgagcttgtcattcctagcgagcgcctccattatcgtaa +ccagggctggcgctctgttgaaacatcgggcgtggctgaggaggaggctacctctggcctggttatgctttg +cattcatggctcccctgttaattcctacactaacaccccttacactggggcgcttgggctccttgactttgc +attagaactcgagtttaggaatttgacacccgggaataccaacacccgtgtatcccggtacacaagtacagc 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+cggggttagccccgggctggtgcataaccttattggcatgctacaaactattgctgatgggaaggcccactt +tactgagactatcaaacctgtgctggatcttacaaattctattatacagaggttggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcttaccacaatccggggctggagctcgtcctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtttcgccggcgcctgatacggccccagttcctgatgttgactctcgtggtgctatcttgcgccgtca +gtacaatttgtccacctctccattaacttcatctgttgcctctgggactaatcttgtcttgtatgccgcccc +gcttaaccctcttctgcctctccaagacggtaccaatactcacatcatggcgactgaggcgtctaactacgc +tcagtatcgggttgtccgggcgactatccgttatcgccccttggtgccgaatgccgttggtggttatgcaat +ttcaatttccttctggcctcagactacaactacacccacctctgttgacatgaattctattacttctactga +tgttaggatcttagttcaacctggcatagcctctgagcttgtcatcccgagtgagcgccttcactaccgtaa +tcaaggctggcgttctgttgagacatcgggtgtggctgaagaggaagcgacatcaggcctcgtcatgctttg +tattcatggctcccctgttaattcttataccaacacaccctacactggggcgttagggctccttgattttgc +actcgagcttgaatttagaaatttgacccccgggaacactaacacccgtgtgtcccgatacactagtacagc +ccggcaccgtttgcgccgtggtgccgatggaacagccgagcttacaactaccgcagccacacgttttatgaa +ggacctgcatttta---ctgggacaaat---ggtgttggtgaggtaggccgcggtatagccctaacgctatt +taatcttgctgatacacttctcggcgggttgccgacagaattgatttcgtcggctggaggtcagctattcta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggtattgctataccgcatgatatagacttaggggattcccgcgtggttatacaagactatgacaa +ccaacatgagcaggaccggcctaccccgtcgccggccccgtctcgccccttttcggtccttcgggctaatga +tgttctgtggctctc-----------------------------tctgactgcggctgaatatgac------ +cagaccacatatggctcgtctaccaaccctatgtatgtttcagacacagttacatttgt---caatgtggca +acgggtgcccaggccgttgcccgatcccttgattggtccaaggttactttggatggtcggccacttactacc +at-----tcagcagtactctaaaacattttatgtac-tgccgcttcgtggcaagctttccttttgggaagct +ggcacgaccaag--gctggctacccttacaattataacactactgctagtgaccagattctgatcgagaatg +cagccggtcac------cgtgttgccat-atctacttataccactagtcttgg--------------ttccg +cccctgtgtctgtttc-tgcggtcggcgttcttgccccgcattctgctttagctgtgcttgaaratactatt +gact---------atcctgctcgtg----ctcatacttttgatgatttctgccctgagtgccgcaatc---t +tggcttgcagggctgtgctttccagtc--------tactgttgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattaa-tt-----c-ccct--tt------gt +gccc-cct--------tc------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355311.1/17227/1-7227 |Hepeviridae isolate HESQL134, complete genome +------------------------------------------g-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggtccggccgtttttatcccgtgttcaaactgagatcct +tattaatttgatgcaaccccggcagcttgtgtttcgacccgaagtcctctggaaccatccgatccagcgagt +catacataatgagctggagcaata---ctgccgggccc-gtgctggtcgctgtcttgaggtaggcgctcacc +caagatccatcaatgacaaccctaatgttttgcaccggtgcttcctccgcccggttgggagagacgtccagc +gctggtactccgctcccactcgtggtccagcggccaactgccgtcgttctgcgctgcgtggcctgcctcctg +tcgaccgcacatactgcttcgacgggttctcccgctgcacctttgccgctgagactggggtcgctttatact +cactgcatgatctttggccctcggacgttgcggaagctatggcccgccatgggatgacgcgcttgtatgctg +ccctccaccta-ccccctgaggtcctgctaccacccggcacttatcacacaacctcttatcttttgatccac +gacggcaatcgtgccgtcgtgacctacgagggggacaccagtgcaggctataaccacgatgtgtctatactt +cgtgcatggattcgcaccacgaaaatagttggtgatcacccactggtaatagagagggtccgcgccatcggc +tgccattttgtcttacttcttactgcagcccccgagccgtccccaatgccttatgtcccgtaccctcgctca +acagaggtgtatgttagatccatatttggccctggt---------gggtcgccttctctcttcccatcagcc +t----------gctctaccaaatcca-catttcatgctgttccagtccatatttgggaccggcttatgcttt +ttggtgctaccttagatgatcaggccttttgctgctcgcggcttatgacttacctccgtggaattagctaca +aagtgaccgttggcgcacttgtcgccaacgagggctggaacgcctcggaggatgcgcttactgctgtgatca +ctgcagcgtatctgaccatttgtcatcagcgctatctgcgaacacaggccatctctaaaggtatgcgccggt +tagaggttgagcacgcccaaaagttcatcacaaggctatacagctggctgtttgaaaagtc---------ag +gccgtgattacatccccggccgccagctccagttttatgcacagtgccgccgatggctttcggctggcttcc +atctggaccctagagttcttgtttttgacgaggcggtcccctgc---cgctgccggagcttcttaaagaa-- +----ggttgccggaaaattttgttgttttatgaagtggttggggcagga------gtgcacctgttttctgg +----------------agccagcagaaggcctggttggtgactgtggc--------catgataacgaggcct +atgaagggtctgaagtggaccccgccgaacctgcccaccttgatgtctctgggacctatgcggtccacggcc +gtcagcttgaggctctgtatagagcacttaatatcccagatgacattgcggctcgtgcttcacgcctgacgg +ctactgtggagcttgccgccagcccaggccgactcgagtgccgtacggtgcttgggaataagacctttcgta +catcaataactgatggtgcccaccttgaagccaacggccc------------------------tgagcaat +atgttttgacatttgatgattctcgtcaggtaatgggggccgggcctcacagccttacgtatgaactagttc +ctgccggtctgcaggttaaaatatcttct-------aatggcttggattgtaccgctacatttcct---cct +ggtggggcgccaagcgctgcacctggtgaagttgcggctttttgcagtgccctatacaggtacaataggttc +acccagcgccattcgctgaccggtgggttgtggctgcaccctgaaggcctccttggccttttcccccctttc +tccccggggcatctttgggagtctgcaaatcccttttgcggcgagagtacactttacacacggacatggtcc +acatctggtttctctagtgatttctccccacccgaggtggctcatgtcgccccagtccctgacgc----agg +gctgccttcgggtgccccttcgtctgctggtgatgc-----------------ctgggtgat---------- +---------cccaccgtcc----tctgaggggt--------------cggtggtcgtcccgccacccgaaac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtaagccagccaacctgcctagt +cccaccatacctaag-------------------------------------ccccccgcccgtaagccacc +taccccacc--------------------------------------accggcccgcacccgccggc----- +-------------------ttctttatacatatcctgacggggccaaggtgtatgctggctctttgtttgag +tcagattgtgattggctggttaatgcatccaatcccggccaccgccccggcggtggtctctgccatgcattt +tgccagcgctttccggaatcgt------tccatccaactgatttcgttatgcgtgaggg---tctcgccgcc +tacaccttgagcccgcgtccgattattcatgctgtggcccccgactatagggttgagcagaaccccaagaga +ctagaggcggcatatcgtgagacctgttctcgcctcggcacagccgcctacccactactggggtcggggatt +taccaggtacctgtgggcttaagcttcgacgcctgggagcgtaatcaccgcccaggcgatgagctttacctt +actgaaccagctgccgcc-------------------------------------------------tggtt +cgaggctaataaaccaaccca--------------------------------------------------- +------------------------------------------gccgaccctaacaattactgaggacactgc +cc------------gtacagccaaccttgcgcttgagattg------------actccgctactgaggtggg +ccgtgcttgc---gccggctgtactgttaatcccgggatcgttcattaccagtttactgccggggttcctgg +ctccgggaagtctaggtccatacagcaaggggatgttgatgtcgtggtcgtgccaactcgtgagctccgtaa +cagttggcggcgccgcggctttgctgctttcacaccccacacagcggctcgtgtcaccgccggccggcgcgt +ggtgatagatgaggcaccctcgcttccaccgcacttgctgttgcttcatatgcagcgagcctcatcggtcca +ccttctcggcgaccccaaccagatccctgctattgactttgagcacgccggtttagtcccagcgattcgccc +tgagcttgcccctactagttggtggcatgttacccatcgctgccccgctgatgtgtgtgagctcatacgcgg +ggcctacccaaagattcagacgactagccgtgtgttgcggtctttattttggaatgag------ccagcggt +gggtcagaggttagttttcacgcaggcggccaaggcggccaaccctggcgcaattaccgttcatgaggccca +gggtgccacgtttacggagactaccatcatagccacggctgatgctagaggtcttattcagtcttctcgtgc +acatgccattgttgcacttacccgtcacacagaaaagtgcgtcatttttgacgctcctggcctactgcgtga +ggttggcatttctgatataattgttaataacttt------------------------------ttcctggc +tggtg--gtgaagtgggccaccatcgcccttctaccataccccgcggcaatccagaccagaactttgacac- +-----cttacgggcgttccccccttcctgccaaattagtgcctaccaccagctggctgaggagctgggccac +cggccggccccagtggccgccgttctgcccccttgccctgagctcgagcagggtctactctacatgccgcag +gagctcacggtgtccgatagtgtcctaatttttgaactcacggacatagttcattgccgtatggctgccccc +agccaacgtaaggcggtcctttcaacgctcgtcggtaggtacggccgtcggacgaaactgtatgaagcggct +cattctgatgttcgtgagtctttagagaggttcatccccactatcgggccggtccaggccaccacgtgcgag +ctatatgaactggttgaggctatggtggagaagggccaggacggctccgctgtgctcgagcttgacctctgt +agccgcgatgtctcgcgtattacattctttcagaaggattgtaataagtttacaacaggtgagaccattgcc +catggtaaggtgggccagggcatttcggcatggagtaagaccttctgtgccctattcggcccgtggttccgt +gctattgagaaggagattctggctttgctcccacccaatatcttctacggcgatgcctatgaggagtcagtg +ttttctgcagccatctctggggctggctccagcatg---gtttttgagaatgatttctctgagtttgacagt +acccaaaacaacttctctct------------------tggccttgagtgtgttattatggaggagtgtggt +atgccccagtggcttatccggctgtatcatttaattaggtcggcctggactttgcaagccccgaaagagtct +ttgaaaggtttttggaagaagcattctggtgagcctggtactctcctctggaacaccgtttggaacatggcg +atcatagcacactgctatgaatttcgtgatctgagagtggcggcgtttaagggggatgattcagttgtcctt +tgcagtgattaccgccagagccgtaatgcagccgccttgatagccggttgcgggttaaaattgaaggttgat +taccggcctataggtttgtatgccggcgttgtggtggccccgggcctcggggcacttcctgatgttgtccgg +tttgccggtcgattatctgagaagaactggggcccgggccctgagcgcgccgaacaactgcgcctggcggtt +tgtgatttccttcgagggttaacgaatgttgcgcaggtttgtgttgatgttgtatcccgtg-------tcta +tggtgttagccccgggttggtgcataaccttattggtatgctgcagactattgctgatggaaaggcccattt +tactgagactgtcaagcctgtgctggatcttacaaattctatcatacagaggttggaatgaataacatgtt- +c----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gctgttgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcaacggcggtgc +cggcagtg-gtttctggggtgacagg--attgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcatatcacaacccgggactggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgttaac +tgctgtttcaccggcgcctgatacggccccagttcctgatgttgactcccgtggcgctattttgcgccgcca +gtataatctgtccacctcccctttaacctcatctgttgcctctggaactaatcttgtcttgtacgccgcccc +gcttaatccccttttgcccctccaagacggcaccaatactcacatcatggcgactgaggcgtctaattatgc +tcagtatcgggtcgttcgggccacaatccgctaccgccctttggtgccgaatgccgtcggtggttatgcgat +ttctatctctttttggcctcagactacaactacacctacctctgttgatatgaattctattacttccactga +tgttaggatattagtccaacctggcatagcctctgagctggtcataccgagtgagcgccttcactatcgtaa +tcaaggttggcgctctgttgagacatcgggtgtggccgaggaggaggcaacatcgggcttagtcatgctttg +tattcatggttcccctgttaattcctacaccaatacgccctatactggggcattggggctccttgactttgc +gctcgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgttacactagcacagc +ccgacaccgtttgcgccgcggtgccgatggaacagccgagcttacaaccactgcagccacacgttttatgaa +ggacttgcatttta---ccgggacaaat---ggtgttggtgaggtaggccgtggtatagctctaacgctatt +taatcttgctgatacacttctcggcggactgccgacagaattgatttcgtcggctggtggtcaattgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggcattgctataccacatgatatagacttaggggactcccgtgtggttatacaagattatgacaa +ccaacatgaacaggaccggcccactccgtcgccggccccgtcccgccccttttcagtccttcgagccaatga +tgtcctgtggctctc-----------------------------cctaactgcggctgaatatgac------ +cagactacttatggttcgtcgaccaaccccatgtatgtctcagatactgtcacatttgt---caatgtggcg +acaggtgcccaggctgttgcccgttcccttgattggtctaaggtcactctggatggccggccactcactacc +at-----ccagcagtactctaagacattctatgtgc-tgccgctccgtggcaagctttccttttgggaagct +ggtacaactaag--gccggctacccttataattataacaccactgctagtgaccagattttgattgagaatg +cagccggccac------cgtgtcgctat-atctacttacactactagtctggg--------------tgccg +gccctgtgtccgtttc-tgcggtcggcgttcttgctccgcattytgctttagccgtgctcgaggatactatt +gact---------accctgcccgtg----ctcatactttcgatgatttctgtcctgagtgccgtaatc---t +aggcctgcagggttgtgcttttcagtc--------tactgttgctgagctccagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-cct--ttt------gt +gccc-cct--------tc-taaa-ct-tt----gt-tc-tgt----------------tatt-t-------c +ttttttctg--ggtcc--------------gccccccccccccgg---------------------gaaaaa +aa---------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355312.1/17167/1-7167 |Hepeviridae isolate HESQL004, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccatcagttcatcaaggctcctggcattactactgccattgag---caagctgctctggc +cgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tatcaatttgatgcaaccccggcagttggttttccgacctgaggtgctctggaatcatcctatccagcgggt +tattcataatgagttagagcagta---ctgccgggccc-gggctggtcgctgtttagaggttggggcccatc +cgagatccatcaatgacaacccgaatgttttgcatcgctgcttcctacgaccagtcggcagagatgttcagc +gctggtattctgcccctactcgtggccctgcggccaactgccgccgctccgctctgcgtggccttccacccg +ttgaccgcacctattgttttgatggattctctcgttgcccgtttgctgcggagactggtgttgccctctatt +cattgcatgacctctggccggccgatgttgcagaggccatggcccgacatgggatgacacgcctatacgctg +cactacacctc-ccccctgaagtattactaccacctggtacttaccacacaacttcataccttcttattcac +gacggcgatcgtgccgttgtgacttatgagggtgatactagtgcaggttacaaccatgatgtttccatactc +cgcgcatggatccgcacaactaagatagttggcgaccatccgttggtgatagagcgtgtgcgggctattggc +tgccactttgttctgttgctcactgcggcccctgagccgtcaccaatgccttatgtcccatacccccggtcg +acagaggtgtacgtccgttccatattcggccctggc---------gggtccccgtccttgtttccatcagct +t----------gctctacaaaatcca-catttcatgccgtcccagttcatatttgggaccggctcatgctct +ttggtgccaccctggacgatcaggcgttctgctgctcacggcttatgacttaccttcgtgggattagttata +aggttactgtaggtgcccttgttgccaatgaagggtggaatgcttcggaggacgctcttactgctgttatca +ccgcagcgtacttgactatttgtcatcagcgttacctccgtacccaagccatatccaagggcatgcgccggc +tggaggttgagcatgctcaaaaatttatcacaagactctatagttggctgtttgagaagtc---------cg +gccgtgactacatccccggccgtcagcttcagttctatgcacagtgccgccgctggttatcggcgggtttcc +acctcgacccaagggtgcttgtctttgatgagtctgccccctgc---cgttgtaggacgtttcttaagaa-- +----ggttgcaggtaagttctgctgttttatgaagtggctggggcagga------gtgcacctgcttcctgg +----------------aaccagctgagggtctggttggtgaccatggc--------cacgataatgaagcct +atgagggttctgaggtcgaccaggccgagcccgcccatcttgatgtttctgggacttatgccgtccatggga +gccaactcgaggctctgtacagggcgcttaacatcccgcacgatattgctgctcgagcctcccgtttaactg +ccactgttgaacttactgcaggcccagaccgcttggagtgtcgcactgtgcttgggaataaaaccttccgga +caacggtggttgatggcgctcatcttgaggcgaatggccc------------------------cgagcagt +atgtcctttcgttcgacgcctcctgccagtctatgggggctgggccgcataacctcacctatgagctcactc +ctgctggtttgcaggttaagatttcatct-------aacggcctggattgcactgcaacattcccc---ccg +ggcggagccccaagcgcagctccgggggaggtagcagctttttgcagcgccctctataggtacaacaggttc +acccagcgccattcgcttacaggcggcttgtggctgcatcctgaggggctattgggcatcttcccccccttt +tcccccgggcatctttgggagtccgctaatcctttttgtggggagggaactttgtacacccggacttggtca +acatctggtttttctagtgatttttccccccctgaggcggctgccgctgtgccggccgctgccac----agg +gttgctcc---attctacaacccctgttagtgacat-----------------ttgggtgtt---------- +---------gccgccgcct----tctgaggagt--------------ctcaggttgatgcagcgcctgctcc +tacag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcccgttcgaccgcccggc +cctgctaggccgaag-------------------------------------gcccccgtgtgtaagccacc +aacaccacc--------------------------------------acccccgcgtacccgccgcc----- +-------------------tcctctacacttacccggatggggcgaaggtgtatgcagggtcactgtttgag +tcagactgtgattggctggttaatgcgtcgaatcccggccatcgtcccggaggtggcctttgccatgctttt +taccaacgctaccccgagtcgt------tccacccaactgagttcattatgcgtgacgg---tcttgccgca +tatactctgactcctcggcctattatccatgcggtggctcccgattatagggttgagcagaacccgaagagg +cttgaggcagcataccgagagacctgctcccgccgtggcaccgccgcttacccactcctcggctcaggtata +taccgagtccctgttagcctcagctttgatgcttgggagcgtaaccaccgccccggggatgagctttacttg +accgacctcgccgctacc-------------------------------------------------tggtt +cgaggccaacaagccagcaca--------------------------------------------------- +------------------------------------------accggcccttacaataactgaagatacagc +cc------------gtacagccaacctagcactagagatcg------------acgctgctacggaggttgg +ccgggcttgt---gccggttgtacagttagccctggggttgtgcactatcaatttaccgccggggtcccagg +ttcagggaagtcgcggtctatacagcaaggagatgttgatgtggtggttgtccccactcgggagcttcggaa +tagttggcgccgccggggttttgcagctttcacacctcacacggcggcccgcgttaccacgggccgtcgtgt +cgttattgatgaggccccgtcccttccgccgcacctactgctcttacacatgcagcgggcctcgtcggttca +cctcctaggcgacccaaatcagatccccgctatagactttgagcatgccggtttggtccccgcaatacgccc +cgagcttgcacccaccagctggtggcatgtcactcaccgctgccctgctgatgtgtgcgagcttatacgcgg +ggcctatcccaaaatccagactactagccgcgtgctgcggtctttattctggaatgag------cccgccat +tggccagaagttagtctttacacaggccgctaaggctgccaaccccggtgcgattacagtccatgaggccca +gggcgccaccttcacggagactacaattatagccacggccgatgctagggggctcatccaatcttcccgagc +tcacgccatagtcgcacttactcgccacacagagaagtgcgttatccttgatgcccccggtttgttacgtga +ggtcggtatatctgatataattgtcaacaatttc------------------------------ttcctcgc +cggcg--gggaagtgggccaccaccgcccctctgtgataccccgcggcagtcctgaccaaaacctcgcgac- +-----actacaggcttttccaccctcctgtcagatcagtgcttatcatcagttagctgaggagctgggccat +cgcccggcccccgtcgctgccgtcctgcccccctgccccgaactcgagcagggcctgctgtatatgccacaa +gagctcacggtgtctgatagcgtgttggtctttgaactcacggacatagttcactgccggatggctgctcct +agccagcggaaggccgtcctatcgacgcttgtaggtaggtatggccgccggacgaagctgtatgaggcggct +cactccgatgtccgtgagtccctgacaagattcatccccaccatcgggcccgttcaggcaactacgtgtgag +ctatacgaactagttgaggccatggtgaataagggtcaggacggctctgccgtacttgagcttgatctttgc +aatcgtgatgtatcgcgtattacattcttccagaaagactgtaacaagttcaccacaggggagaccattgcc +cacggtaaggtcggccagggcatctcggcttggagcaagaccttctgtgccctttttggcccgtggttccgt +gctattgaaaaagaaatactggccctgctcccgcccaatatcttctacggtgatgcatatgaagagtctgtg +tttgcttccgccgtgtctggggcaggttcatgcatg---gtattcgagaatgatttttcagagtttgatagc +actcaaaataatttctccct------------------tggccttgagtgtgtagtcatggaggaatgtggc +atgccccagtggctaattcggttgtaccacttggttcggtcagcctggattctacaggcgccgaaggagtct +cttaaagggttttggaagaagcattccggtgagcccggcaccctcctttggaacaccgtttggaatatggcg +atcatagcacattgctatgagtttcgtgatcttagggttgccgccttcaagggagacgattcggtggtcctc +tgtagtgactaccgacaaagccgtaacgcagcggccctgattgcaggttgcgggctcaaactgaaggtcgat +taccgccctatcgggttgtatgctggtgtggtggtggcccccggcctggggacgctacccgatgtggtgcgc +tttgctggccggctgtctgagaagaattggggccctgggccggagcgggccgagcagctgcgtcttgctgtt +tgtgattttcttcgagggctgacgaatgttgcgcaggtgtgtgttgatgttgtatctcgag-------ttta +tggggttagccctgggctggtacataacctcattggcatgttgcaaaccattgctgatggtaaggcccactt +tacagagactgttaaacccgtgcttgacctcacgaactctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcctcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagtcgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgatgtcatttcgcaacccggggctggaactcgccctc +gacagccatcccg---------------cccccttggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccacgtcgtcgacctgcccca---------accggggctgcgccgttgac +tgctatatcacctgctcctgatgcggctcccgtgcctgatgttgattctcgcggcgctatattgcggcgcca +gtataacttatctacatccccactcacatcatctgttgcttcgggtaccaatttggttctttatgctgcccc +gctaaatcccttgttacctcttcaggatggcactaacacccacatcatggctactgaggcgtctaactatgc +ccagtaccgggttgtccgagctacgatccgttacaggccgttggtgccgaatgctgtcggtggctatgcaat +ctccatctcattttggcctcagaccaccaccacccctacgtctgttgacatgaattctattacctccactga +tgttaggatcttagttcagcccggtattgcttccgagctagttattcctagtgaacgcctccactaccgtaa +ccaaggctggcgctctgtggagacctcgggtgtggccgaggaggaggccacttctggtttggtgatgctatg +catccatggttcccccgttaactcctacaccaatactccctacaccggggcgcttgggcttcttgactttgc +tctagagcttgagtttaggaacttgacacccggaaacaccaacacccgcgtttcccggtacacaagcactgc +ccgtcatcggctgcgtcgcggcgccgatggcactgctgagcttaccaccacagcggctacacgttttatgaa +ggacctgcacttca---ccggtacgaat---ggggtcggtgaggtgggccgtggcattgctcttacactctt +taatcttgctgacacgctcctcggtggcttgccgacagaattaatttcgtcggctgggggacagttgttcta +ttcccgccccgtcgtctcagccaatggcgagccggctgttaagttatatacatctgtggagaacgcgcagca +agataaggggattgctattccacatgacatagacttaggtgactctcgtgtggttattcaagattatgataa +tcagcacgagcaggatcggcccaccccttcgcccgccccatcccgccctttttcggttcttcgtgctaacga +tgttctatggctttc-----------------------------tcttaccgccgccgagtatgac------ +cagactacatatgggtcgtccaccaacccaatgtatgtctcagatactgtcacatttgt---caacgtggct +acaggggcccaggctgttgcccgctctcttgattggtctaaagttactctagatggccgcccccttactacc +at-----tcagcagtattccaaaacattttatgttc-tcccgcttcgcgggaagctatccttttgggaggct +gggacaactaaa--gctggttatccttataattataacacgactgctagtgaccagattctaattgaaaatg +cagctggtcac------cgtgttgccat-ctccacttatactaccagccttgg--------------cgccg +gccctgtgtcagtttc-tgcagtcggtgtgttagctccacattcggctcttgcagttcttgaggataccact +gact---------accctgctcgtg----cccacactttcgatgatttctgcccggagtgtcgcgccc---t +tggtctgcaggggtgtgccttccagtc--------tactattgctgaacttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattaa-tt----t--ccyt--tt------gt +gccc-cct--------tc------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355313.1/17145/1-7145 |Hepeviridae isolate HESQL146, complete genome +--------------------------------------------------------------ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaactctgccctggcgaatgctgtggtggttcggccgtttttgtctcgtgtgcaaaccgagattct +tattaatttgatgcaaccccggcagttggttttccgacccgaagtgctctggaatcatcctatccaacgggt +tatccataatgaacttgaacagta---ctgtcgggccc-gggctggtcgctgtctagaggttggagcccacc +caagatccattaatgataacccaaatgttctacaccggtgctttctacgaccggttgggagagatgttcagc +gctggtactctgctcctacccgtggccctgcggctaactgccgccgttctgccttgcgtggccttccccccg +ttgatcgtacctattgttttgatggattctctcgctgctcatttgctgcagaaactggggttgctctttact +ctctgcatgacctctggccggccgatgttgcggaggctatggcccggcacgggatgacacgcttgtatgctg +cactacatctc-cctcctgaagtactattaccacccggtacttaccatacaacttcataccttctgattcac +gacggtgatcgtgctgttgtgacctatgaaggtgatactagtgcaggctacaaccatgatgtctccatactt +cgtgcatggatccgcacaactaagatagtcggtgatcatccgctggttatagagcgtgtgcgggctattggc +tgccacttcgtgctgctgctcactgcggcccctgagccgtcaccaatgccttatgtcccatacccccggtcg +acagaggtgtatgtccgctctatattcggccctggt---------gggtccccatctttatttccatctgct +t----------gctctacgaaatcca-catttcatgctgtcccggttcatatttgggaccggctcatgcttt +tcggcgctactctggatgatcaggcgttctgctgttcacggctcatgacctaccttcgcgggattagttaca +aggtcactgtcggcgcccttgtcgctaacgaggggtggaatgcttcggaggacgctcttaccgctgttatta +ctgcagcgtatttgaccatttgtcatcagcgttacctccgcactcaagctatatccaagggtatgcgccgtc +tggaggttgagcatgcccaaaaattcattacaagactttatagttggctgttcgagaagtc---------cg +gccgtgactatatccccggccgccagctccagttctatgcacagtgccgccgttggttatcggcgggtttcc +atcttgacccaagggtgcttgtttttgacgagtctgtgccctgc---cgctgtaggacatttcttaagaa-- +----ggctgtgggtaagttctgctgttttatgaagtggttagggcagga------gtgcacctgctttttgg +----------------aaccagcagagggtctagttggcgaccatggc--------cacgataatgaagcct +atgagggctccgaggtcgatcaggctgagcccgcccaccttgatgtttctgggacttatgccgtccatggcc +gccaactcgaggccctgtatagggcgcttaacatcccgcatgatatcgctgcccgagcctcccgtttgactg +ccaccgtcgaactcgttgcaggtccagaccgcttggagtgccgcactgtgctcgggaacaagactttccgga +cgacagtggttgatggcgcccatcttgaggcgaacggccc------------------------tgagcagt +acgttctttcgtttgacgcctctcgccaatctatgggcgccgggccgcatagtctctcctacgagctcactc +ctgctggtctgcaggtcaagatttcatct-------aatggcctggattgcactgcaacattccct---ccg +ggcggggcccctagcgctgctccgggggaggtagcagccttctgcagtgccctttacaggtataacaggttc +acgcagcgccattcgcttataggtggcttgtggctgcatcctgaggggctgttgggtatcttcccccctttc +tctcccgggcacctttgggagtccgctaaccctttttgtggggagggaaccttgtacacccggacatggtca +acatctggtttttctagtgatttttccccccctgaggcagccgtcgcagcgccggctgctacacc----ggg +gttatgcc---accctacacctcctgttagtgacat-----------------ctgggtgtt---------- +---------accgccgccc----tctgaagaat--------------ttcaggttgacacagcgcccgctcc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcccgctcaaccatctagc +cccgccgggccaaag-------------------------------------gctcccgtgcgtaagccgcc +aacgccacc--------------------------------------gcccccgcgcacccgccgcc----- +-------------------ttctctatacctatccggatggggcaaaggtgtatgcagggtcactgtttgag +tctgactgtgattggctggttaatgcgtcgaatcccggccatcttcctggtggcggcctttgccatgccttc +taccaacgctaccccgagtctt------tccacccaaccgagttcattatgcgcgacgg---tcttgccgcg +tatactttaactccccggcctattattcacgcagtggcccctgactatagggttgagcacaatccaaagagg +cttgaggcagcatatcgagagacttgctctcgccgcggtaccgccgcctacccactcctcggctcgggtata +tatcaagtccccgtcggcctcagctttgacgcttgggagcgtaaccaccgccccggggatgagctctaccta +accgacctcgcagctacc-------------------------------------------------tggtt +tgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------gccggccctcacaataaccgaggatgcagc +cc------------gcacagccaacctagcactggagatcg------------atgctgctacagaggtcgg +ccgggcttgt---gccggttgtgtagttagtcctggggttgtgcactatcagtttactgctggggtcccagg +ttcggggaagtcgcgttctatacagcagggggatgttgatgtagtggttgtccccacgcgggagctccggaa +tagttggcgtcgtcggggtttcgcagcttttacacctcacacggcggcccgtgtcaccacgggccgtcgtgt +tgtgattgatgaggccccatctctcccaccgcatttgttgcttctacatatgcagcgggcctcgtcggtcca +cctactcggcgacccgaaccagatccctgccatagacttcgagcatgctggcctggtccccgcaatacgccc +cgagcttgcgcccaccagttggtggcatgttacccatcgctgccccgctgatgtgtgcgagcttatacgcgg +ggcttatcccaaaatccaaaccactagccgcgtactgcggtctttattctggaatgag------cctgccat +tggccagaagttagtttttacccaggctgcaaaggccgccaatcccggtgcgattacagtccacgaggccca +gggcgccactttcacggaaactacaatcatagccacggctgatgctagggggctcatccaatcttcccgagc +tcatgccatagtcgcacttacccgccacacagagaagtgcgttattcttgacgcccccggcttgctacgtga +ggttggtatatcggatgtgattgtcaacaatttt------------------------------ttcctcgc +cggcg--gggaagtgggtcatcaccgcccctctgtgatacctcgtggcaatcctgaccagaacctcgcgac- +-----actacaggcctttccaccttcctgccagattagtgcctatcaccagttagctgaggaacttggccac +cgcccagcccccgtcgccgctgtcctgcccccttgccccgaacttgaacaaggcttgttatatatgccgcag +gagcttacggtgtctgatagcgtgcttgtctttgaactcacagacatagtccactgccggatggctgccccc +agtcagcggaaggctgtcctatcgacgctcgtgggtaggtacggccgtcggacgaagctgtttgaagcagct +cactctgacgtccgtgagtccctggctaggttcatccccaccattgggcccgttcaggccaccacgtgtgag +ttatatgagctggttgaggccatggtggagaaaggtcaggatggctccgccgtgcttgagctcgacctctgc +aatcgtgatgtgtcgcgaattacatttttccagaaagattgtaataaattcaccacaggggagaccattgcc +cacggtaaggtcggccagggcatctcggcttggagtaaaaccttctgtgccctgtttggtccgtggtttcgt +gctattgaaaaagaaatactagccctgctcccgcctaatattttctacggcgacgcatacgaggagtctgtg +tttgccgccgctgtgtcaggggcaggttcaagcatg---gtatttgaaaatgatttttcagagtttgatagc +acccaaaataacttctccct------------------tggtctcgagtgtgtaatcatggaggagtgtggc +atgccccagtggctaattcggttgtaccatttggttcggtcggcctggatcctacaggcgccgaaggagtct +cttaagggattttggaagaagcattctggtgagcccggcaccctcctctggaacactgtttggaatatggcg +atcatagcacactgctatgaatttcgtgactttagggttgccgctttcaagggggatgactccgtggtcctc +tgtagcgactaccgtcagagccgtaacgcagcggccctgattgcaggttgcgggctcaaattgaaggttgat +tatcgccctattgggttgtatgctggtgtggtggtggcccctggtttggggacgctacccgatgtggtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggctgagcaattgcgcctagctgtt +tgtgacttccttcgagggttaacgaatgttgcgcaggtatgtgtcgatgttgtatcccgag-------ttta +tggagttagccctgggttggtacataaccttattggcatgttgcaaaccatagctgatggcaaagcccattt +tacagagactgttaaacctgtgcttgacctcacgaactctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagtcgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtaccgcaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccacgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgccgtatcacctgctcccgatacagctcctgtacctgatgttgactcgcgcggcgctatactgcgacgcca +gtataatttatccacatccccgctcacatcttctgttgcttcgggtactaatctggttctttatgctgctcc +gctaaaccctttgctgccccttcaggatggcactaacactcacatcatggccactgaggcatctaattatgc +ccagtatcgggttgtccgagctacgatccgttacaggccattggtgccaaatgctgtcggtggttatgcaat +atccatctcattctggcctcaaactactactacccccacgtctgttgatatgaattctatcacttccactga +tgttaggattttagttcagcctggcattgcctctgagttggttatccctagtgagcgcctccattatcgtaa +ccagggctggcgctctgtggagacctcaggtgtggctgaagaagaggctacttctggtttggtaatgctttg +tattcatggctctcctgttaattcttataccaataccccctataccggggcgctcggactccttgatttcgc +tttggagcctgagtttaggaacttgacacccgggaacaccaacacccgtgtgtcccggtatacaagcacagc +ccgtcatcggttgcgccgcggcgctgatggcaccgctgaactcaccaccacagcagctacgcgctttatgaa +ggatctgcacttca---ccggtacgaat---ggggtcggtgaggtgggtcgcggtattgctctcacactctt +taatcttgctgatacgcttctcggtggtctgccgacagaattaatttcgtcggctgggggacagttattcta +ctcccgccccgtcgtctcagccaatggcgagccgactgtcaagttatacacatctgtagagaatgcgcagca +ggataaagggatcgctatcccacatgacatagatctgggtgactcccgtgtagtcatccaagactatgacaa +ccagcatgagcaggatcggcccaccccctcgcctgccccttctcgccccttttcggttcttcgcgctaatga +tgttctatggctttc-----------------------------tcttactgccgccgagtacgac------ +cagactacatatgggtcgtccaccaacccgatgtacgtctcggatactgtcacatttgt---caacgtggcc +acaggagcccaggctgtcgcccgttccctcgactggtctaaagttactttggacggccgccctcttactacc +at-----ccagcagtattctaaaacattttatgttc-tcccgcttcgcgggaagctatctttttgggaggcc +gggacgaccaag--gccggctacccttataattacaacacaactgctagtgaccagattttgattgaaaatg +cggctggtcac------cgtgtcgccat-ttccacgtatactactagcttggg--------------cgctg +gccctgtgtctgtttt-tgcagttggtgttttagccccgcattcggctcttgcagtccttgaagacactatt +gact---------accctgctcgtg----cccacacttttgatgatttctgcccggagtgccgcgctc---t +tggtttgcaggggtgtgccttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattaa-tt----------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355314.1/17177/1-7177 |Hepeviridae isolate HESQL081, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +cgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttgtctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagctggttttccgacctgaggtgctctggaatcatcccatccaacgggt +tattcataatgaattagaacagta---ctgccgggccc-gggctggtcgctgtttagaggttggggcccacc +caagatccatcaatgacaacccgaatgttctgcatcgctgcttcctacgaccggttggtagagatgttcagc +gctggtactcagcccctacccgtggccctgcggctaactgtcgccgctccgccttgcgtggcctcccccccg +ctgatcgtacttactgctttgatggattctctcgctgctcttttgctgcggagactggtgtcgccctttact +cactgcatgacctctggccggccgatgttgcggaggccatggcccgacacgggatgacacgcttatatgctg +cactacatctc-ccccctgaagtgttactaccacctggcacttaccacacaacttcatatcttcttattcac +gacggtgatcgtgccgttgtgacctacgagggtgacactagtgcaggttacaaccatgatgtttccatactt +cgtgcatggatccgcacaaccaagatagtaggcgaccatccgctggtgatagagcgtgtgcgggctattggc +tgccactttgtgctgctgctcactgctgcccctgagccgtcaccgatgccttatgtcccatacccccggtcg +acagaggtgtacgttcgttccatattcggccccggc---------ggatccccgtccctgtttccatcagct +t----------gctctacaaaatcca-catttcatgccgtcccagtccatatctgggaccggctcatgctct +ttggtgctaccttggacgatcaggcgttctgctgctcacggcttatgacataccttcgtgggattagctaca +aggttactgtaggtgccctcgttgctaatgaagggtggaatgcttcggaggacgctcttaccgctgttatca +ctgcagcgtacttgaccatttgtcatcagcgttacctccgcactcaggctatatccaagggtatgcgccggc +tggaggttgaacatgctcaaaaatttatcacaagactctatagttggctgtttgagaagtc---------tg +gccgcgactacatccccggccgccagctccagttctatgcacagtgccgtcgctggttatcggcgggtttcc +acctcgatccaagggtgcttgtctttgatgagtctgcgccctgc---cgttgtaggacgtttctcaagaa-- +----ggttgcaggtaagttctgttgttttatgaagtggttggggcagga------gtgcacctgtttcctgg +----------------aaccagctgagggcctggttggtgaccatggt--------cacgataatgaagcct +atgagggttctgaggtcgaccaggccgagcccgcccatgttgatgtttctgggacttatgccgtccatggga +gccaactcgaggccctgtacagggcgcttaatatcccgcacgacattgccgctcgagcctcccgtttaaccg +ctactgttgaacttactgcaggtccagaccgtttggagtgtcgcactgtgctcgggaataagaccttccgga +caacggtggttgatggcgcctaccttgaggcgaatggccc------------------------cgagcagt +atgtcctttcgtttgacgcctcctgccagtctatgggggctgggccgcataacctcacctatgagctcaccc +ctgctggtttgcaggttaagatttcatct-------aatggcctggattgcactgcgacatttccc---ccg +ggcggagcccctagtgcagctccgggagaagtagcagctttctgcagtgccctctataggtacaataggttt +acccagcgccattcgcttacgggcggtttgtggctgcatcctgaggggctattgggcatcttcccccccttt +tctcccgggcatctttgggagtccgctaaccctttttgtggggagggaactttgtacacccggacttggtca +acatctggtttttctagtgatttttccccccctgaggcggctgccgctgcgccggccgctgccac----agg +gttacccc---accctacacctcctgttagtgacat-----------------ttgggtgtt---------- +---------accaccaccc----tctgaggagt--------------cccaggtagatgcagcgcctgcccc +tccag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcctgttcagccgctcggc +cctgctaggctgaag-------------------------------------gtttccgtgcgtaagccacc +gacaccacc--------------------------------------acctccgcatacccgccgcc----- +-------------------tcctctatacttatccggatggggcaaaggtgtatgcagggtcactgtttgag +tcagactgtgattggctggttaatgcgtcgaatcccggccatcgccccggaggtggcctttgccatgctttc +taccaacgctatcccgagtctt------tccacccaactgagtttattatgcgtgacgg---tcttgccgca +tataccttaactcctcggcctattatccacgcggtggctcccgattatagggttgagcagaatccaaagagg +cttgaggcagcataccgggagacctgctctcgccgtggcaccgccgcttatccactcctcggctcgggcata +taccgggttcccgttagcctcagctttgacgcttgggagcgtaaccaccgccccggggatgagctttacttg +actgacctcgccgctacc-------------------------------------------------tggtt +cgaggccaataagccagcaca--------------------------------------------------- +------------------------------------------accggccctcacaataactgaagatacagc +cc------------gcacagccaacctagcactagagatcg------------acgctgctacggaggttgg +ccgggcttgt---gccggctgtacagttagtcctgggattgtgcactatcaatttaccgccggggtcccagg +ttcagggaagtcgcgatctatacagcaaggggacgttgatgtagtggtcgtccccacccgggagcttcggaa +tagttggcgtcgccggggcttcgccgctttcacgcctcacacggcggcccgtgtcaccacgggccgtcgtgt +tgtgattgatgaggccccgtcccttccgccgcacctgctgctcttacatatgcagcgggcctcgtcggtcca +ccttctcggcgacccgaatcagatccctgctatagactttgagcatgccggcctggtccccgcaatacgtcc +tgagcttgcgcccaccagttggtggcatgttactcatcgctgccctgctgatgtgtgcgagcttatacgcgg +ggcctaccccaaaatccagactactagccgcgtgctgcggtctttattctggaatgag------cccgctat +tggccagaagttagtctttacacaggccgctaaggctgctaaccccggtgcgatcacagtccatgaggccca +gggagccacttttacagagactacaattatagccacggccgatgctagggggctcattcaatcctcccgggc +tcacgccatagtcgcacttacccgtcacacagagaagtgcgttatccttgatgcccccggtttgttacgtga +ggttggtatatctgacataattgtcaacaatttc------------------------------ttcctcgc +cggcg--gggaagtgggccaccaccgcccctctgtgataccccgcggcagtcctgaccagaacctcgcgac- +-----actacaggctttcccaccctcctgtcagatcagtgcttatcatcagttagccgaggagctgggtcat +cgcccggcccccgtcgctgccgtcctgcccccttgccctgagcttgagcagggcttgctgtatatgccacag +gagctcacggtgtctgatagcgtgttggtttttgaactcacggatatagttcattgccggatggctgcccct +agccagcggaaggctgtcctatcgacgcttgtgggtaggtatggccgccggacgaagctgtatgaggcagct +cattccgatgtccgtgagtctctgacaagatttatccctaccatcgggcccgttcaggcaactacgtgtgag +ttatacgaactggttgaggccatggtggacaagggtcaggacggctccgccgtacttgagcttgatctttgc +aatcgcgatgtatcgcgtattacattcttccagaaagattgtaacaagttcaccacaggggagactattgcc +cacggtaaggtcggccagggcatctcggcttggagcaagaccttctgtgccctcttcggcccgtggtttcgt +gccattgaaaaagaaatactggccctgctcccgcccaatatcttctacggcgatgcatatgaagagtctgtg +tttgctgccgctgtgtctggggcaggttcatgcatg---gtatttgagaatgacttttcagaatttgatagt +actcaaaataatttctccct------------------tggcctcgagtgtgtggttatggaggaatgcggc +atgccccagtggctaatccgattgtaccacttggtccggtcagcttggattttacaggcgccaaaggagtct +cttaaagggttttggaagaagcattctggtgagcccggcaccctactttggaacaccgtttggaatatggcg +atcatagcgcattgctatgagtttcgtgatcttagggttgccgccttcaagggggatgattcagtggtcctc +tgtagcgactaccgtcaaagccgcaatgcagcggctttgattgcaggttgcgggctcaaactgaaggttgat +tatcgccctatcgggttgtatgccggtgtggtggtggcccccggcttggggacgctacccgatgtggtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggccgagcagctgcgccttgctgtt +tgtgattttcttcgagggctgacgaatgttgcgcaggtatgtgttgatgttgtatcccgag-------ttta +cggagttagccctgggctggtacataaccttattggcatgttgcaaaccattgctgatggcaaggcccattt +tacagagactgttaaacctgtgcttgaccttacgaattctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgcgccctagggctgtttt +gttgctgttcctcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccaccgatgtcatttcgcaacccggggctggagctcgccctc +gacagccacctcg---------------ccccctcggctcctcctggcgtgaccagtccca----------- +------gcgcccctccgctgcctcacgtcgtcgacctgcccca---------gctggggctgcgccgctgac +tgctatatcacctgcccctgatacggcccccgtgcctgatgttgattctcgtggcgctatattgcggcgcca +gtataatttatctacatccccactcacatcatccgttgcttcgggtactaatctggttctttatgcagcccc +gctaaatcccttgttacctcttcaggatggcactaacactcacatcatggctactgaggcatccaattatgc +tcagtaccgggttgtccgagctacgatccgttacaggccgttggtgccaaacgctgtcggcggctatgcaat +ctccatctcattctggcctcagaccactaccacccctacgtctgttgatatgaattctatcacctccactga +tgttaggatcctggttcagcccggtattgcttctgagttagttattcctagtgaacgcctccactaccgtaa +tcaaggttggcgttctgtggagacctctggtgtggctgaggaggaggccacttctggtttggtgatgctttg +tatccatggttcccccgttaattcctacaccaataccccctataccggggcgcttgggctccttgactttgc +tctggaactcgagtttaggaatttgacacccgggaacactaacacccgtgtttcccggtatacaagcactgc +tcgtcatcggctgcgccgcggcgccgacggcaccgctgagcttaccaccacagcggctacacgtttcatgaa +ggacctgcacttta---ccggtacgaat---ggggttggtgaggtgggccgtggtattgctcttacactctt +taatcttgctgacacgctccttggcggtttgccgacagaattaatttcgtcggctgggggacagttgttcta +ctcccgccccgtcgtctcagccaatggcgagccggctgttaagttatatacatctgtggagaatgcgcagca +agataaagggattgctatcccgcacgacatagacttaggtgattctcgtgtggttattcaagattatgacaa +tcagcatgagcaggatcggcccaccccttcgcccgccccatcccgccctttttcggttcttcgtgctaatga +tgtcttatggctttc-----------------------------tcttaccgccgccgagtatgac------ +caaactacatatgggtcgtccaccaacccaatgtatgtctcagatactgtcacatttgt---caatgttgct +acaggagcccaggctgttgcccgctctcttgattggtccaaagttactctggatggccgcccccttactacc +at-----tcagcagtactctaaaacattttatgttc-tcccgcttcgcgggaagctatctttttgggaggst +gggacaactaaa--gctggttacccttataattataatacgactgctagtgaccagattttaattgaaaatg +cagctggtcac------cgtgttgctat-ctctacttacactaccagccttgg--------------cgctg +gccctgtgtcagtttc-tgcagtcggtgtgttagctccacactcggctcttgcagttcttgaggatactatt +gact---------accctgctcgcg----cccacacttttgatgacttttgcccggagtgccgtggtc---t +tggtttgcaggggtgtgccttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattaa-tt----t--actt---t------gt +gccc-cct--------tc-atag-tttct----gc------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355315.1/17255/1-7255 |Hepeviridae isolate HESQL151, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccaccagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccctggcgaatgctgtggtggttcggccgtttttatcccgtgttcagaccgatattct +cattaacctgatgcaacctcgacagcttgtgtttcggcctgaagtcctctggaaccatccgatccagcgagt +tatacataatgagttggagcaata---ctgccgagccc-gcgctggccgctgccttgaggtaggtgctcacc +caagatccatcaatgataaccccaatgttctgcaccggtgcttcctccgcccggtcggaagagatgtccagc +gctggtattctgctcccactcgcggcccagcagccaactgccgccgttctgcgctgcgaggtttgccccctg +tcgatcgcacatattgcttcgacgggttttcccgctgcgcctttgccgctgagaccgggatcgctctgtatt +cactgcatgacctttggccctcagatgttgcggaggctatggcccgtcacgggatggcgcgcttgtatgccg +ccctccactta-cctcctgaggttttgttaccgcctggtacttaccacacaacttcctatcttctgattcac +gacggcaatcgtgccgtcgtgacttatgagggggatactagtgcgggctataaccacgatgtgtctatactt +cgtgcatggattcgcaccactaaaatagttggagaccacccgttggtgatagagagggtccgcgccatcggc +tgccattttgtcttactccttactgcagcccctgagccatccccaatgccttatgtcccgtaccctcgttca +acagaggtgtatgttaggtccatattcggccctggc---------gggtcgccttcgcttttcccgtcagcc +t----------gttctactaagtcca-cattccacgctgtcccggtccatatttgggaccgacttatgcttt +ttggtgccaccttagatgaccaggccttttgttgctcgcggcttatgacctatcttcgcgggattagctata +aagtgaccgttggcgcacttgtcgccaacgagggctggaatgcctcggaggatgcgctaactgctgtgatta +ctgcagcgtacttgaccatctgtcatcagcgctacctacggacccaggctatttctaaaggcatgcgtcggc +tagaggtagagcatgcccaaaagtttattacaaggttatatagctggttgttcgaaaagtc---------ag +gccgtgattacatccctggccgccagcttcagttttatgcacagtgccgtcgctggctctcggctggcttcc +atctggaccctagagttctcgtctttgacgagtcagtcccctgc---cgctgccggagctttctaaagaa-- +----ggtcaccggaaaattttgctgttttatgaagtggttggggcaaga------gtgcacctgttttctgg +----------------aaccagcggagggcctggttggtgactgcggc--------catgacaacgaggcct +atgaagggtctgaagtcgaccccgccgagcctgctcaccttgatgtttccgggacttatgcggtccatggcc +gccagcttgaggctctatatagggcacttaatattccagatgatattgcggctcgtgcgtcacgtctgacgg +ctactgtggaacttgccgccagcccaggtagactcgagtgccgtacggtgcttgggaataagattttccgca +cgtcgataaccgatggtgcccatctcgaggtcaatggtcc------------------------tgagcagt +acgtcttgacatttgatgactcccgccaggtgatgggggctgggcctcacagcctcacgtatgaacttgtcc +ctgctggcctgcaggtcaaaatatcttct-------aatggcttggattgtaccgctatattctcc---cct +ggtggggcaccaagcgctgcaccaggtgaagtggcggcattctgtagcgccttatacaggtataataggttt +acccagcgccattcgctgaccggtgggctgtggctgcaccctgaggggctccttggcctattcccccctttc +tccccggggcatctttgggagtctgcaaaccccttttgcggtgagagtacactttatacacgaacctggtct +acatctggcttctctagtgacttctccccacctgaggcggccatcgccaccacagtccctaacat----ggg +gctacccctgggtgccccctcctctgccagtgatat-----------------ctgggtgtt---------- +---------cccaccgccc----tctgaggggt--------------cggtgaccgtcccgccacccgcaac +cccggttagtaagccaattaa---------------------------------------cccgcc------ +------------------------------------------------------------------------ +-tagctttac-------------------------------------------------------------- +-------------tacatct----gggccccctgtctgcgagccatctatactactaccggccctaaccccg +g---------------------------------------------tcagtaacccggccaactcggctagt +ttcactacacctagg-------------------------------------ccctccgcccgtgagccgcc +cgtactgcc--------------------------------------gccggcccgcactcgccggt----- +-------------------tactttacacatatcctgatggtgccaaggtgtatgcaggctctttgtttgag +tcagattgtgactggctggtcaatgcatctaaccctggccaccgtcctggtggtggcctctgtcatgcattt +taccagcgcttcccggagtcgt------tccacccgactgactttgtcatgcgcgaagg---tctcgctgca +tacactttgagcccgcgtccgatcattcatgctgtggcccccgattatagggttgagcagaaccccaagaga +ctagaggcagcatatcgtgagacctgctcccgcctcggcacagctgcctacccgctactggggtcagggatt +taccaggtccctgtaggtttgagcttcgatgcctgggagcgtaaccaccgcccgggcgacgaactctacctt +actgagccagctgccacc-------------------------------------------------tggtt +cgaggctaataagccgaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattaccgaggacactgc +cc------------gcacagctaaccttgcgcttgagatcg------------actccgctactgaggtggg +ccgtgcttgc---gctggctgcactattagtcccgggattgtccactaccagttcaccgccggggtgcccgg +ctccgggaagtctaggtctgtacagcaaggggatgttgatgtcgtcgttgtgccaactcgtgagcttcgtaa +cagttggcgacgccgcggctttgctgcttttacaccccacacagcagctcgtgtcaccgctggccggcgcgt +agtgatagatgaggcgccctcgcttccaccgcatttgttgttgctacatatgcagcgagcctcatcggtcca +tcttctcggtgatcccaatcagatccctgccatcgactttgagcatgccggtttggtcccagcaattcgccc +tgagttagcccctactagttggtggcatgtcacccaccgctgtcccgccgatgtgtgtgagctcatacgcgg +ggcctaccccaagattcagacgaccagccgtgtgttgagatctttattttggaatgag------tctgcggt +gggtcagaagttggttttcacgcaggcagccaaggcggctaaccctggtgcaattaccgtccatgaagccca +gggcgcaacgttcactgagaccactattatagccacggccgacgccagaggtctcattcaatcttcccgtgc +acatgctatcgttgcacttactcgtcatacagagaagtgcgtcattctcgacgcccctggcctattgcgcga +ggtcggcatttctgatgtaattgtcaacaacttt------------------------------ttcttggc +cggtg--gtgaagtgggccaccatcgcccttctattataccccgtggtaacccagaccagaatttagacac- +-----tcttcaggcgtttcccccatcctgccagattagcgcttaccaccagttggctgaggagctgggccac +cggccggccccagtggccgccgtcctgcccccctgtcctgagcttgagcagggtttactctacatgccgcag +gagcttacggtgtccgatagtgtcttggtctttgagctcacggacatagttcattgccgtatggctgcccct +agtcaacgtaaggcagtcctttctacgctcgtcggcaggtacggccgccgaacgaagctgtacgaggcggcc +cattctgatgtccgtgagtccttagggaggttcatccctaccatcggaccggtccaggctactacatgcgag +ctatacgagctggttgaggccatggtggagaagggccaggacggctccgccgtgctcgagcttgacctctgc +aaccgtgacgtctcgcgtattacatttttccagaaggattgtaacaaatttacaacaggtgagactattgcc +cacggtaaggtgggccagggcatttcagcttggagcaaaaccttctgcgcgttatttggcccgtggttccgc +gccattgagaaggagatactagctctgctcccacctaatgttttctatggtgatgcctatgaggagtcagtg +ttttctgcagccatttctggggccggctccagtatg---gtttttgagaatgatttttctgagtttgatagt +acccaaaacaatttttctct------------------cggccttgagtgcgttatcatggaggagtgtggc +atgccccagtggcttatccggctgtaccacttggttagatcagcctggattttgcaagccccgaaagaatcc +ttgaaaggtttttggaagaagcattccggcgagcctggcactctcctttggaacaccgtttggaacatggcg +atcatagcacattgctatgaattccgtgatttgagagtggctgcgttcaaaggggatgattcagtggttctc +tgcagtgactatcgtcagagccgcaatgcggccaccctgatagccggctgcgggttgaaattgaaggttgat +taccggcctataggcctgtatgccggcgttgtagtggccccgggcctcggtgcacttcctgatgtcgtccgg +ttcgcagggcgactatctgagaagaactggggcccgagccccgaacgcgccgaacagttgcgactagcagtt +tgtgacttccttcgagggttaacgaatgttgcacaggtttgtgttgatgtcgtgtcccgtg-------ttta +cggggttagcccagggctggtgcataaccttatcggcatgttacagactattgcagatggaaaggcccactt +tactgagactgtcaagcctgtgctagatcttacaaattctatcatacagaggttggaatgaataacatgtt- +c----------------tgtgcattgcccatggg------------ttcaccatgcgccctagggctgttct +gctgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcctatcacaacccggggctggggctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgtcccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgccgtttcacccgcgcctgatacagccccagtccctgatgttgactctcgtggtgccatcttgcgccgaca +gtacaatctgtccacttctcctttaacctcatctgtagcctctggaactaatcttgttttgtatgctgcccc +gcttaatcctcttctgcctcttcaagacggcaccaacactcacattatggcaactgaggcatctaattacgc +tcagtatcgggttgttcgagctacaatccgctatcgccctttagtgccgaatgccgtcggtggttatgcaat +ttctatttccttctggcctcaaactacaactacacccacctctgttgacatgaattccattacttctaccga +tgttagaattctagtccagcctggcatagcctctgagctggtcatcccgagtgagcgccttcactatcgtaa +tcaaggctggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggcttggtcatgctttg +tattcatggttctcctgttaattcctacaccaacacgccctataccggagcacttgggctcctcgactttgc +actcgagcttgagtttaggaacttgacccctgggaacactaacacccgtgtatcccgttacaccagtacagc +ccggcaccgtctgcgccgtggtgccgatgggacagccgagcttacaaccactgcagccacacgttttatgaa +ggacctgcacttca---ccgggacaaac---ggtgttggtgaggtgggccgtggtatagccctaacgctatt +taatcttgctgacacacttctcggcgggctgccgacagaattgatttcgtcggccggaggccaactgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaacgcacagca +ggataagggcattgctataccacacgatatagacttgggggactcccgagtggtcatacaagactatgacaa +ccaacatgagcaggaccggcccaccccgtcaccggccccatcccgcccattttcagtccttcgagctaatga +tgttctgtggctctc-----------------------------tttgactgcagctgaatacgac------ +caaactacttatggctcgtcgaccaaccccatgtatgtttcagacactgtcacatttgt---taatgtggcg +acgggcgcccaggctgttgcccgatcccttgactggtccaaggtcactctggacggccggctactcaccacc +at-----ccagcagtattccaagacattttatgtgt-taccgcttcgtggcaagctttccttttgggaggct +ggtacgactaag--gctggctacccctacaattataacaccactgctagtgaccagattctgatcgagaatg +cagccggtcac------cgtgttgctat-atctacttatactactagtcttgg--------------cgccg +gccctgtgtctgtttc-tgcggtcggcgttcttgctccttattctgctttagctgtgcttgaagatactatc +gatt---------atcctgctcttg----cccatacttttgatgatttctgccctgagtgccgtaatc---t +cggcctgcagggctgtgctttccagtc--------tactgttgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-t----ttt------gt +gccc-cct--------tc------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355317.1/17165/1-7165 |Hepeviridae isolate HESQL059, complete genome +------------------------------------------g-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggttcggccgttcctttcccgcgtgcagacagagattct +tattaatctgatgcaaccccggcagctggtgtttcgccctgaggtgctttggaaccaccctatccagcgggt +tattcacaatgaattagaacagta---ttgccgggccc-gggctggccgttgcttagaggttggggcccacc +cgagatctattaatgacaaccccaatgttttacaccggtgtttcctgcgaccggttgggagggacgtccagc +gttggtactctgcccccacccgcggtcctgcggctaactgccgccgctccgccctgcgcggcctcccccctg +ccgaccgcacctactgctttgacgggttttcccgttgcgcttttgctgcagagactggcatagccctttact +ctttgcacgacctgtggccagctgatgtcgcggaggccatggccagacatgggatgacacgcctgtatgccg +cattacacctc-cctcctgaggtgctcttaccacccggcacctaccacacaacttcatatctcttaatccac +gatggagatcgtgccgttgtgacctatgagggtgatactagtgcaggctataaccatgatgtctctatactt +cgtgcatggatccgcacaactaagatagttggtgaccatccattggtgatagagcgtgtacgggccattggt +tgtcattttgtgctgctgctcactgcggcccctgagccgtcaccgatgccttatgtcccataccctcggtcg +acggaggtgtacgtccgctctatatttggccccggc---------gggtctccgtccctgttcccgtcagct +t----------gctccacaaaatcta-catttcatgccgtcccggtccacatctgggaccggcttatgcttt +ttggcgccacccttgatgatcaggcattctgctgctcgcggcttatgacctacctccgcgggattagctaca +aggttactgttggcgcccttgtcgccaatgaggggtggaatgcctcagaggacgccctcactgctgttatta +ctgcggcgtatttgaccatctgccaccagcgttatctccgcacccaggctatatctaagggcatgcgccggc +tggaggttgagcatgctcaaaaattcattacgagactttacagctggctatttgagaagtc---------cg +gccgtgattatatccctggtcgccagctccagttctatgcacagtgccgccgttggttatcagcgggatttc +atcttgatcctagggtgcttgtttttgatgagtcagtgccctgc---cgctgcaggacgtttcttaagaa-- +----agttgcgggtaaattctgctgttttatgaagtggctggggcagga------gtgcacctgcttcttgg +----------------agccggcagagggcctggtcggcgatcacggt--------catgataatgaggcct +atgaagactctgaagtcgaccaggctgagcccgcacatcttgatatctctgggacctatgctgttcacggcc +gccagcttgaggccctgtatagggcacttaacatcccacacgacattgctgcccgggcgtcccgtttaaccg +ccactgttgagctcgtggcaggcccggagcgcctagagtgccgcactgtgctcgggaataaaaccttccgga +caacggtggttgacggcgctcatcttgaggcaaacggtcc------------------------tgagcagt +acgtcctttcgtttgatgcctctcgtcagtcaatgggggccgggtcgcacaatcttacttacgagcttaccc +ccgccggtttgcaagttaagatttcatcc-------aacggcttggactgcaccgcaacattcccc---ccc +ggcggcgcccccagcgccgaaccaggggaggtggccgctttctgcagtgccctttataggtacaacaggttc +actcagcgacactcgctgacgggtggattgtggctgcaccctgaggggctgttgggtctcttcccccctttc +tcccctggacacctctgggagtctgccaaccccttttgcggggaggggaccctgtatactcgtacttggtct +acatctggtttttctagtgattttgcccccccggaagcggctgtccctgtgccggccgctactct----ggg +gcctcctc---gcccaacaccccccacaagtgacat-----------------ttgggtgct---------- +---------gccgccaccc----tccgaggaat--------------cccaggctgatgcagcgcccgcccc +tgttg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctcctgaacccgttcaaccacccagc +cctgccgaacctgag-------------------------------------gccccagcgcgtaagccgtc +aacaccatt--------------------------------------gcctcgccgcactcgccgtc----- +-------------------tcctctatacctacccggacggtgctaaagtgtatgcagggtcactgtttgag +tcggactgtgactggctggttaatgcgtcaaaccctggccaccgacctgggggtggtctttgtcatgctttt +taccagcgttaccctgagtcgt------tccatccaactgagtttattatgcgcgacgg---cctcgccgcg +tatactctgacaccccgccctatcatccatgcagtggcccccgattatagggttgagcagaacccaaagagg +ctcgaggcagcgtaccgggagacctgctcccgtcgcgggactgccgcttacccactcttgggctcgggtata +tatcaagtccctgtcagccttagttttgatgcctgggagcggaaccatcgccccggggacgagctctacctg +accgaccccgctgctacc-------------------------------------------------tggtt +tgaggctaataagccggcaca--------------------------------------------------- +------------------------------------------gccggccctcacaataacagaggatacggc +cc------------gcacggctaacctggcattagagatcg------------atgcggccacagaggttgg +ccgtgcttgt---gcaggttgcacggttcgtcccggggtcgtgcattaccaattcactgctggggttccagg +ttcagggaagtcaaggtctatacagcagggggatgttgatgtggtggttgtccccacccgggagcttcgcaa +tagctggcgccgcaggggctttgcagcctttacacctcacacggcggctcgcgtcaccacgggccgccgcgt +tgtaattgacgaggccccgtctctccccccgcatttgctgctgctgcatatgcagcgggcctcgtcggtcca +tctccttggcgacccaaatcagattcccgccatagattttgagcatgccggcttggtccctgcaatacgccc +tgagctcgcacctaccagctggtggcatgtcacacatcgctgtcctgccgatgtgtgtgagcttattcgcgg +agcctatccgaaaatccagactactagtcgtgtgctgcgctccttattctggaacgag------cccgccat +tggtcagaagctagttttcacacaggccgctaaggctgccaaccctggtgcaattacagtccatgaggccca +gggcgctacctttacggagaccacagttatagctacagctgatgctaggggcctcattcaatcttctcgggc +ccatgccatagttgcactcacccgccacacagagaagtgcgtcattctcgacgcccctggtctgcttcgcga +agtcggcatatcggatattattgttaataacttc------------------------------ttccttgc +tggcg--gagaggtgggtcaccatcgcccctctgtgataccccgcggtagctccggccaaaaccttgagac- +-----attgcaagctttcccaccttcttgtcagattagtgcttaccatcagttagccgaggaactaggccac +cgcccagcccccgttgctgccgtcctgcctccctgccctgagcttgagcagggtttgttgtatatgccgcag +gagctcacggtgtctgatagcgtgttggtattcgaactcacagatatagttcactgccgtatggctgcccct +agccagcggaaggccgtcttatctacgcttgtgggcaggtacggacgcagaacgaaattgtatgaagcggct +cattctgatgtccgagagtccttagccaggttcatccccacaattgggcctgtccaggtcaccacatgtgaa +ttatatgagttggttgaggctatggtggagaagggccaggatggctctgcagtgctcgagcttgacctctgt +aatcgcgatgtatcacgcatcacatttttccaaaaagattgcaataaattcaccaccggagagaccattgct +cacggcaaggtcggccagggcatctcggcatggagtaagaccttttgtgccctgttcggcccgtggttccgt +gccatcgaaaaagaaatactgtctttgctcccgcctaacatcttttatggcgacgcatatgaggagtctgta +tttgctgccgctgtgtcaggggcggggtcatgcatg---gtgttcgagaatgatttctcagagttcgacagc +actcaaaataacttctccct------------------tggcctcgaatgcgtaatcatggaggaatgtggc +atgccccagtggctaattcgattgtaccacctcgttcggtctgcctggactctgcaggccccgaaggagtcc +cttaaaggattttggaagaagcattctggtgagcccggtaccctcctatggaacaccgtttggaatatggcg +atcatagcacactgctatgagttccgtgattttagggttgccgcttttaaaggcgatgactcggtggtcctt +tgtagtgactaccgtcagagccgcaacgcggcagccctgatcgcgggctgtgggctcaaattgaaggttgac +taccgtcctattgggttatatgctggtgtggtggtggcccccggcttggggacactacctgatgtggtgcgc +tttgctggtcggctgtctgagaagaactggggccctgggccagaacgggccgagcagttgcgcctcgcagtt +tgtgatttccttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtctcgtg-------ttta +tggagttagccctgggttggtacataaccttattggcatgttgcagaccattgctgacggcaaggcccattt +tacggagactgtgaaacctgtgcttgaccttacaaattctatcatacagcgggtagaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgtttt +gctgctgctcctcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gtcgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtttcgcaacccggggctggagctcgccctc +gacaaccgccccg---------------ccccctcggctcctcttggcgcgatcagtccca----------- +------gcgcccctccgttgccccccgccgtcgatctacccca---------gctggggctgcgccgttgac +tgccgtatcgccagcccccgatacagcccctgtcccagatgttgactcgcgcggggctatcctgcggcggca +gtacaatttgtctacatccccgcttacatcatctgtcgcctcgggcactaatttagttctttatgctgcccc +attaaaccctcttctgcccctccaggatggcactaacactcatattatggcaactgaggcgtctaattatgc +tcagtaccgggtcgttcgggccacgatccgttaccggccgttggtgccgaatgctgtcggcggttatgcaat +ttctatttcattttggccccagactaccaccacccctacatctgttgatatgaattccattacctccactga +tgtcaggattctagttcaacctggtatcgcctccgaattagttatccctagtgagcgtctccattaccgcaa +ccagggttggcgctctgttgagacatcgggtgtggctgaagaggaggccacttccggtctggtgatgctttg +tattcatggttcccctgttaattcttatactaacaccccctatactggggcgcttgggcttcttgatttcgc +attacagcttgagttcaggaatttgacaccagggaacaccaacacccgtgtgtcccggtacacaagcacagc +ccgtcaccggctgcgtcgcggtgccgacggcactgccgagctcaccaccacagctgctacgcgctttatgaa +agacttgcacttca---ccggtacgaac---ggggtcggtgaggtgggccgtgggattgccctgacattgtt +taatcttgctgacacgcttctcggtggtctgccgacagaattaatttcgtcggctgggggacagttgtttta +ctcccgccctgtcgtctcagccaatggcgagccgactgttaagttgtatacatctgtagagaatgcgcagca +agataaggggatcgccattccacatgatatagatctgggtgattctcgtgtggtgatccaagactatgataa +tcagcatgagcaggaccggcccaccccttcacccgctccatcccgccctttcttagttcttcgtgctaatga +tgttctatggctctc-----------------------------ccttactgctgctgagtacgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctcggacactgttacatttgt---caatgtagct +acaggagcccaggccgttgcccgctcccttgattggtctaaagttactttggacggccgccctcttaccacc +at-----tcagcagtattctaaaacattttatgtcc-tcccgcttcgcgggaaattatccttctgggaggct +ggcacgactaag--gctggctatccttataactataataccactgctagtgatcagattttgattgagaatg +cagctggccat------cgtgttgctat-ctccacttacaccactagcctggg--------------cgccg +gccctgtgtcggtctc-tgcagtcggtgtattggccccgcattcggctcttgctgttcttgaggatactacc +gatt---------acccggctcgcg----ctcatacttttgatgatttttgtccggagtgccgcgccc---t +tggtttgcaggggtgcgccttccagtc--------tactattgctgagcttcagcgcct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattaa-tt----t--cctt--tt------gt +gccc-cct--------tc------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355319.1/17167/1-7167 |Hepeviridae isolate HESQL055, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccatcagtttatcaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggctaattccgccctggcgaatgctgtggtggtccggccgttcttatcccgtgtgcaaactgaaatcct +tattaacttgatgcaaccccggcagcttgtgttcagacctgaggtcctttggaaccacccgatccagcgagt +catacataatgagctagagcagta---ctgccgagctc-gtgctggtcgttgtcttgaggtgggtgcccacc +cgaggtccatcaatgacaaccctaatgttttgcaccggtgcttcctccgcccggctgggagagacgtacagc +gttggtattctgcccccacccgtggcccagcggccaattgccgccgctccgcgctacgtggtctgccccctg +tcgatcgcacatattgcttcgacgggttctcccgctgtgcctttgccgctgagaccggtattgccttatatt +cattgcatgacctttggccttcagatgttgcagaagctatggcccgccacgggatgacgcgtttgtatgccg +ccctccatcta-cctcctgaggtcctattaccacctggcacttatcatacgacctcttacctcttgatccat +gacggtaaccgcgccgtcgtgacttatgagggagacaccagtgcaggctataaccatgacgtgtccatactt +cgtgcttggatccgaaccactaagatagttggtgaccatccactggtgatagagagggtccgcgctattggc +tgccattttgttctgcttctaactgcagcccctgagccgtctcccatgccttatgttccgtaccctcgctca +acagaggtgtacgttagatccatattcggccctggc---------gggtcgccctctcttttcccgtcagcc +t----------gttctactaaatcta-cattccatgccgtcccagttcacatatgggaccggcttatgttgt +tcggcgccaccttagatgaccaagccttctgctgctcacggctcatgacctatcttcgtgggatcagctaca +aagtaacggtcggcgcgcttgttgcgaacgagggctggaatgcttcggaggatgcgctcaccgctgtgatca +ctgcagcatatcttactatttgtcaccagcgctacctccgaactcaggctatttccaaaggtatgcgccggc +tggaggttgagcatgcccagaagtttatcacaaggttgtatagctggttgtttgagaagtc---------ag +gccgtgattacatccccggtcgccagcttcagttctatgcacagtgccgtcgctggctctcagctggtttcc +acctagatcctagagtccttgtttttgatgaggcggtcccctgc---cgttgccggagcttcttaaagaa-- +----ggctgccggaaaattttgttgttttatgaaatggttggggcagga------gtgcacctgttttcttg +----------------agccagcggagggcctggttggcgactgtggc--------cacgacaatgaggctt +ttgaggggtctgatgtggaccctgctgagcctgttcaccttgatatttctgggacctatgcagttcatggcc +gccagcttgaggccctctatagggcgttaaatatcccgcatgatattgtggcccgcgcgtcacgtttggcgg +ctactgtggaagttgcggccagcccaggccgacttgagtgccgtacggtgctcggtaataagaccttccgta +catcaataactgatggcgctcaccttgaggttaacggccc------------------------cgagcagt +acgtcctgacatttgatgactcccgtcaggcaatgggcgctgggccccacagccttacgtacgagcttgttc +cagccggcctgcaggttaaaatatcctct-------aatggcctggattgcaccgcagtttttccc---cct +ggtggggcgccgagcgctgcgccgggtgaggtagcggccttttgtagcgccctatatagacacaataggttc +acccagtgccactcgctgaccggcggactttggttgcaccctgaggggctccttggtttgttcccccctttc +tcccctgggcacctttgggagtctgcgaaccccttctgcggtgagagcacactctacactcgaacttggtcc +acatctggtttttctagtgacttttccccccccgaggcggctgccgtcgccccagtacttgacat----agg +gccacccccgggtaccccctcatctgttagtggtgt-----------------ttgggtgct---------- +---------tccgccacct----tccgaggggt--------------cggcgatcgtcttgccacctgaaat +tccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ccagtaagtcttctagctcgcctagc +cttatcacacctaga-------------------------------------ccccccgctcataagccgcc +catactacc--------------------------------------gtcggctcgcacccgccggc----- +-------------------tcctttatacttatcctgatggggccaaggtgtacgcgggctccttgtttgag +tcagattgtgattggctggtcaatgcatctaaccctggccaccgccctggcggcggcctctgtcatgcattt +taccaacgttttccagagtcgt------tctatccgaccgactttgttatgcgtgaagg---cctcgccgca +tatactttgagtccacgcccaatcatccatgctgtggcccccgactatagggttgagcagaatcccaagagg +ttagaggcggcatatcgtgagacctgttcccgcctcggcacggctgcctacccgttactggggtcagggatc +taccaggtccctgtaggtttaagtttcgatgcctgggaacgtaaccaccgtccgggtgacgagctttatctc +actgaaccggctgccgcc-------------------------------------------------tggtt +tgaagccaataagccggccca--------------------------------------------------- +------------------------------------------accagccttaacaattactgaggataccgc +cc------------gtacggctaaccttgcacttgagattg------------actctgccactgaggtggg +ccgcgcttgt---gccggctgcaccgtcagccccggggttgtccactatcagtttactgccggggtccctgg +ctctgggaaatctaggtctatacagcagggtgatgttgatgttgtggtcgtaccaactcgtgagctccgtaa +tagctggcggcgccgtggctttgccgctttcacaccacacacagcggcccgcgttaccaccggccggcgtgt +tgtgatagacgaggcaccttcgctcccaccgcatttgctgctacttcatatgcagcgagcctcatcagttca +cctccttggtgatcccaatcagatccccgctatcgatttcgagcatgccggtttggtcccggcaatccgccc +tgagcttgccccgactagttggtggcatgtcacccatcgctgccctgctgacgtgtgtgagctcatacgtgg +ggcctacccaaagatccagacgactagccgtgtgttgcgatctttgttttggaatgag------cctgcggt +gggtcagaagttggtttttacgcaggctgctaaagcggctaaccctggcgcaattactgtccatgaggccca +gggcgccacgtttacggagactaccattatagccacggccgatgctaggggcctcatccaatcttcccgtgc +acatgccatcgttgcgctcactcgccatacagaaaaatgtgtcattctggacgcccctggtttactgcgtga +ggtcggtatttctgacataattgtgaataatttc------------------------------ttcttagc +cggtg--gcgaagtgggccaccatcgcccttctatcataccccgtggcaatccggacttgaacctagatac- +-----tttacaagcatttcccccatcttgccaaattagtgcttaccaccagttggctgaggagctgggccat +cggcctgccccagttgctgctgtcttgcccccctgccccgagcttgagcagggcctactctacatgccacag +gagctcacggtttctgatagtgtcttgatcttcgagcttacggacatagtccactgccgtatggccgctcct +agccagcgcaaggcagttctttcaacgctcgtcggcaggtacggccgccgaacgaagctgtatgaagcagcc +cactctgacgtccgtgagtcattagggaggtttatccccactatcgggccagtccaagccaccacatgtgag +ctatatgagctggttgaagccatggtagagaagggtcaggacggttccgctgtacttgagctggatctctgt +agtcgcgatgtttcgcggattacgttcttccagaaggactgcaataaattcacaacaggtgagactatcgcc +catggtaaggtgggccaaggcatttcggcttggagtaaaaccttctgtgccttatttggcccgtggttccgt +gccattgaaaaggagatcctagccctgctcccacccaacatcttttatggcgatgcctacgaggagtcggtg +ttctctgcagccatttccggagcaggctccagtatg---gtctttgaaaatgatttttctgagtttgatagc +acgcagaataatttttccct------------------cggtctcgagtgtgtcattatggaggagtgtggc +atgccccagtggctcatccgactgtatcatctggttagatcagcctggaccttgcaggccccgaaagagtct +ttaaaaggtttttggaagaagcattccggcgagcctggcactctcctctggaacactatctggaacatggcg +atcatagcgcactgctatgaattccgtgacctgagagtggcagcgtttaagggcgatgattcagtggttctt +tgtagtgattaccgccagagccgtaatgcagctgccctgatagccggatgtgggttgaaattgaaagttgac +tatcgtcctattggattgtatgctggcgttgtagtggctccgggcctcggggcactccctgacgtcgtccgg +ttcgccggtcggttgtctgagaagaactggggcccgggccccgaacgtgccgaacagttgcgcttagcggtt +tgtgactttcttcgaagactgacgaatgttgcgcaggtctgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtacataaccttattggtatgctacagactattgctgatggaaaggcccactt +tactgagactatcaagcctgtactggaccttactaattctatcatacagaggttggaatgaataacatgta- +t----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gttgttgctcctcgtgtttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaatccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgccaccccccgccgtcgatctacccca---------gctggggctgcgccgttaat +tgctgtttcacctgcgcctgatacggccccagtccctgatgttgactctcgcggggccatcctgcgccgcca +gtacaacctgtctacttcccctttgacttcatctgttgcttccgggaccaaccttgttttgtacgctgcccc +gcttaatcctctcttgcccctccaagacggaactaacacccacatcatggcaactgaggcttctaattatgc +tcagtaccgagttgttcgggctacaatccgctaccgccctttggtgcctaatgccgtcggtggctatgcaat +ttctatctctttctggccccagaccacgactactcccacctctgttgatatgaactctatcacttctacaga +tgtcagaattttggtccaacctggcatagcctctgagttagtcataccgagtgagcgccttcattaccgtaa +ccaaggttggcgctctgttgagacctcgggtgtggctgaggaggaggcgacatcaggtttagttatgctttg +tattcatggttctcctgttaattcctacactaacacgccctacactggggcgttggggctccttgattttgc +acttgagcttgaattcagaaacttaacccctgggaacactaatacccgtgtgtcccgttatactagcacggc +ccgacaccgtttgcgccgtggtgccgatggtacggctgagcttacaactactgctgccacacgttttatgaa +ggatctgcacttca---ccgggatgaat---ggagttggtgaggtgggccgcggcatagccttaacgttgtt +caatcttgctgatacgcttctcggcggtttgccgacagaattgatttcgtcggctggaggtcaactgtttta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctccgtcgagaatgcacagca +ggataagggcattgctataccgcacgatatagatttaggagactcccgtgtggttattcaagattatgacaa +ccagcatgagcaagatcggcccaccccgtcgccggccccgtctcgtcccttctcggtcctccgggccaatga +cgttttgtggctctc-----------------------------tttgaccgcagccgagtacgac------ +cagaccacttacggctcatctactaatcctatgtatgtttcagataccgtcacatttgt---taatgtggcg +acaggtgcccaagctgttgctcgttccctcgactggtccaaagtcactctagatggccgacctctcactacc +at-----ccagcagtattctaaaacattttatgtgc-tgccgcttcgcggtaagctctccttctgggaggct +ggtatgaccaag--gctggctacccctataactataacaccactgctagtgatcagattttggttgagaacg +cagccggccat------cgcgttgccat-atctacctacactactagccttgg--------------tgccg +gtcctgtatctatttc-tgcggtcggtgttcttgcccctcattccgctttagctgtgcttgaagatactatt +gatt---------accctgctcgtg----ctcacacttttgatgatttctgccctgaatgccgtaacc---t +tggtttacagggctgtgcttttcaatc--------tactgttgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-ttt--gct------gt +gccc-c------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355321.1/17170/1-7170 |Hepeviridae isolate HESQL148, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccaccaattcattaaggctcctggcatcactactgccattgag---caagctgctctggc +cgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatcgcgtgtgcaaactgagattct +cattaacttgatgcaaccccggcagctggttttccgacctgaagtactctggaatcatcctatccaacgggt +tattcataatgagttagaacagta---ctgccgggccc-gggctggtcgctgtttagaggttggggcccacc +caagatccatcaatgacaacccgaatgttctgcatcgctgcttcttacgaccagttggcagagatgtccagc +gctggtattcagcccctacccgtggccctgcggccaactgtcgccgctctgctttgcgtggccttccccccg +ctgaccgcacttattgttttgatggattctctcgttgcttgtttgctgcggagactggtattgccctttatt +cattgcatgacctctggccggccgatgttgcggaggccatggcccggcatgggatgacacgcttatacgctg +cactacatctc-ccccctgaagtattactaccacctggtacataccacacaacttcataccttcttattcac +gacggtgatcgtgccgttgtgacttacgagggtgacactagtgcaggttacaaccacgatgtctccatactc +cgcgcatggatccgcacaaccaagatagttggcgaccatccgctggtgatagagcgtgtgcgggctatcggc +tgccactttgtgctgctgctcactgcggcccctgagccgtcaccgatgccttatgtcccataccccaggtcg +acagaggtgtacgttcgttccatattcggccctggc---------gggtccccgtccctgtttccatcagct +t----------gctctacaaaatcta-catttcatgccgtcccagttcatatttgggaccggctcatgctct +ttggtgctaccctggacgatcaggcgttttgctgctcacggcttatgacttaccttcgtgggattagttaca +aggttactgtaggcgcccttgttgctaatgaagggtggaatgcttcggaggacgctcttactgctgttatta +ccgcagcatacttgaccatttgtcatcagcgttacctccgcactcaagctatatctaaaggcatgcgccggc +tggaggttgagcatgctcaaaaatttatcacaagactctatagttggctgtttgagaagtc---------tg +gccgtgactacatccccggccgccagctccagttttatgcacagtgccgccgctggttatcggcgggtttcc +acctcgatccaagggtgcttgtttttgatgagtctacgccctgc---cgctgtaggacgtttcttaagaa-- +----ggttgcgggtaagttctgctgttttatgaagtggctggggcagga------gtgcacctgcttcctgg +----------------aaccagctgagggtttggtcggtgaccatggt--------cacgataatgaagcct +atgagggttctgaggtcgaccaggcagagcctgcccaccttgatgtttctgggacttatgccgtccatggga +gccaactcgaggccctgtacagggcgcttaacatcccgcatgacattgctgctcgagcctcccgtttaaccg +ccactgttgaacttactgcaggtccagaccgtttggagtgtcgcactgtgctcgggaataagaccttccgga +caacggtggttgatggcgcccaccttgaggcgaatggccc------------------------cgagcaat +atgtcctttcgtttgatgcctcctgccagtctatgggggccgggccgcataacctcacctatgagctcactc +ctgctggtttgcatgttaagatttcatcc-------aatggcctggcttgcactgcaacattcccc---ccg +ggtggagcccctagtgcagctccgggggaggtagcagccttttgcactgccctctataggtacaacaggttt +acccaacgccattcgcttacaggcggtttgtggctgcatcctgaggggctattgggcatcttccctcccttt +tctcccgggcatctttgggagtccgctaaccctttttgtggggagggaactttgtatacccggacttggtca +acatctggtttttctagtgatttttccccccctgaggcggctgccgctgtaccggccgccaccac----ggg +gttgcccc---accccacaccccctgttagtgacat-----------------ttgggtgtt---------- +---------gccgccaccc----tctgaggagc--------------ttcaggttgatgcagcgcctgctcc +cccag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcctgctcaaccgctcagc +cctgctaggctgggg-------------------------------------gcccccgtgcgtaagccatc +gacaccacc--------------------------------------acctccgcgtacccgccgcc----- +-------------------tcctctatacctatccggatggggcaaaggtgtatgcggggtcattgtttgag +tcagactgtgattggctggtcaatgcgtcgaaccccggccatcgccccggaggtggcctttgtcatgctttt +taccagcgctatcccgagtctt------tccatccaactgagttcattatgcgtgacgg---tctcgccgca +tatactttaactcctcggcctattatccacgcggtggctcccgattatagggttgagcagaacccaaagagg +cttgaggcagcataccgggagacctgctcccgccgtggcaccgccgcttacccactcctcggctctggcata +taccgagttcctgttagcctcagctttgacgcttgggagcgcaaccaccgccccggggatgagctttatttg +accgacctcgccgctacc-------------------------------------------------tggtt +cgaggccaataagccagcaca--------------------------------------------------- +------------------------------------------accggccctcacaataactgaagatacagc +cc------------gcacagccaacctagcactagagatcg------------acgctgccacggaggttgg +ccgggcttgc---gccggttgtacagttagtcctggggttgtgcactatcaatttactgccggggtcccagg +ttcagggaagtcgcgatctatccagcagggggacgtcgatgtggtggttgtccccactcgggagcttcggaa +tagctggcgtcgccggggttttgcagccttcacgccccacacggcggcccgtgttaccacgggccgtcgtgt +cgtgattgatgaggccccatcccttccgccgcacctgctgcttttacatatgcagcgggcctcgtcggttca +ccttctcggtgacccaaatcagattcctgctatagactttgagcatgccggcctggttcccgcaatacgtcc +tgagctcgcacccaccagttggtggcatgtcactcaccgttgccccgctgatgtgtgcgagcttatacgcgg +ggcctaccccaaaatccagactactagccgcgtgctgcggtctttattctggaacgag------cccgccat +tggccagaagttagtcttcacacaggccgctaaggctgccaaccccggtgcgattacagtccatgaggccca +gggcgctactttcacggagactacaattatagccacggccgatgctagagggctcattcaatcctcccgagc +tcacgccatagtcgcacttacccgccacacagagaagtgcgttatccttgatgcccccggtttgttacgtga +ggtcggtatatccgacataattgtcaacaatttc------------------------------tttctcgc +cggtg--gggaagtgggccaccaccgcccctctgtgataccccgcggcagtcctgaccagaacctcgcgac- +-----actacaggctttcccaccctcctgtcagattagtgcttaccatcagttagctgaggagctgggtcat +cgcccggcccccgttgccgccgtcttgcccccctgccccgaacttgagcaaggcctgctgtatatgccacaa +gagctcacggtgtctgatagcgtgctggtttttgaactcacggacatagtccattgccggatggccgcccct +agccagcggaaggccgtcctatcgacgcttgtgggtaggtatggccgccggacgaagctgtatgaggcggcc +cattccgatgtccgtgagtctctgacaagattcatccctaccatcgggcccgttcaggcaactacgtgtgag +ttatatgaactggttgaggccatggtggacaagggtcaggacggctctgccgtacttgagcttgatctttgc +aatcgcgatgtatcgcgtattacattcttccagaaagattgcaacaagttcaccacaggggagaccattgct +catggtaaggtcggccagggcatttcggcttggagcaagaccttctgtgccctctttggcccgtggtttcgt +gccattgaaaaagagatattggccctgctcccgcccaatatcttctacggcgatgcatatgaagagtctgtg +tttgctgccgctgtgtctggggcaggctcatgcatg---gtatttgagaatgatttttcagagtttgatagt +actcaaaataacttctccct------------------tggcctcgagtgtgtagtcatggaggagtgtggc +atgccccagtggctaatccggttgtaccacttggttcggtcggcctggattctacaggcgccgaaggagtca +cttaaagggttttggaagaagcattctggtgagcccggcacccttctttggaacaccatttggaatatggcg +atcatagcacattgctatgagtttcgtgatcttagggttgccgcttttaagggagatgattcggtggtcctc +tgtagcgactaccgtcaaagccgtaacgcggcggccttgattgcaggttgcgggctcaaactgaaggttgat +taccgccccattggtttgtatgctggtgtggtggtggcccccggcctggggacactacccgatgtagtacgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggccgagcagctgcgccttgctgtt +tgtgattttcttcgagggatgacgaatgttgcgcaggtatgtgttgatgttgtatcccgag-------ttta +cggtgttagccctgggctggtacataaccttattggcatgttgcaaactattgctgatggtaaggcccactt +tacagagactgttaaacctgtacttgaccttacgaactctatcatacagcgggaggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccaccgatgtcattccgcaacccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgcctcacgtcgtcgacctgcccca---------actggggctgcgccgctgac +tgctacatcaccagctcctgatacggcccccgtgcctgatgttgattctcgtggcgctatattgcggcgcca +gtataatttatctacatccccactcacatcatctgttgcttcgggcactaatctggttctttatgctgcccc +gctaaatcccctgttacctcttcaggatggcactaacactcacattatggctactgaggcatccaactatgc +ccagtaccgggttgtccgagctacgatccgttacaggccgttggtgccgaatgctgtcggcggttatgcaat +ttccatctcattctggcctcagaccactaccacccctacgtctgttgacatgaattctatcacctccaccga +tgttaggatcctagttcagcccggtattgcttccgagctagttattcctagtgaacgcctccactaccgtaa +ccaaggttggcgctctgtggagacctcgggtgtggctgaggaggaggccacttctggtttggtgatgctttg +tatccatggttcccccgttaattcctacaccaacaccccctataccggggcgcttgggctccttgactttgc +tctagaacttgagtttaggaacttgacacccgggaacaccaacacccgtgtttcccggtatacaagcactgc +ccgtcatcggctgcgccgcggcgccgacggcaccgctgagcttaccaccacagcggctacacgtttcatgaa +ggacctccacttca---ccggtacgaat---ggggtcggtgaggtgggccgtggtattgctcttacactctt +taatcttgctgacacgctcctcggcggtttgccgacagaattaatttcgtcggctgggggacagttgttcta +ctcccgccccgtcgtctcggccaatggcgagccggctgttaagttatatacatctgtggagaatgcgcagca +ggataaagggattgctattccgcatgacatagacttaggtgattcccgtgtggttattcaagattatgataa +tcagcatgagcaggatcggcccaccccttcacctgccccatctcgccctttttcggttcttcgtgctaatga +tgttttatggctttc-----------------------------ccttaccgctgccgagtatgat------ +cagactacatatgggtcgtccaccaacccaatgtatgtctcagacactgtcacatttgt---taatgtggct +acaggagcccaggctgttgcccgttctcttgactggtctagagtcactctagatggtcgtccccttactacc +at-----tcagcagtactctaaaacattttatgttt-tcccgctgcgcgggaagctatccttttgggaggct +gggacaactaaa--gctggttatccttataattataacacgactgccagtgaccagattttaattgaaaatg +cagctggtcac------cgtgttgctat-ctctacttacactaccagccttgg--------------tgctg +gccctgtgtcagtttc-cgcagtcggtgtgttagccccgcattcggctcttgcagttcttgaggatactact +gatt---------accctgcccgcg----cccacacttttgatgacttctgcccggagtgtcgcgctc---t +tggtttgcaggggtgtgccttccagtc--------cactgttgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattaa-tt----t--cctc---t------gt +gccc-cct--------tc-atag------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355322.1/17259/1-7259 |Hepeviridae isolate HESQL051, complete genome +------------------------------------------g-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggttcggccgttcttatcccgtattcaaactgacatcct +cattaacctgatgcaacctcgacagcttgtgttccgacctgaagttttgtggaaccatccaatccagcgagt +catacataatgagctggagcagta---ctgccgagccc-gcgctggccgctgtcttgaggtgggagctcacc +cgaggtccattaatgacaatcccaatgttctgcaccggtgcttcctccgcccggttggaagagatgtccagc +gctggtactctgcccccactcgtggtccagcggctaactgtcgccgttctgcgctacgtggtttgccccctg +tcgatcgcacatattgcttcgacgggttttcccgctgcgcctttgccgctgagaccgggattgctttatatt +cattgcatgacctatggccctcggatgtcgcggaggctatggctcgtcacggtatgacgcgcttgtatgctg +ccctccaccta-ccccctgaggttttgttaccacctggcacttaccacacaacctcctatcttttgattcac +gacggcaatcgtgccgtcgtcacttatgagggggatactagcgcgggttataatcatgatgtgtccatactc +cgcgcatggattcgcactactaaaatagttggtgatcacccactggtaatagagagggtccgcgccattggc +tgccattttgtcttactccttactgcagcccccgagccatccccaatgccctatgtcccgtaccctcgttca +acagaggtgtatgttaggtccatatttggccccggc---------gggtcgccttctcttttcccgtcagcc +t----------gctctaccaaatcta-cattccatgccgtcccggtccacatctgggaccggcttatgcttt +ttggtgccaccttagatgatcaggccttttgctgctcacggcttatgacctatcttcgtgggattagctata +aagtgaccgttggcacacttgtcgccaacgagggctggaatgcctcggaggatgcgctgactgctgtgatta +ctgcagcttatttgactatttgtcatcagcgctacctacgaactcaggccatctctaaaggcatgcgtcggt +tagaggttgagcatgcccaaaagtttatcacaaggttatatagctggctgtttgaaaagtc---------ag +gccgcgactacatccccggccgccagcttcagttttatgcacaatgccgccgttggctctcagctggctttc +atctggaccctagagttcttgtctttgacgaagcggtcccctgc---cgttgtcggagcttcctaaagaa-- +----ggtcgctgggaaattttgctgttttatgaaatggttggggcagga------gtgtacctgttttttgg +----------------agccagcggagggcctggttggtgactgtggt--------catgataatgaggctt +atgagggatctgaagtggaccccgccgagcctgctcaccttgatgtttccgggacttatgcggtccacggcc +gccagctcgaggccttatatagagcgcttaatatcccagatgacatcgcggctcgtgcgtcacgtctgacgg +ctactgtggaacttgccgccagtccaggcagacttgagtgtcgtacggtgcttgggaacaaaatcttccgca +catcgataactgatggtgcccatcttgaggccaacggccc------------------------cgagcagt +atgtcttgacatttgatgattctcgccaggcgatgggggccgggcctcatagcctcacgtatgaacttgtcc +ccgctggtctgcaggttaaaatatcttct-------aatggcttggattgtaccgctgtattccct---cct +ggtggggctccgagtgctgcaccgggtgaagtggcggctttctgtagcgccctctacaggtacaataggttt +acccaacgccattcgctgaccggtgggctgtggctgcaccctgaggggctcctcggcctgttcccccctttc +tctccggggcatctctgggagtctgcaaatcctttttgcggtgagagcacactttatacacgaacttggtcc +acatctggcttttctagcgacttctccccacctgaagcagcctatgccgtcccagtttctaatat----ggg +gccaccttcgggtgctccctcctctgctagtgacat-----------------ctgggtgtt---------- +---------cccgtcgcct----tctgaggggt--------------cggcggttgttccaccacccgtcac +cccggtcagtaggccaactaa---------------------------------------cccgcc------ +------------------------------------------------------------------------ +-tagccttac-------------------------------------------------------------- +-------------tatatct----aggctccctgtctgtgaaccgcctacaccaccaccggctctaaccccg +g---------------------------------------------ttagtaacccagctaatccgcctagc +cctgctacacctatg-------------------------------------ccccccgcctgcgggccgcc +tacaccact--------------------------------------accggcccgcactcgccggc----- +-------------------tcctttacacatattctgatggggccaaggtgtatgcaggttctttgtttgag +tcagattgtgattggctggtcaatgcatctaaccctggccaccgccctggtggtggcctttgccatgcattt +taccagcgcttcccggagtcgt------tccatccgagtgattttgtcatgcgtgaagg---tctcgccgca +tacactttgagcccgcgtccgatcattcatgctgtggcccccgattacagggttgagcggaaccccaagagg +ctagaggcggcatatcgtgagacctgttcccgcctcggcacagctgcctacccgctactggggtcagggatt +taccaggtccctgtaggtctaagcttcgacgcctgggagcgtaatcatcgcccaggtgatgaactttacctt +actgagccagccgccgcc-------------------------------------------------tggtt +cgaggccaataagccaactca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggataccgc +cc------------gtacagctaaccttgcgcttgagattg------------actccgctactgaggtggg +tcgtgcttgt---gctggctgtactattaaccccgggattgtccactaccagttcactgccggggttcctgg +ctccgggaagtcaaggtctatacagcagggggatgttgacgttgtggttgtgccgactcgtgagcttcgtaa +cagttggcgacgccgcggctttgctgcttttacaccccatacagctgcccgtgtcactgccggccggcgtgt +ggtgatagatgaggcaccttcgctcccaccgcacttgctgttgctccatatgcagcgagcctcatcggtcca +tcttcttggtgatcccaatcagatccctgccattgattttgagcatgccggcttggtcccggcgattcgccc +cgagttagcccctactagttggtggcatgtcacccaccgctgccccgccgatgtgtgtgagctcatacgcgg +ggcctacccaaagattcagacgaccagccgtgtgttgagatctttattttggaatgag------ccagcagt +gggccagaggctggtcttcacgcaggcagccaaggcggctaatcccggcgcaatcaccgttcatgaggccca +gggcgccacgtttactgagactaccattatagccacggccgatgctagaggcctcatccaatcttcacgtgc +acatgccatcgttgcactcactcgccatacagaaaaatgcgtcattcttgacgctcctggcctactgcgtga +ggtcggcatttctgatataattgttaataacttc------------------------------ttcctggc +tggtg--gtgaggtgggccaccatcgtccttccgctatacctcgcggtaacccagaccggaatttagacac- +-----ccttcgagcgttccccccgtcctgccaaattagtgcttaccaccagttggctgaggagttgggccat +cggccggctccagtggccgccgtcctgcccccctgccctgagcttgagcaggggttactttacatgccgcag +gagcttacggtgtccgatagtgtcctaatctttgaactcacggacatagtccactgtcgcatggccgccccc +agtcaacgtaaggcggtcctttccacgctcgtcggcaggtacggtcgccgaacgaaactgtacgaagcggct +cattctgatgttcgcgagtctttaggaaggttcatccccactatcggaccggtccaggccaccacatgcgag +ctatatgagctagttgaggccatggtggagaggggccaggacggctccgccgtgctagagcttgacctctgc +aaccgtgacgtctcgcgtattacatttttccagaaggactgtaacaaattcacaacaggtgagaccattgcc +cacggtaaggtgggccagggcatttcggcttggagtaaaaccttctgtgctctcttcggcccatggttccgc +gccattgagaaggagattctagctttgctcccgcccaatattttctatggcgatgcctatgaggagtcagtg +ttttctgcagctgtttctggggctggctccagtatg---gtttttgagaatgatttttctgagtttgatagc +acccaaaacaatttttctct------------------tggccttgagtgtgttattatggaggaatgtggt +atgccccaatggcttatccgactgtaccatctagttagatcagcctggattttgcaagccccgaaagagtct +ttgaaaggtttctggaagaagcattctggcgaacctggtactctcctctggaacacagtctggaatatggcg +atcatagcacattgttatgaattccgtgacttgagagtggcagcgtttaaaggggatgattcagtggttctc +tgcagtgactaccgtcagagcggcaatgcggccgccctaatagccggatgtgggttgaaattgaaggttgat +tatcggcctataggcttgtatgccggcgttgtagtggccccaggcctcggggcacttcctgatgtcgtccgg +tttgcaggccgattgtctgagaagaactggggcccgaaccccgagcgcgccgagcagttgcgtctagcagtt +tgtgatttccttcgagggttgacgaatgttgcgcaggtctgtgttgatgttgtgtcccgtg-------ttta +tggggtcagccctgggctggtgcataaccttattggcatgctacaaactattgctgatgggaaggcccactt +tactgagactgtcaagcctgtgctggatcttacaaattctatcatacagaggttggaatgaataacatgtt- +c----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gctgctgttcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcagtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgcctccgacgtcgtatcacaacccggggctggagctcgccctc +gacagccggtccg---------------cccccttggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgacctacccca---------actggggctgcgccgttaac +tgctgtttcaccagcgcctgatacggccccagtccctgatgttgactctcgtggcgctatcctgcgccgtca +gtataatttatccacatctcctttaacttcatctgttgcctctggaactaatcttgttttgtacgctgcccc +gcttaatcctctcctgcctcttcaagatggcaccaatactcacatcatggcgactgaggcgtccaactatgc +tcagtaccgggttgtccgggctacaatccgctatcgccctctggtgccgaatgccgtcggtggttatgcaat +ctctatttctttctggccccagactacaactacacccacctctgttgatatgaattccattacttctaccga +tgttaggattctagttcaacctggcatagcctctgagctggtcatcccgagtgagcgccttcactaccgtaa +tcaaggctggcgctctgtcgaaacatcgggtgtggctgaggaggaggcgacatcaggcctggtcatgctttg +tattcatggctctcctgttaattcctatactaacacgccctataccggggcattggggcttctcgattttgc +actcgagctcgaatttagaaatttgacccctgggaacaccaacacccgtgtgtcccgttataccagtacagc +ccggcaccgtttgcgtcgtggtgccgatgggacagctgagcttacaaccactgcagccacacgttttatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggcgaggtaggccgtggtatagccttaacgctatt +taatcttgctgatacacttctcggtgggttgccgacagaattgatttcgtcggctggaggtcaactgttcta +ctcccgcccggttgtctcagccaatggcgagccgactattaagttatacacctctgtcgagaatgcacagca +ggacaagggtattgctataccacatgatatagacttaggggactctcgtgtggttatacaagattatgacaa +ccagcatgaacaggaccggcctaccccgtcaccggccccatctcgccccttttcagtccttcgagctaatga +tgtcctgtggctctc-----------------------------tctaactgcggctgaatatgac------ +cagactacttatggctcgtcgaccaatcctatgtatgtttcagatactgttacgtttgt---caatgtggcg +acgggtgcccaggctgttgcccgatcccttgaatggtccaaggtcaccttggatggccggccgctcactacc +at-----ccagcagtattccaagacattttatgtgc-tgccgcttcgtggcaagctctccttttgggaggct +ggcacaactaag--gctggctacccttataattacaacactactgctagtgaccagattctgatcgagaatg +cagccggtcat------cgtgttgccat-atccacttataccactagtcttgg--------------cgccg +gccctgtgtctgtttc-tgcggtcggcgttctcgccccgcattctgttttagctgtgcttgaagatactatt +gact---------accccgcccgtg----cccacactttcgatgatttctgccctgagtgccgtaatc---t +cggcctgcagggctgtgctttccaatc--------cactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaa-tta-at----tt-cct--ttt------gt +gccc-cct--------tc-taaa------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355323.1/17224/1-7224 |Hepeviridae isolate HESQL005, complete genome +------------------------------------------g-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tatcaatttgatgcaaccccggcagttggtttttcgacctgaagtgctctggaatcatcctatccaacgggt +tatccataatgaacttgaacagta---ctgtcgggccc-gggctggtcgttgtctagaggttggggcccacc +cgagatccattaacgacaacccaaatgttctgcaccggtgcttcctacgaccagttgggagagatgttcagc +gctggtactctgctcccacccgcggccctgcggctaactgccgccgttctgccttgcgtggcctcccccccg +ttgaccgcacctactgctttgatggattttcccgctgctcatttgctgcagaaactggggttgccctttact +ctctgcatgacctctggccggccgatgttgcggaggctatggcccgacacgggatgacacgcttgtatgctg +cactacatctc-cctcctgaagtactactaccacccggtacttaccacacaacttcataccttctgattcac +gacggtgatcgtgctgttgtgacctatgagggtgatactagtgcaggctacaaccatgatgtctccatactt +cgtgcatggatccgcacaactaagatagtcggcgatcatccgctggtgatagagcgtgtgcgggctattggc +tgtcattttgtgctgctgcttaccgcagcccctgagccgtcaccaatgccttatgttccatacccccggtcg +acagaggtgtatgtccgctctatattcggccccggc---------gggtccccatccctattcccatctgct +t----------gctctacgaaatcca-cattccacgctgtcccggttcatatttgggaccggctcatgcttt +ttggcgctactctggatgatcaggcgttctgctgttcacggcttatgacttacctccgcgggattagttaca +aggtcactgtcggcgcccttgtcgctaacgaggggtggaatgcttcggaggacgctcttaccgctgttatta +ctgcagcgtatttgaccatttgtcaccagcgttacctccgtactcaagctatatccaagggtatgcgccgac +tggaggttgagcatgcccaaaaattcattacaagactttatagttggctgttcgagaagtc---------cg +gccgtgactatattcccggccgccagctccagttctatgcacagtgccgccgttggctatcggcgggtttcc +atcttgacccaagggtgcttgtttttgatgagtctgtgccttgc---cgctgtaggacatttcttaaaaa-- +----ggctgtgggtaagttctgctgctttatgaagtggttaggacagga------gtgcacttgctttttgg +----------------aaccagcagagggtctagttggcgaccatggc--------catgataatgaagcct +acgagggctctgaggtcgatcaggccgaacccgcccatctcgatgtttctgggacttatgccgtccatggcc +gtcaacttgaggccctgtatagggcgcttaacatcccgcatgacatcgctgcccgagcctctcgtttgactg +ccaccgtcgaactcgttgcaggtccagaccgcttggagtgccgcactgtgctcgggaataagactttccgga +cgacagtggttgatggcgcccatcttgaggtgaacggccc------------------------cgagcagt +acgttctttcgtttgacgcctctcgccagtctatgggggccgggccgcatagtctctcctacgagctcactc +ctgctggtttgcaggtcaagatttcatct-------aatggcctggattgcactgcaacattccct---ccg +ggcggggcccctagcgctgctccgggggaggtagcagccttttgcagtgctctttacaggtacaacaggttc +actcagcgccattcgcttataggtggcttgtggctacaccctgaggggttgttgggtatcttcccccctttc +tctcccgggcacctttgggagtccgctaaccctttttgtggggaggggactttgtacacccggacatggtca +acatctggcttttctagtgacttttccccccctgaggcagccgttgcaacgccggctgctactcc----ggg +tttacgcc---accctacacctcctgctagtgacat-----------------ctgggtgtt---------- +---------accgccgcct----tctgaagaat--------------ttcaggttgacacagcacccgctcc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcccgctcaaccatctagc +cccgctgggccaaag-------------------------------------gctcccgtgcgtaagccgcc +aacgccacc--------------------------------------atccccgcgcacccgccgcc----- +-------------------ttctttacacctacccggatggggcaaaggtgtatgtggggtcactgtttgag +tctgactgtgattggctggttaatgcgtcgaatcccggccatcgccctggaggcggcctttgccatgccttc +taccaacgctaccccgagtcct------tccatccaactgagtttattatgcgcgacgg---tcttgccgcg +tatactttaactccccggcctattattcatgcagtggctcctgattatagggttgagcataacccgaagagg +cttgaggcagcataccgagagacttgctcccgccgcggtaccgccgcctatccactcctcggctcgggcata +tatcaagttcccgtcagcctcagctttgacgcttgggagcgtaaccaccgccccggggacgagctctaccta +accgaccccgcagctacc-------------------------------------------------tggtt +cgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------gccggccctcacaataactgaggatgcagc +cc------------gcacagccaacctagcactggagatcg------------atgctgctacggaggtcgg +ccgggcttgt---gccggctgtgcagttagtcctggggttgtgcactatcagtttactgctggggtcccagg +ttcggggaagtcgcgttctatacagcagggggatgttgacgtagtggttgttcccactcgggagctccggaa +tagttggcgtcgccggggtttcgcagcttttacacctcatacggcggcccgtgtcaccatgggccgtcgtgt +tgtgattgatgaggccccatccctcccaccgcatttgctgctactacacatgcagcgggcctcgtcggtcca +tcttctcggcgacccgaaccagatccctgccatagactttgagcatgccggcctggtccccgcaatacgccc +tgagcttgcgcccaccagttggtggcatgttacccatcgctgccccgccgacgtgtgtgagcttatacgcgg +ggcttaccccaaaatccaaaccactagccgcgtgctgcggtctttattctggaatgag------cctgccac +tggccagaagttggttttcacccaggctgctaaggccgccaaccccggtgcgattacagtccacgaggccca +gggcgccaccttcacggaaactacaatcatagccacggctgatgctagggggctcatccaatcttcccgagc +tcatgccatagtcgcacttacccgccacacagagaagtgcgttattcttgacgcccccggcttgttacgtga +ggttggtatatcggatgtgattgtcaacaatttt------------------------------ttccttgc +cggtg--gggaggtgggtcaccaccgcccctctgtgatacctcgcggtaatcctgaccagaacctcgcgac- +-----actacaggcctttccaccttcctgccagattagtgcctatcaccagttagctgaggaacttggccac +cgcccagcccccgtcgccgctgtcttgcccccttgccctgaacttgagcaaggcttgttatatatgccgcag +gagcttacggtgtctgatagcgtgctggtttttgaactcacggacatagtccactgccggatggctgctcct +agccagcggaaggccgtcctatcgacgctcgtgggtaggtacggccgtcggacgaagctgtatgaagcagct +cactctgacgtccgtgagtccctggctaggttcatccccaccattgggcccgttcaggctactacgtgtgag +ttatatgagctggttgaggccatggtggagaaaggtcaggatggctctgccgtgcttgagctcgacctctgc +aatcgcgatgtatcgcgtattacatttttccagaaagattgtaataaattcaccacaggggagaccattgcc +catggcaaggtcggccagggcatctcggcctggagtaagaccttctgtgccctgtttggtccgtggtttcgt +gctattgaaaaagaaatattgaccttgctcccgcctaatattttctacggcgacgcatacgaggagtctgtg +tttgccgccgctgtgtcaggggcaggttcaagtatg---gtatttgagaatgatttttcagagtttgatagc +acccaaaataacttctccct------------------tggtctcgagtgtgtgatcatggaggaatgtggc +atgccccagtggctaattcggttgtaccatctggttcggtcggcctggatcttacaggcgccgaaggagtct +cttaagggattttggaagaagcattctggtgagcccggcaccctcctctggaacactgtctggaatatggca +atcatagcacactgctatgaattccgtgattttagggttgccgctttcaagggagatgattccgtggtcctc +tgtagcgactaccgtcagagccgcaatgcggcggccctgattgcaggttgcggactcaaactgaaggttgat +tatcgccctattgggttgtatgctggtgtggtggtggcccctggcttggggacgctacccgatgtggtgcgc +tttgccggccggctgtctgagaagaactggggccctggtccggagcgggctgagcaattgcgtctggctgtt +tgtgacttcctgcgagggttaacgaatgttgcgcaggtgtgtgttgatgttgtatcccgag-------tcta +tggagttagccctgggttggtacataaccttattggtatgttgcaaaccatagctgatggcaaagcccattt +tacagagactgttaaacctgtgcttgacctcacgaactctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcatcatgcgccctagggctgtttt +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtaccgcaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgtgatcagtccca----------- +------gcgcccccccgctgtcccacgtcgtcgatctgcccca---------gctggggctgcgccgctgac +cgccatatcgcctgctcctgatacagcccctgtacccgatgttgactcgcgcggcgccatattgcgacgcca +gtacaatttatctacatccccgcttacttcatctgttgcttcgggtactaatttggttctttatgctgcccc +gctaaaccctttgctcccccttcaggatggcactaatactcacatcatggccactgaggcatctaattatgc +ccagtatcgggttgtccgagctacgatccgttataggccattggtgccaaatgctgtcggcggttatgcaat +atctatctcattttggcctcagactactactacccccacgtctgttgatatgaactctattacttccactga +tgttaggattttagttcagcctggtattgcctctgagttggtcatccctagtgagcgcctccattatcgcaa +ccagggctggcgctctgtggagacctcgggtgtggctgaggaggaggctacttctggtttagtaatgctttg +tattcatggctcccctgttaattcctacaccaataccccctataccggggcgcttggactccttgatttcgc +tttggagcttgagtttaggaacctgacacccgggaacaccaacacccgtgtgtcccggtatacaagcacagc +ccgtcatcggctgcgtcgcggtgctgatggcaccgccgaacttaccactacagcagccacgcgcttcatgaa +ggacctgcacttca---ccggtacgaat---ggggtcggtgaggtgggtcgtggtattgctctcacactctt +taatcttgctgacacgcttctcggtggtctgccgacagaattaatttcgtcggctggggggcagttattcta +ctcccgtcctgtcgtctcagccaatggcgagccgactgtcaaattatacacatctgtagagaatgcgcagca +ggataaagggatcgctatcccacatgacatagatctgggtgactcccgtgtggtcatccaagactatgacaa +ccagcatgagcaggatcgacccaccccttcgcctgccccttctcgccctttttcggttcttcgcgctaatga +tgttctatggctttc-----------------------------tcttactgctgctgagtacgac------ +cagactacatatgggtcgtccactaacccgatgtatgtctcggatactgtcacatttgt---caacgtggcc +acaggagcccaggctgtcgcccgttccctcgactggtctaaagttactctggatggccgccctcttaccact +gt-----ccagcaatattccaaaacattttatgttc-tcccgctccgcgggaagctatctttctgggaggcc +gggacgactaag--gccggctacccctataattacaacacaactgctagtgatcagattctgattgaaaatg +cggctggtcat------cgtgttgctat-ttccacgtatactactagcttggg--------------cgctg +gccctgtgtctgtctc-tgcagtcggtgttatagctccacattcggctcttgcagtccttgaagacactatt +gact---------accctgcccgtg----cccacacttttgatgatttttgcccggagtgtcgcgctc---t +tggtttgcaggggtgtgccttccagtc--------tactattgctgagcttcagcgcct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaatcaa-tt----t--cctt---t------gt +gccc-cct--------tc-atag-cttt-----gt-tt---t----------------attt-c-------- +ttttttct----gc----------------ggttcgcgcccccgg---------------------aaaaaa +aaaaaaa---------------aaaa---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355324.1/17255/1-7255 |Hepeviridae isolate HESQL018, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatcccgtgttcaaactgatatcct +tattaacttgatgcaacctcgacagcttgtgttccggcccgaagtcctctggaatcatccgatccagcgagt +tatacataatgagctggaacaata---ctgccgagccc-gcgctggccgttgtcttgaagtgggtgcccacc +caagatctattaatgataaccccaatgttctgcaccggtgctttctccgcccggttggaagagacgtccagc +gctggtactccgcccccactcgtggtccagcggctaattgccgccgttctgcgctacgcggtttgccccctg +tcgaccgcacatattgcttcgacgggttctcccgctgcgcctttgccgctgagaccgggatcgctctatact +cattgcatgacctatggccctcggatgttgcggaggctatggctcgccatgggatgacgcgcttgtatgctg +ccctccactta-ccccctgaggtcttgttaccacctggaacctatcacacaacctcctatcttctaatccac +gacggcaatcgtgccgtcgtgacttatgaaggggatactagtgcgggttataaccacgatgtgtccatactt +cgtgcatggattcgcaccaccaaaatagttggtgaccacccgctggtaatagagagggttcgcgccattggc +tgccattttgtcttactccttactgcagcccccgagccgtccccaatgccttatgtcccgtaccctcgttca +acagaggtgtatgttagatccatatttggtcctggc---------gggtcgccttctcttttcccatcagcc +t----------gctctaccaagtcta-cattccatgccgtcccggttcatatctgggaccgacttatgcttt +ttggtgctaccttagatgaccaggccttttgctgctcgcggcttatgacctacctccgcggaattagttata +aagtgactgtcggcgcacttgtcgccaacgaaggctggaatgcctcggaggatgcgttaaccgctgtgatta +ctgcagcgtatttgaccatttgccatcagcgctacctgcgaacacaggccatttctaaaggcatgcgccggc +tagaggttgagcacgcccaaaaatttattacaaggttatatagctggttgtttgaaaagtc---------ag +gccgtgactacatccccggtcgtcagctccaattttatgcgcagtgccgccgttggctctcggctggcttcc +atctggaccctagagttcttgtctttgatgaggcggtcccatgc---cgatgccggagctttctaaagaa-- +----ggtcgccggaaaattttgctgctttatgaagtggttggggcagga------gtgcacttgttttctgg +----------------agccagcggaaggcctggtcggtgactgtggc--------catgataatgaggcct +atgaggggtctgaggttgaccccgccgagcctgtccaccttgatgtttctgggacttacacggtccacggcc +gtcagcttgaagccctatatagagcgcttaatatcccggatgacattgcagcccgtgcgtcacgtctaacgg +ccaccgtggagcttgccgccagtccgggcagactcgaatgccgcacggtgcttgggaacaagatcttccgca +catcaataactgatggtgcccatctcgaggccaatggtcc------------------------tgagcagt +atgtcctgacatttgatgattcccgccaagcgatgggggccgggcctcacagcctcacgtatgagcttgtcc +ctgctggtctgcaggttaaaatatcttcc-------aacggcctggattgtaccgccatattcccc---cct +ggtggggcgccgagcgctgcaccgggcgaagtggcggctttctgtagcgccctatataggtacaataggttc +acccagcgccattcgctgactggcgggctgtggctacatcccgaggggctccttggcctgttcccccctttc +tccccggggcatctttgggagtctgcaaaccccttttgcggcgagagcacactttacacacgaacttggtct +acatctggtttttccagcgacttctccccacccgaggcggctcatgccgctccagtccctgacat----ggg +attaacctcgggtgccccctcctccgctagtgatat-----------------ctgggtgtt---------- +---------tccaccgccc----tctgaggggt--------------cggcgatcattccgccacccataac +cccggtcggtaagccaactaa---------------------------------------tccgcc------ +------------------------------------------------------------------------ +-tggtcatac-------------------------------------------------------------- +-------------tacacct----aggccacccgttcgtgagctgtccacaccaccgccggcctcaacccca +g---------------------------------------------ctagtaagccagttaattcgcctagc +ctcactgtgtctagg-------------------------------------ccccccgtccgcgagccgcc +cacaccgcc--------------------------------------atcggctcgtactcgccggc----- +-------------------ttctttatacataccctgatggggccaaggtgtatgcaggctctctgtttgag +tcagattgttactggctggttaatgcatccaaccccggccaccgtcctggtggtggtctctgccatgcattt +taccagcgcttcccagagtcgt------tttacccgaccgattttgttatgcgcgaggg---tctcgccgcg +tatactttgagcccgcgtccgattatccatgctgtggcccctgattacagggttgagcagaatcccaagagg +ctggaggcggcatatcgtgagacctgctcccgcctcggcacagctgcttaccctttactggggtcagggatt +tatcaggtccctgtaggcttgagctttgacgcctgggaacgtaaccaccgcccaggcgatgaactttacctt +actgagccggctgccgcc-------------------------------------------------tggtt +cgaggctaataagcctaccca--------------------------------------------------- +------------------------------------------gccagccctaacgattactgaggacaccgc +cc------------gcacggccaaccttgcgcttgagatcg------------attccgctactgaggttgg +tcgtgcctgc---gctggctgtactattaaccccgggatcgtccactaccagttcaccgccggggttcctgg +ctccgggaagtctaggtctatacaacaaggggatgttgatgttgtggtcgtgccaactcgcgagcttcgcaa +cagctggcggcgccgcggctttgctgcttttacacctcacacagcagctcgtgtcactgccggccggcgcgt +ggtcatagatgaggcaccctcgcttccaccgcacctgctgttgctccatatgcagcgagcctcatcagtcca +tcttcttggcgatcccaatcagatccctgccattgactttgagcacgccggcttggtcccggcgatccgccc +tgaactagctcctactagttggtggcgtgtcacccaccgttgccccgctgatgtatgtgagctcatacgcgg +ggcctacccaaagattcagacgaccagccgtgtgttgagatctctattttggaatgag------cctgcgat +aggtcagaagctggtttttacgcaggcagccaaggccgccaatcccggcgcaattaccgtccacgaggccca +gggggctacgtttactgagactaccatcatagccacggccgacgctagaggtctcattcaatcttctcgcgc +acatgccatcgttgcacttactcgccatacagaaaagtgcgttattctcgacgcccctggcctattgcgcga +ggttggcatctctgatataatcgtgaataatttt------------------------------ttcctggc +tggtg--gtgaagtgggccaccaccgtccttctaccatcccccgtggtaacccagaccggaacttagacac- +-----tctccaagctttccctccgtcctgccaaattagtgcttaccaccagttggctgaggagctgggccac +cggccggccccagtggccgccgtcctgcccccctgccctgagcttgagcaggggttactttacatgcctcag +gaactcacggtgtccgatagtgtcctaatttttgagctcacggacatagttcactgtcgtatggctgctcct +agtcaacgtaaggcagttctttctacgctcgttggcaggtatggccgccgaacgaagctgtatgaagcggcc +cattctgatgtccgcgagtctttagggaggttcatcccagctatcgggccggttcaggctaccacatgtgag +ctttacgaactagttgaggccatggtagagaagggccaggatggctccgctgtgcttgagctagacctctgc +aaccgtgatgtttcgcgcatcacattcttccagaaggactgtaacaaatttacaacgggcgagactattgcc +catggtaaggtgggccaggggatttcggcctggagtaaaaccttctgtgctttatttggcccatggttccgt +gccatcgagaaggagatcctggctttgctcccacctaatattttctatggcgatgcctatgaggagtcagtg +ttttctgcggccatttccggggctggctccagtatg---gtttttgagaatgatttttctgagtttgacagc +acccaaaataacttctccct------------------tggccttgagtgtgttattatggaggagtgtggc +atgccccaatggcttattcgactgtaccatttggttagatcagcctggattctgcaagctccgaaagagtct +ttaaaaggtttttggaagaagcattccggcgagcctggcactctcctttggaatactgtctggaatatggcg +atcatagcacactgctatgaattccgtgacctgagagtggcagcgtttaaaggggatgattcagtggttctt +tgcagtgattaccgtcagagtcgtaatgcggccactctgatagccggttgtgggttaaaattgaaggttgac +taccggcctataggtctgtatgccggtgttgtagtggctccgggcttcggggcactccctgatgttgtccgc +tttgcaggtcggttatctgagaagaattggggcccgggccccgagcgcgccgagcagttgcgcttagcagtt +tgtgactttctccgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgttacagactatcgctgatggaaaggctcattt +tactgagactgttaagccagtgctggatcttacaaactccatcatacagaggttagaatgaataacatgtc- +c----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagccctttg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaatccggggctggagctcgcccta +gacaaccggtccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccactgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtctcaccagcgcctgacacggccccagtccctgatgtcgactctcgtggcgctatcttgcgccgtca +gtataatttgtccacctctcctttaacttcatctgttgcctctggaactaatcttgtcttgtatgctgcccc +gcttaatcctctcctgcctcttcaggacggcaccaatactcatatcatggcgactgaggcgtctaattatgc +ccagtaccgggttgtccgggccacaatccgctatcgccctttggtgccgaatgccgtcggtggttatgctat +ttctatttctttctggcctcagactacaactacacccacctctgttgacatgaattctattacttctactga +tgttaggattttagtccagcctggtattgcttctgagctggtcatcccgagtgagcgccttcactatcgtaa +ccaaggttggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggtttggttatgctttg +tattcatggctcccctgttaattcttataccaatacaccctataccggggcactggggctccttgattttgc +actcgagcttgagtttagaaatctgacccctgggaacactaacacccgtgtgtcccgttataccagtacagc +ccggcaccgcctgcgtcgtggtgccgatgggacagctgagcttacaaccactgcagccacacgtttcatgaa +ggacttgcatttca---ctgggacaaat---ggtgttggtgaggtgggtcgtggtatagccctaacgctatt +taatcttgctgatacacttctcggtgggttgccgacagaattgatttcgtcggctggaggtcaactgtttta +ctcccgcccggttgtctcagccaatggcgagccaactgttaagttatacacctctgtcgagaatgcacagca +ggataagggcattgctataccacacgatatagacttaggggattcccgtgtggttatacaagattatgacaa +ccaacatgaacaagaccggcctaccccgtcaccggccccatcccgtcccttttcagtccttcgggccaatga +tgtcttgtggctctc-----------------------------tctgactgcagctgaatatgat------ +cagactacctacggctcatcgaccaatcctatgtatgtttcagatactgtcacatttgt---taatgtggcg +acaggcgcccaggctgttgcccgatcccttgattggtccaaggtcactctggacggccggccacttactacc +at-----ccagcagtactccaagacattttatgtgt-tgccgcttcgtggcaagctttccttttgggaagct +ggtacgactaag--gccggctacccttataattacaacactactgctagtgaccagattctgattgagaatg +cagccggtcat------cgtgttgctat-atctacttacactactagccttgg--------------cgccg +gccctgtgtctgtttc-tgcagtcggcgttcttgctccacattctgctttagctgtgcttgaagatactatt +gatt---------atcccgcccgtg----ctcatacttttgatgatttctgccctgagtgccgcaacc---t +cggcctacagggctgtgctttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-ccc--ttt------gt +gccc-cct---------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355325.1/17247/1-7247 |Hepeviridae isolate HESQL174, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattctgccttggcgaatgctgtggtggttcggccgtttttatcccgtgtccagactgatattct +tattaacctgatgcaaccccggcagctcgtgttccggcctgaagttctttggaatcatcctatccagcgggt +catacataatgagcttgagcaata---ctgccgagccc-gcgctggccgttgtttagaggtgggcgctcatc +caagatccatcaatgacaatcccaatgtcctgcaccggtgctttcttcgcccggtcgggagagatgttcagc +gctggtattctgcccctacccgtggtccagcggctaactgccgccgttcagcgctacgtggtttaccccctg +tcgatcgcacatattgcttcgatgggttctcccgctgcgcttttgccgctgagaccgggattgctttgtact +cactgcatgacctttggccctcggacgttgcggaggccatggctcgccacgggatgacgcgcctgtatgctg +ccctccaccta-ccccctgaggtcctgctaccacctggcacttaccacacaacttcttatctcctgattcac +gatggtaaccgtgccgtcgtgacttatgaaggtgatactagtgcgggttataaccacgatgtgtccatactt +cgtgcatggatccgcaccaccaaaatagttggagaccacccattggtaatagagagggtccgcgccatcggc +tgccattttgttctacttcttactgcagcccctgagccatccccaatgccttatgttccgtaccctcgctca +acagaggtgtatgttagatccatatttggtcctggt---------gggtcgccctctctcttcccgtcagcc +t----------gctctaccaagtcta-cattccacgccgtcccggtccatatctgggaccggctcatgctct +ttggtgccaccttagatgaccaggccttttgctgctcgcggctcatgacttatctccgcgggattagctata +aagtgactgttggtgcgctcgtcgccaacgaaggttggaatgcctcggaggatgcgcttaccgctgtgatta +ctgcagcgtatctgactatctgccatcagcgctacctacgaacacaggccatctccaaaggtatgcgtcggt +tagaggttgagcatgcccaaaaatttatcacaaggttatacagttggctgtttgaaaagtc---------ag +gccgcgattacattcccggtcgccagctccagttttatgcacaatgccgccgttggctctcggccggctttc +acctggaccccagagttctcgtctttgacgaggcggtcccctgc---cgttgccggagttttttaaagaa-- +----ggttgctgggaaattttgttgttttatgaagtggttggggcagga------gtgcacctgttttttgg +----------------agccagaggaaggcctggttggtgactgtggc--------catgacaacgaggcct +atgaggggtctgaggtggaccccgccgagcctgctcaccttgatgtttccgggacctatgcggtccacggcc +gtcagcttgaggctctatatagagcgcttaatattccagatgacattgcggcccgtgcgtcacgtctgacgg +ctacagtagaacttgccgccagcccaggccgactcgagtgtcgtactgtgcttgggaataagacttttcgca +catcaataactgatggtgctcacctcgaagccaacggtcc------------------------cgagcagt +acgtcttgacatttgatgactctcgccaggctatgggggctgggccccacagcctcacgtatgaacttgtcc +ctgccggtttgcaggtcaaaatatcttct-------aatggcttggattgtaccgctatattcccc---cct +ggtggggcaccgagtgctgcaccaggtgaagtggcggccttctgtagtgccctatacaggtacaataggttc +acccaacgccactcgctgaccggcgggctgtggctgcaccctgaggggcttcttggtctgtttccccctttc +tccccagggcatctttgggagtctgcaaaccccttctgcggtgagagcacactttacacgcgaacttggtct +acatctggtttttctagtgacttctctccacccgaggcggctcacgccgccccagtacccgacat----ggg +gccgccctcgggtgccccctcgtctgctagtgatat-----------------ctgggtgtt---------- +---------cccaccgccc----tctgagaggt--------------cggcgattgcatcgccacctgtagc +cccggttagtaagccgaccac---------------------------------------cccgcc------ +------------------------------------------------------------------------ +-aagtcctac-------------------------------------------------------------- +-------------tacatcc----aggccccctgcctgtgaaccgcccacaccaccaccggccctgactccg +g---------------------------------------------tcagtgatccagctaacccgcctagc +cttactacacataaa-------------------------------------ccccccgtccataagccgcc +cataccacc--------------------------------------accggcccgcactcgccggc----- +-------------------ttctttatacataccctgatggggccaaggtgtatgcaggttctttgttcgag +tcagattgtgactggctggtcaacgcatctaatcctggccaccgccctggcggtggtctctgccatgcattt +taccagcgtttcccggaatcat------tccacccgactgattttgttatgcgtgaggg---tcttgccgca +tatactctaagcccacgcccgatcattcatgctgtggcccctgattacagggttgagcagaaccccaagagg +cttgaggcggcatatcgcgagacctgctcccgtctcggcacagctgcttatcccttactggggtcagggatc +taccaggtccccgtaagtttaagcttcgatgcttgggagcgcaatcaccgtccaggcgatgaactatatctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggccaataagccaaccca--------------------------------------------------- +------------------------------------------gccagctctaacaattactgaggacaccgc +cc------------gcacagctaaccttgctcttgagattg------------actctgctactgaggtggg +ccgagcttgc---gccggctgtactattaaccccgggattgtccactatcagtttaccgccggggttcctgg +ctctgggaagtctagatctatacagcagggagatgttgatgttgtggttgtgccaactcgcgagcttcgtaa +cagttggcggcgccgcggctttgctgcttttacaccccacacggcagctcgcgttactgccggccggcgcgt +tgtgatagatgaagcaccttcgctcccaccgcacctgctgttgctccatatgcagcgggcctcgtcggttca +tctccttggtgacccaaaccagatccctgctattgactttgagcacgccggtttggtcccagcgattcgccc +cgaactagcccctactagttggtggcatgttacccaccgttgccccgccgatgtttgtgagctcatacgtgg +ggcctaccccaagattcagacgaccagccgcgtgttgagatctttattttggaacgag------cctgcggt +gggtcagaggctggttttcacgcaggctgctaaagcggccaaccccggcgcaatcactgtccatgaggctca +gggtgccacgttcactgagactactattatagccacggccgacgctaggggtcttatccaatcttcccgcgc +acacgccattgttgcgcttactcgccacacagagaaatgtgttattctcgacgcccctggtttgctgcgtga +ggtcggtatttctgatataattgtcaataacttt------------------------------ttcttggc +cggtg--gtgaagtgggtcaccaccgcccctctaccataccgcgtggtaatccagatcaaaacttagacac- +-----cctacgggcgtttcccccgtcctgccaaatcagtgcttaccaccaactggctgaagagctgggccac +cgaccggcccctgtggccgccgtcctgcccccttgccctgagcttgagcaggggctactctacatgccgcag +gagcttacggtgtccgatagcgtcctaatttttgaactcacggacatagttcactgtcgtatggccgccccc +agtcaacgtaaggcggttctttctacgctcgtcggcaggtacggccgtcgaacgaagctgtatgaagcggcc +cattctgatgttcgtgagtccctggggagatttatccctactatcggaccggtccaggctaccacatgtgag +ttatatgagctggttgaggccatggtggagaagggccaggatggctccgccgtgcttgagctcgacctctgc +agccgagatgtctcgcgtattacattcttccagaaggactgtaataaatttacaacaggtgagaccattgcc +catggcaaggtgggccagggcatttcggcttggagcaagaccttctgtgctctattcggcccgtggttccgt +gccattgagaaggagattctggctctacttccccctaacattttctatggtgatgcttacgaggagtctgtg +ttctctgcagccatttctggggctagctccagtatg---gtttttgagaacgatttttctgagtttgacagt +acccaaaataatttttctct------------------cggccttgagtgtgtcattatggaggagtgtggc +atgccccagtggcttatccgactgtatcatttagttagatcagcttggactctgcaggccccgaaagagtcc +ttgaaaggtttctggaagaagcattccggtgagcctggcaccctcctctggaacactgtttggaacatggcg +atcatagcacactgctatgaattccgtgatttgagggtggcggcgtttaagggagatgattcagtggttctt +tgcagtgattaccgccagagccgcaatgcagctaccctgatagccggctgtgggttgaaattgaaggttgat +taccggcctataggtctgtatgccggtgttgtggtggccccgggcctcggggcacttcctgatgttgtccgg +ttcgccggtcgattatctgagaagaactggggtccgggccccgagcgcgccgaacagttgcgcctagcagtt +tgtgatttccttcgagggctgacgaatgtggcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacagaccattgctgatggaaaggcccactt +cactgagactgtcaagcctgtgctggatcttacaaattctattatacagaggttggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggttgttct +gctgctgctcttcgtgtttttgcctatgttgcccgcgc---------------------------------- +-caccgg------ccggccagtcgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcttatcacaacccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgttaac +tgctgtctcaccagcgcctgacacggctccagtccctgatgtagattctcgtggtgctatcctgcgccgtca +gtataatttgtccacctctcctttaacttcatctgttgcttccggaactaatcttgtcttgtatgctgcccc +gcttaaccctcttttgcctctccaagacggcacgaatactcacatcatggcgactgaggcgtctaattacgc +tcagtaccgggtcgtccgggctacgatccgctatcgccctttggtgccgaatgccgtcggcggttatgcaat +ttctatctccttttggccccagactacaactacacccacctctgttgatatgaactctattacttctactga +tgttaggattttagtccagcctggcatagcctctgagttggtcatcccgagcgagcgccttcactatcgtaa +tcaaggctggcgttctgttgagacatcgggagtggccgaggaggaggcgacatcaggcctggtcatgctctg +tattcatggttcccctgttaattcttataccaacacgccctatactggggcgctggggctccttgactttgc +acttgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgatacactagtacagc +ccgacaccgtttgcgccgcggtgccgatgggacagccgagcttacaaccactgcagccacacgttttatgaa +ggacttgcatttca---ccgggacaaac---ggtgttggcgaggtaggccgcggtatagctctaacgctatt +taatcttgctgatacacttctcggcgggttgccgacagaattgatttcgtcggccggaggtcaactgtttta +ctcccgcccggttgtctcagccaatggcgagccaactgttaagttgtacacctctgtcgagaatgcacagca +ggacaagggcattgctataccacatgatatagacttaggggactcccgtgtggtcatacaagactacgataa +ccaacatgagcaggaccggcctaccccgtcaccggccccgtcccgccccttttcagtcctccgagctaatga +tgtcctgtggctctc-----------------------------cctaactgcagctgaatatgac------ +cagaccacctacggctcgtctaccaatcccatgtatgtttcagatactgtcacatttgt---caatgtggcg +acgggtgctcaggccgttgctcgatcccttgattggtccaaggtcacgttagatggtcgaccactcactacc +at-----ccagcagtactctaagacattttatgtac-tgccgcttcgtggcaagctttccttttgggaagct +ggtacgactaag--gctggctacccttacaattataacaccactgctagtgaccagattttgattgagaacg +cagccggtcat------cgcgttgctat-atctacctacactactagtcttgg--------------cgccg +gccctgtgtctgtttc-tgcggttggcgttcttgccccacactctgctttagccgtgcttgaagatactatt +gatt---------accccgcccgcg----ctcatacttttgatgatttttgccctgagtgccgcaatc---t +cggtctgcagggctgcgctttccagtc--------tactgttgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaa-tta-at----tc-ccct-ttg-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355328.1/17166/1-7166 |Hepeviridae isolate HESQL175, complete genome +--------------------------------------------------------------ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttgtcccgtgtgcaaactgagattct +cattaatctaatgcaaccccgacagctggtttttcgacctgaagtgctttggaaccatccaatccaacgggt +tattcataatgaattagaacagta---ctgtcgggccc-gggctggtcgttgtctagaagttggggcccacc +caagatccatcaatgacaacccgaatgttttgcatcggtgctttctacgaccagtcggaagggatgttcagc +gctggtactctgcccctacccgtggccctgcggctaattgccgccgctccgccttgcgtggcctcccccctg +ttgatcgtacctactgttttgacgggttctcccgctgcccgtttgctgcagagactggggtggctctctact +ctttgcatgacctttggccggccgatgttgcggaggccatggcccgacacgggatgacacgcttatacgctg +cactacacctc-cctcctgaggtgttattaccgccaggtacataccacacaacatcttaccttttgattcac +gacggcgatcgtgctgttgtgacttatgaaggtgacactagtgcaggctacaaccatgatgtttccatactc +cgcgcatggatccgcacaactaagatagttggcgaccatccgctggtgatagagcgtgtgagggctattggc +tgccactttgtgctgctgcttactgcagcccctgagccgtcaccaatgccttatgtcccatatccccggtcg +acagaggtgtatgtccgctctatattcggccccggc---------gggtccccgtcccttttcccatctgct +t----------gctctacaaagtcca-catttcatgctgttccagtccatatttgggaccggcttatgctct +ttggcgctaccctagatgatcaggcgttttgttgctcacggcttatgacctacctccgtgggattagttaca +aggtcactgtcggcgccctcgttgctaatgaggggtggaatgcttcggaggacgcccttaccgctgttatta +ctgcggcgtatttgaccatttgccatcagcgctatctccgtacccaggctatatctaagggtatgcgccgac +ttgaggttgagcatgctcaaaaatttatcacaagactttatagttggctgtttgagaagtc---------cg +gccgtgactacatccccggtcgtcagctccagttctatgcacagtgtcgccgctggttatcggcgggtttcc +accttgatccaagggtgcttgtttttgatgagtccgtgccctgc---cgttgcaggacgttccttaagaa-- +----ggttgcaggtaaattctgttgttttatgaagtggcttggacagga------gtgcacctgctttctgg +----------------aaccagcggagggcctggttggcgaccatggc--------cacgataatgaagcct +atgagggctctgaggtcgaccaggctgaacccgcccatctagatgtttctgggacctatgccgtccatgggc +gccaacttgaggccttgtatagggcgcttaacatcccgcatgacatcgcagctcgagcctcccgtctaaccg +ctactgttgagctcgctgcaagcccagaccgcctggagtgtcgcaccgtgctcgggaataagactttccgaa +caacggtggttgatggcgcccatcttgaggcgaacggccc------------------------cgagcagt +acgtcctttcgttcgacgcctctcgtcagtctatgggtgccgggtcgcatagcctcacttatgagctcaccc +ctgctggcttgcaggttaggatttcatct-------aatggtctggattgtattgcaacattcccc---ccg +ggcggggcccctagcgccgctccgggagaggtagcagctttctgcagtgccctttacaggtataataggttc +acccagcggcattcgcttacgggcggcttgtggctgcatcctgaggggttattgggcatcttcccccctttt +tcccccgggcatctctgggagtccgctaatcctttttgcggggaggggaccttgtacactcggacctggtca +acatctggtttttctagtgatttttccccccccgaagcagctgccgctgcgtcggctgatgctcc----ggg +gttacccc---accctacaccccctgctagtgatat-----------------ctgggtgtt---------- +---------gccgtcaccc----tccgaagaac--------------ttcaggttgacgcagtgcctgctcc +ttctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccccgagcctgttttaccgcccagc +cccgttgagccaggg-------------------------------------gctcccgtgcgtaagccggc +ggcaccacc--------------------------------------acctccgcgcacccgccggc----- +-------------------ttctttacacttacccggacggggcaaaggtgtatgcggggtcattgtttgag +tctgactgtgactggttggttaatgcgtcgaaccctggtcatcgtcctggagggggcctttgccatgccttt +taccaacgttaccccgagtctt------tccatccgactgagttcattatgcgcgacgg---tctcgccgcg +tatactttaactccccggcctatcattcatgcagtagcccctgattatcgggttgagcggaacccaaagagg +cttgaggcagcatatcgagagacttgttcccgccgtggtactgccgcttacccgctccttggttcgggcata +taccaagttccggttagcctcagctttgacgcttgggaacgtaaccatcgtcccggggacgagctttacctg +actgaccttgccgctacc-------------------------------------------------tggtt +cgaggctaacaagccaacaca--------------------------------------------------- +------------------------------------------gccggccctcacaataactgaggatacagc +cc------------gtacggccaacctagcactggagatcg------------atgctgctactgaagttgg +ccgggcttgt---gccggctgtacagttagccccggagttatacactatcaatttactgccggggtaccagg +ttcggggaagtcgcggtctatacagcagggggatgtcgatgtggtggttgttcccactcgagagctccggaa +tagctggcgccgccggggttttgcggcttttacgcctcacacggcggcccgtgtcaccacgggccgtcgcgt +tgtgattgatgaagccccttctctcccaccgcacttgctgctgctacacatgcagcgggcctcatcggtcca +tcttcttggcgacccaaaccagatccccgctatagacttcgagcatgccggcttggtccccgcaatacgccc +tgagctcgcgcctaccagctggtggcatgttacccatcgttgccccgccgatgtgtgtgagcttatacgcgg +ggcctaccctaaaatccagactaccagccgcgtgttgcggtcattattctggaatgag------cccgccat +tggccaaaagttagtcttcacgcaggctgctaaggctgccaaccctggtgcaattacagtccatgaggccca +gggtgccacttttactgagaccacaatcatagccacggctgatgctagggggctcattcagtcttcccgggc +tcacgctatagtcgcactcacccgccatacagagaagtgtgttattcttgacgcccccggcttgttacgaga +agttggtatctcggatataattgttaacaatttt------------------------------ttcctcgc +tggtg--gagaagtgggccaccaccgcccctccgtgataccccgtggtagtcctgaccagaacctcgctat- +-----actacaggcctttccaccttcctgtcagataagtgcttaccatcagttagctgaggaactaggccac +cgcccagcccctgtagctgctgttctgcccccttgccctgagcttgagcagggcttgctgtatatgccgcaa +gagctcacggtgtctgacagcgtgttggtctttgaactcacggatatagtccactgccggatggctgcccct +agccagcggaaggccgtcctatcgacgcttgtgggcaggtacggccgtaggacaaagctgtatgaagcagct +cactctgacgtccgtgagtcccttgctagattcatccccaccattgggcccgttcaggctactacgtgcgag +ctatacgagctggttgaggccatggtggagaagggtcaggatggttctgccgtgcttgagctcgacctttgc +aatcgtgatgtatcgcgtatcacatttttccagaaagattgtaataagttcaccacaggggagaccatcgcc +cacggtaaagtcggtcagggcatctctgcttggagtaagaccttttgtgccctgttcggcccgtggttccgt +gctattgaaaaagaaatactggccctgctcccgcctaatatcttttacggcgacgcgtatgaggagtctgtg +tttgctgctgccgtgtccggggcaggttcatccatg---gtatttgagaatgatttctcggagtttgatagc +actcaaaataacttctctct------------------cggtctcgagtgtgtagttatggaggaatgtggt +atgccccagtggctaatccggttgtaccatttggttcggtcggcctggatcctacaggcgccgaaggagtcc +ctcaagggattctggaagaagcattctggtgagcccggcaccctcctttggaataccgtttggaatatggcg +atcatagcacactgctatgaatttcgcgattttagggtcgccgccttcaaaggggatgattcggtggttctt +tgcagcgactaccgtcagagccgcaatgcagcggctctgattgcaggttgcgggctcaagctgaaggttgac +taccgccctatcgggttgtatgctggtgtggtggtggcccccggtttggggacgctacccgatgtagtgcgt +tttgcaggccggctgtctgagaagaactggggccctgggccggagcgggctgagcagttgcgcctcgctgtt +tgtgacttccttcgagggttgacgaatgttgcgcaggtatgtgttgatgttgtatcccgag-------ttta +tggagttagccctgggttggtacataaccttattggcatgttgcaaaccattgctgacggcaaggctcactt +tacagagactgttaaacctgttcttgacctcactaactccattatacagcgggtggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgttgttcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgttccgcaacccggggctggagctcgccctc +gacagccactccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccacgccgtcgatctgcccca---------actggggctgcgccgctgac +ggccacatcacccgcccctgatactgctcctgtgcctgatgttgattcgcgcggcgctatactgcggcgcca +gtataacctatctacatccccactcacgtcatctgttgcttcgggtactaatctggttctttatgctgcccc +gctaaaccctctgttgcccctccaagatggcaccaacacccatattatggccactgaggcatctaattatgc +ccagtatcgggttgtccgagccacgatccgttataggccattggtgccaaatgctgttggcggctatgcaat +atccatttcattctggcctcagactactactactcccacgtctgttgatatgaattctatcacctctactga +tgtcaggattctagtccagcctggtattgcttccgagttagttatccctagtgagcgcctccattatcgtaa +ccagggctggcgttctgtggagacctcgggcgtggcagaggaggaggctacctccggtttggtgatgctctg +catccatggctcccctgttaactcttacaccaacaccccttataccggggcacttggacttcttgattttgc +tttagagcttgagtttaggaatttgacacccgggaacaccaacacccgagtttcccggtacacaagcacagc +ccgtcaccggttgcgccgcggtgctgatggcaccgctgagcttaccaccacagcggctacacgtttcatgaa +ggacctgcatttta---ccggcacgaac---ggagtcggtgaggtgggccgtggtattgctctcacactctt +taatcttgctgatacacttctcggtggtctgccgacagaattaatttcgtcggctgggggacagttgtttta +ctcccgccccgtcgtctcagccaatggcgagccgaccgttaagttatatacatctgtagagaatgcgcagca +ggataaagggattgccatcccacatgatatagacctgggtgactcccgtgtagtcattcaggactatgataa +tcagcatgagcaagatcggcccaccccttcgcctgccccgtctcgtccgttctcagtccttcgtgctaatga +tgttctttggctctc-----------------------------tctcaccaccgctgagtatgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctcggatactgtcacatttgt---caacgtggct +acaggggcccaggcagtcgcccgctcccttgactggtctaaagttactctggatggccgtccccttactacc +at-----ccagcagtactctaaaacattttatgtcc-tcccgcttcgcgggaagttgtccttctgggaggcc +gggacaactagg--gctggttacccctataattataatacaactgctagtgaccagattttgattgaaaatg +cagctggtcac------cgtgttgctat-ttccacctataccaccagcctggg--------------cgccg +gacctgtgtcagtctc-tgcagtcggtgtactagccccacattcggctcttgcagttcttgaggatactatc +gatt---------accctgcccgcg----ctcacactttcgatgatttttgcccggagtgtcgcgccc---t +tggtctgcaggggtgtgccttccagtc--------tactattgctgaacttcagcgtct------------- +--------taagatgaaggtaggtaaaacccgggagttttaattaa-tt----t--cctt---t------gt +gccc-cct--------tc-ctag------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355329.1/17323/1-7323 |Hepeviridae isolate HESQL092, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccaccagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttctgtcccgtatccagactgacatcct +tattaatttgatgcaaccccggcagctcgttttccggcctgaagttctctggaatcacccgatccagcgtgt +tatacataatgagctggagcaata---ctgccgagccc-gcgctggccgctgtcttgaggtgggcgcccacc +caagatccatcaatgataatcccaatgttctgcaccggtgctttcttcgtccggttggtagagatgtccagc +gctggtattccgcccccactcgcggtccagcggccaactgccgccgctctgcgctacgcggtttgccccctg +tcgaccgcacatactgtttcgacgggttctcccgctgcgcttttgccgctgagaccgggattgctttgtact +cactgcatgacctctggccctcggatgttgcggaggccatggctcaccacgggatgacgcgtctgtatgctg +ccttacatcta-ccccctgaggttctgttaccacctggtacttaccacacaacctcctatttattgattcac +gacggcaatcgtgctgtcgtgacttatgagggtgatactagtgcgggctataatcacgatgtatctatactt +cgtgcatggatccgcaccactaagatagttggtgatcacccactggtaatagagagagttcgcgccatcggc +tgccattttgttctactccttactgcagcccctgagccatccccaatgccttatgttccgtaccctcgctca +acagaggtgtatgttaggtctatatttggccctggt---------gggtcgccctctcttttcccgtcagcc +t----------gctctaccaagtcta-cttttcacgccgtcccggtccatatctgggaccggcttatgcttt +ttggtgccaccttagatgaccaggccttttgctgctcgcggcttatgacttatctccgtgggattagctata +aagtgactgttggcgcactcgtcgccaacgagggctggaatgcttcggaggatgcgctcaccgctgtaatta +ctgcagcgtatctgactatctgccatcagcgctacttacgaacacaggccatttccaaaggcatgcgtcggt +tagaggttgagcatgcccaaaaatttatcacaaggctatatagttggctgtttgaaaagtc---------ag +gccgtgattacattcctggccgtcagctccagttttatgcgcaatgccgccgctggctctcggctggcttcc +acctagaccctagagttcttgtttttgatgagtctgtcccttgc---cgctgccgaagcttcttaaagaa-- +----ggttgctgggaaattttgttgttttatgaaatggttggggcagga------gtgcacctgtttcttgg +----------------agccagcggagggcctggttggtgactgtggc--------cacgacaacgaggcct +atgaggggtctgaggtggaccccgccgagcctgctcaccttgatgtttccgggacttatgcggttcacggcc +gccagcttgaggctctatatagagcacttaatgtcccggatgacattgcggctcgtgcgtcacgcctgacgg +ctactgtggaacttgccgccagcccaggccgactcgagtgccgtacggtgcttgggaacaagactttccgca +catcgataactgatggtgcccatctcgaagctaacggccc------------------------tgagcagt +acgtcttgacatttgatgactctcgccaggctatgggggctgggcctcacaccctcacgtatgaactcgttc +ctgccggtttgcaggtcaaaatatcctct-------aatggcttggattgtaccgctatattcccc---cct +ggtggggcaccaagcgcagcaccaggtgaagtggcggctttctgcagcgccctatataggtacaataggttc +acccagcgccattcgcttaccggcgggctgtggctgcaccccgaggggctccttggcctgttcccccctttc +tccccggggcatgtttgggagtctgcaaaccccttttgcggcgagagtacactttacacacgaacttggtct +acatctggtttttctagcgatttttccccacctgaggcggcccatgccgccccagcacccgacat----gga +gctaccctcgggtgccccttcgtctgctagtgatat-----------------ctgggtgtt---------- +---------cccaccgccc----tctgataggt--------------cggcgatcgccccgccgcccgcaat +cccagttagtaagccagctaa---------------------------------------cccacc------ +------------------------------------------------------------------------ +-aagtattac-------------------------------------------------------------- +-------------tgtacct----aggccccccgcccgtgagccgcccacaccaccaccggtcccaaccccg +g---------------------------------------------tcagtgggccagctaactcgcttaac +cttactacatataga-------------------------------------cctcccgcccgtaagctgcc +cacaccacc--------------------------------------accggcccgcactcgccgac----- +-------------------ttctttatacttaccccgacggggctaaggtgtatgcaggctctttgtttgag +tcagattgtgattggctggttaatgcatccaaccctggccaccgtcctggtggtggtctttgccacgcattt +taccagcgcttcccggagtcgt------tccatccgactgattttgttatgcgtgaagg---tctcgccgca +tacactttgagcccgcgtccgattattcatgctgtggcccccgattacagggttgagcagaaccccaagagg +ctggaggcggcatatcgtgagacctgttctcgcctcggcacagctgcttatcctctactagggtcagggatt +taccaggtccctgtgagtttaagctttgacgcctgggagcgtaaccaccgcccaggcgatgaactgtacctc +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggataccgc +cc------------gcacagctaacctcgcgcttgagattg------------actctgctactgaggtggg +ccgtgcttgc---gccggctgcattattaaccctgggattgttcactaccagttcaccgccggggtccccgg +ctccgggaagtctagatctatacagcagggggatgttgatgtcgtggttgtgccaactcgtgagctccgcaa +cagctggcgacgccgcggctttgccgctttcacaccccacacagcagcccgtgttactgccggccggcgtgt +ggtgatagatgaggcaccttcgcttccaccgcacttgctgctgcttcatatgcagcgagcctcatcggtcca +tcttcttggtgaccccaaccagatccctgctattgactttgagcacgccggtttggtcccagcgattcgccc +tgaattggctcctactagttggtggcatgtcacccaccgctgccccgccgatgtgtgcgagctcatacgagg +ggcttatcctaagattcagacgaccagccgtgtgctgagatctttattttggaacgag------cctgcggt +gggtcagaggttggtcttcacgcaggcagccaaagcggccaaccccggcgcaattaccgtacatgaagccca +gggcgccacgttcactgagactactatcatagccactgccgatgctagaggtcttattcaatcttcccgtgc +gcatgccatcgttgcgctcactcgccacacagaaaaatgcgtcatctttgacgcccctggcctgctacggga +ggtcggcatttctgatataattgttaataatttc------------------------------tttctcgc +cggtg--gtgaagtgggtcatcatcgcccttctaccatacctcgtggcaacccagaccaaaacttagacac- +-----cctacgagcgttccctccgtcctgccaaattagtgcctaccaccaactggctgaggagctgggccac +cggccggcccctgtagccgccgttctgcccccttgccccgagctcgagcaggggttactttatatgccgcag +gagctttcggtgtctgatagcgtcctaatttttgaactcacggacatagttcattgtcgtatggccgccccc +agtcagcgtaaggcggtcctttctacgctcgtcggcaggtatggccgccgaacgaagctgtatgaagcggcc +cactctgatgttcgcgagtctttaggaaggttcatccctaccattggtccggtccaggccaccacatgtgag +ttatatgagctggttgaggccatggtggagaagggccaggatggctccgccgtgcttgagctcgacctttgc +agccgtgacgtttcccgtattacattcttccagaaggattgcaataaatttacgacaggtgagaccatcgcc +cacggcaaggtgggccagggcatctcggcttggagtaagactttctgtgctttatttggcccgtggttccgt +gccattgagaaagagatcctggctttgctcccacccaatattttctatggtgacgcttatgaggaatcagtg +ttttctgcagccatttctggggctggctccagtatg---gtctttgagaacgatttctctgagtttgatagt +acccaaaacaatttttctct------------------tggccttgagtgtgtcattatggaggagtgcggc +atgccccagtggcttatccgactgtatcatctagtcagatcagcctggattctgcaagccccgaaagagtct +ttgaaaggtttctggaagaagcactccggcgagcctggcaccctcctttggaataccgtttggaacatggcg +atcatagcacattgctatgaattccgtgacttgagggtggcagcgtttaagggggacgattcagtggtcctt +tgtaatgattaccgccagagccgcaatgcggccgccctgatagccggctgtggattgaaattgaaggttgat +taccggcctataggtttgtatgccggcgttgtggtggctccgggtctcggggcacttcctgatgttgtccgg +ttcgctggtcgattatcagagaagaactggggcccgggccccgagcgcgccgaacagttacgcctagcagtt +tgtgacttccttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgcg-------ttta +tggggttagtcccgggctggtacataaccttattggtatgctacagactattgctgatggaaaggcccactt +tactgagactgtcaaacctgttctggatcttacaaattctatcatacagaggttggaatgaataacatgtt- +c----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcttccgacgtcctaccacaacccgggactggagctcgccctc +gacagccggcccg---------------ccctctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgccgtcgatctacccca---------actggggctgcgccgttaac +tgctgtctcaccagcgcctgatacggccccagtccctgatgttgactcccgcggtgctatcctgcgccgtca +gtataatctgtccacctctcctttaacctcatctgttgcttctggaactaacctcgtcttgtatgccgctcc +gcttaaccctcttctgcctctccaagacggcaccaatactcatatcatggcgactgaggcgtctaattacgc +tcagtatcgggttgtccgggctacgatccgttatcgccctttggtgccgaatgccgtcggtggttatgcgat +ttccatttccttctggccacagactacaactacacccacctctgttgatatgaattccattacttctactga +tgttaggattttagtccagcctggcatagcctctgagctggtcatcccgagtgagcgccttcactaccgtaa +tcaaggctggcgttctgttgagacatcgggtgtggccgaggaggaggcgacatcaggcctggtcatgctatg +tatccatggttctcctgttaattcctatactaacacgccctatactggggcattagggctccttgactttgc +actcgagcttgaatttagaaatttaacccctgggaacactaacacccgtgtgtcccgatacactagtacagc +acggcaccgtttgcgccgtggtgccgatgggacagccgagcttacaactactgcggccacacgttttatgaa +agacttgcatttca---ctgggacaaat---ggtgttggtgaggtaggccgtggtatagccttaacgctatt +caatcttgctgatacacttctcggcgggttgccgacagaattgatttcgtcggctggaggtcaactattcta +ctcccgcccggtcgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggtattgctataccacatgacatagacttaggggattcccgcgtggttatacaagactatgacaa +ccaacacgaacaggaccggcccaccccgtcgccggctccgtcccgccccttttcagtccttcgagccaacga +tgttttgtggctttc-----------------------------tttgaccgcggctgaatatgac------ +cagaccacctatggctcgtctactaatcccatgtatgtttcagatacagtcacatttgt---taatgtggcg +acaggtgctcaggctgttgcccgatcccttgattggtccaaggttactttggatggtcggccacttactacc +at-----ccagcagtactccaagacattttatgtac-tgccgcttcgtggcaagctttccttctgggaagct +ggcacgactaag--gccggctacccttataactataataccactgccagtgatcagatcctgatcgagaatg +cagccggtcac------cgcgttgccat-atctacctacactactagtcttgg--------------tgtcg +gccccccgggaatttc-ggcggtaggagaccttgccccgcattctgctttagctgtgctcgaagatactatt +gact---------atcctgcccgtg----cacatactttcgatgatttctgccctgagtgccgcaatc---t +tggtttgcagggctgtgctttccagtc--------cactgttgctgagcttcagcgtct------------- +--------caaaatgaaggtaggtaagacccgggagtcttaattaa-tt-----c-ccct--tt------gt +gccc-cct--------tc-taaa-ct-tt----gc-tc-ttt-----------------att-t-------c +tcttttct----ggg---------------ttcccgcgccccccg---------------------ggaaaa +aaaaaa----------------aaaaaaaa------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355331.1/17354/1-7354 |Hepeviridae isolate HESQL094, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggtccggccgttcttatctcgtgttcaaactgatattct +tatcaacctgatgcaacctcgacagcttgtgttccggcccgaagtcctctggaatcacccgatccagcgagt +tatacataatgagctggagcaata---ctgccgagccc-gcgctggccgctgtcttgaagtgggcgcccatc +caagatctattaatgacaaccctaatgttttgcaccggtgctttcttcgcccggttggaagagacgtccagc +gctggtattctgcccccactcgtggtccagcggctaattgccgccgttccgcgctgcgcggtttgccccctg +tcgaccgcacatactgcttcgacgggttttcccgctgcgccttcgccgctgagaccgggatcgctttatact +cactgcatgacctttggccttcggatgttgcggaggctatggctcgccatgggatgacgcgcttgtttgctg +cccttcaccta-ccccctgaagttctgttaccacctggaacttaccacacaacctcctatcttttgattcac +gacggcaatcgtgccgtcgtgacttatgagggggatactagtgcgggttataaccacgatgtgtccatactt +cgtgcatggattcgcaccaccaagatagttggtgatcacccgctggtaatagagcgggtccgcgccatcggc +tgccattttgtcttactccttactgcagcccccgagccgtccccaatgccttatgtcccgtaccctcgttca +acagaggtgtatgttagatccatatttggccctggc---------gggtcgccttcccttttcccatcagcc +t----------gctctaccaagtcta-cattccatgccgttccggtccatatctgggaccggcttatgcttt +ttggtgccaccttagatgaccaggccttttgttgctcgcggctcatgacctacctccgcgggattagttata +aagtgaccgttggcgcacttgtcgccaacgaaggttggaatgcctcagaggatgcactaaccgctgtgatta +ctgcagcgtatttgactatttgccatcagcgctacctacgaacccaggccatttctaaaggtatgcgccggc +tagaggttgagcacgcccaaaaatttatcacaaggctatatagctggttgtttgaaaagtc---------ag +gccgtgattacatccccggtcgccagctccaattttatgcgcagtgccgccgttggctttcggctggcttcc +atctggaccctagagttctcgtctttgatgaggcggtcccctgc---cgatgccggagttttctaaagaa-- +----ggccgccggaaaattttgttgctttatgaagtggctggggcaaga------gtgcacttgtttcttgg +----------------agccagcggaaggcctggttggtgattgtggc--------catgataatgaggcct +atgaggggtctgaggtggaccctgccgagcctgctcaccttgatgtctcagggacttatgtggtccacggtc +gtcagcttgaggccctatatagggcgcttaatatcccagatgacattgcagcccgtgcgtcgcgtctaacgg +ccaccgtggagcttgccgccagtccaggcagactcgaatgccgcacggtgcttgggaataagatcttccgta +catcaataactgatggggcccacctcgaggccaatggtcc------------------------tgagcagt +atgtcctgacatttgatgattctcgccaagtgatgggggctgggcctcacagcctcacgtatgaacttgtcc +ctgctggtctgcaggttaaaatatcttct-------aatggcctggattgtaccgccatatttcct---cct +ggtggggcgccgagcgctgcaccaggcgatgtggcagctttctgtagtgccctatacagatacaataggttt +acccagcgccattcgctgactggcgggctgtggctgcaccctgaggggctccttggcctgttcccccctttc +tctccggggcatctttgggagtctgcaaaccccttttgtggtgagagcacactttatacacgaacttggtcc +acatctggtttttctagcgacttctccccgcctgaggcggcctatgccgccccagtccctgacat----ggg 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+cagccggccac------cgtgttgccat-atctacttatactactagtcttgg--------------cgccg +gccctgtgtctgtttc-agcagtcggcgttcttgccccgcattctgtcttagctgtgcttgaagatactatt +gact---------atcccgcccgtg----cccatactttcgatgatttttgccctgagtgccgcaatc---t +cggcctacagggctgtgctttccagtc--------tactgttgctgagcttcagcgtct------------- +--------taaaatgaatgtaggtaagacccgggagtcttaattaa-ct----cc-c-c--ttt------tg +tgcc-ccc--------tt-cata-cc-------------tgct----------------cgt-a-------t +tctttttt----ccg---------------gtcc--cgctccgga---------------------aaaaaa +aaaaag----------------taaaaccggc---------------------------------------- +------------------------------------------ccggaaaag--------------------- +--------gagatgatttcggcttgcgtgtctttga------------------------------------ +----------- +>MW355332.1/17292/1-7292 |Hepeviridae isolate HESQL003, complete genome +--------------------------------------------------------------ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagttggtttttcgtcctgaagtgctctggaatcatcctatccaacgggt +tatccataatgaacttgaacagta---ctgtcgggccc-gggctggccgttgtttagaggttggggcccacc +caagatccattaatgataacccaaatgttttgcaccggtgctttctacgaccggttgggagagatgttcagc +gctggtactctgcccccacccgcggtcctgcggctaactgccgccgttctgccttgcgtggccttccccccg +ttgatcgtacctattgttttgacggattctctcgctgctcatttgctgcagaaactggggttgccctttatt +ctttgcatgacctctggccggccgatgttgcggaggctatggcccgacacgggatgacacgcttgtatgctg +cactacatctc-cctcctgaagtactactaccacccggtacttaccatacaacttcataccttctgatccac +gacggtgatcgtgctgttgtgacctatgaaggtgatactagtgcaggctacaatcatgatgtctccatactt +cgtgcatggatccgcacaactaagatagtcggcgatcatccgctggtgatagaacgtgtgcgggctattggc +tgccattttgtactgctgcttactgcagcccctgagccatcaccaatgccttatgttccatacccccggtcg +acagaggtgtatgtccgctctatatttggccctggc---------gggtccccatccctattcccatctgct +t----------gctccacgaaatcca-catttcacgctgtcccggttcatatttgggaccggctcatgcttt 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+ctgctggtttgcaggtcaagatttcatct-------aatggcctggattgcactgcaacattcccc---ccg +ggcggggcccctagcgctgctccgggggaggtagcagccttttgcagtgctctttataggtacaacaggttc +actcagcgccattcgcttataggtggcttgtggctgcatcctgaggggctgttgggtatcttcccccctttt +tctcccgggcacctttgggagtccgctaaccctttttgtggggagggaaccttgtacacccggacatggtca +acatctggtttttctagtgacttttccccccctgaggcagccgttgcagcgccggccgctactcc----ggg +gttatgcc---accctacacctcctgttagtgacat-----------------ctgggtgtt---------- +---------gccgccgcct----tctgaagaat--------------ttcaggttgacacagcgcccgcttc +ccccg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcctgcccaaccatctagc +cctgctgggccaaag-------------------------------------gctcctgtgcgtaagccgcc +aacgccacc--------------------------------------acccccgcgcactcgccgcc----- +-------------------ttctttacacctatccggatggggcaaaggtgtatgcggggtcactgtttgag +tctgattgtgattggctggttaatgcgtcgaatcccggccatcgtcccggaggcggcctttgccatgctttt +taccaacgctaccccgagtctt------tccacccaaccgagttcatcatgcgcgacgg---tctcgccgcg +tacactttaactccccggcctattattcatgcagtggcccctgattatagggttgagcacaacccgaagagg +cttgaggcagcataccgagagacttgctcccgccgcggtaccgccgcctacccactcctcggctcgggcata +taccaagttcccgttagcctcagctttgatgcttgggagcgtaaccatcgccccggggacgaactttacctg +accgaccttgcagctacc-------------------------------------------------tggtt +cgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------gccggcccttacaataactgaggatgcagc +cc------------gcacagccaacctagcactggagatcg------------atgctgccacggaggtcgg +ccgggcttgt---gccggctgtgcagttagtcccggggttgtgcactatcagttcactgccggggtcccagg +ttcggggaagtcgcgatctatacagcagggggatgttgacgttgtggttgttcccacccgggagctccggaa +tagttggcgccgccgaggtttcgcagcttttacaccccatacggcggcccgtgttaccacgggccgccgtgt +tgtgattgatgaggccccatcccttccaccgcatttgttgttactacacatgcagcgggcctcgtcggtcca +ccttctcggcgacccgaaccagatccctgccatagatttcgagcatgccggcctggtccccgcaatacgccc +tgagcttgcgcccaccagttggtggcatgtcacccaccgctgccccgctgacgtgtgcgagcttatacgcgg +ggcctatcccaaaatccaaaccactagccgcgtgctgcggtctttgttctggaatgag------cctgccat +tggccagaagctggttttcacccaggctgctaaggccgccaaccccggtgctattacagtccacgaggccca +gggcgccactttcacggaaactacaatcatagccacggctgatgctagggggctcatccaatcttcccgagc +tcatgccatagtcgcacttacccgccacacagagaagtgcgttattcttgatgcccccggcttgttacgtga +ggttggtatatcggatgtgattgtcaacaatttt------------------------------ttcctcgc +tggcg--gagaggtaggtcaccatcgcccctctgtgatacctcgcggtaatcctgaccagaacctcgcgac- +-----actacaggcctttccaccttcctgccagattagtgcctatcaccagttagctgaggaacttggccac +cgcccagctcccgtcgccgctgtctt------------------------------------tatgccgcag +gagcttacggtgtctgatagcgtgctggtctttgagcttacggacatagtccactgccggatggctgccccc +agccagcggaaggccgtcctatcgacgctcgtgggtaggtacggccgtcggacgaagctgtatgaagcagct +cactctgacgtccgtgagtccctggctaggttcatccccaccattgggcccgttcaggctactacgtgtgag +ttatacgagctagttgaggctatggtggagaaaggtcaggacggctctgccgtgcttgagctcgacctctgc +aaccgtgatgtgtcgcgtatcacatttttccagaaagattgtaataaattcaccacaggggagaccatcgcc +cacggcaaggtcggccagggtatctcggcttggagtaaaaccttctgtgccctgtttggtccgtggtttcgt +gctattgaaaaagaaatactagccctgctcccgcctaatattttctacggcgacgcatacgaggagtctgtg +tttgccgccgctgtgtcaggggcaggttcaagcatg---gtatttgagaatgatttttcagagtttgatagc +actcaaaataacttctccct------------------tggccttgagtgtgtggtcatggaggaatgtggc +atgccccagtggctaattcggttgtaccatttggttcggtcggcctggatcctacaggcgccgaaagagtct +cttaagggattttggaagaagcattctggtgagcccggcacccttctctggaacactgtctggaatatggcg +atcatagcacactgctatgaatttcgtgattttagggttgccgctttcaagggagatgattctgtggtcctc +tgtagcgactaccgtcagagccgcaacgcagcggccctgattgcaggctgcggactcaaactgaaggttgat +tatcgccctattgggttgtatgctggtgtggtggtggcccctggcttggggacgctacctgatgtggtgcgc +ttcgccggccggctgtctgagaagaactggggccctgggccggagcgggctgagcaattgcgcctagctgtt +tgtgacttccttcgagggttaacgaatgttgcgcaggtgtgtgtcgatgttgtgtcccgag-------ttta +tggagttagccccgggctggtacataaccttattggcatgttgcaaaccatagctgatggtaaagcccattt +tacagagactgttaaacctgtgcttgacctcacgaactctatcatacagcgggtagaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtatcgcagtccggggctggagctcgccctc +gacagccaccccg---------------tcccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccacgtcgtcgacctccccca---------gctggggctgcgccgctgac +cgctatatcacctgctcccgatacagctcctgtacctgatgttgactcgcgcggcgccatattgcgacgcca +gtacaatttatccacatctccgctcacatcatctgtcgcctcgggtaccaatctggttctttatgctgcccc +gctaaaccctttgctgccccttcaggatggcactaacactcacattatggccactgaggcatctaattatgc +ccagtatcgggttgttcgagctacgatccgttataggccattggtgccaaatgctgtcggcggttatgcgat +atctatctcattctggcctcagactactaccacccccacgtctgttgatatgaactctattacttccactga +tgttaggattttagttcagcctggcattgcttctgagttggttattcctagtgagcgcctccattatcgtaa +ccagggctggcgctctgtggagacctcgggtgtggctgaggaggaggctacttctggtttagtaatgctttg +tattcatggttctcctgttaactcttacaccaacaccccctataccggggcacttggactccttgattttgc +tttagagcttgagtttaggaatctgacacccgggaacaccaacacccgtgtgtcccggtatacaagcacagc +ccgtcatcggctgcgccgcggtgctgatggcaccgccgaacttaccaccacagcagccacgcgcttcatgaa +ggacctgcacttca---ccggtacgaat---ggggtcggcgaggtgggtcgtggtattgctctcacactctt +taatcttgctgacacgcttctcggaggtttgccgacagaattaatttcgtcagctgggggacagttattcta +ctcccgccccgtcgtctcagccaatggcgagccgactgtcaagctatatacatctgtagagaatgcgcagca +ggataaagggatcgctatcccacatgacatagatctgggtgactcccgtgtggtcatccaggactatgacaa +ccagcatgagcaggatcggcccaccccctcgcctgccccttctcgccctttctcggttcttcgcgctaatga +tgttttatggctttc-----------------------------tcttactgccgccgagtacgac------ +cagactacatatgggtcttccaccaacccgatgtatgtctcggatactgtcacatttgt---caacgtggct +acaggagcccaggctgtcgcccgttccctcgattggtctaaagttactctggacggccgccctcttactaca +at-----ccagcagtactctaaaacattttatgtcc-tcccgcttcgcggaaagctatctttttgggaggcc +gggacgactaaa--gccggctacccctataattacaatacaactgctagtgatcagattttgattgaaaatg +cagccggtcat------cgtgttgctat-ttccacgtatactactagcttggg--------------cgccg +gccctgtatctgtttc-tgcagtcggtgttttagccccacattcggctcttgcagtccttgaagacactatt +gatt---------accctgcccgtg----cccacacttttgatgatttctgcccggagtgtcgcgccc---t +tggtttgcaggggtgtgccttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggcaaaacccgggagttttaattaa-tt----tt-cctt---t------gt +gccc-cct--------tc-atag-ctttt---gat-at---t----------------attt-a-------t +ctttttct----gcg---------------gttccgcgctccccg---------------------ggaaaa +aaaaaaa---------------aaaaaaagcgt------------gttgtgggggggccaggggctttat-- +----------------------------ttataataccagggagaaaaatgagagaa--------------- +-gaagagagagatgatcctatgactgatctctttcttttat------------------------------- +----------- +>MW355336.1/17263/1-7263 |Hepeviridae isolate HESQL184, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggctaattccgccttggcgaatgctgtggtggtccggccgtttttatcccgtgttcaaacagatatcct +tattaacttgatgcaacctcgacagcttgttttccggcctgaagtcctctggaatcatccgatccagcgagt +tatacataatgagctggagcagta---ctgccgagccc-gtgctggccgttgtcttgaggtgggcgctcacc +caagatctattaatgacaaccccaatgttctgcaccggtgctttctccgcccggttgggagagacgtccagc +gttggtactctgcccccacccgtggtccagcggccaactgccgccgctctgcgctacgtggtttgccccctg +tcgaccgcacgtactgcttcgacgggttctcccgctgcgcctttgccgctgagaccgggattgctttatact +cattgcatgacctttggccttcggacgtcgcggaggctatggctcgccacgggatgacgcgcttgtatgctg +ccctccaccta-ccccctgaagttttgttaccacccggaacttaccacacaacctcctatcttctgattcac +gacggtaatcgcgccgtcgtgacttatgagggggacactagtgcgggttacaaccacgatgtgtctatactt +cgtgcatggattcgcaccactaaaatagttggtgaccacccgctggtaatagagagggtccgcgccatcggc +tgccattttgtcttacttcttactgcagcccccgagccgtccccaatgccttatgtcccgtatcctcgctca +acagaggtgtacgttagatccatatttggtcctggc---------gggtcgccttctctttttccatcagcc +t----------gctctaccaagtcta-cattccatgcagttccggtccatatctgggaccggcttatgcttt +ttggtgccaccctagatgaccaagccttctgctgttcgcggcttatgacctatctccgcggaattagctata +aagtgaccgttggcgcacttgtcgccaacgaaggctggaatgcctcggaggatgcgctaaccgctgtgatca +ccgcagcatacttgactatctgtcatcagcgctacttacgaacacaggccatttctaaaggcatgcgtcggc +tagaggttgagcacgcccaaaaatttatcacaaggctatatagctggctgtttgaaaaatc---------gg +gccgtgattacatccccggtcgccagctccaattttacgcgcagtgccgccgctggctctcggctggcttcc +atttggaccctagagttctcgtctttgatgaggctgtcccctgc---cgatgccggagcttcctaaagaa-- +----ggttgccggaaagttttgttgcttcatgaagtggttggggcagga------gtgcacttgctttttgg +----------------agccagcggaaggcctagttggtgactgtggc--------catgataatgaggcct +atgaggggtctgaggtggaccccgctgagcctgctcatattgatgtttctgggacttatgcggtccacggcc +gtcagcttgaggccctatatcgggcgcttaatatcccagatgacattgcagctcgtgcgtcacgtctgacgg +ccaccgttgagcttgccgccagcccaggcaggctcgagtgccgcacggtgcttgggaataagaccttccgta +catcaataactgatggtgctcatctcgaggccaacggtcc------------------------tgagcagt +acgtcctgacatttgatgactctcgccaagtgatgggggccgggcctcacagtctcacgtatgaacttgtcc +ctgctggtctgcaggttaaaatatcttct-------aatggcttggattgtaccgctatattccct---cct +ggaggggctccgagcgctgcaccaagtgaagtggcggctttctgtagcgccctgtataggtacaataggttc +acccagcgccattcgctgaccggtgggttgtggctgcatcctgaggggctccttggcttgttcccccctttc +tcccctgggcacctttgggagtctgcgaaccccttttgcggtgagagcacactttatacacggacttggtct +acatctggcttttctagcgatttttctccacccgaggcggcttatgccgccccagtccctgacac----ggg +gttaccctcaggtgccccctcctccgctagtgatat-----------------ctgggtgtt---------- +---------tccgccgccc----tctgaggggt--------------cggcgatcgtaccactacccataac +tccggtcggtaagccaactaa---------------------------------------cccgcc------ +------------------------------------------------------------------------ +-tggtcatac-------------------------------------------------------------- +-------------tacacct----aggccacccgcccgtgagctgtctacaccaccattggccctaacccca +g---------------------------------------------tacgtaagccagctaactcgtttagc +tttactgcacccaga-------------------------------------ccccccgttcgcgagccacc +cacaccgcc--------------------------------------atcggcccgtacccgccggc----- +-------------------ttctttatacatatccagatggggccaaggtgtatgcaggctctttgtttgag +tcagattgttactggctggtcaatgcatctaaccccggccaccgccctggtggtggtctctgccatgcattt +taccagcgctttccagagtcgt------ttcatccgaccgactttgtcatgcgcgaggg---tcttgccgca +tacactttgagcccgcgtccgatcatccatgctgtggcccctgactacagggttgagcagaatcccaagagg +ctagaggcggcatatcgcgagacctgctcccgcctcggcacagccgcctacccgctactggggtctgggatt +taccaggtccctgtgagtttaagttttgacgcctgggagcgcaaccaccgcccgggcgatgaactttacctt +actgagccggctgccgcc-------------------------------------------------tggtt +cgaggctaataagcctactca--------------------------------------------------- +------------------------------------------gccagctctaacaattactgaggatactgc +tc------------gcacagctaaccttgcccttgagatcg------------actccgccaccgaagtagg +tcgtgcctgc---gccggctgcactattaaccccgggattgtccactaccagttcaccgccggggttcctgg +ctctgggaagtctaggtctatacagcagggggatgttgatgttgtggttgtgccaacccgtgagcttcgcaa +cagctggcggcgccgtggctttgctgcttttacacctcacacagcggctcgtgttactgctggccggcgtgt +ggtaatagatgaagcaccctctcttccaccgcacttgctgttgctccatatgcagcgagcctcatcagtcca +tcttcttggcgaccccaatcagatccctgccattgactttgagcacgccggcttggtcccggcgattcgccc +tgagctagcccctactagttggtggcatgtcacccaccgttgccccgccgatgtgtgtgagctcatacgcgg +ggcctatccaaagattcagacgaccagccgtgtgctgagatctctattttggaatgag------cctgcgat +aggtcagaagttggttttcacgcaggcagccaaggccgctaatcccggcgcaattaccgttcatgaggccca +gggtgccacgtttactgagactaccatcatagccacagccgatgctagaggtcttattcaatcttcccgtgc +acatgccatcgttgcactcactcgccatacagaaaagtgcgttattcttgatgctcctggcctattgcgtga +ggtcggcatttctgatataattgttaacaacttt------------------------------ttcctggc +tggtg--gtgaggtgggccaccatcgcccttctaccatcccccgcggcaacccggaccagaacttagacac- +-----cctccaagcgttccctccgtcctgccaaatcagcgcttatcaccagttggctgaggagctgggccat +cggccggccccagtggcagccgtcctgcccccctgccctgagcttgaacaggggttactctacatgccgcag +gagcttacggtgtccgatagtgtcttaatttttgaactcacggacatagtccactgtcgtatggctgccccc +agtcaacgtaaggcggttctctctacgcttgtcggtcggtacggccgccgaacgaagctgtatgaagcagcc +cattctgatgtccgcgagtctctgggtaggttcatccctactattggaccggtccaggccactacatgtgag +ttatatgaattggttgaggccatggtggagaagggccaggatggttccgctgtgcttgagcttgacctttgc +aaccgtgatgtctcgcgtattacatttttccagaaggattgtaacaaatttacaacaggtgagaccattgcc +catggtaaggtgggtcagggcatttcggcttggagtaaaaccttctgtgctttatttggcccatggttccgt +gccattgagaaggagattctggctctcctcccacccaatattttctatggcgatgcctatgaggagtcagtg +ttctctgcagccatttctggggctggctctagtatg---gtttttgagaacgatttttctgagtttgacagc +acccagaataatttctctct------------------tggccttgagtgcgttattatggaggagtgtggc +atgccccaatggcttatccggctataccatttagttaggtcagcctggattttgcaggccccgaaagagtct +ttgaaaggattttggaagaagcattccggcgagcctggcactctcctttggaacaccgtttggaacatggca +atcatagcacactgctatgaattccgtgacctgagagtagcagcttttaaaggggatgactcagtggttctt +tgcagcgattaccgtcagagccgcaatgcggccgctttgatagccggttgtgggttgaaattgaaggttgat +taccgacctataggtttgtatgccggcgttgtagtggctccgggcctcggggcacttcctgatgtcgttcgc +ttcgcgggtcgattatctgagaagaattggggcccgggccccgagcgcgccgagcagttgcgcctagcagtt +tgtgattttcttcgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagcccagggctggtgcataaccttattggcatgctacagactattgctgatggaaaggcccattt +tactgagactgttaagcctgtgctggatcttacaaactctatcgtacagaggttggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcgccatgtgccctagggctgttct +gttgctgttcctcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaacccggggctggagctcgcccta +gacagccggcccg---------------ccccctcggttcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgccgtcgatctacccca---------actggggctgcgccgctgac +tgctgtctcaccagcgcctgatacggccccagttcccgatgttgactctcgtggcgctattttgcgccgtca +gtataatctttccacctctcctttaacttcgtctgttgcttctggaactaatcttgtcttgtatgctgcccc +actcaatcctcttctgcctcttcaggacggcaccaatactcatatcatggcgactgaggcgtctaactatgc +tcagtaccgggttgttcgggctacaatccgctatcgccccttggtgccgaatgccgttggtggctatgcaat +ttccatttctttctggcctcagactacaactacacccacctctgttgacatgaattctattacctctactga +tgttaggattttagtccagcctggcatagcctcagagctggtcatcccgagtgagcgcctccactatcgtaa +tcaaggctggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggcttggtcatgctttg +cattcatggttcccctgttaactcttataccaacacgccctatactggggcactggggctcctcgattttgc +actcgagcttgaatttagaaatctgacccccgggaacactaacacccgtgtgtcccgttatactagtacagc +ccggcaccgcctgcgtcgtggtgccgatgggacagctgagcttacgaccactgcagccacacgttttatgaa +ggacttgcatttca---ctgggacgaat---ggtgttggtgaggtgggccgtggtatagccttaacgctatt +taatcttgctgatacacttctcggtgggttgccgacagaattgatttcgtcggctggaggtcaactgtttta +ctcccgcccggttgtctcggccaatggcgagccaactgttaagttatatacctctgtcgagaatgcacagca +ggataaaggtattgccataccacatgatatagacttaggggattcccgtgtggttatacaagactatgacaa +ccaacatgaacaggaccggcctacaccgtcaccggccccatcccgtcccttttcagtccttcgagccaatga +tgtcctgtggctctc-----------------------------tttgactgcagctgaatacgac------ +cagactacctatggctcgtcaactaatcctatgtatgtctcagatactgtcacacttgt---taatgtggcg +acaggcgcccaggctgttgcccgatcccttgattggtccaaggtcactttggatggtcggccacttactacc +at-----ccagcagtactctaagacattttatgtgc-tgccgcttcgtggcaagctatccttttgggaagct +ggtacgactaag--gctggctacccttacaattacaacactactgctagtgaccagattctaattgagaatg +cggccggccat------cgtgttgctat-atctacttatactactagtcttgg--------------cgccg +gccctgtgtctgtttc-tgcagtcggcgttcttgcccctcattctgctttagctgtgcttgaagatactatt +gatt---------atcccgcccgtg----cccacactttcgatgatttctgccctgagtgccgcaacc---t +cggcctgcagggctgtgctttccagtc--------cactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattaa-tt----cc-t-c--ctt------gt +gccc-cct--------tc-taat-tt---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355339.1/17291/1-7291 |Hepeviridae isolate HESQL042, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggtccggccgttcttatctcgtgttcaaactgatatcct +tattaacttgatgcaacctcgacaacttgtgttccggcccgaagttctctggaatcatccgatccagcgagt +tatacataatgagctggagcaata---ttgccgagccc-gtgctggccgttgtcttgaagtgggcgcccacc +caagatctattaatgataaccccaatgttttgcaccggtgctttctccgcccggttggaagagacgttcagc +gctggtactccgcccccactcgaggaccggcggctaattgccgccgttctgcgctacgtggtttgccccctg +tcgatcgcacatattgctttgacgggttctcccgctgcgctttcgccgctgagaccgggatcgcattatact +cactgcatgacctttggccctcggatgttgcggaggctatggctcgccatgggatgacgcgcttgtatgctg +ccctccatcta-ccccctgaagttctgttaccgcctggaacttatcacacaacctcctatcttctgattcac +gacggcaatcgtgccgtcgtgacttatgagggggatactagtgcgggttataaccacgatgtgtctatactt +cgtgcatggattcgcaccaccaaaatagttggtgatcacccgctggtaatagagagggtccgcgctattggc +tgccattttgtcttacttcttactgcagcccccgagccgtccccaatgccttatgttccgtacccccgttca +acagaggtgtatgttagatccatatttggccctggc---------gggtcgccttctcttttcccatcagcc +t----------gctccaccaagtcta-cattccatgccgtcccggtccatatctgggaccggcttatgcttt +ttggtgccaccttagatgaccaggccttctgctgctcgcggcttatgacctacctccgcggaattagttata +aagtgactgttggcgcacttgtcgccaacgaaggctggaatgcctctgaggatgcgctaaccgctgtgatca +ctgcagcgtatttaactatttgtcatcagcgctacctacgaacacaggccatttctaaaggcatgcgtcggc +tggaggtcgagcacgcccaaaaatttatcacaaggctatatagctggttgtttgaaaagtc---------ag +gccgtgattacattcccggtcgccagctccaattttatgcgcagtgccgccgttggctctcggctggctttc +atctggaccctagagttctcgtctttgacgaggcggtcccctgc---cgatgccggagctttctaaagaa-- +----ggtcgccggaaaattttgctgttttatgaagtggctcgggcagga------gtgtacttgtttcttgg +----------------agccagcggaaggcctggttggtgactgtggc--------catgacaatgaggcct +atgaggggtctgaggtagaccccgccgagcctgctcatcttgatgtctctgggacttatgcggtccacggcc +gtcagcttgaggccctatatagagcgcttaacatcccagatgacattgcagcccgtgcgtcacgtctaacgg +ctaccgtggagcttgccgccagtccaggcagactcgaatgccgcacggtgcttgggaataagatcttccgca +catcaataactgatggtgcccatctcgaggccaacggtcc------------------------tgagcaat +acgtcctgacatttgatgattcccgtcaagtcatgggggctgggcctcacagcctcacgtatgaacttgtcc +ctgctggtctgcaggttaaaatatcttct-------aatggcctggactgtaccgccatattccct---cct +ggcggggcaccgagcgctgcaccaggcgaagtggcggccttctgtagcgccctatacaggtataataggttt +acccagcgccattcgctgactggtgggctgtggctgcatcccgaggggctccttggcttgttcccccctttc +tccccggggcatctttgggagtctgcaaaccccttttgcggtgagagcacactttatacacgaacctggtcc +acatctggtttttctagcaacttctccccacccgaggcggcctatgccgccccagcccctgacat----ggg +gttaacctcgagtgccccctcctccgctagtgatat-----------------ctgggtgct---------- +---------tccaccgccc----tctgaggagt--------------tggcgatcattccgccacccataac +cccggtcggtaagccaactaa---------------------------------------tctact------ +------------------------------------------------------------------------ +-tggtcttac-------------------------------------------------------------- +-------------tacacct----aggccacccgtccgtgagccgtctacaccaccgccggccctaacccca +g---------------------------------------------ttagtaagccaactaatccgcctagc +catactgtacctaag-------------------------------------ccccccgtccgcgagtcgcc +cacaccgcc--------------------------------------atcggcgcgcactcgccggc----- +-------------------ttctttatacatatcctgatggggccaaggtgtacgcaggctctctgttcgag +tcagattgctactggctggttaatgcatctaaccccggccaccgtcctggtggcggtctctgccatgcattt +taccagcgcttcccagagtcgt------tttatccgaccgattttgttatgcgtgaggg---tctcgccgca +tacactttgagcccgcgcccgatcattcatgctgtggcccctgattacagggttgagcagaaccccaagagg +ctggaggcggcatatcgtgagacctgctcccgtctcggcacagctgcctatccactactagggtcggggatt +tatcaggtccctgtaggtctaagctttgacgcctgggagcgtaatcaccgcccaggcgatgaactctacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagcctaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacaccgc +tc------------gcacggccaaccttgcgcttgagatcg------------actccgctactgaggttgg +tcgtgcctgc---gctggctgcactattagccctgggattgttcactaccagttcaccgctggggttcctgg +ctccgggaagtctaggtctatacagcagggggatgttgatgttgtggtcgtgccaacccgtgagcttcgcaa +cagttggcggcgccgcggctttgctgcttttacacctcacacagcagctcgtgtcactgccggccggcgtgt +ggtgatagatgaagcaccctcgcttccaccgcacctgttactgctccatatgcagcgagcctcatcagtcca +tcttcttggcgatcccaatcagatccctgccattgactttgagcacgccggtttggtcccggcgattcgccc +tgagctagcccctactagctggtggcatgtcactcaccgttgccccgccgatgtttgtgagctcatacgcgg +ggcctacccaaagattcagacgaccagccgtgtgttgagatctttattttggaatgag------cctgcgat +aggtcagaggctggtttttacgcaggcagctaaggccgccaatcccggcgcaattaccgttcacgaggccca +gggggctacgtttaccgagactaccatcatagccacggccgatgctagaggtcttattcaatcttctcgcgc +acacgccatcgttgcacttactcgccatacagaaaagtgcgttattctcgacgcccctggcctattgcgtga +ggttggcatttctgatataattgtgaataatttt------------------------------ttcttggc +tggtg--gtgaagtgggccaccatcgcccttctaccatcccccgcggcaacccagatcgaaacttagacac- +-----cctccaagcatttcctccgtcctgccaaatcagcgcttaccaccagttggctgaggagctgggccac +cggccggcccctgtggccgccgtcctgcccccttgccctgagcttgagcaggggttactctacatgccgcag +gagcttacggtgtccgatagtgtcctaatttttgaactcacggatatagttcactgccgtatggccgcccct +agtcaacgtaaggcggttctttctacgctcgtcggcaggtacggccgccgaacgaagctgtatgaagcggtc +cattctgatgtccgcgagtctttagggaggttcatccctcctatcggaccggttcaggccaccacatgtgag +ttatatgaactggttgaggccatggtggagaagggccaggatggttccgctgtgcttgagcttgacctctgc +aaccgtgacgtctcgcgtattacattcttccagaaggattgtaacaaatttacaacgggtgagactattgct +catggtaaggtgggccaggggatttcggcttggagtaaaaccttctgtgctttatttggcccatggttccgt +gccatcgagaaggagattctggctctgctcccgcccaatactttttatggcgatgcctatgaagagtcagtg +ttttctgcggccatctccggggctggctcctgtatg---gtttttgagaacgatttttctgagtttgacagc +acccaaaataatttctctct------------------tggccttgagtgcgttatcatggaggagtgtggc +atgccccagtggcttatccgactgtaccatttagttagatcagcctggattctgcaagccccgaaagagtct +ttgaaaggctcctggaagaagcactccggcgagcctggcactctcctttggaacaccgtctggaacatggcg +atcatagcacactgctatgaattccgtgacctgagagtggcagcgtttaaaggggatgattcagtggttctc +tgcagcgattaccgtcagagccgtaatgcggccaccctgatagctggttgtgggttaaaactgaaggttgat +taccggcctataggtttgtatgccggtgttgtagtggccccgggcctcggggcacttcctgatgttgtccgc +tttgcaggtcgattatctgagaagaactggggtccgggccccgagcgcgccgaacagttgcgcctagcagtt +tgtgactttcttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttatcggtatgctacagactattgctgatggaaaggcccattt +tactgagactgttaagcccgtgctggatcttacaaactctatcatacagaggttagaatgaataacatgtt- +c----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgcctggcc------------gccgtcgtgggcg-gcgcagcggcagtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgatgtcgtatcacaatccggggctggagctcgcccta +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtttcaccggcgcctgacacggccccagttcctgatgttgactctcgtggtgctatcctgcgccgtca +gtataatttatccacctctcctttaacttcatctgttgcctctggaactaatcttgtcttgtacgctgcccc +gcttaatcccctcctgcctcttcaggacggcaccaatacccacatcatggcgactgaggcgtctaattacgc +ccagtaccgggtcgtccgggccacaatccgctatcgccccttggtgccgaatgccgtcggcggttatgcgat +ttctatttccttctggcctcagactacaactacacccacctctgttgacatgaactctattacttctactga +tgttaggattttagtccagcctggcatagcctctgagttggtcatcccgagtgagcgcctccattaccgtaa +tcaaggctggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcgggcttggtcatgctttg +tattcatggctcccctgttaattcttataccaacacgccctatactggggcgcttgggctacttgactttgc +acttgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgttacactagtacagc +ccggcaccgcctgcgtcgcggtgccgatggcacagctgaacttacaaccactgcagccacacgttttatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggtgaggtgggtcgtggtatagccctaacgctatt +taatcttgctgatacacttctcggtgggttgccgacagaattgatttcgtcggctggaggacaactgtttta +ctcccgcccggttgtctcagccaatggcgagccaactgttaagttatatacctctgtcgagaatgcacagca +ggataagggcattgccataccacacgatatagacttaggggattcccgtgtggttatacaagactatgacaa +ccaacatgaacaggaccggcctaccccgtcgccggccccatctcgtcccttttcagtccttcgggccaatga +tgttttgtggctctc-----------------------------tctgactgcagctgaatatgac------ +cagactacttatggctcgtcgaccaatcctatgtatgtttcagatactgtcacatttgt---taatgtggcg +acaggcgcccaggctgttgcccgatcccttgattggtccaaggtcactctggacggccggccactcactacc +at-----ccagcagtactccaagacattttatgtgc-tgccgcttcgtggtaagctttccttttgggaagct +ggtacgactaag--gctggctacccttataattacaacactactgctagtgaccagattctgattgagaatg +cagccggtcac------cgtgttgctat-atctacttacactactagccttgg--------------cgccg +gccctgtgtctgtttc-tgcagtcggcgttcttgctccgcattctgctttagctgtgcttgaagatactatc +gatt---------atcccgcccgtg----cccatacttttgatgatttctgccctgagtgccgtaacc---t +cggcctacagggctgtgctttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggcaagacccgggagtcttaattaa-tt----cc-c-c--ctt------gt +gccc-cct--------tc-taat-ct-ct----gc-tt-tgtt----------------att-t-------c +ttttttct----gcg---------------tc---------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355340.1/17393/1-7393 |Hepeviridae isolate HESQL040, complete genome +--------------------------------------------------------------ggtcgatgc- +---catggaggcccatcagtttatcaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggtccggccgtttttatcccgtgttcaaactgatatcct +tattaacctgatgcaaccccggcagcttgtgttccggcctgaagtcctctggaatcatcctatccagcgagt +catacataatgagctggagcaata---ctgtcgagccc-gtgccggccgttgtcttgaagtgggcgcccacc +caagatctatcaatgataaccccaatgttctgcaccggtgctttctccgcccggttgggagagatgtccagc +gttggtattccgctcccactcgtggtccagcggctaactgccgccgttctgcgctacgtggtttaccccctg +tcgatcgcacatactgcttcgacgggttctcccgctgcgcttttgccgctgaaaccgggatcgctttatact +cactgcatgacctctggccctcggatgtcgcggaggctatggctcgtcacgggatgacgcgtttgtatgctg +ccctccattta-ccccctgaggttctgctaccacccggcacttatcatacaacctcctatcttttgatccac +gacggcagtcgtgctgtcgtgacttatgagggggataccagtgcgggttacagccacgatgtgtctatactt +cgtgcatggattcgcaccaccaaaatagtcggcgatcacccactggtaatagagagggtccgcgccatcggc +tgccattttgtcttactcctcactgcggctcccgagccatccccaatgccttatgtcccgtaccctcgttca +acagaggtgtatgttaggtccatatttggcccaggc---------gggtcgccctctctttttccatcagcc +t----------gctctaccaagtcta-cattccatgctgtcccggttcatatttgggaccggctcatgcttt +ttggtgccactttagatgatcaggccttttgctgctcgcggcttatgacctatcttcgcgggattagctaca +aagtgaccgtcggcgcacttgtcgccaacgagggctggaatgcctcggaggatgcgctaaccgctgtgatta +ctgcagcgtacttgaccatctgtcatcagcgctacctccgaacacaggccatttctaagggcatgcgccggc +tagaggttgagcatgctcaaaaatttatcacaaggctttacagctggctgtttgaaaagtc---------ag +gccgtgactacatccccggtcgccagcttcagttttatgcacagtgccgccgttggctctcggctggcttcc +atctagaccctagagttctcgtctttgacgaggcagtcccctgc---cgctgccggagcttcctaaagaa-- +----ggtctccggaaaattttgctgttttatgaaatggttggggcagga------gtgcacttgttttctgg +----------------agccagtagagggcctggttggtgactgtggc--------catgataatgaggcct +atgaagggtctgaggtggaccccgccgagcccgcccaccttgatgtttccgggacttatgcggttcatggcc +gccagcttgtggctctatatagagcgcttaatatcccggatgacatcgttgctcgtgcgtcacgtttgacgg +ctactgttgaacttgccgccgatccaggcagactcgagtgccgtacggtgcttgggaataaggttttccgca +catcaataactgatggtgcccacctcgaagccaacggccc------------------------cgagcagt +acgtcctgacatttgacgactctcgccaagcgatgggggctgggcctcacagcctcacgtatgaacttgttc +ctgccggactgcaggttaaaatatcctct-------aatggcttggattgcaccgctatatttccc---ccc +ggtggggcgccaagcgctgcaccgggtgaagtggcggctttctgtagcgccctgtacaggtataataggttc +acccagcgccattcgctgaccggtgggctgtggctgcaccctgaggggctccttggcctgttcccccctttt +tctccggggcatctttgggagtctgcgaatcccttttgcggcgagagcacactttatacacgaacctggtcc +acatctggtttttctagtgatttttctccaccagaggcggcctatgccgccccggtccctgacgc----ggg +gccaccctcgggtgccccctcctctgctagtgatac-----------------ctgggtgtt---------- +---------tccaccgccc----tccgaggggt--------------cggcgatcgccccgccacccgtaac +tccggttagtaagcctactaa---------------------------------------cccgct------ +------------------------------------------------------------------------ +-tagtcttac-------------------------------------------------------------- +-------------tgcacct----cggcttcctgctagtgggccgcttacaccaccaccggccctaaccccg +g---------------------------------------------tcagtaagccagctaacccgtctagc +cctactaaacctagg-------------------------------------ccccctgcctgcgagcccct +tacaccgcc--------------------------------------atcggctcgcacccgccggc----- +-------------------tcctttatacgtatcctgatggggccaaggtgtatgcaggctctttgtttgag +tcagattgtgactggctggttaacgcatctaatcctggccatcgccctggtggcggtctctgccacgcattt +taccagcgcttcccagagtcgt------ttcacccgacagatttcgtcatgcgtgaagg---tctcgccgca +tacaccttgagcccgcgcccgatcattcatgctgtggcccccgactatagggttgagcggaaccccaagagg +ctagaggctgcataccgtgagacctgctcccgcctcggcacagctgcctacccactactggggtcgggaatt +taccaggtccctgtgggcttaagcttcgacgcctgggagcgtaatcatcgcccaggtgatgaactttacctt +ccagagccggccgccgcc-------------------------------------------------tggtt +cgaggctaataaaccgaccca--------------------------------------------------- +------------------------------------------gccggccctaacaattactgaggataccgc +cc------------gcacggctaacctcgcgcttgagattg------------actccgcaactgaggtggg +tcgtgcttgc---accggctgcactatcagccccggaattgttcactaccagtttaccgccggggttcctgg +ctccgggaagtctaggtctatacagcagggggatgttgatgtcgtggttgtgccaactcgtgagctccgcaa +cagttggcgacgccgcggctttgcagcctttacacctcacacagcagctcgtgttaccgccggccggcgtgt +ggtgatagatgaggcaccatcgctcccgccgcacttgctgttgctccatatgcagcgagcttcatcggtcca +tcttcttggggatcccaaccagatccctgctattgactttgaacacgccggcttggtcccagcgattcgccc +cgagctagcccctactagttggtggcatgttacccatcgctgccccgccgatgtgtgcgagcttatacgcgg +ggcttacccaaagattcagactaccagccgtgtgttgagatctttattttggaatgaa------cctgcagt +aggtcagaagctggtttttacgcaggcagccaaggcggccaaccctggcgcaatcaccgttcatgaggccca +gggcgctacgtatactgagactaccattatagccacggctgatgctagaggccttatccaatcttctcgtgc +acatgctatcgttgcacttactcgccacacagagaagtgcgtcatctttgacgcccctggcctactgcgtga +ggtcggtatttctgatataattgttaataacttt------------------------------ttcctggc +tggtg--gtgaagtgggccaccatcgtccttccactataccccgcggcaacccagaccagaaccttgatac- +-----cctccgagcgttccctccgtcttgccagatcagcgcttactaccagctggctgaggagctgggccat +cggccggccccagtggccgccgtccttcctccttgccctgagcttgagcaggggctgctctacatgccgcag +gagctcacggtgtccgatagtatcctaatttttgaactcacggacatagttcactgccgtatggctgccccc +agccaacgtaaggcggttctttctactctcgtcggcaggtacggtcgccgaacgaagctgtacgaagcggcc +cattctgatgtccgcgagtctttagggaggttcatccccactatcgggccggtccaggccaccacatgtgag +ctgtatgagctagttgaggccatggtggagaagggccaggacggctctgccgtgtttgagcttgacctctgc +aaccgtgatgtctcgcgtatcacatttttccagaaggattgtaacaaatttacaactggtgagaccatcgcc +cacggtaaggtgggccaaggcatctcggcttggagtaaaaccttttgtgctttattcggcccgtggttccgc +gccattgaaaaggagatcctggctctacttccacctaatatcttctatggtgatgcttacgaggaatcagtg +ttttctgcagccatctctggggctggctccagtatg---gtttttgagaatgacttttctgagtttgatagt +acccaaaacaatttctctct------------------cggccttgagtgcgttattatggaggagtgtggt +atgccccagtggcttgtccgactgtaccacttagttagatcagcctggattctgcaagccccgaaagagtct +ttgaaaggtttctggaagaagcattccggcgagcctggcactctcctttggaacaccgtctggaacatggcg +atcatagcgcactgctatgagttccgtgacttgagagtggcggcgtttaaaggggatgactcggtagttctc +tgcagtgactatcgtcagagccgcaatgcggccactttgatagccggttgtgggttgaaactgaaggttgat +taccggcctgtaggcttgtatgccggcgttgtagtggctccgggtctcggggcacttcctgatgtcgttcgg +tttgcaggccgattatctgagaagaattggggcccgggccccgagcgcgctgaacagttgcgcctagcagtt +tgtgatttcctccgagggttgacgaatgtcgcgcaggtttgtgttgatgttgtgtctcgtg-------ttta +tggggttagccctgggctggtgcataaccttattggaatgctacagactatcgctgatggaaaggcccactt +tactgagaccgtcaagcccgtgttggatcttacaaattctatcatacagaggttggaatgaataacatgtt- +c----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gctgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagtcgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgtctccgatgtcatatcacaatccggggctggagctcgccctc +ggcagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctacccca---------gctggggctgcgccgctaac +tgctgtttcaccggcgcctgacacagccccagtccctgatgttgactctcgcggcgctatcttgcgccgcca +gtataacctgtctacttcccccttaacttcatctgtcgcttctgggactaatcttgttttgtacgccgcccc +gcttaatcctctattgcccctccaggacggcaccaatactcatatcatggcgactgaggcgtctaactatgc +tcagtaccgggttgttcgggctacaatccgctatcgccctttggtgccgaatgctgtcggtggttatgcaat +ttccatctccttttggcctcagactacaaccacacccacctctgttgatatgaattctattacttctacaga +tgtcaggattctagtccaacctggcatagcctctgagctggtcatcccgagtgagcgcctccactaccgtaa +tcaaggttggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggtttggttatgctctg +cattcatggttctcctgtcaattcctataccaatacgccctataccggggcattggggctcctcgattttgc +actcgagcttgaatttagaaacttgacccctgggaacactaacacccgtgtgtcccgctataccagcacagc +ccggcaccgtctgcgtcgtggtgccgatgggacagctgagcttacaactactgcagctacacgttttatgaa +ggacttgcatttca---ctgggacaaat---ggtgtcggcgaagttggccgtggtatagccctaacgctatt +taatcttgctgatacacttctcggtgggctgccgacagaattgatttcgtcggctgggggtcaactgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +agacaagggtattgccataccacatgatatagacttaggggattcccgcgtggtcatacaagactatgataa +ccaacatgagcaggaccggcccaccccgtcgccggccccatctcgccccttttcagtccttcgagctaatga +tgtcctgtggctctc-----------------------------tctgactgcggccgaatatgac------ +cagactacttatggctcgtcgactaatcctatgtatgtgtcagacactgttacatttgt---taatgtggcg +acgggcgcccaggctgttgcccggtcccttgactggtccaaggtcactttagatggccggccgctcactacc +at-----ccagcagtattccaagacattttatgtgc-tgccgcttcgtggcaagctttccttttgggaagct +ggtacgactaaa--gctggctacccttacaattataacactactgctagtgaccagatcttgattgaaaatg +cagccggtcac------cgtgtcgccat-atccacttatactactagtctcgg--------------cgccg +gccctgtgtctgtctc-tgcggtcggcgttctcgccccgcactctgctctagctgtgcttgaagatactata +gact---------accccgcccgtg----ctcatacttttgatgatttctgccctgagtgccgtaatc---t +cggcctgcagggctgtgccttccaatc--------cactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-tcc--att------gt +gccc-cct--------tc-tata-ct-tt----gc-tc-tgta----------------ttc-t-------t +ttt-ttct----gcg---------------ttcccccgccccccg---------------------ggaaaa +aaaaaa----------------taaaaaaatt---------------------------------------- +------------------------------------------ctggggtagc-------------------- +-ggcgggcggggggggcgcaagtcgggggcattttcatagggttaggggaatatttaaatac---------- +----------- +>MW355343.1/17240/1-7240 |Hepeviridae isolate HESQL064, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggtccggccgtttttatctcgtgttcaaattgatattct +tattaacctgatgcaaccccggcagcttgtgttccgacccgaagtcctctggaaccacccgatccagcgagt +tatacataatgagctggagcaata---ctgccgagccc-gcgccggccgctgtcttgaggtgggcgctcacc +cgagatccattaacgataaccccaatgttctgcatcggtgttttctccgtccggttggaagagacgtccagc +gttggtactctgcccccactcgtggtccagcggctaactgccgccgttctgcgctacgtggcttgcctcctg +tcgaccgcacatactgcttcgacgggttctcccgctgcgcctttgccgctgagaccgggatcgctttatact +cactgcatgacctttggccctcggacgttgcggaggctatggcccgccacgggatgacgcgcttgtatgctg +ccctccatcta-ccccctgaggttctgttaccacctggcacttaccacacaacctcctatcttctgatccac +gacggcaatcgtgccgtcgtgacttatgagggggataccagtgcgggctacaaccatgatgtgtccatactt +cgtgcatggatccgcaccactaaaatagttggtgatcacccactggtaatagagagggtccgagccatcggc +tgccattttgtcctactccttactgcagcccccgagccatccccgatgccttatgtcccgtaccctcgttca +acagaggtctatgttaggtccatatttggtcctggc---------gggtcgccttcccttttcccatcagcc +t----------gctctaccaaatcca-catttcatgctgttcctgttcacatctgggaccgacttatgcttt +ttggtgccactctagacgatcaggccttttgctgctcgcggctcatgacttatctccgcgggattagttaca +aagtgaccgttggcgcacttgtcgccaacgagggctggaatgcctcggaagatgcgcttactgctgtgatca +ccgcagcgtacctgactatctgtcaccagcgctatttacgaacacaggccatctccaaaggcatgcgtcggc +tagaggttgagcatgctcaaaaatttatcacgaggttatacagctggttgtttgaaaagtc---------ag +gccgtgactacatccccggccgccagctccagttttatgcacagtgccgccgttggctctcagctggtttcc +atctggatcctagagtccttgtcttcgatgaggcggtcccctgc---cgttgccggagctttttaaagaa-- +----ggctgccgggaagttttgttgttttatgaaatggttggggcagga------gtgcacctgcttcttag +----------------agccagcagaaggcttggttggtgactgtggt--------catgataatgaggcct +atgaggggtctgaggtggaccctgccgagcccgctcaccttgatgtttctgggacttacgcggtccatggcc +gtcagcttgaggctttatatagagcgcttaatatcccagatgacattgcggctcgtgcgtcacgcctgacgg +ccactgtggaacttgccgccagcccgggccgactcgaatgtcgtacggtgcttgggaacaagaccttccgta +catcaataactgatggtgctcacctcgaagccaatggccc------------------------cgagcagt +acgtcttgacatttgatgattcccgccaggcaatgggggctgggccccacagcctcacgtatgaacttgtcc +ccgccggtctgcaggttaaaatatcttct-------aatggcctagactgtaccgctttatttccc---cct +ggcggggcgccaagcgctgcaccaggcgaagtggcggctttttgcagtgccctatacaggtacaataggttc +acccagcgtcattcgttgaccggtgggctgtggctgcaccctgaggggcttcttggcctgttcccccctttc +tctccggggcatgtttgggagtctgcaaaccccttttgcggtgagagcacactttatacacggacttggtct +acatctggtttctctagtgacttctccccgcccgaggcggcttatgccgccccagttcctgtcgt----agg +gctaccctcgggtaccccttcgtctgctagtgatgt-----------------ctgggtgtt---------- +---------tccaccgccc----tctgaggggt--------------cggcgaccgttccgccacccgaaac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtaagccagctaacccacctagt +cccaccccgcctggc-------------------------------------ccccccccctgtaagccacc +tacaccacc--------------------------------------gccggctcgcactcgccggc----- +-------------------ttctttacacatatcctgatggggccaaggtgtatgcaggttctctgtttgag +tctgactgtgattggctggttaatgcatctaaccctggccaccgtcctggcggtggtctctgccatgcgttt +tatcagcgcttcccggagtcgt------tccacccaactgattttgtcatgcgtgaggg---cctcgctgca +tacactttgagcccgcgcccgattattcatgcagtggcccccgattacagggttgagcagaaccctaagagg +ctagaggcggcatatcgtgagacctgctcccgcctcggcacagctgcctacccgctactggggtcggggatc +taccaggtgcctgtaggcctaagcttcgacgcctgggagcgtaaccaccgcccaggcgatgaactttacctt +actgagccagctgccgcc-------------------------------------------------tggtt +tgaggccaataagccaactca--------------------------------------------------- +------------------------------------------gccagccctaacaatcactgaggacactgc +cc------------gcacagccaaccttgccctcgcgattg------------attccgctactgaggtggg +ccgtgcttgc---gctggctgtaccattaaccccgggattgtccattaccagttcaccgccggggtccctgg +ctccgggaagtctaggtctatacagcagggggatgttgatgttgtagtcgtgccaactcgtgagctccgcaa +cagttggcgacgccgtggctttgctgcttttacaccccacacagcagcccgtgttaccgccggtcggcgcgt +ggtgatagatgaggcgccttcgctcccgccgcacttgctgttgctccacatgcagcgagcctcttcggtcca +tcttcttggcgaccccaatcagatccccgccattgattttgagcacgccggtttagtcccagcaattcgccc +cgagcttgccccaactagctggtggcatgttacccatcgttgccccgctgatgtgtgcgagctcatacgtgg +ggcctatccgaagattcagacgaccagccgtgtgctgcgatctctattttggaatgag------cctgcggt +gggtcagaggctagttttcacgcaggcagccaaggcggccaaccccggcgcaatcaccgtccatgaggccca +aggcgccacatttacggagaccaccatcatagccacggccgatgctagaggtcttattcagtcctcccgtgc +gcacgccatcgttgcacttactcgccacacagaaaagtgcgtcattcttgacgcccccggcctactgcgtga +ggtcggcatttctgatataattgttaacaacttt------------------------------ttcctggc +cggtg--gcgaagtgggccaccaccgcccttctaccataccccgcggcaacccggaccagaacttagacat- +-----tctacgagcgttcccgccgtcctgccaaattagtgcctaccaccagctggctgaggagctgggccac +cggccagtcccggtggctgccgtcctgcccccctgccccgagctcgagcaggggctactttacatgccgcag +gagcttacggtgtccgatagcgtcctaatttttgagctcacagacatagttcattgccgtatggccgcccct +agccaacgtaaggcggtcctctcgacgctcgtcggcaggtacggccgccggacgaagctgtatgaagcggcc +cactctgacgttcgtgagtctctagggagattcatccctaccattggaccggttcaggccaccacatgcgag +ctatatgagctagttgaggctatggtggagaagggccaggatggctccgccgtgctcgagctcgacctttgc +agccgtgatgtctcgcgtattacatttttccagaaggactgtaataaatttacaacaggtgagaccattgcc +cacggcaaggtgggccagggcatttcagcttggagtaagaccttttgtgctctatttggcccgtggttccgt +gctatcgagaaggagattttagctctgcttccacccaatattttctacggtgatgcctatgaggagtcagtg +ttttctgcagccatctctggggctggctccagtatg---gtttttgagaacgatttttctgagtttgatagc +acccaaaacaatttttctct------------------tggccttgagtgtgttattatggaagagtgtggc +atgccccagtggcttatccgactatatcatttggttaggtcagcctggactctgcaagccccgaaagagtct +ctgaaaggtttctggaagaagcactctggcgagcccggtactctcctctggaataccgtttggaacatggcg +attatagcacactgttatgaattccgtgacttgagggtagcggcgtttaaaggggatgattcagtggttctt +tgcagtgattaccgccagagccgtaatgcggccactctgatagccggttgcgggttgaaactgaaggttgat +taccggcctataggcttgtatgccggtgttgtagtggccccgggcctcggggcacttcctgatgttgtccgg +tttgccggtcgattatctgagaagaactggggcccgggccccgagcgcgccgaacagctacgcctagcagtt +tgtgatttccttcgagggctgacgaacgttgcgcaggtttgtgttgatgttgtgtctcgcg-------tcta +tggggttagtcccgggctggtacataaccttattggcatgctacagactattgctgatggtaaggcccactt +tactgagactgttaagcctgtacttgatctcacaaattctatcatacagaggttggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------accgccatgtgccctagggctgtttt +gctgctgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccga------ccggccagtcgtctggcc------------gtcgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccaccgacgttgcattacaatccggggctggagctcgctctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgccgtcgatctacccca---------actggggctgcgccgctaac +cgctgtctcaccagcgcctgatactgccccggttcctgatgtcgactctcgtggcgctattctgcgccgcca +gtataatttgtctacttcccctttaacttcatctgtcgcctctggaactaatcttgttttgtatgccgcccc +gctcaacccccttctgcctctccaggacggcactaatactcacatcatggcgactgaagcgtctaattacgc +tcagtaccgggtcgtccgggctacaatccgctatcgccctttggtgccgaatgccgtcggtggttacgcaat +ttccatttccttctggcctcagactacaactacacccacttctgttgatatgaattccataacctcgactga +tgttagaattctagttcagcctggtatagcctctgagctggtcatcccgagtgaacgccttcactatcgcaa +tcaaggttggcgctctgtcgagacatctggcgtggccgaggaggaggcgacatcaggcctggtcatgctttg +cattcatggctcccccgttaattcctataccaacacgccctataccggggcattggggctccttgactttgc +actcgaacttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgttacaccagcacggc +ccgacatcgcctgcgccgtggcgccgacgggacagccgagcttacaaccaccgcagccacacgctttatgaa +ggacctgcacttca---ccgggacaaat---ggtgttggcgaggtaggccgtggcatagccctgacgctatt +taatcttgctgatacccttctcggcggactgccgacagaattgatttcatcggctggaggtcaattgttcta +ctcccgtccggttgtctcagccaatggcgagccgactgttaagttgtacacctctgtcgagaatgcacagca +ggacaagggcattgctataccacacgatatagatctaggggactcccgtgtggtcatccaggattatgataa +ccaacatgaacaggaccggcctaccccgtcgccggccccgtcccgccccttctcagtccttcgagccaatga +tgttctgtggctctc-----------------------------tttaactgcggctgaatatgac------ +cagactacttatggctcgtcgaccaaccccatgtatgtttcggatactgtcacacttgt---taatgtggcg +acaggtgcccaggctgttgcccgttcccttgattggtccaaggtcaccttagatggccgaccactcaccacc +at-----ccagcagtactccaagacattctatgtgc-tgccgctccgtggtaagctttccttttgggaagct +gggacgactaag--gctggttacccctataattataacactactgccagtgaccagattttgattgagaatg +cagccggccac------cgtgttgccat-atctacctacactactagtcttgg--------------agccg +gccctgtgtctgtctc-tgcggtcggcgttcttgctccgcactctgctttagctgtgcttgaagatactatt +gatt---------accccgcccgcg----cccatacttttgatgatttctgccctgagtgccgtaatc---t +cggtttgcagggatgtgctttccagtc--------tactattgctgagctacagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-tct--ttt------gt +gccc-cct--------tc-taaa-ct-tt----gc-tc-ttta--------------atatt-t-------c +ttttttct----gcg-----------------ttctcgctcccga---------------------aaagga +tggtact---------------aaaaaaacg----------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355344.1/17169/1-7169 |Hepeviridae isolate HESQL211, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +agcggctaactccgccttggcgaatgctgtggtggtccggccgtttttatcccgtgttcagactgatatcct +cattaatctgatgcaaccccggcagcttgtattccggcctgaagtcttctggaaccacccgattcagcgagt +catacataacgaattggagcagta---ctgccgggctc-gtgctggtcgttgtcttgaagttggcgcccatc +cgagatccatcaatgacaaccctaatgttttgcaccggtgctttctccgcccggttggcagagatgtccagc +gctggtattctgcccccacccgtggcccggctgctaactgccgccgctctgcgcttcgtggcctgccccctg +tcgatcgcacatactgctttgatgggttttcccgttgcgcttttgctgctgagaccgggattgctttatatt +cactgcatgacctctggccttcggacgttgcggaggccatggcccgccacggcatgacacgtctgtatgctg +tcctacactta-ccccctgaggtcttgttaccacctggcacttatcacacaacctcctatctcctgatccac +gatggcaatcgtgccgtcgtgacttatgagggagacaccagtgcaggctataaccacgatgtatctatactc +cgagcttggatccgtaccacaaaaatcgtcggtgaccacccactggtgatagagagggtccgtgccatcggc +tgccactttgttttgctccttactgcagcccctgaaccatctcctatgccttatgttccttaccctcgctca +acagaggtgtatgtcaggtccatatttggccctggt---------gggtcaccgtctctcttcccatcagcc +t----------gctccactaaatcta-cattccatgctgtcccggttcatatttgggaccggctcatgcttt +ttggcgccaccctagatgaccaggccttctgttgctcgcggcttatgacctacctccgcgggattagctaca +aagttaccgttggcgcacttgttgccaacgagggttggaatgcttcggaggatgcacttaccgctgtgatca +cagcagcgtatctgacaatttgccatcagcgctacctccgaactcaggccatttctaaaggtatgcgccggc +tagaggtcgagcacgcccaaaagtttattacaaggttatatagctggctatttgagaaatc---------ag +gccgtgattatatccccggccgccagcttcagttctatgcacagtgccgccgttggctctcagctggtttcc +atctggatcctagggtccttgtttttgatgaggcagtcccctgc---cgctgccggagcttcctgaagaa-- +----ggtcgccggtaaattctgttgctttatgaaatggttggggcagga------gtgcacctgttttctgg +----------------agccagcggaaggtctggttggcgactgtggc--------catgacaacgaggcct +atgagggatctgaggtggaccctgccgaacctgctcatcttgacgtttctgggacttatgcggttcatggcc +gtcagcttgaagccctatatagagcgctaaacatcccacacgatatcgcggcccgcgcgtcgcgtctgacgg +ccactgtggagctcgccgccagcccaggccgacttgagtgccgcacggtgctcgggaacaagatcttccgca +catcgataactgacggcgcccatctcgaggccaacggccc------------------------cgagcagt +atgtcctaacatttgatgattctcgccaagcaatgggggcagggtctcacagcctcacatatgaacttgtcc +ctgccggtctgcaggttaaaatatcttcc-------aatggcctggattgtactgcagtatttccc---cct +ggcggagcgccaagcgctccgccaggtgaagtggcggctttttgcagtgctctatacaggtataataggttc +acccagcgccattcgctgaccggtgggctgtggctgcaccctgaggggctccttggtttgttcccccctttc +tcccctgggcatctctgggagtctgcaaacccattctgcggtgagagtacactttatactcgaacttggtct +acatccggtttctctagtgacttctcccctcccgaggcggctctcgccgccatcggccctgacac----tgg +gctgcccccgggtaccccttcttctgctagtgatgt-----------------ctgggtgct---------- +---------cccgccaccc----tctgagaggt--------------cggcggttgttttgccacccgaaac +cctgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctagtaagcctgccaatcctcctagt +cttgttgcacctaag-------------------------------------cctcctgttcgtaagccgcc +tacgccacc--------------------------------------accggcccgcacccgccggc----- +-------------------ttctttatacctaccctgatggggctaaggtgtatgcaggttccctgtttgag +tcagattgtgattggttggttaatgcgtccaaccctggccaccgccctggtggtggcctctgccatgcattt +taccagcgctttccagagtctt------tccacccaactgattttgtcatgcgtgaggg---gctcgctgca +tacactctgagcccgcgccctatcatccatgccgtggctcctgattatagggtcgagcagaacccgaagagg +ttggaggcagcatatcgtgagacttgttctcgcctcggtacagctgcttacccgttgctggggtcggggatc +taccaggtccctgtgggcttgagtttcgacgcctgggagcgtaaccatcgtccaggcgatgagctctacctt +accgagccggctgccgcc-------------------------------------------------tggtt +tgaagctaacaagccaaccca--------------------------------------------------- +------------------------------------------accggctttaacaattactgaggataccgc +cc------------gcacagctaatctcgctcttgagattg------------attcagctaccgaggtggg +tcgcgcttgc---gccggttgtactgttagccccggggtcgtccattaccagtttaccgccggggtccccgg +ctctgggaagtctagatccatacagcagggggatgtcgatgttgtggttgtgccaacccgtgagcttcgcaa +cagctggcggcgtcgtggctttgccgctttcacaccccacactgcagctcgtgttactgctggtcggcgtgt +cgtgatcgatgaagcgccttcgcttccaccgcacttactactactccatatgcaacgagcctcatcggtcca +ccttctcggcgatcctaaccagattcctgccatcgattttgagcacgccggtctggtcccggcgatccgccc +cgagctcgcccctactagttggtggcatgtcactcatcgttgtcctgccgacgtgtgtgagcttatacgcgg +ggcttacccaaagatccagacgactagtcgtgttatgcgatctttattttggaatgaa------tctgcagt +gggtcagaaattggtattcacacaggcagccaaggcggctcaccccggtgcaattactgttcatgaggccca +gggtgctacgtttacagagactactattatagccacggccgatgccagaggccttattcaatcttctcgcgc +acatgccattgtcgcgctcacccgccatacagaaaagtgtgttatccttgacgcccctggtctattgcgtga +ggtcggcatttcggacattattgttaacaacttt------------------------------ttcctggc +cggag--gtgaggtaggtcaccaccgcccttctaccataccccgtggcaacccagaccgcaatttagacac- +-----cctgcaagcgtttcccccttcttgccaaattagtgcctaccatcagttggccgaggagctgggccac +cggccggccccagtggccgccgttttgcccccttgccctgagcttgagcagggcttactctatatgccacag +gaactcacagtgtccgatagtgttttagtttttgagctcacggacatagttcactgccgtatggccgccccc +agtcaacgtaaggcggtcctctcgacgcttgtcggcagatacggccgtcgaacaaagctgtatgaagcagcc +cattccgatgttcgtgagtccttagggagatttatccctaccatcggaccagtccaagccaccacgtgtgaa +ttatatgagctagttgaggccatggtggagaagggtcaggacggttctgctgtgcttgagctcgacctctgt +agccgcgatgtctcgcgtattacatttttccagaaggactgtaataagtttacaataggcgagactatcgcc +catggcaaggtgggccagggtatttcggcttggagcaaaaccttttgtgccctatttggcccgtggttccgt +gctattgagaaggagatcctggctctgctcccgcccaacatcttctacggcgacgcctatgaggagtcggtg +ttttctgcagccatttctggagcgggttccagtatg---gtctttgagaatgatttttctgagtttgatagt +acccaaaataacttctccct------------------tggcctagaatgtgtcatcatggaggagtgtggt +atgccccagtggcttattcgactgtaccatttagttagatcagcctggaccctgcaagccccgaaagagtct +ttgaaaggcttttggaagaagcattccggcgagcctggcactctcctttggaacactgtctggaacatggcg +atcatagcacattgctatgaattccgtgacttgagagtggcagcgtttaagggggacgattcagtggttctt +tgcagtgattaccgtcagagccgtaatgcggccaccctgatagccggctgtggattgaaactgaaggttgat +taccgtcctataggtctgtatgctggtgttgtagtagctccgggcctcggggcactccctgacgttgtccgg +tttgccggtcgactatctgagaagaactggggcccgggccctgaacgcgctgaacagttacgcctagcagtt +tgtgacttcctccgagggttgacgaatgttgcgcaggtttgtgttgacgttgtgtcccgtg-------tcta +tggggttagtcccgggctggtacataaccttattggcatgctgcagacgattgctgatggaaaggcccactt +tactgaaaccgtcaagcccgtactggatctgacaaattctatcatacagaggttggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcctcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcagtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgccgacgttgtatcacaacccggggctggaactcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------gctggggctgcgccgctaac +cgctgtttcaccagcgcctgatacagcccctgtccccgatgtagattctcgtggtgctattctgcgccgcca +atataatctatctacctcccctctgacttcatctgtcgcctctggaactaatcttgtcctatacgctgcccc +gcttaatccccttctgccccttcaagacggcaccaacactcatatcatggcgactgaagcatctaactatgc +tcagtaccgagttgttcgggctacaattcgctaccgccctctggtgccgaatgctgtcggtggctatgcaat +atctatttctttctggccccaaaccacaactacacctacctctgttgatatgaattctatcacttctactga +tgttaggatattagtccagcctggcatagcctctgagttggtcatcccgagtgagcgtcttcactaccgtaa +ccagggctggcgctccgtcgagacctcgggtgtggctgaggaggaggcgacatcaggcttggttatgctttg +tattcatggctctcctgttaactcttatactaacacaccctatactggggcattggggcttcttgattttgc +acttgagcttgagtttagaaatctgactcctgggaacactaacacccgtgtgtcccgctacaccagcacggc +ccgacatcgtctgcgccgtggtgccgatgggactgccgagctaacaactactgcagccacacgttttatgaa +ggacctgcacttca---ccgggacgaat---ggtgttggcgaagtgggtcgtggtatagccctaacgttatt +caatcttgctgacacacttctcggcgggttgccgacagaattgatttcgtcggctggaggtcaactatttta +ctcccgcccagttgtctcagccaatggcgagccgactgtaaagttatatacctccgtcgagaatgcacagca +ggacaagggtattgttataccacatgatatagatttaggggactctcgtgtggttattcaggattatgataa +tcaacatgaacaggataggcctaccccgtcaccggccccgtcccgccccttctcggtcctccgagccaatga +cgtcctgtggctctc-----------------------------cttgactgcagccgaatatgac------ +cagaccacttatggctcgtcgaccaaccccatgtatgtttcagacactgttacatttgt---caatgtggct +acgggtgcccaggctgttgcccgctctcttgattggtccaaggtcactctagatggccggcctcttactacc +at-----ccagcagtactctaagacgttctatgtgt-tgccgcttcgtggcaagctctccttttgggaggct +ggtactactaag--gccggctacccttataactataatacaactgctagtgaccagattttgattgagaatg +cagccggccac------cgtgtagctat-ctctacttacaccactagtcttgg--------------tgctg +gccctgtgtcagtttc-tgcggtcggcgtactcgccccgcactctgctctagctgtgcttgaagacaccatt +gatt---------accctgcccgtg----cccatacttttgatgatttttgccctgagtgccgtaatc---t +tggcttacagggctgtgccttccaatc--------tactatcgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-c-c--ctt------gt +gccc-cct--------tc------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355345.1/17239/1-7239 |Hepeviridae isolate HESQL149, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagctggtttttcgacctgaagtgctctggaatcaccctatccaacgggt +tatccataatgaacttgagcagta---ctgtcgggccc-gggctggtcgttgtttggaggttggggcccacc +caagatccattaatgataacccaaatgttctgcaccgatgctttttacgaccagttgggagagatgttcagc +gctggtactctgcccctacccgtggccctgcggccaactgccgtcgttctgccttgcgtggccttccccccg +ttgatcgtacctattgttttgatggattctcccgctgctcatttgctgcagaaacaggggttgccctctatt +ctctgcatgacctctggccggccgatgttgcggaggctatggcccgacacgggatgacgcgcttgtatgctg +cactacatctt-ccccctgaagtactactaccacctggtacttaccatacaacttcatacctactgattcat +gacggtgatcgcgctgttgtgacctatgaaggtgatactagcgcaggctacaaccatgatgtctccatactt +cgtgcatggatccgcacaactaagatagtcggcgaccatccgctggtgatagagcgtgtgcgggctattggt +tgccattttgtgctgctgctcactgcagcccctgagccgtcaccaatgccttatgtcccatacccccggtcg +acagaggtgtatgtccgctctatattcggccctggc---------gggtccccatccctattcccatcagct +t----------gctctacgaaatcta-catttcacgctgtcccggttcatatttgggaccggctcatgctgt +ttggcgctactctggatgatcaggcgttctgctgttcacggcttatgacctacctccgcgggattagttaca +aggtcactgttggcgcccttgttgctaacgaggggtggaatgcctcggaggacgctcttaccgctgttatta +ctgcagcgtatttgaccatctgccatcagcgttacctccgtactcaagctatatccaagggtatgcgccgac +tggagattgagcatgcccaaaaattcattacaagactctatagttggctgttcgagaagtc---------cg +gccgtgactatatccccggccgccagcttcagttctatgcacagtgccgccgttggttgtcggcgggtttcc +atcttgacccaagggtgctcgtttttgatgagtctgtgccctgc---cgttgtaggacgtttcttaagaa-- +----ggctgtgggcaagttctgctgctttatgaagtggttgggacagga------gtgcacctgctttttgg +----------------aaccagcagagggtctagttggcgaccatggc--------cacgataatgaagctt +atgagggctctgaggtcgatcaggccgagcccgcccatctcgatgtttctgggacttatgccgtccatggcc +accaacttgaggccctgtatagggcgcttaacattccgcatgacatcgctgcccgagcctcccgtttgactg +ccaccgtcgaactcgttgcaggtccagatcgcttggaatgccgcactgtgctcgggaataagactttccgga +cgacggtagttgatggcgcccatcttgaggcgaacggccc------------------------cgagcagt +acgttctgtcatttgacgcctctcgccagtctatgggggccgggccgcatagcctctcctacgagctcactc +ctgctggtctgctggtcaagatttcatct-------aatggcctggactgcactgcaacatttccc---ccg +ggcggggcccctagcgctgatccgggggaggtggcagctttttgcagtgctctttacaggtacaacaggttc +actcagcgccattcgcttataggtggcttgtggctgcatcctgaggggttattgggtatcttcccccctttc +tctcccgggcacctttgggagtccgctaaccctttttgtggggagggaaccttgtacacccggacatggtca +acatctggtttttctagtgacttttccccccctgaggcagccgctgcagcgccggctgctactcc----ggg +gttatgcc---accctacacctcctgttagtggtat-----------------tcgggtgtt---------- +---------accgccacct----tctgaagaat--------------ttcaggctgacacagcgcccgttct +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcccgctcaaccattcagc +cccgctgggccaaag-------------------------------------gctcccgtgcgtaagccacc +aacgccacc--------------------------------------atcctcgcgcacccgccgcc----- +-------------------ttctttacacctatccggatggggcaaaggtgtatgtggggtcactgtttgag +tctgactgtgattggctggttaatgcgtcgaatcccggccatcgtcctggcggcggcctttgccatgccttc +taccaacgctaccccgagtctt------tctactcaactgagttcattatgcgcgacgg---tcttgccgcg +tatactttaactccccggcctattattcatgcagtggcccctgattatagggttgagcataacccaaagagg +cttgaggcagcataccgagagacttgctctcgccgcggtactgctgcctacccactcctcggctcgggcata +taccaggtccccgtcagccttagctttgacgcttgggagcgtaaccaccgccccggggacgagctctaccta +accgacctcgccgctacc-------------------------------------------------tggtt +tgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------gccggccctcacaataactgaggatgcagc +cc------------gcacagccaacctagcactggagatcg------------atgctgctacggaggtcgg +ccgggcttgt---gccggctgtgcagttagtcctggggttgtgcactatcagtttactgctggggtcccagg +ttcggggaagtcacgttctatacagcagggggatgttgacgtagtggtcgttcccactcgggagctccggaa +tagttggcgtcgccggggtttcgcagcttttacacctcatacggcggcccgtgtcaccacgggccgtcgtgt +tgtgattgatgaggccccatccctcccaccgcatttgttgctactacacatgcagcgggcctcgtcggtcca +ccttctcggtgacccaaaccagatccctgctatagacttcgagcatgccggcctggtccctgcaatacgccc +tgagcttgcacccactagttggtggcatgtcacccatcgctgccccgctgacgtgtgcgagcttatacgcgg +ggcttatcccaaaatccaaaccactagccgtgtgctgcggtctttattctggaatgag------cctgccat +cggccagaagttagttttcacccaggctgctaaggctgccaaccccggtgcgatcacagtccacgaggccca +gggtgccactttcacggaaactacaatcatagccacagctgatgccagggggctcatccaatcttcccgagc +tcatgccatagttgcacttacccgccacacagagaagtgcgttatttttgatgcccccggcttgttacgtga +ggttggtatatcggatgtgattgtcaacaatttt------------------------------ttcctcgc +cggcg--gggaggtgggtcaccatcgtccctctgtgatacctcgtggtaatcctgaccagaatctcgcgac- +-----actacaggcctttccaccttcttgccagattagcgcctatcaccagttagctgaggaacttggccac +cgcccagctcccgtcgccgctgtcttgcccccttgccctgaacttgagcagggcttattatatatgcctcag +gagcttacggtgtctgatagcgtgctggtctttgaactcacggatatagtccactgccggatggctgcccct +agccagcggaaggccgtcctatcgacgctcgtgggtaggtacggccgtcggacgaagctgtatgaagcagct +cactctgacgtccgtgagtccctggctagattcatccccaccattgggcctgtccaggctactacgtgtgag +ttatatgagctggttgaggccatggtggagaagggtcaggatggctctgccgtgcttgagctcgacctctgc +aatcgtgatgtatcgcgtatcacatttttccagaaagattgtaataaatttaccacaggggagaccattgcc +catggtaaggtcggccagggcatctcggcttggagtaagaccttctgcgccctgtttggcccatggtttcgt +gctattgaaaaagaaatattagccctgctcccgcctaatatcttctatggcgacgcatacgaggagtctgtg +tttgccgccgctgtgtcggggtcaggttcaagcatg---gtatttgagaatgatttttcagagtttgatagc +acccagaataacttctccct------------------tggcctcgagtgtgtagttatggaggaatgtggc +atgccccagtggctaatccggttgtaccatttggttcggtcggcctggattttacaggcgccgaaggagtct +cttaagggattttggaagaagcattctggtgagcccggcaccctcctctggaacactgtttggaatatggcg +atcatagcacactgctatgaatttcgtgatcttagggttgccgcttttaagggagatgactccgtggtcctc +tgtagcgactaccgtcagagccgcaatgcggcggccctgattgcaggttgtgggcttaaactgaaggttgat +tatcgccctattgggttgtatgctggtgtggtggtggcccctggtctggggacgctacccgatgtggtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggctgagcagttgcgcctagctgtt +tgtgatttccttcgagggttaacgaatgttgcgcaggtatgtgtcgatgttgtatcccgag-------ttta +tggagttagccctgggttggtacataaccttattggcatgttgcaaaccatagctgatggcaaagcccactt +tacagagactgttaaacctgtgcttgacctcacgaactctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgtgccctagggctgttct +gttgctgttcctcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagtcgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtaccgcaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccacgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgccatatcacctgctcccgatacagcccctgtgcctgatgttgattctcgcggcgccatattgcggcgtca +gtacaatttatccacatccccgcttacatcatctgttgcttcgggtactaatctggttctttatgctgcccc +gctaaaccctttgctgccccttcaggatggcactaacactcacatcatggccactgaggcatctaattatgc +ccagtatcgggttgtccgagctacgattcgttacaggccattggtgccaaatgctgtcggcggctatgcaat +atctatctcattttggcctcagaccactactacccccacgtctgttgatatgaactctattacttctactga +tgttaggattctagttcagcccggaattgcttctgaattggtcatccctagtgagcgcctccattatcgcaa +ccagggctggcgctctgtggagacctcgggtgtggctgaagaggaggctacttctggtttggtaatgctttg +tatccatggctctcctgttaattcctacaccaataccccctatactggggcgcttgggctccttgatttcgc +tttagagcttgagtttaggaacctgacacccgggaacactaacacccgtgtgtctcggtatacaagcacagc +ccgtcatcggctgcgccgcggtgctgatggcaccgcggagcttaccaccacagcggccacgcgcttcatgaa +ggacttgcacttta---ccggtacgaac---ggggtcggcgaggtgggtcgcggtattgcccttacactctt +taatcttgctgacacgcttctcggtggtctgccgacagaattaatttcgtcggctgggggacagttattcta +ctcccgccccgtcgtctcagccaatggcgagccgactgtcaagttatatacatctgtagagaatgcgcagca +ggataaagggatcgctattccacatgacatagatttgggtgactcccgtgtggtcatccaggactatgataa +ccagcatgagcaggatcgacccaccccctcgcctgccccttctcgccctttttcggttcttcgcgctaatga +tgttttatggctttc-----------------------------tcttactgctgccgagtatgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctcggatactgttacatttgt---caacgtagct +acaggagcccaagctgtcgcccgttctctcgactggtctaaagttactttggacggccgccctctcactact +at-----ccagcagtactccaaaacattttatgttc-tcccgcttcgcgggaagttatctttttgggaggcc +gggacgactaag--gccggttacccctataattacaacacaactgctagtgatcagattctgattgaaaatg +cggctggtcat------cgtgttgctat-ttccacgtataccaccagcttggg--------------tgctg +gccctggggctggttc-cccaattggggttttaaccccccattccggttctggagtccttggaaaaactaat +gaat---------acccttgccgtg----cccccacttttgaagaattttggccgggatggcccgctc---t +tgggttggcggggtgtggtttccagtc--------taccaatggtgaacttccgcgtcc------------- +--------taaaatggaggtaaggaaaacccgggagttttaattaa-tt----t--cctt---t------gg +gccc-cct--------cc-atat-cccct----gc-tt---t----------------aact-c-------a +tatttccg----gc----------------ggtccgccccccccg---------------------gaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------aaaaa------------------------- +------------------------------------------------------------------------ +----------- +>MW355348.1/17284/1-7284 |Hepeviridae isolate HESQL161, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggttcggccgtttttatcccgtgttcagactgagattct +tattaacctgatgcaaccccgccagcttgtgtttcggcctgaagtcctctggaaccatccgatccagcgagt +tatacataacgagctggaacaata---ctgtcgagccc-gcgctggccgctgtcttgaggtgggcgctcacc +caaggtccatcaatgataatcctaatgtcctccaccggtgctttctccgcccagttggaagagacgtccagc +gttggtattccgcccccactcgcggcccagcagctaactgccgacgttctgcattacgtggtttgccccctg +ttgaccgcacatactgtttcgacgggttctcccgctgcgctttcgctgctgagaccggaatcgctctatact +cactgcatgacctttggccctcggatgttgcggaggctatggcccgccacgggatgacgcgcttgtatgctg +ccctccatcta-ccccctgaggttctgctaccgcctggcacataccacacaacttcctatcttttgattcac +gacggcaatcgtgccgtcgtgacttatgagggggataccagtgcaggctataaccacgatgtgtctatactt +cgtgcatggattcgtaccactaaaatagttggtgaccacccactggtaatagagagggtccgcgccatcggc +tgccattttgttttactccttactgcagcccctgagccgtccccaatgccatatgtcccgtaccctcgctca +acagaggtgtatgttagatctatatttggccccggc---------ggatcaccttctctctttccatcagcc +t----------gctccaccaagtcta-cattccatgctgtcccggtccacatctgggaccggcttatgcttt +ttggtgccactctagatgatcaggccttttgctgctcgcggcttatgacctacctccgcgggattagctaca +aagtgaccgtcggcgcacttgtcgccaatgaaggctggaatgcctctgaggatgcgcttaccgctgtgatta +ctgcagcgtacctgaccatctgtcaccagcgctacttacgaacacaggctatttctaaaggcatgcgccggc +tcgaggttgagcacgcccaaaagtttatcacaaggctatatagctggctgttcgaaaagtc---------ag +gccgtgattacatccccggccgccagctccagttttatgcgcagtgccgccgttggctttcagcaggcttcc +atctggaccctagagttcttgttttcgatgaggcggtcccctgc---cgctgccggagcttcctaaagaa-- +----ggttgccgggaagttctgttgttttatgaaatggttggggcagga------gtgtacctgctttctgg +----------------agccagcagaaggcctggttggtgattgtggc--------catgataatgaggcct +atgaagggtctgaggtggaccctgccgagcctgtccaccttgatgtttccgggacttacgctgtccacggtc +gtcagcttgaggctctatatagggcacttaatatcccagatgacattgcggctcgcgcgtcacgcttgacag +ctactgtggagctcgccgctggcccaggccgacttgagtgccggacggtgcttgggaataagacttttcgta +catcgataactgacggtgcccatctcgaggccaacggccc------------------------cgagcagt +atgtcttgacatttgatgactcacgccaggcaatgggggccggcccctacagcctcacatatgagcttgtcc +ctgctggcctgcaggttagaatgtctgct-------aatggcttggattgtaccgctatattcccc---cct +ggtggggcgccaagcgctgcaccaagtgaagtggcggcgttttgtagtgccctatataggtacaataagttc +acccagcgccattcgctgactggtggtttgtggctgcaccctgaggggcttcttggcttgtttcctcctttc +tccccagggcacctctgggagtctgcaaaccccttttgcggtgagagtacactatatacacgaacttggtct +acatctggcttttctagcaacttttctccacctgaggcggcccatgccgccccagttcctgacat----agg +gccaccctcgggtgtcccctcgtctgctagtgacat-----------------ctgggtgtt---------- +---------cccaccgccc----tctgagaggt--------------cagcgaccgtcccatcacccgtcac +cccggtcagtaagccgactaa---------------------------------------tccgcc------ +------------------------------------------------------------------------ +-tagtcttac-------------------------------------------------------------- +-------------tgcaccc----aggccccccgtctgtgagccgcctacattatcaccggccctagccccg +g---------------------------------------------tcagtgagccagccaacctgcctagc +cttgctacacccacg-------------------------------------cctcctgcccgcgagccccc +cacgccatc--------------------------------------accagcccgcacccgtcggc----- +-------------------tcctttatacgtaccctgatggggccaaggtatacgcgggctctttgtttgag +tctgattgtgactggctggttaatgcatctaaccctggccaccgccctggtggtggcctttgccatgcattt +tatcagcgtttcccagagtcat------tttatccaactgacttcgttatgcgtgaggg---tctcgccgca +tacactttgagcccgcgtccgatcattcatgctgtggcccccgactacagggttgagcagaatcctaagagg +ctagaggcggcgtatcgtgagacctgctctcgcctcggtacagctgcctaccctttactggggtcagggatt +taccgggtccctgtaggtttgagcttcgacgcctgggagcgtaaccaccgcccgggtgatgaactctacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------accagccctaacaattactgaagataccgc +cc------------gcacggctaaccttgcgcttgagattg------------actctgctactgaggtggg +ccgtgcttgc---gctggctgcactattaaccccgggattgttcattatcagttcaccgccggggttcctgg +ctctgggaagtctaagtctatacagcagggggatgttgatgttgtggtcgttccaactcgtgagcttcgtaa +cagttggcggcgccgcggatttgctgcttttacccctcatacagcagcccgtgttactgctggtcggcgtgt +agtgatagatgaggcaccatcgcttccaccgcacctgctgttgcttcatatgcaacgagcctcatcggtcca +tcttcttggtgaccccaaccagatccctgccatcgacttcgagcacgccggtttagtcccagcgattcgccc +tgaactagcccctactagttggtggcatgtcacccaccgctgccccgctgatgtgtgtgagctcatacgcgg +ggcttacccaaagattcagacgaccagccgtgtgttgagatcattattttggaatgag------cctgcggt +gggtcagaggctggttttcacgcaggcagccaaggcggctaatcccggcgcgatcaccgtccatgaggccca +gggtgcaacgttcactgaaacaaccatcatagccacggccgacgctagaggccttattcagtcctcccgtgc +acatgctattgttgcacttactcgccatactgaaaaatgcgtcatccttgacgctcctggcctattgcgtga +ggtaggcatctccgacataatcgttaacaacttt------------------------------ttcttggc +tggcg--gtgaagtgggccatcaccgaccttctattataccccgcggcaacccagaccagaatttagatac- +-----cctacgagcattcccgccgtcctgccaaattagtgcctaccaccaattagctgaggagctgggccac +cggccggccccagtggccgctgttctgcccccatgccccgagcttgagcagggtttactctacatgccgcag +gagctcacggtgtccgatagtgtcctaacttttgaactcacggacatagttcactgtcgtatggctgccccc +agccagcgtaaggcggtcctttctacgctcgtcggcaggtatggccgccgaacgaaactgtatgaagcagcc +cattctgacgttcgcgagtctttaggaaggttcatccctactatcgggccagtccaggccaccacatgtgag +ctttatgagctggttgaggccatggtggagaagggccaggacggctctgccgtgcttgagctagacctctgc +agccgtgatgtctcgcgcatcacattcttccagaaggattgtaataaatttacaacaggtgagaccattgct +cacggcaaggtgggccagggtatttcggcctggagtaaaaccttctgcgctttattcggcccgtggttccgt +gccattgagaaggagattctggctttgctcccacccaacattttctacggtgatgcctatgaggagtcagtg +ttttccgcagccatttccggtgctggctccagtatg---gtttttgagaacgatttttctgagtttgatagc +acccaaaacaatttttccct------------------tggccttgagtgcgtcatcatggaggagtgtggc +atgccccagtggcttatccgactgtaccacttagttagatcagcctggaccctgcaagccccgaaagagtct +ttgaagggcttctggaagaagcattccggcgagcctggcaccctcctttggaacaccgtctggaacatggca +attatagcacattgctatgaattccgtgacctgagagtggcagcgtttaaaggggatgattcagtggttctt +tgcagtgattaccgccagagccgcaatgcggctactctgatagccggttgtggattgaaattgaaggttgat +taccggcctataggtttgtatgctggtgttgtggtggccccgggcctcggggcactccctgatgttgtccgg +tttgccggccgactatctgagaagaactggggcccgagtcctgagcgcgccgaacagctgcgcttagcagtc +tgcgatttccttcgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +cggggttagccccgggctggttcataaccttattggtatgctacagactattgctgacggcaaggcccattt +tactgagactgttaaacctgtgctggatcttacaaattctatcacacagaggttggaatgaataacatgtt- +c----------------tgtgcattgcccatggg------------accgccatgcgccctagggctgttct +gttgctgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtttcacaatccgggactggagctcgccctc +gacagccgtcccg---------------cccccttggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgccgccccccgtcgtcgatctgcccca---------gctggggctgcgccgttaac +tgctgtttcaccagcacctgacacggccccggtccctgatgttgactctcgtggcgctatcttacgccgcca +gtataatttatccacctcccctttaacctcatctgttgcttctgggactaatcttgtcttgtacgctgctcc +gcttaatcctctcttgcctctccaagacggcaccaatactcacatcatggcgactgaggcgtctaattacgc +ccagtaccgggttgtccgggctacaatccgttatcgccctctggtgccaaatgctgtcggtggttatgcaat +ttctatctccttctggcctcagactacaactacacccacctctgttgatatgaattctattacttccactga +tgttaggattttagtccagcccggcatagcctctgagctggtcatcccgagtgagcgccttcactatcgtaa +ccaaggctggcgctctgttgagacatcgggcgtggccgaggaggaggcaacatcgggcttggtcatgctttg +cattcatggttcccctgttaattcctataccaacacgccctatactggggcgttggggcttctcgactttgc +acttgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgttatactagtacagc +ccggcaccgcctgcgtcgtggtgccgatggtacagctgagcttacaaccactgcagccacacgttttatgaa +ggacttgcacttca---ccgggacaaat---ggtgttggtgaggtgggccgtggtatagccctaacgctgtt +taatcttgctgatacacttctcggtgggctgccgacagaattgatttcgtcggctggaggtcaattgttcta +ctcccgcccggttgtctcagccaatggcgagccaactgttaagttatatacctctgtcgagaatgcacagca +ggacaagggcattgccataccacacgatatagatttaggggattctcgtgtggttatacaagactatgacaa +ccaacatgaacaagaccgtcctaccccatcgccggccccgtcccgccccttttcggtccttcgagccaatga +tgttctgtggctctc-----------------------------cctgactgcagctgaatatgac------ +cagactacttatggctcgtcgaccaaccctatgtatgtttcagataccgtcacacttgt---taatgtggcg +acgggtgctcaggctgtagcccgatccctcgattggtccaaggtcaccttggacggccggccgctcactacc +at-----ccagcagtattccaagacattttatgtgc-tgccgcttcgtggcaagctttccttttgggaagct +ggtacggctaag--gccggctacccctataattataacactactgctagtgaccagattttgattgagaatg +cagccggccat------cgtgttgctat-ttctacttacactactagccttgg--------------tgctg +gtcctgtgtccgtttc-tgcagttggtgttctcgccccgcattccgttttagctgtgcttgaagacactatt +gact---------acccagcccgtg----cccatacttttgatgacttttgccctgagtgccgcaatc---t +cggcctgcagggctgtgcttttcagtc--------caccatcgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----tc-cat--ctt------gt +gccc-cct--------tc-taaa-ct-tt----gc-tc-tgt----------------tatt-t-------c +ttttt------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355352.1/17293/1-7293 |Hepeviridae isolate HESQL144, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattctgccttggcgaatgctgtggtggttcggccgtttttatcccgtgttcaaactgatatcct +tattaatctgatgcaaccccggcagcttgtgttccgacctgaagtcctctggaaccatccgattcagcgagt +catacataatgagttggagcagta---ctgccgagccc-gcgctggccgctgtcttgaggtgggcgcccacc +caagatctattaatgataaccccaacgttctgcaccggtgcttcctccgcccggtcgggagagacgtccagc +gctggtattctgcccctactcgtggtccagcggccaattgccgccgttctgcgctgcgcggtttgccccctg +tcgatcgcacatactgcttcgacgggttctcccgttgcgcctttgccgctgagaccggcatcgctttatact +cactgcatgacctttggccctcggacgttgcggaggctatggcccgtcacgggatgacacgtttgtacgccg +ccctccaccta-ccccctgaggtcctgttaccacctggcacttatcacacaacctcctatcttctcattcac +gacggcaaccgtgccgtcgtcacttatgaaggggacaccagtgcaggttataaccacgatgtgtctatactt +cgtgcatggattcgcaccactaaaatagtcggtgatcacccactggtaatagagagggtccgcgccattggt +tgccacttcgttttactccttactgcagcccccgagccatccccaatgccttatgtcccgtaccctcgttca +acagaggtgtatgttaggtccatatttggtccaggt---------gggtcaccttcccttttcccatcagcc +t----------gctccaccaaatcta-cattccacgctgtcccggttcatatttgggaccggctcatgcttt +ttggtgccaccttagatgaccaggccttttgttgctcaaggcttatgacttacctccgtgggattagctata +aagtgaccgttggcgcactcgtcgccaacgagggctggaatgcctcggaggatgcactcaccgctgtgatta +ctgcagcgtacctgaccatctgccatcagcgctacctgcggacccaggccatttccaaaggtatgcgccggc +tagaggttgagcatgcccaaaagtttatcacaaggttgtacagctggctgtttgaaaagtc---------ag +gccgtgattatatccccggtcgtcagctccagttttatgcacagtgccgccgttggctttcggctggcttcc +atcttgaccctagagttcttgtcttcgacgaggcggtcccctgc---cgctgccggagcttcttaaagaa-- +----ggttgccggaaaattctgctgttttatgaaatggctggggcagga------atgtacttgctttctgg +----------------agcctgcagagggtctggttggtgactgtggc--------catgataatgaggcct +acgaagggtctgaagtggaccccgccgagcctgctcaccttgatgtttccgggacctatgcggtccacggtc +gccagcttgaggctctatatagagcgcttaacatcccggatgacattgtggctcgtgcgtctcgtctgacgg +ctactgtggaacttgccgccagcccaggccgcctcgagtgccgtacggtgcttggaaataagacctttcgta +catcaataattgatggtgcccaccttgaagccaacggccc------------------------cgagcagt +atgttctgacttttgatgactctcgccaggcaatgggggctgggtctcacagcctcacgtacgaacttgtcc +ctgccggtttgcaagttaaaatatcttcc-------aatggcttggattgtaccgctatattcccc---tct +ggcggagcgccgagtgctgcaccaggtgaggtggcagctttctgcagcgccttatataggtacaataggttt +acccagcgtcattcgctgaccggtggactgtggctgcaccctgaagggcttcttggcctgttcccccctttc +tccccggggcatcaatgggagtctgcaaaccccttttgcggtgagagtacactttatacacgaacttggtct +acatctggtttttcaagtgacttttccccacccgaggcggcttacgccgccccagcccctgacat----agg +gctaccctcgggtgccccctcatctgttagtgatgt-----------------ctgggtgtt---------- +---------tcccccgccc----tctgaggggt--------------cggtggttgccccgctgcccgaaac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtaagccagctaacctgcctagt +tgtactacgcctagg-------------------------------------ccccccgtttgtaagccgcc +tacaccacc--------------------------------------accggcccgcacccgccggc----- +-------------------tcctttacacatatcctgacggggccaaggtgtatgcaggctccttgtttgaa +tcagattgtgattggctggttaatgcatctaaccctggtcaccgccctggcggtggtctttgccatgcattt +taccagcgcttcccggagtcgt------tccacccgactgattttgttatgcgtgaagg---tcttgccgca +tatactttgagcccgcgtcctattattcatgctgtcgcccccgactacagagttgagcagaaccccaagagg +ctagaggcggcatatcgtgagacctgttcccgcctcggcactgctgcctatccgctactgggatcggggatt +taccaggtccctgtaagcttgagcttcgacgcctgggagcgtaaccaccgcccgggcgatgaactttaccta +actgagccagccgccgcc-------------------------------------------------tggtt +cgaggtcaataagccaacccg--------------------------------------------------- +------------------------------------------gccagctctaacaatcactgaggacaccgc +cc------------gcgcggctaaccttgcgcttgagattg------------attccgctactgaggtggg +ccgcgcttgt---gcaggttgcactatcaaccccgggattgtctattaccagtttaccgccggggttcctgg +ctccgggaaatctaggtctatacagcagggggatgttgatgttgttgttgtgccaactcgtgagcttcgcaa +cagttggcgacgccgtggctttgccgcttttacacctcacacggcagctcgtgttactgccggtcggcgtgt +ggtgatagacgaggcaccctcgcttccaccgcatttgctgctgcttcatatgcagcgagcctcgtcggctca +tctccttggtgaccccaaccagatccctgctattgactttgagcacgccggtttggtcccagcgatccgccc +tgagcttgcccccaccagttggtggcacgttacccatcgctgccctgccgatgtgtgcgagctcatacgcgg +ggcttatccaaagatccagaccactagccgtgtgctgcgatccctattctggaatgag------cccgcggt +gggtcagaagctggttttcacgcaggcagctaaggcggctaaccccggtgcaattactgttcatgaggccca +gggcgccacgtttacggagaccaccatcatagctacagccgatgctagaggtcttatccaatcctctcgtgc +acatgctattgttgcacttactcgccatacagagaaatgcgtcatacttgacgcccctggccttttgcgtga +ggtcggcatttctgatataattgtcaacaacttt------------------------------ttcctggc +tggtg--gtgaagttggccaccatcgcccttccaccataccccgcggcaatccagaccagaacttagacac- +-----cttacgagcgttccctccgtcctgccaaattagcgcctaccaccagctggctgaggagttgggccac +cggccggccccagtggccgccgttctacctccctgccctgagcttgagcaggggctactctatatgccgcag +gagctaacggtgtccgatagcgtcctagtttttgaactcacggacattgttcactgccgtatggctgccccc +agtcagcgtaaggcggtactttcgacgctcgtcggtaggtatggccgccgaacgaagttgtatgaggcggct +cactccgatgttcgtgagtccttaggaaggttcatccctactatcggacctgtccaggccaccacgtgtgag +ctatacgagctggttgaggctatggtggagaagggccaggacggctccgccgtgctcgagcttgacctctgc +agccgtgatgtctcgcgtattacattcttccagaaggattgtaataaatttacaacaggtgagactatcgcc +catggcaaggtgggccagggcatttcggcctggagcaaaaccttctgcgctttattcggcccgtggttccgc +gctattgagaaggagatcttagccctgctcccacccaatattttttatggcgacgcctatgaggagtcagtg +ttttctgcagctatctctggagctggttccagcatg---gtttttgagaacgatttttctgaatttgatagc +acccaaaataatttttctct------------------tggccttgagtgcgtcattatggaggagtgtggt +atgcctcagtggcttatccgactgtatcatttggtccgatcagcctggactctgcaggccccgaaagagtct +ttgaagggtttttggaagaagcattccggcgagcctggcactcttctttggaacaccgtctggaacatggcg +atcatagcgcactgctatgaattccgtgacttgagagtggcagcgtttaagggggatgattcggtggttctc +tgtagcgactaccgccagagccgtaatgcagccaccctgatagccggttgtgggttgaagctgaaggttgat +tatcgccctataggtttgtatgccggcgttgttgtggctccgggcctcggtgcacttcctgatgtcgtccgg +tttgccggtcgcttatctgagaagaactggggcccgggccccgagcgtgccgaacagttacgcctagcggtt +tgtgatttcctccgagggcttacgaatgttgcgcaggtttgtgttgatgttgtatcccgtg-------ttta +tggggttagccccggattggtgcataaccttattggcatgctacagactattgctgatggcaaggcccactt +tactgagaccgtcaagcctgtacttgatcttacaaattctatcatacagaggttggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgtgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaacccggggttggagctcgccttc +gacagccggcccg---------------ccccctcggctcctcctggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgccgtcgatctacccca---------gctggggctgcgccgctaac +tgctgtttcacctgcgcctgatacggccccagttcctgatgttgactctcgcggcgccatcttgcgccgtca +gtataatctgtctacctcccctctaacctcatctgttgcttctgggactaaccttgtcttgtatgccgctcc +gcttaatcctcttttgcctctccaagacggcactaatactcacatcatggcgactgaggcgtctaattacgc +ccagtatcgggttgtccgggctacaatccgttatcgccctttggtgccgaacgccgtcggtggttatgcaat +ttccatttccttttggcctcagactacaactacacccacctccgttgatatgaattccattacctctactga +tgttaggattctagtccagcctggcatagcttctgaactggtcatccccagtgagcgccttcactatcgtaa +tcagggctggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatctggcttggtcatgctttg +tattcacggttcccctgttaattcctataccaacacgccctacactggggcattggggcttctcgactttgc +actcgagcttgaatttagaaatctaacccctgggaacactaacacccgtgtgtcccgttatactagcacagc +ccgacaccgtctgcgtcgcggtgccgatggcacagccgagcttacaaccactgcagccacacgttttatgaa +ggacttgcatttca---ccgggacaaat---ggtgtcggtgaggtaggccgtggcatagccctaacgttatt +taatcttgctgacacacttctcggcgggctgccgacagaattgatttcgtcggctggaggccaactgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggcattgccataccacacgatatagatttaggggattcccgtgtggttatacaagactatgacaa +ccaacacgaacaggaccggcctaccccgtccccagccccgtcccgccctttctcagtccttcgagtcaatga +tgttttgtggctctc-----------------------------tctaaccgcggctgaatatgat------ +cagactacttatggctcttcaaccaaccccatgtatgtctctgatactgtcacatttgt---taatgtggcg +acaggtgcccaggctgtagcccgatcccttgattggtccaaggtcactctggatggccgtccactcaccacc +at-----ccagcagtactctaagacattttatgtgt-tgccgcttcgcggcaagctgtccttttgggaagct +ggcacgactaaa--gctggctacccctataactataatacaactgctagtgaccagattttgattgagaatg +cggccggccac------cgtgttgctat-atctacttatactactagtcttgg--------------cgccg +gccctgtgtctgtttc-cgcggtcggcgttcttgccccgcattctgctttagctatgcttgaagatactatt +gatt---------atcctgcccgtg----cccatacttttgatgatttctgccctgagtgccgcaatc---t +cggtttgcagggctgcgcttttcagtc--------tactattgctgagcttcagcgcct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattat-tc----c--cccc-ttt------gt +accc-cttctagtttgtc-tgta-tt-ct----tt-tt-tctgcgtccgtccgagaaaaact-c-------c +tgctctcctgcagcgcacttgtgtatatctctggctcgtccatcg---------------------ggggcc +aaatagtacc--gaggttggttagcagc-------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355354.1/17177/1-7177 |Hepeviridae isolate HESQL164, complete genome +------------------------------------------g-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggtccggccgtttttatcccgtgtccagactgatatcct +tatcaatctgatgcaaccccggcagcttgtgttccgacctgaagtcctctggaaccacccgattcagcgagt +catacataatgagttggagcaata---ctgccgagccc-gcgctggccgctgtcttgaggtgggcgcccacc +caagatctattaatgataaccctaacgttctgcaccggtgctttctccgtccggtcgggagagacgtccagc +gctggtattctgcccctactcgcggtccagcagccaattgccgccgttctgcgctacgcggtttaccccctg +tcgaccgcacatactgcttcgacgggttttcccgctgcgctttcgccgccgaaaccgggattgccttatact +cactgcatgacctttggccctcggacgttgcggaggctatggcccgccacgggatgacgcgcttgtatgctg +ccctccaccta-ccccctgaggtcctgttaccacctggcacttatcacacaacctcctatcttttgattcac +gacggcaatcgtgccgtcgtgacttatgagggggacactagtgcgggctacaaccacgatgtgtctatactt +cgtgcatgggtccgcactactaaaatagttggtgatcacccgctggtaatagagagggttcgcgccataggc +tgccattttgttctacttcttactgcagcccccgagccatccccgatgccttatgttccgtaccctcgttca +acagaggtgtatgttagatccatctttggccctggt---------gggtcgccttctctttttccgtcagcc +t----------gctctaccaagtcta-cattccatgctgttccggttcatatttgggaccggctcatgcttt +ttggtgccactctagatgaccaggccttctgctgctcgcggcttatgacctatcttcgcgggattagctata +aagtgactgttggcgcacttgtcgccaatgagggctggaatgcctcggaggatgcgcttaccgctgtgatta +ctgcagcgtacctgactatctgtcatcagcgctacctacggacgcaggccatttccaaaggtatgcgccggt +tagaggttgagcatgcccagaagtttatcacaaggctatacagttggctgtttgaaaagtc---------gg +gccgtgattacatccctggtcgccagcttcagttttacgcacagtgccgccgttggctttcggctggctttc +atctggaccctagagttctcgtcttcgacgaggcggtcccctgc---cgctgtcggagcttcctaaagaa-- +----agccgccggaaaattttgttgtttcatgaaatggttggggcagga------gtgtacttgctttctgg +----------------agccagcagaaggcctaattggtgattgtggc--------catgataatgaggcct +acgaagggtctgaagtggaccccgccgagcctgctcaccttgatgtttccgggacctatgcggtccatggcc +gccagcttgaggctctatatagagcgcttaatatcccggacgacattgtggctcgtgcgtctcgtctaacgg +ctactgtggaacttgccgccagcccgggccgccttgagtgccgtacggtgctcgggaataagacttttcgta +catcaataactgatggtgcccaccttgaagccaacggccc------------------------cgagcagt +atgttttgacatttgatgactctcgccaggcaatgggggccgggcctcacagcctcacatacgaacttgtcc +ctgccggtttgcaagttaaaatatcgtct-------aatggcttggattgtaccgctacattccct---ctt +ggcggggcgccgagcgccgcaccaagtgaggtggcagctttctgcagcgccttatataggtacaataggttt +acccagcgccattcgctaaccggtggactgtggctgcaccccgaggggcttcttggcctgtttcctcctttc +tctccggggcatctatgggagtctgcaaaccccttctgcggcgagcgtacactttatacacgaacttggtct +acatctggtttttcaagcgacttctccccacctgaggcggctcacgccgtcccagcccttgacat----agg +gctaccttcgggtgccccctcgtctgtcggtgatgt-----------------ctgggcgtt---------- +---------cccaccgccc----tctgaggggt--------------cgacggtcgcctcattgcctggaac +ttcgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtaagccagctaactcgcccagt +tgcactacacctagg-------------------------------------ccccctgttcgtaagccgcc +tacaccacc--------------------------------------accggcccgcactcgccggc----- +-------------------tcctttatacatactctgacggggccaaggtgtatgtaggctctttgtttgaa +tcaaattgtgactggctggttaatgcatctaaccctggccaccgccccggcggtggcctttgccatgcattc +taccagcgtttcccggagtcgt------tccatccggctgattttgtcatgcgtgaagg---tctcgccgca +tacactttgagcccgcgtccgattattcatgccgtcgcccccgattatagagttgagcagaaccccaagagg +ctagaggcggcatatcgtgagacttgttcccgcctcggcacagctgcctacccgttactagggtcggggatt +taccaggtccctgtaggcttaagtttcgacgcctgggagcgtaaccaccgcccaggcgatgaactttatctg +actgagccagctgccgcc-------------------------------------------------tggtt +cgaagccaataagccaaccca--------------------------------------------------- +------------------------------------------gccagctctaacaattactgaggacaccgc +cc------------gcacagctaaccttgcgcttgagattg------------actctattactgaggtggg +tcgtgcttgc---gcaggctgcactattaatcccgggattgttcattaccagtttaccgccggggttcctgg +ctccgggaagtctaggtctatacagcaaggggatgtcgatgttgtggttgtgccaactcgtgagcttcgtaa +cagttggcggcgccgcggctttgctgcttttacacctcatacagcagcccgtgttaccgccggccggcgtgt +ggtgatagatgaggcaccttcgcttccaccgcatttgctgctgcttcatatgcagcgagcctcatcggtcca +tctccttggtgaccccaatcagatccctgctattgactttgagcacgccggtttggtcccagcgatccgccc +tgagcttgcccccaccagttggtggcatgttacccatcgctgccccgccgatgtgtgcgagctcatacgcgg +ggcttatccaaagattcagacgaccagccgtgtgctgcgatctttattctggaatgag------cccgcggt +gggtcagaagctggttttcacgcaggcagccaaggcggctaaccctggtgcaatcaccgttcatgaggccca +gggtgccacgtttacggagactaccattatagccacagctgatgctagaggtcttatccaatcctcccgtgc +acacgccatcgttgcactcactcgccacacagaaaagtgcgtcattctcgacgcccctggccttttgcgtga +ggtcggcatttctgatataattgttaataacttt------------------------------ttcctggc +tggtg--gtgaggtgggccaccatcgcccttctgctataccccgcggcaatccagatctgaacctagacac- +-----cctacgagcgttccccccgtcctgccaaattagtgcctaccaccagttggctgaggagttgggccac +cggccggccccagtggccgccgttctacctccctgtcctgagcttgagcaggggctactctacatgccgcag +gagcttacggtgtccgatagcgtcctaatctttgaactcacggacatagttcattgtcgtatggctgccccc +agtcagcgtaaggcggtactttcgacgcttgttggtaggtacggccgccgaacgaagttgtatgaggcggcc +cattctgatgttcgcgagtctctaggaaggttcatccccgctatcgggcccgtacaggccactacgtgtgaa +ctatacgagctggttgaggctatggtggagaagggccaggacggctccgccgtgctcgagcttgacctctgc +agccgtgatgtctcgcgcatcacattcttccagaaagattgcaataaatttacaacaggtgaaactattgcc +catggcaaggtgggccagggcatttcggcctggagcaaaaccttctgcgccttattcggcccgtggttccgc +gccattgagaaggagattctggctctgctcccacctaatattttctatggcgatgcctatgaggagtcagtg +ttctctgcagccatttctggggccggctccagcatg---gtttttgagaacgatttttctgagtttgatagc +acccaaaacaatttttctct------------------tggccttgagtgcgtcatcatggaggagtgcggc +atgccccagtggcttatccgattgtatcacttggttcgatcagcctggactctgcaagccccgaaagagtct +ttgaaaggtttctggaagaagcattccggcgagcctggcactctcctttggaacaccgtctggaacatggcg +atcatagcacactgctatgaattccgtgacttgagagtggcagcgtttaagggggatgattcggtggttctt +tgcagtgattaccgccagagtcgtaatgcagccaccctgatagccggctgtgggttgaaattgaaggttgat +taccgccctataggtttgtatgcaggtgttgttgtggccccgggcctcggtgcactccctgatgttgtccgg +tttgccggtcgattatctgagaagaattggggcccgggccccgagcgcgccgaacagttgcgcctagcggtt +tgtgactttcttcgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttatcggcatgctacagactattgctgacggaaaggcccactt +tactgagactgtcaaacctgtactcgacctcacaaattctatcatacagaggttagaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgtcatgcgccctagggctgttct +gttgctgctcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccag------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaatccggggctggagctcgccctc +ggcagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctgcccca---------gctggggctgcgccgttaac +tgccgtttcaccagcgcctgatacggccccagtccctgatgtagactctcgtggcgccatcctgcgccgcca +gtataatttgtccacttcccctctaacctcatctgttgcttctgggactaaccttgtcttgtatgccgcccc +acttaaccctcttctgcctctccaggacggcactaatactcacatcatggcaaccgaggcgtccaattacgc +ccagtaccgggttgtccgggctacaatccgttatcgccctttggtgccgaatgccgtcggcggttatgcaat +ttctatttccttttggcctcagaccacaaccacacccacctccgttgatatgaattctattacctctactga +tgttaggattttagtccagcctggcatagcctctgaactggtcatccccagtgagcgccttcattatcgtaa +tcaaggctggcgctctgttgaaacatcgggtgtagccgaggaggaagcgacatctggcttggtcatgctctg +cattcatggttcccctgttaattcctacaccaacacgccctataccggggcattggggcttcttgactttgc +acttgagcttgaatttagaaatctgacccccggaaacactaatacccgtgtgtcccgctacaccagcacagc +ccgacaccgtctgcgccgcggtgccgatgggacggccgagcttacaaccactgcagccacacgctttatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggtgaggtgggccgtggcatagccctaacgttatt +taaccttgctgacacacttcttggcgggctgccgacagaattgatttcgtcggctgggggccagttgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgttaaattatacacctctgtcgagaatgcgcagca +ggacaagggtattgccataccacacgatatagatttaggggactcccgtgtggttatacaagactatgacaa +ccaacatgaacaggaccggcctaccccatcaccggccccgtcccgccctttttcagtccttcgagccaatga +tgtcctgtggctttc-----------------------------tctgaccgcggccgaatatgat------ +cagactacttatggctcctcaaccaaccccatgtatgtttccgatactgtcacatttgt---taacgtggcg +actggtgcccaggctgtagcccgttcccttgattggtccaaggtcaccctggatggccggccacttaccacc +at-----ccagcagtactccaagacattctatgtat-tgccgcttcgcggcaagctttccttctgggaagct +ggcacgactaag--gctggctacccctataattacaatactactgctagtgaccagattttgattgagaatg +cagccggtcac------cgtgttgctat-atccacttatactactagtctcgg--------------tgccg +gccctgtgtctgtttc-tgcggttggcgttcttgccccgcattctgctttagccgtgcttgaagataccatt +gatt---------accctgcccgcg----cccacacttttgatgatttctgctctgagtgccgcaatc---t +cggtttgcagggctgcgctttccagtc--------taccattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaatcaa-tt----t--cccc-ttt------gt +gccc-cct--------tc-taaa-ct-tt------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355355.1/17318/1-7318 |Hepeviridae isolate HESQL107, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatcccgtgttcagactgatatcct +tattaacctgatgcaaccccgacagcttgtgttccggcctgaagttctttggaatcatcctatccagcgggt +catacataatgagcttgagcaata---ttgccgagccc-gcgctggccgctgtttagaggtcggcgctcatc +ctagatccatcaatgacaatcccaatgtcctgcaccggtgctttcttcgccctgtcgggagagatgtccagc +gctggtattctgcccccacccgcggcccagcggctaactgccgccgctcagcgctacgtggtttgccccctg +tcgatcgcacatattgtttcgatgggttctcccgctgcgcctttgccgctgagaccggggttgctttgtact +cactgcatgacctttggccctcggacgttgcggaggccatggctcgccacgggatgacgcgcctgtacgccg +tcctccaccta-cctcctgaggtcctgctaccacctggcacttaccatacaacctcctatcttctgattcac +gatggtaaccgcgccgtcgtgacttatgaaggtgatactagtgcgggctataaccacgatgtgtccatactt +cgtgcatggatccgcaccaccaaaatagttggtgatcacccactggtaatagagagggtccgcgccatcggc +tgccattttgttctgctccttactgcagcccctgagccatccccaatgccttatgttccgtaccctcgttca +acagaggtatacgttagatccatatttggtcctggt---------gggtcgccctctctcttcccgtcagcc +t----------gctctaccaagtcta-catttcacgccgtcccggtccatatctgggaccggcttatgcttt +ttggtgccaccttagatgaccaggccttttgctgctcgcggctcatgacctatctccgcgggattagctata +aagtgactgttggcgcactcgtcgccaacgaaggctggaatgcctcggaggatgcgcttaccgccgtgatta +ctgcagcgtatctgactatctgccatcagcgctacctacgaacacaggccatttctaaaggcatgcgccggc +tagaggttgagcacgcccaaaagtttatcactaggttatatagttggctgtttgaaaagtc---------ag +gccgcgactacatccccggccgccagctccagttttatgcgcagtgccgccgttggctctcggccggttttc +acctggaccccagggttctcgtttttgacgaggcggtcccttgc---cgctgccggagctttctgaagaa-- +----ggttgctgggaaattttgctgctttatgaaatggctgggccagga------gtgcacctgttttttgg +----------------agccagcggagggcctggttggtgactgtggc--------catgacaacgaggcct +atgagggttctgaggtggaccccgctgagcctgctcacctcgatgtttccgggacctatgcggtccacggcc +gtcagctcgaggccttatatagagcgcttaacatcccagatgacattgcggctcgcgcgtcacgtctgacgg +ccactgtagaacttgccgccagcccaggccgactcgagtgtcgtacggtgcttgggaataagacttttcgta +catcgataactgatggcgcccaccttgaagccaacggtcc------------------------cgagcagt +acgttttgacatttgatgactctcgccaggctatgggggctgggccccacagcctcacgtatgaacttgtcc +ctgccggtttgcaggtcagaatatcttct-------aatggcttggattgtaccgctatattcccc---cct +ggtggggcaccgagtgctgcaccaggtgaagtggcggccttctgtagcgctctatacaggtacaatagattc +acccagcgccattcgctgaccggtgggctgtggctgcaccctgaggggctccttggcctgttcccccctttc +tctccggggcacctttgggagtctgcaaaccccttttgcggtgagagcacactttatacgcggacttggtct +acatctggtttctctagcgacttctctccacctgaggcagcttacgccgccccagcacccgacat----agg +gccaccctcgggtgccacctcatctgctagtgatat-----------------ctgggcgtt---------- +---------tccaccgccc----tctgagaggt--------------cggcgatcgcaccgccacccgtagc +cccggttagtaagccagttaa---------------------------------------ctcgcc------ +------------------------------------------------------------------------ +-aagttttac-------------------------------------------------------------- +-------------tacaccc----aggccccttgctcgtgagccgcccacaccaccaccggctctaactccg +g---------------------------------------------taagtgatccggcgaacccgtctagc +cttactacatataag-------------------------------------ccccccgtccgtaagtcgcc +cacaccacc--------------------------------------accggcccgcactcgccggc----- +-------------------tcctttacacatacccagatggggccaaggtgtatgcaggttctttgttcgag +tcagattgtgactggctggttaacgcatctaaccctggccaccgtcctggcggaggtctctgccatgcattt +taccagcgtttcccggaatcgt------tccatccgactgattttgttatgcgtgaggg---tcttgccgct +tatactctgagcccgcgcccgatcatccatgctgtggcccccgactacagggttgagcagaaccccaagagg +cttgaggcggcatatcgtgagacctgctcccgtctcggcacagctgcttatcctctattggggtcagggatt +taccaggtccctgtaagtttaagtttcgacgcttgggagcgcaatcaccgcccaggcgatgaactctatctc +actgagccagctgccgcc-------------------------------------------------tggtt +tgaggccaataagccagccca--------------------------------------------------- +------------------------------------------gccagctttaacgattactgaggacaccgc +cc------------gtacagctaaccttgcgcttgagattg------------actctgctactgaggtggg +ccgagcttgc---gccggttgtattattaaccccgggattgtccactaccagttcactgccggggttcctgg +ctctgggaagtctagatctatacagcagggagatgttgatgtcgtggttgtgccgactcgtgagcttcgtaa +cagctggcggcgccgcggctttgctgcttttacaccccacacagcagctcgcgttactgccggccggcgtgt +tgtgatagatgaggcaccttcgctcccaccgcacttgctgttgctccatatgcagcgggcctcatcggtcca +tctccttggtgaccccaaccagatccctgccattgattttgagcacgctggtttggtcccagcgatccgccc +cgaactagcccctactagttggtggcatgttacccaccgctgccccgccgatgtgtgtgagctcatacgtgg +ggcctaccccaagattcagacgaccagccgcgtgttgagatctttattttggaacgag------cctgcggt +gggtcagaagctggttttcacgcaggctgccaaggctgccaaccccggcgcaatcactgtccatgaggccca +gggtgccacgttcactgagactactatcatagccacggccgacgctagaggtcttattcaatcttcccgcgc +acatgccatcgttgcgcttactcgccacacagagaaatgcgtcattctcgacgctcccggcctgctgcgtga +ggtcggtatttctgatataattgtcaataacttt------------------------------ttcttggc +tggcg--gtgaagtgggccaccaccgcccttccaccataccgcgtggcaatccagaccaaaatttagacac- +-----cttacgggcgtttcccccgtcctgccaaatcagtgcctaccaccaattggctgaggagctgggccat +cgaccggccccagtggccgccgtcctgcccccctgccctgagcttgagcaggggctactctacatgccgcag +gagcttacggtgtccgatagcgtcctaatctttgaactcacggacatagttcactgtcgtatggccgccccc +agtcaacgtaaggcggttctttctacgctcgtcggtaggtatggccgccgaacgaagctgtacgaagcggcc +cattctgatgttcgcgagtctctggggaggtttatccctactatcggaccggtgcaggccaccacatgtgag +ttatatgagctggttgaggccatggtggagaaaggtcaggatggctccgccgtgcttgagctcgacctctgt +agccgagatgtctcacgtattacattctttcagaaggactgtaataaatttacaacaggtgagaccattacc +catggcaaggtgggccagggcatttcggcttggagcaagaccttttgtgctttgttcggcccgtggttccgt +gccattgagaaggagattctggctctacttccacccaatattttctatggcgatgcctacgaagagtcagtg +ttctctgcagctatttctggggccggctccagtatg---gtttttgagaacgatttctctgagtttgatagt +acccaaaataatttttctct------------------cggccttgagtgtgtcattatggaggagtgtggc +atgccccagtggctcatccgactgtatcatctagttagatcagcctggactctgcaggccccgaaagagtct +ttgaaaggtttctggaagaagcattccggcgagcctggcaccctcctttggaacaccgtctggaacatggcg +atcatagcacactgctatgaattccgtgacttgagggtggcagcgtttaagggggacgattcagtggttctt +tgcagtgattaccgccagagccgcaatgcggctaccctgatagccggctgtgggttgaaactgaaggttgat +taccgacctataggtctgtatgccggtgttgtagtggccccgggcctcggtgcacttcctgatgttgtccga +ttcgccggtcgattatctgagaagaactggggcccgggccctgagcgcgccgaacagctgcgcctggcagtt +tgtgatttccttcgagggttgacgaatgtggcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +cggtgttagccctgggctggtgcataaccttattggcatgctacagactattgctgacggaaaggcccattt +taccgagactgtcaaacctgtgctggatcttacaaactctatcatacagaggttggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggttgttct +gttgctgctcttcgtgtttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcttatcacaacccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgttaac +tgctgtttcaccagcgcctgacacggctccagtccctgatgtagactctcgtggtgccatcctgcgccgcca +gtataatttgtccacctccccactaacttcatctgttgcttctgggactaatcttgtcttgtatgcagcccc +gctcaaccctcttttgcctcttcaagacggcacgaacactcacatcatggcgactgaggcgtctaattacgc +tcagtatcgggttgtccgggctacgatccgttaccgccctttggtgccgaatgccgtcggtggttatgcaat +ttctatttccttttggcctcagactacaaccacacccacctctgttgatatgaattctattacttctactga +tgttaggattctagtccagcctggcatagcctctgagctggtcatcccgagtgagcgccttcactatcgtaa +tcaaggctggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggcttggtcatgctttg +tattcatggttcccctgttaattcctataccaacacaccctatactggggcattagggctccttgactttgc +acttgagcttgaattcaggaatttgacccccgggaacactaacacccgtgtgtcccgatacactagtacagc +tcggcaccgtttgcgtcgtggtgccgatgggacagccgagcttacaactactgcagctacacgttttatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggcgaggtgggccgcggtatagctttaacgctatt +taatcttgctgatacacttctcggcgggctgccgacagaattgatttcgtcggctggaggtcaattgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaacgcacagca +ggacaagggcattgctataccacatgatatagacttaggggattcccgtgtggttatacaagactatgataa +ccaacatgagcaggatcggcctaccccgtcgccggccccgtcccgccccttttcagtcctccgagccaacga +tgtcttgtggctctc-----------------------------tctaactgcagctgaatatgac------ +cagaccacctatggctcgtctaccaatcccatgtatgtctcagatgctgtcacatttgt---taatgtggcg +acgggtgcccaggccgttgcccgatctctcgattggtccaaggtcacattagacggtcgaccactcactacc +at-----ccagcagtactccaagacattttatgtac-tgccgcttcgtggcaagctttccttttgggaagct +ggaacgactaag--gctggctacccttacaattataacactactgctagtgaccagattctgatcgagaatg +cagccggtcat------cgtgttgctat-atctacttacactactagccttgg--------------cgccg +gccctgtgtctgtctc-tgcgatcggcgtccttgccccacactctgctttagctgtgcttgaagatactatt +gatt---------atcccgctcgtg----ctcatacttttgatgatttttgccctgagtgccgcaatc---t +tggtctacagggctgtgctttccagtc--------tactgttgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattta-tt----tc-cccc-ttt------gt +gccc-cct--------tc-taaa-tc-tc----gc-tt-agtatt-----------catatt-t-------c +tgcgttcc----gcg---------------ct--------ccccg---------------------gaacag +aacaaa----------------aaaa---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355356.1/17284/1-7284 |Hepeviridae isolate HESQL120, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatcccgtgttcagactgatattct +tattaacctgatgcaaccccggcagcttgtgtttcggcctgaagttctctggaatcatcctatccagcgggt +catacataacgagcttgagcagta---ctgccgagctc-gcgctggccgctgtcttgaggttggcgctcatc +caagatccattaatgacaaccccaatgtcctgcaccggtgctttcttcgcccggttgggagagacgtccagc +gctggtattccgcccctactcgtggtccagcggctaattgccgccgttctgcgctacgtggtttgccccctg +tcgatcgcacatattgcttcgacgggttctcccgctgcgcctttgccgctgagaccgggattgctttgtact +cactgcatgacctctggccttcggacgttgcggaggccatggctcgccacgggatgacgcgcctgtatgctg +ccctccaccta-cctcctgaggtcttgctaccacctggcacttatcatacaacctcctatcttctgattcac +gatggtaaccgtgccgtcgtgacttatgaaggtgatactagtgcgggctataaccacgatgtgtccatactt +cgtgcatggatccgcaccaccaaaatagttggtgatcacccactggtaatagagagggtccgcgccattggc +tgccattttgtcctactcctcactgcagcccccgagccatccccaatgccttatgttccgtaccctcgctca +acagaggtgtatgtaagatccatatttggccccggt---------gggtcaccttctctcttcccgtcagcc +t----------gctctaccaagtcta-cattccacgccgtccctgttcacatctgggaccggcttatgcttt +ttggtgccaccctagatgaccaggccttttgctgctcgcggctcatgacctatctccgcgggattagctata +aagtgactgttggcgcactcgtcgccaacgaaggctggaatgcctcggaggatgcgcttaccgctgtgatta +ctgcagcatatctgactatctgccatcagcgctacttacgaactcaggccatttccaaaggcatgcgccggc +tagaggttgagcatgcccaaaagtttatcacaaggttatatagctggctgtttgaaaagtc---------ag +gccgtgactacatccccggtcgccagctccagttttatgcgcagtgccgccgttggctctcggccggcttcc +acttggaccccagagtcctcgtttttgacgaggcggtcccttgc---cgctgtcggagttttctaaagaa-- +----ggttgctgggaaattctgttgttttatgaaatggttggggcagga------gtgcacctgttttctgg +----------------agccggcggagggcttggttggtgactgtggc--------catgacaacgaggctt +atgaggggtctgaggtggaccccgccgagcctgctcatctagacgtttccgggacctatgcggtccacggcc +gtcagctagaggctctttatagagcgcttaatctcccagatgacattgcggctcgtgcgtcacggctgacgg +ctactgtagaacttgccgccagcccaggccgactcgagtgtcgtacggtgcttgggaacaagattttccgta +catcaataaccgatggtgcccatctcgaggccaacggtcc------------------------cgagcagt +acgtcttgacatttgatgattctcgtcagaccatgggggccgggccccactgcctcacgtatgaacttgtcc +ctgccggtttgcaagtcagaatatcttct-------aatggcctggattgtactgctatattcccc---cct +ggtggggccccgagtgctgcaccaggtgaagtggcggctttctgtagcgccctatacaggtacaataggttc +acccagtgccattcgttggccggtgggctgtggctgcaccccgaggggcttcttggcctgttccctcctttc +tctccggggcatctttgggagtctgccaaccccttttgtggtgagagcacactttacacgcgaacctggtct +acatctggtttctctagtgacttctctccacccgaggcggcttatgccgccccagcacccgacat----gag +gtcaccctcggctgccccctcgtctgctagtgatat-----------------ctgggtatt---------- +---------tccaccgccc----tcagagaggt--------------cggcggtcgcactaccacccgtaac +ctcggttagtaagccggctaa---------------------------------------cccacc------ +------------------------------------------------------------------------ +-aagtcttat-------------------------------------------------------------- +-------------tacacct----agaccccctgcctgtgaaccgcccgcgccatcactggctttagccccg +g---------------------------------------------tcggtgatccagctaaccagtctagc +cttactacaaacagg-------------------------------------ccccccgcccgtaagccgcc +cacaccacc--------------------------------------accagcccgtacccgccggc----- +-------------------tcctttatacataccctgatggggccagggtgtatgcaggctctttgttcgag +tcagattgtgattggctggttaacgcatctaaccctggccaccgtcctggcggtgggctctgtcatgcattt +taccagcgtttcccggagtcgt------tccatccgactgattttgtcatgcgtgaggg---tcttgccgca +tatactttgagcccgcgtccgatcattcatgctgtggcccccgattatagggttgagcagaaccccaagagg +cttgaggcggcatatcgtgagacctgctcccgcctcggcacagctgcttatcctctactggggtcagggatt +taccaggtccccgtaagtctaagcttcgatgcctgggagcgtaaccaccgcccaggtgatgaactgtatctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggccaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacactgc +tc------------gcacagctaacctggcgcttgagattg------------actctgctactgaggtggg +ccgagcttgc---gccggctgtactattaaccccgggattgtccactaccagttcaccgccggggtccctgg +ttctgggaagtctagatctatacagcagggagatgttgatgtcgtggttgtgccgacccgtgagcttcgcaa +cagttggcggcgccgcggctttgctgcttttacacctcacacagcagctcgtgttactgccggccggcgtgt +tgtgatagatgaggcaccctcgctcccaccgcacttgttgctgctccatatgcaacgggcctcatcggtcca +tctccttggtgaccccaatcagatccctgccattgactttgagcacgccggtttggttccagcgattcgccc +tgagctagcccctactagctggtggcatgtcacccaccgctgccccgccgatgtgtgtgagctcatacgtgg +ggcttatcccaagattcagacgaccagccgtgtgttgaggtctttgttttggaacgag------cctgcggt +gggtcagaagctggtcttcacgcaggctgccaaagcggccaaccccggcgcaatcactgtccacgaggccca +gggtgccacatttactgagaccactattatagccacggccgatgctagaggtcttattcaatcttcccgcgc +acacgccatcgttgcgctcactcgccatacagagaagtgcgtcattctcgacgctcctggcctactgcgtga +ggttggtatttctgatataattgttaataacttc------------------------------ttcctggc +cggtg--gtgaagtgggccaccaccgcccctctaccataccgcgcggcaacccggaccaaaacttagacac- +-----actacgggcgtttcccccgtcctgccaaattagtgcttaccaccaactggctgaggagctgggccat +cgaccggccccagtggccgccgtcctgcccccttgtcctgagcttgagcaggggttactctatatgccgcag +gagctcacggtgtccgatagtgtcctaacttttgaactcacagacatagttcactgtcgtatggccgccccc +agtcaacgtaaggcggttctttctacgctcgtcggcaggtacggtcgccgaacgaagctgtatgaggctgcc +cattctgatgttcgtgagtctctggggaggtttatccctactatcggaccggtccaggccaccacatgcgag +ttatatgagctggttgaggccatggtggagaagggccaggacggctccgctgtgctagagctcgacctttgc +agccgagatgtctcacgcattacgttcttccagaaggactgtaataaatttacaacaggtgagactattgcc +catggcaaggtgggccagggcatctcggcttggagcaagaccttctgtgctttattcggcccgtggttccgt +gccattgagaaggagattctggccctactcccacctaacattttctatggcgatgcctatgatgagtcagtg +ttttctgcagccatttctggggccagctccagtatg---gtttttgagaatgatttttctgagtttgatagt +acccaaaataatttttctct------------------cggccttgagtgtgtcattatggaggagtgtggc +atgccccagtggcttatccgactctatcatttagttagatctgcttggactctgcaggccccgaaagagtcc +ttgaaaggtttctggaagaagcattccggcgagcctggcaccctcctttggaataccgtctggaacatggcg +atcatagcacactgctatgagttccgtgacttgagggtggcggcgtttaagggggatgattcagtggttctc +tgcagtgattaccgtcagagccgcaatgcggctaccctgatagccggctgtgggttgaaattgaaggttgat +taccggcctataggtttgtatgccggcgttgtagtggctccgggcctcggggcacttcctgatgttgtccgg +ttcgccggccgattatctgagaagaactggggcccgggccccgagcgcgccgaacagttgcgcctagcagtt +tgtgatttccttcgagggttgacgaatgtggcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccctgggttagtgcataaccttattggcatgctacagactattgctgatggaaaggcccactt +cactgagactgttaaacctgtgctagaccttacaaattctattatacagaggttggaatgaataacatgtt- +c----------------tgtgcaccacccatggg------------atcgccatgcgccctagggttgttct +gttgttgctcttcgtgtttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcctatcacaatccgggtctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------acgcccccccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgttaac +tgctgtctcaccagcgcctgacacggctccagtccctgatgtggattcccgtggtgctatcttgcgccgtca +gtataatttgtccacctctcctttgacttcatctgtcgcctctggaactaatcttgttttgtatgctgcccc +actcaatcctcttttgcctctccaagacggcacgaatactcatatcatggcgactgaggcgtctaattatgc +tcagtatcgggtcgtccgggctacgatccgttatcgccctttggtgccgaatgccgtcggtggttatgcaat +ttctatttccttctggcctcagacaactactacacccacctctgttgatatgaattctatcacttctactga +tgttaggattttagtccagcctggcatagcctctgagctggtcatcccgagtgagcgccttcactatcgtaa +tcaaggctggcgctctgtcgagacatcgggtgtggccgaggaggaggcgacatcaggcctggtcatgctttg +tatccatggttcccctgttaattcctatactaacacgccctatactggggcattggggctccttgactttgc +actcgagcttgaatttagaaacctgacccctgggaacaccaacacccgtgtgtcccgatacactagtacagc +tcggcaccgcttgcgtcgtggtgccgatgggacagccgagcttacaactactgcagccacacggtttatgaa +ggacttgcatttca---ctggtacaaat---ggtgtcggcgaggtgggtcgtggtatagctctaacgctttt +taatcttgctgatacacttctcggcgggttgccgacagaattgatttcgtcggctggaggtcaactgtttta +ctcccgcccggttgtctcagccaatggcgagccagctgttaagttatacacctctgtcgagaatgcgcagca +ggacaagggcattgctataccacatgatatagacttaggggattcccgtgtggttatacaagactatgataa +ccaacatgagcaggaccggcctaccccgtcgccggccccgtcccgccccttctcagtcctccgagctaacga +tgttctgtggctctc-----------------------------tctaactgcggctgaatatgac------ +cagaccacctatggctcgtccaccaatcccatgtatgtttcagatactgtcacatttgt---taatgtggcg +acgggtgcccaggccgttgcccgatcccttgattggtccaaggtcacactagacggccggccactcaccacc +at-----ccagcagtactccaagacattttatgtac-tgccgcttcgtggcaagctttccttttgggaagct +ggcacgactaag--gctggctacccttacaattataacactactgctagtgaccagattttgattgagaacg +cagccggtcat------cgcgttgctat-atctacttacactactagtcttgg--------------tgccg +gccttgtgtctgtttc-tgcggtcggcgttcttgccccacactctgctttagccgtgcttgaagatactatt +gatt---------atcctgcccgtg----ctcatactttcgatgacttctgccctgagtgccgtaatc---t +tggcctgcagggctgtgctttccagtc--------tactgtcgctgagcttcaacgtct------------- +--------tagaatgaaggtaggtaaaacccgggagtcttaattaa-tt----cc-tcc--ttt------gt +gccc-cct--------tc-taaa-ct-tt----gc-tt-agtatt-----------cttttt-t-------c +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355358.1/17262/1-7262 |Hepeviridae isolate HESQL069, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggtccggccgtttttatcccgtgctcaaactgaaatcct +cattaacttgatgcaacctcgacagcttgtgttccggcccgaagtcctctggaatcatccgatccagcgagt +tatacataatgagctggagcaata---ctgccgagccc-gcgctggccgctgtcttgaagtgggcgcccacc +caagatctattaatgataaccccaatgttctgcaccggtgctttctccgcccggtcggaagagatgtccagc +gctggtattccgcccccactcgtggcccagcggctaattgccgccgttctgcgctacgcggcttgcctcctg +tcgaccgcacatattgcttcgacgggttctcccgctgcgcctttgccgctgagaccgggattgctttatact +cactgcatgacctttggccttcggatgtcgcggaggctatggctcgccacgggatgacgcgtttgtatgctg +ccctccaccta-ccccctgaagttctgttaccacctggaacttaccacacaacttcctaccttctgattcac +gatggcaatcgtgccgtcgtgacttacgagggggatactagtgcgggttacaaccacgatgtgtctatactt +cgtgcatggattcgcaccactaaaatagttggtgatcacccgctggtaatagagagggtccgcgccgtcggc +tgccatttcgttttactccttactgcagcccccgagccgtctccaatgccttacgtcccgtaccctcgttca +acagaggtgtacgttagatccatatttggtcctggt---------gggtcgccttctcttttcccatcagcc +t----------gctctaccaagtcta-cattccatgccgtcccggtccatatctgggaccggcttatgcttt +ttggtgccaccttagatgaccaagccttttgttgctcgcggcttatgacctacctccgcggaattagttata +aagtgactgttggcgcacttgtcgccaacgaaggctggaatgcttcggaggatgcactaaccgctgtgatta +ctgcagcgtatttgactatttgccatcagcgttacctacgaacacaggctatttctaaaggcatgcgccggc +tagaagtcgagcacgcccagaaatttattacaaggctatatagctggttgtttgaaaagtc---------ag +gccgtgattacatccccggtcgccagctccaattttatgcacagtgccgccgttggctctcggctggcttcc +atctggaccctagagttctcgtctttgatgaggcggtcccctgc---cgatgccggagcttcctaaagaa-- +----ggtcgccggaaaattttgttgctttatgaagtggttggggcagga------gtgtacttgttttttgg +----------------agccggtagaaggcctggttggtgactgtggc--------catgataacgaggcct +atgaggggtctgaggtggaccccgccgagcctgcccaccttgatgtctccgggacttatgcggtccacggcc +gtcagcttgaggctctatatagagcgcttaatatcccagatgacattgcagctcgtgcgtcacgtctaacag +ctaccgttgagctcgccgccagtccaggtagactcgagtgtcgtacggtgcttgggaataagactttccgta +catcaataactgatggtgcccatctcgaggccaacggtcc------------------------tgagcagt +acgtcttgacgtttgatgattctcgccaagtgatgggggctgggcctcacagcctcacgtatgaacttgtcc +ccgctggtctacaggttaaaatatcttct-------aatggcctggattgtaccgctatattccct---cct +ggtggggcgccgagcgctgcaccaggtgaagtggcggctttctgtagcgccctatacaggtacaataggttt +acccagcgccattcgctgactggcgggttgtggctgcaccctgaggggctccttggcctgttcccccctttt +tccccggggcatctttgggagtctgcaaaccccttttgcggtgagagcacactttatacacgtacttggtct +acatctggtttttctagcgacttctccccacccgaggtggcttatgccgccccagcccctgacat----ggg +gttaacctcgggtatcccctcctccgctagcgatat-----------------ctgggtgtt---------- +---------tccaccgccc----tctgaggggt--------------cggcgatcatttcgccacctatagc +cccggccggtaagccaactaa---------------------------------------tccgcc------ +------------------------------------------------------------------------ +-tggtcatac-------------------------------------------------------------- +-------------taaacct----cggccacccgttcgtgagccgcccacaccaccaccggccctaacccca +g---------------------------------------------ctagtaagccagctagcccacttagc +cttactgcatctagg-------------------------------------ccccccgtctgcgagccgcc +tacaccgcc--------------------------------------atcggctcgcactcgccggc----- +-------------------ttctttatacatatcctgatggggccaaggtgtatgcaggctctttgtttgag +tcagattgttactggctagttaatgcatctaaccctggccaccgtcctggtggtggtctctgccatgcattc +taccagcgctttccagagtcat------ttcatccgaccgattttgttatgcgcgaggg---cctcgccgca +tacactttgagcccgcgtccgattatccatgctgtggcccccgactatagggttgagcagaaccccaagagg +ctggaggcggcatatcgtgagacctgctcccgcctcggcacagctgcctacccactactggggtcagggatt +taccaggtccctgtgggtctaagctttgacgcctgggagcgtaatcaccgcccaggcgatgaactttacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagcctaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacaccgc +cc------------gcacagccaaccttgcgcttgagatcg------------actccgctactgaagttgg +tcgtgcctgc---gccggttgcactattaaccccgggattgtacactaccagtttaccgccggggttcctgg +ctccgggaagtctaggtctatacagcagggggatgttgatgttgtggtcgtgccaactcgcgagcttcgcaa +cagttggcggcgccgcggctttgctgcttttacacctcacacagcagctcgtgttactgccggccggcgcgt +ggtgatagatgaagcaccttcgcttccaccgcacctgctgttgctccatatgcaacgagcctcatcagtcca +tcttcttggtgaccccaaccagatccctgctattgactttgagcacgccggcttggtcccggcgattcgtcc +tgagctagcccctactagttggtggcatgtcacccaccgttgccccgccgatgtatgtgagctcatacgcgg +ggcctacccaaaaattcagacgaccagccgtgtgttgagatctctattttggaacgag------cctgcgat +aggtcagaagctagtttttacgcaggcagccaaggccgccaatcccggcgcaattaccgttcacgaggccca +gggggccacgtttactgagactactatcatagccacggccgatgctagaggtcttattcaatcttctcgtgc +acatgccatcgttgcacttactcgccatacagaaaagtgcgttatcctcgacgctcctggcctattgcgtga +ggttggcatttctgatataattgtaaataacttc------------------------------ttcctggc +tggtg--gtgaagtgggccaccatcgcccctctaccatcccccgcggcaatccagaccagaacttagacac- +-----cctccaagcgttccctccgtcctgccaaatcagcgcttaccaccagctggctgaggagctgggccac +cggccggccccagtggccgccgtcctgcccccctgccctgagcttgagcaggggttactttacatgccgcag +gagcttacggtgtccgatagtgtcctaatctttgaactcacggacatagtccactgtcgtatggccgcccct +agtcaacgtaaggcggttctctctacgctcgtcggtaggtacggccgccgaacgaagctgtatgaagcagcc +cactctgatgtccgcgagtctttagggaggttcatccctattatcggaccggtccaggccaccacatgtgag +ctatatgagctggttgaggccatggtggagaagggtcaggacggttccgctgtgcttgagcttgatctctgc +aaccgtgatgtctcgcgtattacattcttccagaaggattgtaacaaatttacaacaggtgagactattgcc +catggtaaggtgggtcaggggatttcggcttggagtaaaaccttttgtgctttatttggcccatggttccgc +gccattgagaaggagattctggctctgctcccacctaatattttctatggcgatgcctatgaggagtcagtg +ttctctgcggccatctctggagctggctccagtatg---gtttttgagaatgatttttctgagtttgacagc +acccaaaataatttctctct------------------tggccttgagtgcgttattatggaggagtgtggc +atgccccaatggcttatccgactgtatcatctagttagatcagcctggattctgcaagccccgaaagagtct +ctgaaaggcttctggaagaagcattccggcgagcctggcaccctcctttggaacaccgtctggaacatggcg +atcatagcacactgctatgaattccgtgacctgagagtggcagcgttcaaaggggatgattcagtggttctt +tgcagcgattaccgtcagagccgtaatgcggctactctgatagccggttgtgggttaaaattgaaggttgat +taccggcctataggcttgtatgccggcattgtagtggctccaggcctcggggcactccctgatgttgtccgc +ttcgcaggtcgattatcagagaagaattggggtccgggtcccgagcgcgctgagcagctacgcctagcagtt +tgtgattttcttcgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacagactattgcagacggaaaggcccattt +tactgaaactgttaagcccgtgctggatctcacaaactccatcatacagaggttagaatgaataacatgtt- +c----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcggcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaacccggggctggagctcgcccta +gacagccggcccg---------------ccccctcggctcctcttggcgtgatcagtccca----------- +------gcgcccctccgctgtcccccgtcgtcgatctaccccc---------gctggggctgcgccgttaac +tgctgtctcaccagcgcctgatacggccccagtccctgatgttgactctcgtggcgctatcttgcgccgcca +gtataatctgtccacctctcctttaacttcatctgttgcctctggaactaatcttgtcttgtatgctgcccc +gcttaaccctctcctgcctcttcaggacggcaccaacactcacatcatggcgactgaggcgtctaattacgc +tcagtaccgggttgtccgggctacaatccgctaccgccccttggtgccgaatgccgtcggtggttatgcaat +ttctatctctttttggcctcagactacaactacacccacctctgttgacatgaactctattacttccactga +tgttcggattttggtccagcctggcatagcctctgagctggtcatcccgagcgagcgccttcactatcgtaa +tcaaggctggcgctctgttgagacatcaggtgtggccgaggaggaggcgacatcaggcttggtcatgctctg +tattcatggctcccctgttaattcttataccaacacgccctacactggggcactggggctccttgattttgc +actcgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgttacactagtacagc +ccggcaccgcctgcgtcgtggtgccgatgggacagctgagcttacaactactgcagccacacgttttatgaa +ggacttgcatttca---ccgggacaaac---ggcgtcggtgaggtgggacgtggtatagccctaacgctatt +taatcttgctgatacgcttctcggtgggttgccgacagaattgatttcgtcggccggaggtcagctgtttta +ttcccgcccggttgtctcagccaatggcgagccaactgttaagttatacacttctgtcgagaatgcacagca +agataagggtattgctataccacatgatatagacttaggggattcccgtgtggttatacaagattatgacaa +ccaacatgaacaggaccggcctaccccgtcgccggccccatctcgtcccttttcagtccttcgagccaatga +tgtcttgtggctctc-----------------------------tttgactgcagctgaatatgat------ +cagactacttacggctcgtcgaccaatcctatgtatgtctcagatactgtcacatttgt---taatgtggcg +acaggcgcccaggctgttgcccgatcccttgattggtccaaggtcactttggacggccggccacttaccact +at-----ccagcagtactccaagacattttatgtgc-tgccgcttcgtggcaagctttccttctgggaagct +ggtacgactaag--gctggctatccttacaattacaacactactgctagtgaccagattcttattgagaatg +cagccggccat------cgtgttgctat-atctacttacaccactagtcttgg--------------tgccg +gccctgtgtctgtttc-tgcagtcggcgttcttgctccgcactctgctttagccgtgcttgaagatactatt +gatt---------atcccgcccgtg----cccatacttttgatgatttctgccctgaatgccgtaacc---t +cggcctacagggctgtgctttccagtc--------tactatcgctgagctccagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattaa-tt----cc-tcc--ctt------gt +gccc-cct--------tc-ccat-c----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355359.1/17167/1-7167 |Hepeviridae isolate HESQL169, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +agcggctaactccgccttggcgaatgctgtggtggtccggccgttcttatcccgtgtccagactgatatcct +cattaatttgatgcaaccccggcagcttgtattccggcctgaagtcttctggaaccacccgattcagcgagt +catacacaacgaattggagcagta---ttgccgggctc-gcgctggtcgttgtcttgaagttggcgcccatc +cgagatccatcaatgacaaccctaatgttttgcaccggtgctttcttcgcccggttggcagagatgtccagc +gctggtattctgcccccacccgtggcccggctgctaattgccgtcgttctgcgcttcgcggcctgccccctg +tcgatcgcacatactgcttcgatgggttttcccgttgcgctttcgccgctgagaccgggattgctttatact +cactgcatgacctctggccctcggacgttgcggaggccatggcccgccatggcatgacacgcctgtatgctg +tcctacactta-ccccctgaggtcctgttaccacctggcacttatcacacaacctcctatctcctgatccac +gatggcgatcgtgccgtcgtaacttatgagggagacaccagtgcaggctataaccacgatgtatctatactt +cgagcttggatccgcaccacaaaaatcgtcggtgaccacccactggtgatagagagggtccgtgccatcggc +tgccactttgttttgcttttcactgcagcccctgaaccatcccctatgccttatgttccttaccctcgctca +acagaggtgtatgtcaggtccatatttggccctggc---------ggatcgccgtctctttttccatcagcc +t----------gctctactaaatcta-catttcatgctgtcccggttcatatttgggaccggctcatgctct +ttggcgccaccctagatgaccaggccttctgttgctcgcggcttatgacctatctccgcgggattagttata +aagttaccgttggtgcacttgttgccaacgagggttggaatgcttcggaggatgcacttaccgctgtgatta +cagcagcgtatctgacaatttgccatcagcgctacctccgaactcaggccatttctaaaggtatgcgccggc +tggaggtcgagcacgcccaaaagtttattacaaggttatatagctggctatttgagaaatc---------ag +gccgtgactatattcccggccgccagcttcagttctacgcacagtgccgccgttggctctcagctggtttcc +acctggatcctagggtccttgtttttgacgaggcagtcccctgc---cgttgccggagcttcctgaagaa-- +----ggtcgccggcaaattctgttgctttatgaaatggttggggcagga------gtgcacttgttttctgg +----------------agccggcggaaggtttggttggcgactgtggc--------catgacaacgaggcct +acgagggatctgaggtggaccctgccgagcctgctcatcttgacgtttccgggacctatgcggttcatggcc +gtcagcttgaggctctatatagagcgttaaacatcccacacgatatcgcggcccgcgcgtcgcgtctgacgg +ccactgtggagctcgctgccagcccaggccgacttgagtgccgcacggtgctcgggaataagactttccgca +catcgataactgacggcgcccatctcgaggccaacggccc------------------------cgagcagt +acgtcttgacatttgatgattctcgccaagcaatgggggcagggtctcacagcctcacatacgaacttgtcc +ctgccggtctgcaggtcaaaatatcttcc-------aatggcctggattgtactgcagtatttccc---cct +ggcggagcgccaagcgctccaccaggtgaagtggcggctttttgcagtgctctatacaggtataatagattc +acccagcgccattcgctaaccggtgggctgtggctgcaccctgaaggactccttggtttgtttccccctttc +tcccctgggcatctctgggagtctgcaaacccattctgcggtgagagtacactttacactcggacttggtct +atatctggcttttccagtgacttctctcctcctgaggcggctcccgccgccataggccctgacac----ggg +gttgcccccgggcaccccctcttctgctagtgatgt-----------------ctgggcgct---------- +---------cccgccaccc----tctgagaggt--------------cggcgattgtcttgtcacccgaaac +cctgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttagtaagcctgctaatctgcttagt +cttgctgcacctaag-------------------------------------cctcctgttcgtaagccgcc +tacgccgcc--------------------------------------accggcccgcacccgccggc----- +-------------------ttctttatacttaccctgatggggccaaggtgtatgcaggctccctgtttgag +tcagattgtgattggctggttaatgcgtccaaccctggtcaccgtcctggtggtggcctttgccatgcattt +taccagcgcttcccagagtcct------tccacccaactgattttgtcatgcgtgaggg---gctcgctgca +tacactctgagcccgcgccctatcatccatgccgtggctcctgattatagggtcgagcagaacccgaagagg +ctagaggcagcatatcgtgagacctgttcccgcctcggtacagctgcctatccgttgttggggtcggggatc +taccaggtccctgtaggcttgagtttcgacgcctgggagcgtaaccaccgtccaggcgacgagctctacctt +accgagccagctgccgcc-------------------------------------------------tggtt +tgaagctaacaagccaaccca--------------------------------------------------- +------------------------------------------accggccttaacaattactgaggacaccgc +cc------------gtacggctaatctcgcgcttgagattg------------attcagctaccgaggtggg +tcgcgcttgc---gccggttgtactgttagccccggcgtcgtccattaccagtttaccgctggggtccccgg +ctctgggaagtctagatccatacagcaaggggatgtcgatgttgtggtcgtgccaacccgtgagcttcgcaa +cagctggcggcgccgtggctttgctgctttcacaccccacactgcagctcgtgttactgctggtcggcgtgt +cgtgatcgatgaagcgccttcgctcccaccgcacttactactgctccatatgcaacgagcctcatcggtcca +ccttctcggtgatcctaaccagattcctgccatcgactttgaacacgccggtctggtcccggcgatccgccc +cgagctcgcccctactagttggtggcatgtcacccaccgttgtcctgccgacgtgtgtgagctcatacgcgg +ggcttacccaaagatccagacgactagtcgtgtaatgcgatctctgttttggaatgaa------cctgcagt +gggccagaaattggtattcacacaggcagccaaggcggctaatcccggtgcaattactgttcatgaggccca +aggtgctacgtttacagagactactattatagccacggccgatgctagaggccttattcaatcttctcgcgc +acatgccattgttgcgctcacccgccatacagaaaagtgtgtcatccttgacgcacctggtctactgcgtga +ggtcggcatttcggacattattgttaacaacttt------------------------------ttcctggc +cggag--gtgaggtgggtcatcaccgcccttctatcataccccgtggcaacccagaccgcaatttagatac- +-----cctgcaagcgtttcccccttcttgccaaattagtgcctaccatcagttggccgaggagctgggccac +cggccggccccagtggccgctgttttgcccccttgccctgagcttgagcagggcttactctatatgccacag +gaactcacagtgtctgatagtgttttagtttttgagctcacggacatagttcactgccgtatggccgccccc +agtcaacgtaaggcggtcctctcgacgcttgtcggcagatacggccgtcgaacaaagctgtatgaagcagcc +cattccgacgtccgtgagtccttagggagatttatccctaccatcgggccagtccaagccaccacgtgtgaa +ttatatgagttagttgaggccatggtggagaagggtcaggacggttccgccgtgcttgagctcgacctctgt +aaccgcgatgtctcgcgtattacatttttccagaaggactgtaataagtttacaacaggcgagactatcgct +catggtaaggtgggccagggtatttcggcttggagcaaaaccttctgtgccctatttggcccgtggttccgt +gctattgagaaggagatcctggccctgctcccgcccaacatcttctatggcgacgcctatgaggagtcggtg +ttttctgcagccatctctggggcgggttccagtatg---gtttttgagaatgacttttctgagttcgatagt +acccaaaataacttctccct------------------tggcttagagtgtgtcatcatggaggagtgtggc +atgccccagtggcttattcgactgtaccatttagttagatcagcctggaccctgcaagccccgaaagagtct +ttgaaaggtttttggaagaagcattccggcgagcctggtactctcctttggaacaccgtctggaacatggcg +atcatagcacattgctatgaattccgtgacttgagagtggcagcgtttaagggggatgattcagtggttctt +tgcagtgattaccgtcagagccgtaatgcggccaccctgatagccggttgtggattgaaactgaaggttgat +taccgtcctataggtctgtatgctggtgttgtagtagctccgggcctcggggcactccctgacgttgtccgg +tttgccggtcgactatctgagaagaactggggcccgggccctgaacgtgctgaacagttacgcctagcagtc +tgtgacttcctccgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------tcta +tggggttagtcccgggctggtacataaccttattggcatgctgcagacgattgctgatggaaaggcccactt +taccgaaactgtcaagcccgtactggatctgacaaattctatcatacagaggttggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gttgttgttcctcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgc------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcagtgc +cagcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgccgacgttgtatcacaacccggggctggaactcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------gctggggctgcgccgctaac +cgctgtttcaccagcgcctgacacagccccggttcctgatgttgattctcgtggtgctattctgcgccgcca +gtataatctatctacctcccctctgacttcatctgtcgcctctggaactaatcttgtcctatacgccgcccc +gcttaatccccttctaccccttcaagacggtaccaatactcatatcatggcgactgaagcatctaactatgc +tcagtaccgagttgtccgggctacaattcgttatcgccctttggtgccgaatgctgtcggtggctatgcaat +atctatttctttctggccccaaaccacaactacacctacttctgttgacatgaattctattacttctactga +tgttaggatattagtccagcctggcatagcctctgagttggtcatcccgagtgagcgccttcactaccgtaa +tcagggttggcgctccgtcgaaacctcgggtgtggctgaggaggaggcgacatcaggcctggttatgctttg +tattcatggctcccctgttaactcttatactaacacaccctataccggggcattggggcttcttgattttgc +acttgagcttgagtttagaaatctgactcctgggaacactaacacccgtgtgtcccgctacaccagcacggc +ccgacatcgcctgcgccgtggtgccgatgggactgccgagctcacaactactgcagccacacgttttatgaa +ggacctgcacttca---ccgggacgaat---ggtgttggcgaagtgggtcgtggtatagctctaacgttatt +caatcttgctgacacacttctcggcgggttgccgacagaattgatttcgtcggctggaggtcagctatttta +ctcccgcccagttgtctcagccaatggcgagccgactgtaaagttatatacctccgtcgagaatgcacagca +ggacaagggtattgctataccacacgatatagacttaggggactcccgtgtggttattcaggactacgataa +tcaacatgaacaggatcggcctaccccgtcaccggccccgtcccgccctttttcggtcctccgagccaatga +cgtcctgtggctctc-----------------------------cttgactgcagctgaatatgat------ +cagaccacttatggctcgtcgaccaaccccatgtatgtttcagatactgttacacttgt---taatgtggct +acgggtgcccaggctgttgcccgctctcttgattggtccaaggtcactctagatggccggcctcttactacc +at-----ccagcagtactctaagacgttctatgtgt-tgccgcttcgtggcaagctctccttttgggaggct +ggtactactaag--gccggctacccttataattataatacaactgctagtgatcagattttgattgagaatg +cagccggccac------cgtgtagctat-ctctacttacactactagtcttgg--------------tgctg +gccctgtgtcagtttc-tgccgtcggcgtactcgccccgcactctgctctagctgtgcttgaagacaccatt +gatt---------accctgcccgtg----cccatacttttgatgacttttgccctgagtgccgcaatc---t +tggcttacagggctgtgccttccaatc--------tactatcgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-c-t--ctt------gt +gccc-cc----------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355360.1/17159/1-7159 |Hepeviridae isolate HESQL105, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcatcactactgccattgag---caagctgctctggc +tgcggccaactctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagctggttttccgacctgaggtgctctggaaccatcctatccaacgggt +tattcataatgaattagaacagta---ctgccgggccc-gggctggtcgctgtttagaggttggggcccacc +cgagatctattaatgataaccctaatgttctgcaccgctgctttttacgaccagttggtagagatgttcagc +gctggtactctgcccccacccgtggccccgcggccaactgtcgccgttccgctttgcgtggcctcccccctg +ttgaccgcacctactgttttgatggattttctcgttgctcctttgctgcagagactggtgtcgccctctact +cactgcatgacctctggccggccgatgttgcagaggccatggcccgacatgggatgacacgcttatacgctg +cactacatctc-ccccctgaagtattactaccacctggtacttaccacacaacttcatatcttcttatccac +gacggcgatcgcgccgttgtgacttatgagggtgacactagtgcaggttacaaccatgatgtttccatactt +cgcgcatggatccgcacaactaagatagttggcgatcatccgttggtgatagagcgtgtgcgggctattggc +tgccactttgtgctgctgctcactgcggcccctgagccgtcaccaatgccttatgtcccatacccccggtcg +acagaggtgtacgttcgctccatattcggccctggc---------gggtccccgtctctgtttccatcagct +t----------gctccacaaaatcca-catttcatgccgtcccagttcatatttgggaccggctcatgctct +ttggtgctaccctggacgatcaggcgttctgctgctcacggcttatgacttaccttcgtgggattagttaca +aggttactgtaggtgccctcgttgctaatgaagggtggaatgcctcggaggacgctcttaccgctgttatca +ccgcagcgtatttgaccatttgccatcagcgttacctccgcactcaagctatatccaaaggcatgcgccggc +tggaggttgagcatgctcaaaaatttatcacaagactctatagttggctgtttgagaagtc---------cg +gccgtgactacatccccggccgtcagctccagttctatgcacagtgtcgccgctggctatcggcaggtttcc +acctcgatccaagggtgcttgtttttgatgagtctgcgccctgc---cgttgtaggacgtttctcaagaa-- +----ggtcgcaggtaaattctgctgttttatgaagtggctggggcagga------gtgcacctgctttctgg +----------------aaccagctgagggtctggttggtgaccatggt--------cacgataatgaagcct +atgagggttctgaggtcgaccgggcagagcctgtccattttgatgtttctgggacttatgccgtccatgggc +accaactcgtggccctgtatagggcgcttaacatcccgcacgacatcgccgcccgagcctctcgcttaaccg +ccactgttgaacttactgcaggtccagaccgtttggagtgtcgcactgtgctcgggaataagaccttccgga +caacggtggttgacggcgcccatcttgaggcgaatggtcc------------------------cgagcagt +atgtcctttcgtttgatgcctcctgccagtctatgggggccgggccgcataatctcacctatgagctcactc +ctgctggtttgcaggttaagatctcgtct-------aatggcctggattgcactgcaatattcccc---ccg +ggcggagcccctagcgcagatccgggggaggtagcagctttctgcagtgccctctataggtacaataggttc +acccagcgccattcgcttacaggcggtctgtggttgcatcctgaggggctattaggcatcttccctcccttt +tcccctgggcatctttgggagtccgctaaccccttttgtggggagggaaccctgtatacccgaacttggtca +acatctggtttttctagtgatttttcccccccggaagcggctgccgctacgccggctgctgccac----ggg +tttacctc---accctacaccccctgttagtgatat-----------------ttgggtgtt---------- +---------gccgccgccc----tctgaagagt--------------cccaggtcgatgcagcgcctgttcc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttcctgagcctgttcaaccgtccggc +cccgctaggccgaag-------------------------------------gcccccgtgcgtaagccacc +aacaccact--------------------------------------acccccgcgtacccgtcgcc----- +-------------------tcctctacacttatccggatggggcaaaggtgtatgcggggtcgctgtttgag +tcagactgtgattggctggtcaatgcgtcgaatcccggccaccgtcccggaggtggcctctgtcatgccttt +taccaacgctaccccgagtctt------tccacccaactgagttcattatgcgtgacgg---tcttgccgca +tatactttaactccccggcctatcatccacgcggtggctcccgattatagggttgagcagaacccaaggagg +cttgaggcagcataccgggagacttgctcccgccgtggtaccgccgcttatccactcctcggctcgggcata +tatcaagttcccgtcagcctcagctttgatgcttgggagcgtaaccaccgccccggggatgagctttacctg +accgaccccgccgccacc-------------------------------------------------tggtt +cgaggctaataaaccagcgca--------------------------------------------------- +------------------------------------------accggctctcacaataactgaagatacagc +cc------------gcacagccaacctagcactagagatcg------------acgctgctacggaggttgg +ccgagcttgt---gccggttgtacagttagtcctggggttgtgcactatcaatttaccgccggggtcccagg +ttctgggaagtcgcggtctatacagcaaggggacgtcgatgtagtggttgtccccactcgggagcttcggaa +tagttggcgtcgccggggttttgcagctttcacgcctcacacggcggcccgtgttaccacgggccgtcgtgt +tgtgattgatgaagccccatctctcccgccgcacttgctgcttttacacatgcaacgggcctcgtcggtcca +tcttctcggcgacccaaatcagatccctgctatagactttgagcatgctggcctagtccccgcaatacgtcc +cgagcttgcacccaccagctggtggcatgtcactcatcgttgccccgctgatgtgtgcgagcttatacgcgg +ggcttaccctaaaatccagaccactagccgcgtgctgcggtctttattctggaatgag------cccgccat +tggccagaagttagtttttacacaggccgctaaggctgccaaccctggtgcgattacagttcacgaggccca +gggcgccactttcacggtgactacaatcattgccacggctgatgctagggggctcattcaatcttcccgagc +ccacgccatagtcgcacttacccgccacacagagaagtgcgttatcttagatgcccccggtttgctacgtga +ggttggtatatctgatataattgttaacaatttc------------------------------ttccttgc +tggtg--gggaagttggccaccaccgcccctccgttataccccgcggcagtccagaccagaacctcgcgac- +-----attacaggcctttccaccctcctgtcagatcagtgcttatcatcagctggccgaggagctgggtcac +cgcccggctcccgtcgctgccgtcctgcccccctgcccggaacttgagcagggcctgctgtatatgccacaa +gagctcacggtgtctgatagcgtgctggtttttgaactcacggacatagttcactgccggatggccgctcct +agccagcggaaggccgtcctatcgacgcttgtgggtaggtatggccgccggactaagctgtatgaggcggct +cactccgacgtccgtgagtccctgacaagattcatccctactatcgggcccgttcaagcaactacgtgtgag +ttatacgaactggttgaggccatggtggataagggccaggacggctctgccgtacttgagcttgacctttgc +aatcgcgatgtatcgcgtattacattcttccagaaagattgtaataagttcaccacaggggagaccattgcc +cacggtaaggtcggtcagggcatttcggcttggagcaagaccttctgtgccctctttggcccgtggtttcgt +gccattgaaaaagaaatactggccctgctcccgcctaatattttctacggtgatgcgtatgaagagtctgtg +tttgccgccgctgtgtctggggcaggttcatgcatg---gtatttgagaatgatttttcagagtttgacagt +actcaaaataatttttccct------------------tggcctcgagtgcgtaattatggaggaatgtggc +atgccccaatggctaatccggttgtatcatctggttcggtcagcctggattctacaggcgccgaaggagtct +cttaaagggttttggaagaagcattctggtgagcccggcaccctcctttggaataccgtctggaatatggct +atcatagcacattgctatgagtttcgtgatcttagggccgctgctttcaagggtgatgactcggtggtcctt +tgcagcgactaccgtcaaagccgtaacgcggcggccctgattgcgggttgcgggctcaaactaaaggttgat +taccgccctattgggttgtatgccggtgtggtggtggcccccggcctggggacgctgcccgatgtagttcgc +tttgctggccggctgtctgagaagaactggggccctggaccggagcgggccgagcagctgcgccttgctgtt +tgtgattttcttcgagggctgacgaatgttgcgcaggtatgtgttgatgttgtatcccgag-------ttta +cggggttagtcctgggctggtacataaccttattggcatgttacaaactattgccgatggcaaggcccactt +cacagagactgttaaacctgtgcttgaccttacgaactctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgtgccctagggctgttct +gttgttgttcctcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgcctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcatttcgcaacccggggctggagctcgccctc +gacaaccaccccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccacgtcgtcgatctgcccca---------actggggctgcgccgctgac +tgctgtatcgcctgcccctgatacggctcctgtgcctgatgttgattcgcgtggcgctatattgcggcgcca +gtataatttatctacatctccactcacatcatccgttgcttcgggtactaatttggttctttatgctgcccc +gctaaatcccttgttaccccttcaggatggcactaacactcacatcatggctactgaggcatctaactatgc +ccagtaccgggttgtccgagctacgatccgatacaggccgttggtgccgaatgctgtcggtggttatgcgat +ctctatctcattctggcctcagactactaccacccctacgtctgttgatatgaactctattacctccactga +tgttaggatcctagttcagcccggtatcgcctccgagttagtcatccctagtgaacgcctccactaccgtaa +ccaaggttggcgctctgtggagacctctggtgtggctgaggaggaggctacctctggtctggtgatgctctg +tatccatggctcccccgttaattcctacaccaataccccttataccggggcgcttgggctccttgattttgc +tctagagcttgagtttaggaacttgacacccgggaacaccaacacccgcgtttcccggtatacaagcactgc +ccgtcatcggctgcgccgcggtgccgatggcaccgctgagcttaccaccacagcggctacacgtttcatgaa +ggacctgcacttca---ccggtacgaat---ggggtcggtgaggtgggccgtggtattgctcttacactctt +taatcttgctgacacgctcctcggtggtctgccgacagaattaatttcgtcggctgggggacagttgttcta +ctcccgccccgtcgtctcagccaatggcgagccggctgtcaaattgtatacatctgtggagaatgcgcagca +agataaggggattgctattccacatgatatagacttaggtgactctcgtgtggttattcaagattatgataa +tcagcatgagcaggatcggcccaccccttcgcctgccccgtctcgtcctttttcggtccttcgcgctaatga +tgttttatggctttc-----------------------------tcttactgctgccgagtatgac------ +cagactacatatgggtcgtctaccaacccaatgtatgtctcggatactgttacatttgt---taatgtggct +acaggagcccaggctgttgcccgctctcttgactggtctaaagttactctagatggccgccccctcactacc +at-----tcagcagtactccaaaacattttatgttc-tcccgctccgcgggaagctatccttttgggaggcc +gggacaactaaa--gctggttacccttataattataacacgactgctagtgaccagattttggttgagaatg +cagctggtcac------cgtgttgccat-ctctacttatactaccagccttgg--------------tgctg +gccctgtgtcagtttc-ggcagtcggtgtgttagccccacattcggctcttgcagttcttgaggacactgtt +gact---------atcctgcccgtg----ctcatacttttgatgatttttgtccggagtgtcgcaccc---t +tggtctgcaggggtgtgctttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattaa-tt----t--cctt--tt------tg +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355361.1/17207/1-7207 |Hepeviridae isolate HESQL014, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggctaattccgccttggcgaatgctgtggtggttcggccgtttttatcccgtgttcaaactgatattct +tattaacttaatgcaaccccggcagcttgtgttccgacctgaagtcctttggaatcatccgatccagcgagt +cattcataatgagctggagcaata---ctgccgagccc-gcgccggccgctgcctcgaggtgggcgctcatc +caagatccattaatgacaaccccaatgttctgcaccggtgctttctccgcccagttgggagagatgtccagc +gctggtactcagcccctactcgtggcccagcggccaattgccgtcgctctgcgttacgtggtttgccccctg +tcgatcgcacatactgcttcgacgggttctcccgctgcgcctttgccgctgagaccgggattgccttatact +cactgcatgacctttggccctcggacgttgcagaggctatggctcgccacggaatgacgcgcttgtatgccg +ccctccaccta-ccccctgaggtcctgttgccacctggtacctaccacacaacctcctatcttttgattcac +gacggcaaccgcgccgtcgtgacttatgagggggatactagtgcaggttacaaccacgatgtatctatactt +cgtgcatggatccgcaccactaaaatagttggtgatcatccactggtcatagagagggtccgcgccatcggc +tgccattttgttttgctcctcactgcagcccccgagccgtccccgatgccttatgttccgtaccctcgttca +acggaggtgtatgttagatccatatttggccctggt---------gggtcgccttcccttttcccatcagcc +t----------gctctaccaaatcta-catttcatgccgttccggttcatatttgggaccggctcatgcttt +tcggcgccaccttagatgatcaggccttctgctgctcgcggcttatgacctacctccgcgggattagctata +aagtgaccgttggcgcacttgtcgccaacgagggctggaatgcctcagaggatgcgctcactgctgtaatta +ccgcagcgtacctgactatctgccatcagcgctacctacgaacacaggccatctctaaaggcatgcgccggc +tagaggtcgagcatgcccaaaaattcatcacaaggctatatagctggctgtttgaaaagtc---------ag +gccgtgactacatccccggccgccagctacagttctatgcacagtgccgccgctggctctcagctggtttcc +atttggaccctagagtcctcgtttttgacgaggcggtcccctgc---cgttgccggagcttcttaaagaa-- +----ggctgccgggaaatcctgttgttttatgaagtggttggggcagga------gtgcacctgctttctgg +----------------agccagcggaaggcctggttggtgactgcggc--------catgataacgaggctt +atgaggggtctgaggtggaccccgctgagcctgttcatcttgatgtttctgggacttatgcagttcatggcc +gccaacttgaggctctatatagagcgcttaatatcccagatgacattgcggctcgcgcgtcccgcctgacgg +ctactgtggagcttgccgccatcccaggccggcttgagtgccgtacggtgcttgggaataagacctttcgta +cttcaataactgatggtgcccacctagaggctaacggccc------------------------cgaacagt +atgttttgacatttgatgattcccgtcaggcaatgggggctgggcctcacagcctcacgtacgaacttgtcc +ccgccggtctgcaggttaaaatatcttct-------aatggcctggattgtaccgccatattcccc---cct +ggtggggcaccgagtgctgcaccaagtgaggtagcggctttttgcagcgccctatacaggtacaacaggttc +acccagcgtcattcgctgaccggtgggctgtggctgcaccctgaggggctccttggtctgttcccccctttc +tccccagggcatctctgggagtctgcaaaccccttttgcggtgagagtacactttacacacggacttggtct +acatctggtttctctagcgacttctccccgcccgaggcggttcatgccgctccggtccttgacgt----agg +gctaccctcgggtgccccctcgtccgctagcgatgt-----------------ctgggtatt---------- +---------tccatcacct----tctgaagggt--------------cggcgatagctccgccgcccgatac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtaagccagctaacctgcctgga +cctgctacacctagg-------------------------------------ccccccgtttgtaagccgcc +tacgccacc--------------------------------------atcagcccgcactcgtcggc----- +-------------------tcctatatacatatcctgatggggccaaggtgtatgcaggctctctgtttgaa +tcagattgtgattggctggttaatgcatctaaccctggccaccgccccggtggtggtctctgccatgcattt +taccagcgcttcccggagtcrt------tccatccaactgacttcgtcatgcgtgaggg---tctggccgca +tacactttgagcccgcgcccgattattcatgctgtggcccccgactatagggttgagcaaaaccccaagagg +ctagaggcggcgtatcgtgagacctgttcccgcctcggcacagctgcttacccgctactggggtcggggatt +taccaggtgcctgtaggcttaagctttgacgcctgggagcgtaaccaccgcccaggcgacgaactttacctc +actgagccagcagccgcc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccggccctaacaattactgaagacaccgc +cc------------gtacagccaaccttgcgcttgagattg------------actccgctactgaggtagg +tcgtgcttgc---gccggctgcaccgttagccccggggtcgtccactaccagttcactgccggggttcctgg +ctccgggaagtctaggtctatacagcagggggatgttgatgttgtggttgttccaacccgtgagcttcgtaa +tagctggcggcgccgcggctttgctgcttttacaccccacacggcagctcgtgtcactgccggccggcgcgt +ggtgatagatgaggcaccttcgcttccaccgcatttgttattgctccatatgcagagagcctcatcggtcca +tcttctcggtgaccccaaccagatccctgctattgactttgagcatgccggtttggtcccagcgatccgccc +tgagctcgcccctactagctggtggcatgttacccatcgctgccccgccgatgtgtgtgagctcatacgcgg +ggcttacccaaaaattcagacgaccagccgtgtgctgcggtctttattttggaatgaa------cctgcggt +gggccagaggctggttttcacgcaggcagctaaggcggcaaaccctggagcaattaccgttcacgaagccca +gggtgccacgtttacagagactaccattatagccacagccgatgctcgaggtcttatccaatcttcccgtgc +acatgccatcgttgcacttactcgccacacagaaaaatgcgtcattctcgacgctcctggcctactgcgcga +ggtcggcatctctgatataattgtcaataatttc------------------------------ttcctggc +tggtg--gtgaggtgggccaccatcgcccttctattatacctcgcggtaacccagaccagaacctagacac- +-----cttacaggcattccctccgtcctgccaaattagtgcttaccaccagctggctgaggagctgggccac +cggccggccccagtagccgccgtcctgcccccctgcccagagctcgagcagggactactttacatgccgcag +gagcttacggtttccgatagtgtcctaatttttgaactcacggatatagtccactgccgtatggctgccccc +agtcaacgtaaggcggtcctttcgacgcttgtcggtaggtacggccgccgaacgaagctgtatgaagcggcc +cattctgatgttcgtgagtctttagggaggttcatcccgactatcggaccggtccaggccaccacgtgcgag +ctatatgagctggttgaggctatggtggagaagggccaagatggctctgccgtgctcgagctcgacctctgc +agccgtgatgtctcgcgtattacatttttccagaaggattgtaataaatttacaacaggtgagaccattgcc +catggtaaggtgggccagggtatttcggcttggagcaagaccttttgtgctttattcggcccgtggttccgt +gccattgagaaggagattctagctctgctcccacctaatattttctatggtgatgcttatgaggagtcagtg +ttttctgcagccatttctggggctggttccagtatg---gttttcgagaatgatttttctgagtttgatagc +actcaaaataatttttcact------------------tggccttgagtgcgttattatggaggagtgtggc +atgccccagtggcttatccgactgtaccatctagttaggtcggcctggaccctgcaggccccgaaagagtct +ttgaaaggtttttggaagaagcattctggcgagcctggtactctcctttggaacaccgtttggaacatggcg +atcatagcacattgctatgagttccgcgatttgagagtggcagcgtttaaaggggatgattcagtggttctt +tgcagtgattatcgccagagccgcaatgctgccacccttatagccggttgcgggttgaaattaaaggttgat +taccggcctgtagggttgtatgccggtgttgtggtggccccgggccttggagcgcttcctgatgttgtccgg +tttgccggtcggctatctgagaagaactggggcccgggccccgagcgcgccgaacagttgcgtctggcagtt +tgtgatttccttcgagggttaacgaatgtcgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggtcagccccgggctggtgcataaccttattggcatgctacagactattgctgatggaaaggcccattt +cactgagactgtcaagcctgtattggatcttacaaattctatcatacagaggttggaatgaataacatgtc- +t----------------tgtgcatcgcccatggg------------atcgtcatgcgccctagggctgttct +gttgctgttcctcatgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcac---- +--------------ccaaccaacccctttgccgccgatgtcgtaccacaatccggggctggagctcgccctc +gacaaccggtccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgtcgccgatctacccca---------actggggctgcgccgctaac +tgctgtttcaccagctcctgatacggccccagttcccgacgttgactctcgtggcgctatcttgcgccgcca +gtataatttgtccacctctcccttaacttcatctgttgcctctgggactaatcttgttttatatgctgcccc +gcttaatcccctcctgcctctccaagacggcaccaacacccacatcatggcgactgaagcgtctaattatgc +tcagtaccgggttgtccgggccacaatccgctatcgccctttggtgccgaatgccgtcggtggttatgcaat +ttccatttctttttggcctcagactacaactacacccacctccgttgatatgaattctattacttcaactga +tgttaggattttagtccagcctggcatagcctctgaactggtcatcccgagtgaacgccttcactaccgcaa +ccagggttggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggtctagtcatgctttg +catccatggttcccctgttaattcttataccaacacgccctatactggggcgctggggctccttgactttgc +acttgaacttgaatttagaaatctgacccccgggaacactaacacccgtgtgtcccgctacactagcacagc +ccggcatcgtttgcgccgtggtgctgatggcaccgccgagcttacaaccactgcagccacacgttttatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggtgaggtgggccgtggtatagctttaacgctatt +taatcttgctgacacacttctcggcgggctgccgacagaattgatttcgtcggctggaggccaactgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggcattgctataccgcatgatatagatttaggggactcccgtgtggttatacaagactatgacaa +ccaacatgaacaagaccggcctactccgtcaccggccccgtcccgccccttttcagtccttcgaaccaatga +tgtcttatggctttc-----------------------------tctgaccgcggctgaatatgac------ +cagactacctatggctcgtcgaccaaccccatgtatgtctcagatactgtcacttttgt---taatgtggca +acaggtgctcaggccgttgcccgttcccttgactggtctaaggtcactttggatggccgcccacttaccacc +at-----ccagcagtactctaagacgttttatgtgc-tgccacttcgcggcaagctttcyttttgggaagcc +ggtacgactaag--gctggttacccttataattataatactactgctagtgatcagattctgattgagaacg +cagccggacac------cgtgttgccat-atctacatacactactagtcttgg--------------cgccg +gccctgtatccgtttc-cgcggtcggcgttcttgccccgcattccgctttagctgtgcttgaagatactatt +gact---------atcccgcccgtg----ctcatacttttgatgacttctgccctgagtgccgtaatc---t +cggcctccagggctgcgcttttcagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattaa--t----tc-ttc--ctt------gt +gccc-cct--------tc-taag-ct-tt----ac-tc-tgt----------------tatttt-------c +ttttttct----gcgg--------------ttc--------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355362.1/17165/1-7165 |Hepeviridae isolate HESQL133, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggctaattctgccctggcgaatgctgtggtggtccggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagttggttttccgacctgaagtgctctggaatcatcctatccaacgggt +tatccataatgaacttgaacaata---ttgtcgggccc-gggctggtcgttgtctagaagttggggcccacc +caagatccatcaatgacaacccaaatgttctgcaccggtgctttctacgaccagttgggagagatgttcagc +gctggtactctgctcccacccgtggccctgcggctaattgccgccgttctgccttgcgtggcctcccccctg +ttgatcgtacctattgttttgatggattctcccgctgctcatttgccgcagaaaccggggttgccctttatt +ctctgcatgacctctggccggccgatgttgctgaggctatggcccgacacgggatgacacgcttatatgctg +cactacatctt-ccccctgaagtactactaccacccggtacttaccacacaacctcataccttctgattcac +gacggtgaccgtgctgttgtgacctatgaaggtgacactagtgcaggctacaaccatgatgtctccatactt +cgtgcatggatccgcacaactaagatagttggtgatcatccgctggtgatagagcgtgtgcgggctattggc +tgccattttgtgcttctgcttacagcagcccctgaaccgtcaccaatgccttatgttccatacccccggtcg +acagaggtgtatgtccgctctatattcggtcctggc---------gggtccccgtctctattcccatcagct +t----------gctctacgaaatcca-catttcacgctgtcccggttcatatttgggaccggctcatgcttt +ttggcgctactctggatgatcaggcattttgctgttcacggcttatgacctacctccgcgggattagttaca +aggtcactgtcggcgcccttgtcgctaatgaggggtggaatgcttcggaggacgctcttaccgctgttatta +ctgcagcgtatctgaccatttgccatcagcgttacctccgtacccaagctatatccaagggtatgcgccgac +tggaggttgagcacgcccaaaaatttattacaagactttatagttggctgttcgagaagtc---------cg +gccgtgactatatccccggccgccagctccagttttatgcacagtgccgccgttggctatcggcgggtttcc +atcttgacccaagggtgcttgtttttgatgagtctgtgccctgc---cgttgtaggacatttcttaagaa-- +----ggctgcgggtaagttctgctgttttatgaagtggttgggacagga------gtgcacctgcttcttgg +----------------aaccagcagagggtctagttggcgaccatggt--------catgataatgaagcct +atgagggctctgaggtcgatcaggccgagcctgcccatcttgatgtttctgggacttatgccgtccatggcc +gccaacttgaggccctgtatagggcgcttaatatcccgcatgacatcgctgctcgagcctcccgtttgactg +ccaccgtcgaacttgttgcaggtccagatcgcttggagtgccgcactgtgctcgggaataagactttccgga +cgacggtggttgatggtgcccatcttgaggcgaacggccc------------------------cgagcagt +acgttctttcgtttgacgcttctcgccagtctatgggggccgggccgcatagtctttcttatgagctcactc +ctgctggtttgcaggtcaagatttcatct-------aatggcctggactgcactgcaacattcccc---ccg +ggcggcgcccctagcgctgccccgggggaggtagcagccttttgcagtgccctttacaggtataataggttc +actcagcgccattcgcttataggcggcttgtggctgcatcctgaggggttgttgggtatcttcccccctttc +tctcccgggcacctttgggagtccgctaaccctttttgtggggagggaaccttgtacacccgaacatggtca +acatctggtttctctagtgacttttccccccctgaggcagccgtcgcagcgccggctgccactcc----ggg +gttatacc---accctacacctcctactagtgacat-----------------ttgggtgtt---------- +---------accgccacct----tctgaagaac--------------tccaggttgacacagcgcccgctcc +ccccg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcccgctcaaccatctagc +cctgctgggccaaaa-------------------------------------gctcccgtgcgtaagccgcc +aacaccacc--------------------------------------atccccgcgcacccgccgcc----- +-------------------ttctttacacctatccggatggggcaaaggtgtacgcggggtcactgtttgag +tccgactgtgattggctggtcaatgcgtcgaatcccggccatcgtcctggaggcggcctttgccatgctttc +taccaacgctaccccgagtctt------tccacccaactgagtttatcatgcgcgatgg---tcttgccgcg +tatactttaactccccggcctattattcatgcagtggcccctgactatagggttgagcataaccctaagagg +cttgaggcagcataccgagagacttgctcccgccgcggtaccgccgcttatccactcctcggctcgggcata +taccaagtccccgttagcctcagctttgacgcctgggagcgtaaccaccgccccggggatgagctctaccta +accgaccccgccgctacc-------------------------------------------------tggtt +tgaggctaataagccaataca--------------------------------------------------- +------------------------------------------gccggccctcacaataactgaggatgcagc +cc------------gcacagccaacctggcactggagatcg------------atgctgctacggaggtcgg +ccgggcttgt---gccggctgtgcagttagccctggggttgtgcactatcagtttactgctggggtcccagg +ttcggggaagtcgcgttctatacagcagggggatgttgacgttgtggttgttcccactcgggagctccggaa +tagttggcgtcgccggggttttgcagcttttacacctcatacggcggcccgtgtcaccacgggccgtcgtgt +tgtgattgatgaggccccatctcttccaccgcatttgttgctactgcacatgcagcgggcctcgtcggtcca +ccttctcggcgacccaaaccagatccctgccatagacttcgagcatgccggcctggtccccgctatacgccc +tgagctggcgcccaccagttggtggcatgtcacccatcgctgccccgctgatgtgtgcgagcttatacgtgg +ggcttatcccaaaatccaaaccactagccgcgtgctgcggtctttattctggaatgag------cctgctat +tggccagaagttagttttcacccaggctgctaaggccgccaaccccggtgcgatcacagtccacgaggccca +gggcgccactttcacggaaactacaatcatagccacggctgatgctagggggctcatccaatcatcccgagc +tcacgccatagtcgcacttacccgccacacggagaagtgcgttattcttgatgcccctggcttgttacgcga +ggttggtatatcggatgtgattgttaacaatttc------------------------------tttctcgc +cggcg--gggaggtgggtcaccatcgcccctctgtgatacctcgtggtaaccctgaccagaaccttgcgac- +-----actacaggcctttccaccttcctgccagattagtgcctatcaccagttagctgaggaacttggccac +cgcccagctcccgtcgccgctgtcctgcccccttgccctgaacttgagcaaggtttgttatatatgccgcag +gaactcacggtgtctgatagcgtgctggtctttgaactcacggacatagtccactgccggatggctgccccc +agccagcggaaggccgtcctatcgacgctcgtgggtaggtatggccgccggacgaagctgtacgaggcagcc +cactctgacgtccgtgagtccctggctagatttatccccaccatcgggcccgttcaggctactacgtgtgag +ttatatgagctggttgaggccatggtggagaaaggtcaggatggttctgccgtgcttgagctcgacctctgc +aatcgtgatgtatcgcgtatcacatttttccagaaagattgtaacaaattcaccacaggggagaccattgcc +cacggtaaggttggccagggcatctcggcttggagtaagaccttctgtgccctgtttggtccgtggttccgt +gctattgaaaaagaaatactagccctgctcccgcctaatattttctacggtgacgcatacgaggaatctgtg +tttgccgccgctgtgtcaggggcaggttcaagcatg---gtatttgagaatgatttttcagagtttgatagc +acccaaaataacttctctct------------------tggtctcgagtgtgtagttatggaggaatgtggc +atgccccagtggctaatccggttgtaccatttggttcggtcggcctggatcctacaggcgccgaaagagtct +cttaagggattttggaagaagcattctggtgaaccaggcaccctcctctggaacactgtctggaacatggcg +atcatagcacattgctatgaatttcgtgattttagggctgccgctttcaagggagatgattccgtggtcctt +tgtagtgactaccgtcagagccgcaacgcagcggccctgattgcaggttgcgggcttaaactaaaggttgat +tatcgccctattgggttgtatgctggtgtggtggtggcccctggcctggggacgctacccgatgtggtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggctgagcagttgcgcctagctgtc +tgtgacttccttcgagggttaacgaatgttgcgcaggtatgcgtcgatgttgtgtcccgag-------ttta +tggagttagccctgggttggtacataaccttattggcatgttacaaaccatagctgatggcaaagcccattt +tacagagactgtcaaacctgtgcttgacctcacgaattctattatacagcggatggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcatcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggtc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtaccgcaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgtcccacgccgtcgatctgcccca---------gctggggctgcgccgttgac +cgccatatcacctgcccccgatacagctcccgtacctgatgttgactcgcgcggcgccatattgcgccgcca +gtacaatctatctacatctccgctcacatcatctgtcgcttctggtactaatctggttctttatgctgcccc +gctaaatcctttgctgccccttcaggacggcaccaatactcacatcatggccactgaggcatctaattatgc +ccagtatcgggttgtccgggctacgattcgttacaggccattggtgccaaatgctgttggcggctatgcaat +atctatttcattctggcctcagaccactaccactcccacgtctgttgacatgaactctattacttccactga +tgttaggattctagttcagcccggtattgcttctgagttggttatccccagtgagcgcctccattatcgtaa +ccagggctggcgttctgtggagacctcgggtgtggctgaagaggaggctacttctggtttggtaatgctttg +tatccatggctctcctgttaattcctacaccaataccccctataccggggcacttggactccttgattttgc +tttagagcttgagtttaggaacctgacacccgggaacaccaacacccgtgtgtcccggtatacaagcacagc +ccgtcatcggctgcgccgcggtgccgatggcactgccgagcttaccaccacagcggccacgcgcttcatgaa +ggacctgcacttca---ccggtacgaat---ggggtcggtgaggtgggtcgtggtattgctctcacactctt +taatcttgctgacacgcttctcggcggcttgccgacagaattaatttcgtcggcagggggacagttattcta +ctcccgtcctgtcgtctcagccaatggcgagccgactgtcaagttatacacatctgtagagaatgcgcagca +ggataaagggatcgctattccacatgacatagacctgggtgactcccgtgtagtcatccaggactatgacaa +ccagcatgagcaggatcgacccaccccctcgcctgccccttctcgccccttttcagttcttcgcgctaacga +tgttctatggctttc-----------------------------ccttactgccgccgagtacgac------ +cagactacatatgggtcgtccaccaacccaatgtatgtctcggatactgtcacatttgt---caacgtggct +acaggagcccaggctgttgcccgttccctcgactggtctaaagttactctggacggccgccctcttactact +at-----ccagcagtattccaaaacattttatgttc-tcccgcttcgcgggaagttatctttctgggaggcc +gggacgactaag--gctggttacccctacaattacaacacaactgctaatgatcaaaatcttattgaaaatg +ccgccggacat------cctggtgctat-ttccacgtataccaccaaccttgg--------------cgctg +gccctgaggctggctc-agcartccgtgttttaaccccacattcggcccttgaagtccttgaagaaacaaat +gaat---------accctgcccgtg----cccacccttttgaaaatttttgcccggaatgtcccgctc---c +tggtttgcaggggggggccttccagtc--------taataacgctaaaattccgcgccc------------- +--------taaaatgaaggtaagaaaaacccgggagttttaaacaa-tt----t--cctt---t------ga +accc-cct--------t------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355363.1/17252/1-7252 |Hepeviridae isolate HESQL142, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatcccgtgtccaaactgatatcct +tatcaatttgatgcaacctcgacagcttgtgttccggcccgaagtcctttggaatcatccgatccagcgagt +tatacataatgagctggagcagta---ctgccgagccc-gcgctggccgctgtcttgaagtgggcgcccacc +caagatctattaatgacaaccctaatgttttgcaccggtgctttcttcgcccggttggaagagacgtccagc +gctggtattctgcccccactcgtggtccagcggctaattgtcgccgttccgcgctgcgcggtttgccccctg +tcgaccgcacatactgcttcgacgggttttcccgctgcgccttcgctgctgagaccgggatcgctttatact +cactgcatgacctttggccttcggatgttgcggaggctatggctcgccatgggatgacgcgcttgtatgccg +ccctccaccta-ccccctgaagttctgttaccacctggaacttaccacacaacctcttatcttttgattcac +gacggcaatcgtgccgtcgtgacttatgagggggatactagtgcgggttataaccacgatgtgtccatactt +cgtgcatggattcgcaccaccaagatagttggtgatcacccgctggtaatagagcgggtccgcgccattggc +tgccattttgtcttactccttactgcagcccccgagccgtccccaatgccttatgtcccgtaccctcgttca +acagaggtgtatgttagatccatatttggccctggc---------gggtcgccttctcttttcccatcagcc +t----------gctctaccaagtcta-cattccatgccgtcccggtccatatctgggaccggcttatgcttt +ttggtgccaccttagatgatcaggccttttgctgctcgcggctcatgacctacctccgcgggattagttata +aagtgaccgttggcgcacttgtcgccaacgaaggttggaatgcctcagaggatgcgctaaccgctgtgatta +ctgcagcgtatttgactatttgccatcagcgctacctacgaacccaggccatttctaagggtatgcgccggc +tagaggttgagcacgcccaaaagtttatcacaaggctatatagctggttgtttgaaaagtc---------ag +gtcgtgattacatccccggtcgccagctccaattttatgcgcagtgccgccgttggctctcggctggcttcc +atctggaccctagagttctcgtctttgatgaggcggtcccctgc---cgatgccggagttttctaaagaa-- +----ggccgccggaaaattttgctgctttatgaagtggctggggcagga------gtgtacctgcttcttgg +----------------agccagcggaaggcctggttggtgattgtggc--------catgataacgaggcct +acgaggggtctgaggtggaccctgccgagcctgctcaccttgatgtctctgggacttatgcggtccacggcc +gtcagcttgaggccctgtatagagcgcttaatatcccagatgacattgcagcccgtgcgtcgcgtctgacgg +ccaccgtggagcttgccgccagcccaggcagactcgaatgccgcacggtgcttgggaataagaccttccgta +catcaataactgatggagcccacctcgaggccaacggtcc------------------------tgagcagt +atgtcctgacatttgatgattctcgccaagtgatgggggctgggcctcacagcctcacgtatgaacttgtcc +ctgctggtctgcaggttaaaatatcttct-------aacggcctggattgtaccgccatattccct---cct +ggtggggtgccgagcgcagcaccaggtgaagtggcggctttctgtagtgccctatacagatacaataggttc +acccagcgccattcgctgactggcgggctgtggttgcaccctgaggggctccttggcctgttcccccctttc +tccccggggcatctttgggagtctgcaaatcccttttgcggtgagagcacactttatacacgaacttggtcc +acatctggtttttctagcgacttctccccacctgaggcggcctatgccgccccagtccctgacat----ggg +gttgacctcgggcgccccctcctccgctagtgatat-----------------ctgggtgtt---------- +---------cccaccaccc----tctgaggggt--------------cggcgatcattccgccacccacaac +cccggtcggtaagccatctaa---------------------------------------ttcccc------ +------------------------------------------------------------------------ +-tggtcatac-------------------------------------------------------------- +-------------tacgccc----aggccacttgcttatgagccgtctacaccaccaccgaccctgacccca +g---------------------------------------------ttagtaagccagctaatccgcctagc +cttactgcacctagg-------------------------------------ccccccgttcgcgagccgtc +cacaccgcc--------------------------------------atcggctcgcactcgccggc----- +-------------------ttctttacacataccctgatggggccaaggtgtatgcgggctctttgtttgag +tcagattgttactggctggttaatgcatctaaccccggccaccgccccggtggtggtctctgccatgctttc +taccagcgcttcccagagtcgt------ttcatccgaccgattttgtcatgcgcgaggg---tctcgccgca +tatactctgagcccgcgtccgatcattcatgctgtggcccctgactacagggttgagcaaaaccccaagagg +ctggaggcggcatatcgtgagacctgctcccgcctcggcacagctgcctacccactgctggggtcagggatt +tatcaggtccctgtaggtctaagctttgacgcctgggagcgtaatcaccgcccaggcgatgaactttacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagcctactca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacaccgc +cc------------gtacagccaaccttgcgcttgagatcg------------actccgccactgaggttgg +tcgtgcctgc---gccggctgcactattagccccgggattgtccactaccagttcaccgccggggttcctgg +ctccgggaagtctaggtctatacagcagggggatgttgatgttgtggtcgtgccaacccgcgagcttcgcaa +tagttggcggcgccgcggctttgctgctttcacacctcacacagcagctcgtgtcaccgccggccggcgtgt +ggtgatagatgaggcaccttcgcttccaccgcacctgctgttgctccacatgcagcgagcctcatcagttca +tcttcttggcgatcccaatcagatccctgccattgactttgagcacgccggtttggtcccggcgattcgccc +tgagctagctcctactagttggtggcatgtcacccaccgttgccccgccgatgtatgtgagctcatacgcgg +ggcctatccaaagattcagacgaccagccgtgtgctgagatctctattctggaatgag------cctgcgat +aggccagaggctggtttttacgcaggcagccaaggccgccaatcccggcgcaattaccgttcacgaggccca +gggggccacgtttactgagactaccatcatagccacggccgacgctagaggtcttattcaatcttctcgcgc +acatgccatcgttgcacttactcgccatacagaaaagtgcgttattctcgatgctcccggcctattgcgtga +ggttggcatttctgatataattgtaaataacttt------------------------------ttcttggc +tggtg--gtgaagtgggtcaccaccgcccttctaccatcccccgcggcaacccagatcggaacttagacac- +-----cctccaggcgttccctccgtcctgccaaatcagcgcttatcaccagttggctgaggagctgggccac +cggccggccccagttgccgccgtcctgcccccctgccctgagcttgagcaggggttactctacatgccgcag +gagctcacggtgtccgatagtgtcctaattttcgaactcacggatatagttcactgccgtatggccgcccct +agccaacgtaaggcggttctttctacgcttgtcggcaggtacggccgccgaacgaagttgtatgaagcggcc +cactctgatgtccgcgagtctttagggaggttcatccccactatcggaccggtccaggccaccacatgtgag +ctatatgaactggttgaggccatggtggagaagggccaggatggttccgctgtgcttgaacttgacctttgc +aaccgtgatgtctcgcgcattacattcttccagaaggattgtaacaaatttacaacgggtgagactattgct +cacggtaaggtgggtcaggggatttcggcttggagtaaaaccttctgtgctttattcggcccgtggttccgt +gccatcgagaaagagattctggctctgctcccacctaatattttctatggcgatgcctatgaggagtcagtg +ttctctgcggccatttctggggctggctccagtatg---gtttttgagaatgatttttctgagtttgacagc +acccaaaataatttctctct------------------tggccttgagtgcgttattatggaggagtgtggc +atgccccaatggcttattcgactgtaccatttagttagatcagcctggattctgcaagccccgaaagagtct +ttgaaaggcttctggaagaagcattccggcgagcctggcactctcctttggaacaccgtctggaacatggcg +atcatagcacactgctatgagttccgtgacctgagagtggcagcgtttaaaggggatgattcagtggttctt +tgcagcgattaccgtcagagccgtaatgcggccactctgatagccggttgtgggttaaaattgaaggttgat +taccggcctataggtttgtatgccggtgttgtagtggctccgggcctcggggcacttcctgatgttgtccgc +tttgcaggtcgactatctgagaagaattggggcccgggccccgagcgcgccgaacagttgcgcctagcagtt +tgtgatttccttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccctgggctggtgcataaccttattggcatgctacagactattgctgatggaaaggcccattt +tactgagactgttaagcccgtgctggaccttacgaactctatcatacagaggttagaatgaataacatgtt- +c----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcagtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaatccggggctggagctcgcccta +gacagccggtccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgttgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtttcaccagcgcctgatacagccccagtccctgatgttgactctcgtggcgctattctgcgccgtca +gtataatttgtccacctctcctttaacctcatctgttgcctctggaactaatcttgttttgtatgctgcccc +gcttaaccctctcctgcctcttcaagacggcaccaatactcatatcatggcgactgaggcgtctaattacgc +ccagtaccgggttgtccgggctacaatccgctatcgccccttggtaccgaatgccgtcggtggttatgcaat +ttctatttctttctggcctcagactacaactacacccacctctgttgatatgaattctattacttctactga +tgttaggattttagtccagcctggcatagcttctgaattggtcatcccgagtgagcgccttcactatcgtaa +tcagggctggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggcttggtcatgctttg +tattcatggctcccctgttaattcttataccaacacgccctatactggggcgctggggcttcttgattttgc +actcgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgttatactagtacagc +ccggcaccgcctgcgtcgcggcgccgatgggacagctgagcttacaaccactgcagccacacgttttatgaa +ggacttgcacttca---ccgggacaaat---ggtgttggtgaggtaggtcgtggtatagccctaacgctgtt +taatcttgccgatacacttctcggcgggttgccgacagaattgatttcgtcggccggaggccaactgtttta +ctcccgcccggttgtctcagccaatggcgagccaactgttaagttatacacctctgtcgagaatgcacagca +ggataagggtattgctataccacatgatatagatctgggggattcccgtgtggttatacaagattatgacaa +ccaacatgaacaggaccggcccaccccgtcgccggccccatcccgtcccttctctgtccttcgggccaatga +tgtcttgtggctctc-----------------------------tttgactgcagctgaatatgac------ +cagactacttatggctcgtcgaccaatcctatgtatgtttcagacactgtcacatttgt---taatgtggcg +acaggcgcccaggctgttgcccgatctcttgattggtccaaggtcactctggacggccggccacttactacc +at-----ccagcagtactctaagacattttatgtgc-tgccgcttcgtggcaagctttccttttgggaagct +ggtacgactaag--gctggctacccttataattacaacactactgctagtgaccaaattctgattgagaacg +cagccggtcac------cgtgttgctat-atctacttacactactagtcttgg--------------cgccg +gccctgtgtctgtttc-tgcagtcggcgttcttgccccgcactctgctttagctgtgcttgaagatactatt +gatt---------accccgcccgtg----cccatacttttgatgatttctgccctgagtgccgcaacc---t +cggcctacagggctgtgctttccagtc--------tactattgctgagcttcagcgcct------------- +--------taaaatgaatgtaggtaagacccgggagtcttaattaa-tt----cc-y-c--tkt------gt +gccc-c------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355366.1/17236/1-7236 |Hepeviridae isolate HESQL043, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +agcggctaattccgccttggcgaatgctgtggtggtccggccgttcttatcccgtgttcagactgatatcct +catcaatttgatgcaaccccggcagcttgtattccggcctgaagtcttttggaaccacccgattcagcgtgt +catacataacgaattggagcagta---ctgccgggccc-gcgctggtcgttgccttgaagtcggcgcccatc +cgagatccattaatgacaatcctaatgtcctgcaccggtgctttcttcgcccggttggtagagacgtccagc +gctggtattctgcccccacccgtggtccagcggctaactgccgccgttctgcgcttcgcggcttgccccctg +ccgatcgcacatactgcttcgatgggttttctcgttgtgcttttgccgctgagaccgggatagctttatatt +cactgcatgacctctggccttcggacgttgcggaggccatggcccgccacggcatgacgcgcttgtatgctg +ttttacactta-ccccctgaggtcttgttaccacctggcacttatcacacaacctcctatctcctgattcac +gatggcgatcgtgccgtcgtgacctatgagggagacaccagtgcaggctataaccacgatgtatctatactt +cgagcctggattcgcaccacaaaaatcgtcggtgaccacccactggtgatagagagggtccgtgccatcggc +tgccactttgttttgctcctcactgcagcccctgagccatcccctatgccttatgttccttaccctcgctca +acagaggtgtatgtcaggtccatatttggccctggc---------gggtcgccgtcgctctttccatcagcc +t----------gctctactaaatcta-cattccatgctgtcccggttcatatttgggaccgactcatgcttt +ttggcgccaccctagatgaccaggccttctgttgctcgcggcttatgacctatctccgcgggattagctata +aagttaccgttggtgcacttgttgccaacgagggttggaatgcttcggaggatgcactcaccgctgtgatta +cagcagcatatctgacaatttgccatcagcgctacctccgaactcaggccatttctaaaggtatgcgccggc +tagaggtcgagcacgcccaaaaatttattacaaggctatatagttggctatttgagaaatc---------ag +gccgtgattatattcccggccgccagcttcagttctatgcacagtgccgccgttggctctcggctggcttcc +atctggatcctagggtccttgtttttgatgaggcggtcccctgc---cgctgccggagcttcctgaagaa-- +----ggtcgccggcaaattctgttgctttatgaaatggctgggacagga------gtgcacctgttttctgg +----------------agccagcggaaggtctggttggcgactgtggc--------catgacaatgaggcct +acgagggatccgaggtggaccctgccgagcctgctcatcttgacgtttccgggacctatgcggttcatggcc +gtcagcttgaggctctatatagagcgttaaacatcccacacgatatcgcggcccgcgcgtcacgtttgacgg +ctactgtggagcttgctgccagcccaggccgacttgagtgccgcacggtgctcgggaataagactttccgca +catcgataactgacggcgcccatctcgaggccaacggtcc------------------------cgagcagt +acgtcctaacatttgatgactctcgccaagcaatgggggcaggatctcacagcctcacatacgaacttgtcc +ctgctggtctgcaggtcaaaatatcttcc-------aatggcttggattgtactgcagtattcccc---cct +ggcggagcgccaagcgctccgccaggtgaagtggcggctttttgcagtgctctatacaggtacaataggttc +acccagcgccattcgctgaccggcgggctgtggctgcatcctgaggggctccttggtttgttcccccctttc +tcccctgggcacctctgggagtctgcaaacccgttctgcggtgagagcacactttatactcgaacttggtct +acatccggtttttccagtgacttctccccacccgaggcggctattgccgccataggccttgacac----ggg +gttgcccccgggcaccccttcttctgctagtgatgt-----------------ctgggtgct---------- +---------cccgccgccc----tctgagaggt--------------cggcgattgtctcgccacctgaaac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctagtaagcctgctaatccacctagt +cttgctgcacctaaa-------------------------------------cctcctgttcgtaagccgcc +ttcgccacc--------------------------------------gccggcccgcacccgtcggc----- +-------------------tcctctacacttaccctgacggggctaaggtgtatgcaggctccctgtttgag +tcagattgtgattggctggttaatgcgtctaaccccggccaccgccctggtggtggcctctgccatgcattt +taccaacgctttccagagtctt------tccacccgactgattttgtcatgcgtgaggg---tctcgctgca +tacactctgagcccgcggcctatcatccatgctgtggctcctgattatagggttgagcagaacccaaagagg +ctggaggcagcatatcgtgagacttgttcccgtctcggtacagctgcctatccgttgctggggtcggggatc +taccaggtccctgtaggcttgagtttcgacgcctgggagcgtaaccaccgcccaggtgacgagctttacctc +accgagccagctgctgcc-------------------------------------------------tggtt +tgaagccaataagccaaccca--------------------------------------------------- +------------------------------------------accggccttaacaatcaccgaggacaccgc +cc------------gtacggctaacctcgcgcttgagattg------------actcagctaccgaggttgg +tcgcgcttgc---accggttgtacagttagccccggggttgttcattaccagttcaccgccggagttcccgg +ctccggaaagtctagatctatacagcaaggggatgtcgatgttgtggtcgtaccaacccgtgagcttcgcaa +tagctggcggcgccgtggctttgcagctttcacaccccacactgctgctcgtgtcactgctggccggcgtgt +tgtgatcgatgaagcgccttcgctcccaccgcacttactactgctccatatgcaaagagcctcatcagtcca +ccttcttggtgatcctaaccagattcctgccatcgactttgagcacgccggtctggtcccggcgatccgccc +tgagctcgcccctactagttggtggcatgtcacccatcgctgtcctgccgacgtatgtgagctcatacgcgg +ggcttacccaaagatccagacgactagccgtgtgatgcgatctctgttttggaatgaa------cctgcagt +gggtcagaagttggtatttacgcaggcagctaaggcggccaaccccggtgcaattactgttcacgaggccca +gggtgccacgtttacagagactactatcatagctacggccgatgctagaggccttattcaatcttctcgcgc +acatgctatcgttgcgcttacccgtcatacagaaaagtgtgtcatccttgacgctcctggcttattgcgtga +ggtcggtatttcggacattattgttaacaacttt------------------------------ttcctggc +tggag--gtgaggtaggtcaccaccgcccttcaaccataccccgtggtaacccagaccgcaatttagatac- +-----cctgcaagcgttccccccttcttgccaaattagtgcctaccatcagttggccgaggagctgggccac +cggccggccccagtggctgccgttttgcccccctgccctgagcttgagcagggcctactttatatgccacag +gaactcacagtgtctgatagtgttttagtttttgagctcacggacatagtccactgccgtatggccgccccc +agtcaacgtaaggcggtcctctcgacgcttgttggcagatacggccgtcgaacaaagttgtatgaagcagcc +cattccgatgtccgtgagtccctagggagattcatccctactatcgggccagtccaagccaccacgtgtgag +ttatatgagttagttgaggccatggtggagaagggtcaggacggttccgctgtgcttgagctcgacctctgt +agccgcgatgtctcgcgtattacatttttccagaaggactgtaataagtttacaacaggcgagactatcgcc +catggcaaggtgggccagggtatttcggcttggagcaaaaccttctgtgccctatttggcccgtggttccgt +gccattgagaaagagatcctggctctgctcccgcctaacgtcttctatggcgatgcctatgaggagtcagta +ttttctgcagccatctctggagcgggttccagtatg---gtctttgagaatgatttctctgagttcgatagt +acccaaaataacttctccct------------------tggcctagaatgtgttattatggaggagtgtggc +atgccccagtggcttattcgactgtatcatctagttagatcagcctggaccctgcaagccccgaaagagtct +ttgaaaggtttttggaagaagcattccggcgagcctggtactctcctttggaacactgtctggaacatggcg +atcatagcgcattgctatgaattccgtgacctgagagtggcagcgtttaaaggggatgactcagtggttctt +tgcagtgattaccgccagagccgtaatgcggccaccctgatagccggctgtggattgaagctgaaggttgat +tatcgccctataggtctgtatgctggtgttgtggtagctccgggcctcggggcactccctgacgttgtccgg +tttgccggtcgactatctgagaagaactggggcccgggccctgaacgtgccgaacaattacgcctagcagtc +tgtgacttcctccgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtctcgtg-------tcta +tggggttagtcccgggctggtacataaccttattggcatgctgcagacgattgctgatggaaaggcccactt +tactgagaccgtcaggcccgtattggatctgacaaattctatcatacagaggttggaatgaataacatgtt- +c----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaacccgggactggaactcgccctc +gacagccggcccg---------------tcccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgctccccgtcgtagatctacccca---------gctggggctgcgccgttaac +tgctgtttcaccggcgcctgatacagctccggtccctgatgttgactctcgtggtgctattctgcgccgcca +gtataatctatctacctcccctctgacttcatctgtcgcctctggaactaatcttgtcctatacgctgctcc +gcttaatcccctcctgccccttcaagacggtaccaatactcatatcatggcgactgaagcgtccaactatgc +tcagtaccgagtcgtccgggctacaatccgctatcgccctttggtgccgaatgctgtcggtggttatgcaat +atctatttctttctggccccaaaccacaactacacctacctctgttgacatgaattctattacttctactga +tgttaggatattagtacagcctggtatagcctctgagttggtcatcccgagtgagcgccttcactaccgtaa +tcagggttggcgctctgtcgagacctcgggtgtggctgaggaggaggcgacatcaggcctggttatgctttg +tatccatggttcccctgttaactcctacactaacacgccctatactggggcattgggacttcttgactttgc +acttgagcttgagtttagaaatttgacccccgggaacactaacacccgtgtgtcccgctataccagcacggc +ccgacatcgcctgcgccgtggtgccgatgggacggccgagcttacaactactgcagctacacggtttatgaa +ggacctgcacttta---ccggaacgaat---ggtgttggcgaggtgggtcgtggtatagctctaacgttatt +caatcttgctgacacacttctcggcgggttgccgacagaattgatttcgtcggctggaggccagctatttta +ttcccgcccagtcgtctcagccaatggcgagccgactgtaaagttatacacctccgtcgagaatgcacagca +ggacaagggtattgctataccacacgatatagacttaggggactcccgtgtggttattcaggattatgataa +tcaacatgaacaggatcggcctaccccgtcaccggccccgtcccgtcctttttcggtcctccgagccaatga +tgtcctgtggctctc-----------------------------tttgactgcagctgaatatgac------ +cagaccacctatggctcgtcgactaaccccatgtatgtttctgatactgtcacatttgt---taatgttgcc +acgggtgcccaggctgttgcccgctctcttgattggtccaaggtcactttagatggtcggcctcttacaacc +at-----ccagcagtactctaagacattctatgtgt-tgccgcttcgtggcaagctttccttttgggaggct +ggcactactaag--gccggctacccctataattataatacaactgctagtgaccagattttgattgagaatg +cagccggccac------cgtgtagctat-ttctacttacacaactagtcttgg--------------tgctg +gccctgtgtcagtttc-tgcggtcggcgtactcgccccgcactccgctttagctgtgcttgaagacactatt +gatt---------accctgcccgtg----cccatacttttgatgacttttgtcctgagtgccgtaatc---t +cggcttacagggctgtgcctttcaatc--------tactgtcgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-c-c--ctt------gt +gccc-cct--------tc-t-aa-tt-tt----at-cc-tgt----------------tatt-t-------c +tttct-tct---gcgg--------------ttccccgccccccgg---------------------aaaaaa +aaaaaaa---------------aaaaaaa------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355367.1/17196/1-7196 |Hepeviridae isolate HESQL041, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattacaactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagttggttttccgacctgaagtgctctggaatcatcctattcaacgggt +tatccataatgaacttgaacagta---ctgtcgagccc-gggctggtcgttgtctagaggttggggcccacc +caagatccattaatgacaacccgaatgttctgcaccggtgcttcctacgcccagttgggagagatgtccagc +gctggtactctgctcctacccgcggccctgcggctaactgccgccgttctgccttgcgcggcctcccccccg +ttgatcgtacctattgttttgatggattctcccgctgctcatttgccgcagaaactggggttgccctttatt +ctttgcatgacctctggccggccgatgttgcggaggctatggcccgacacgggatgacacgcttgtatgccg +cactacacctc-ccccctgaagtactactaccacccggtacttatcatacaacttcataccttctgattcac +gacggtgatcgtgctgttgtgacctatgaaggtgatactagtgcaggctacaaccatgatgtctccatactt +cgtgcatggatccgcacaactaaaatagtcggcgaccatccgctggtgatagagcgtgtgcgggccattggc +tgccattttgtgctgctgcttactgcagcccctgagccgtcgccaatgccatatgttccatatccccggtcg +acagaggtgtatgtccgctctatattcggccctggc---------gggtccccatccctattcccatcagct +t----------gctctacgaaatcta-cattccacgctgtcccagtccatatttgggaccgactcatgcttt +ttggcgctactctggatgatcaggcgttttgctgttcacggcttatgacctatctccgcgggatcagttaca +aggtcactgttggcgcccttgtcgctaatgaggggtggaatgcttcggaggacgctcttactgctgttatta +ctgcagcgtatttgactatctgccatcagcgttacctccgtactcaagcaatatccaagggtatgcgccgat +tggaggttgagcatgcccaaaaattcatcacaagactctatagttggctgttcgagaagtc---------tg +gccgtgactatattcctggccgccagctccagttttatgcacagtgccgccgttggctatcggcgggtttcc +atcttgacccaagggtgcttgtttttgatgagtctgtgccctgc---cgctgtcggacgtttcttaagaa-- +----ggctgtgggtaagttctgctgttttatgaagtggctcggacagga------gtgcacctgttttctag +----------------aaccagcagagggtctagttggcgatcatggc--------cacgataatgaagcct +atgagggctctgaggttgatcaggccgagcccgcccatcttgatgtttctgggacttatgccgtccatggcc +gccaacttgaggccctgtacagggcactcaacgtcccgcaagacattgttgcccgagcctcccgtttgactg +ccaccgtcgagctcgttgcaggccctgatcgtttggagtgccgcaccgtgcttgggaataagactttccgga +cgacggtggttgatggcgcccatcttgaggcgaacggccc------------------------cgagcagt +acgttctttcgtttgacgcctcccgccagtctatgggggccgggccgcatagtctcttctacgagctcaccc +ctgctggtttgcaggttaagatttcatct-------aatggcctggattgcactgcaacattcccc---cca +ggcggggcccctagcgccgatccgggggaggtggcagccttttgcagtgccctttacaggtacaacaggttc +actcagcgtcattcgcttataggtggcttgtggctgcatcctgaggggttactgggtatcttcccccctttt +tctcccgggcacctttgggagtccgctaatcctttttgtggagagagaactttgtacacccggacatggtca +acatctggtttctctagtgacttttccccccctgaggcagccgtcgcagcgccggctgctacttc----agg +gttatgcc---accctacacctcctgttagtggcat-----------------ttgggtgtt---------- +---------accgccacct----tctgaagaat--------------ttcaggttgacacagcgcccgctcc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cctctgagcccgctcgaccatctagc +cccgctgggtcaaag-------------------------------------gctcccgtgcgtaagccgcc +aatgccacc--------------------------------------acccccgcgcacccgccgcc----- +-------------------tcctttacacttatccagatggggcaaaggtgtatgcggggtcactgtttgag +tctgactgtgattggttggttaatgcatcgaatcccggccatcgccctggcggcggcctttgccacgctttc +taccaacgctaccccgagtctt------tccacccaactgagttcattatgcgtgacgg---tcttgccgcg +tacactttaaccccccggcctattattcatgcagtggcccctgactatagggttgagcataacccaaagagg +cttgaggcagcataccgagagacttgctctcgccgcggtaccgccgcctacccactcctcggctcgggcata +taccaagttcccgtcagcctcagctttgatgcttgggagcgtaaccaccgccccggggacgagctttaccta +accgacctcgctgctacc-------------------------------------------------tggtt +tgaggccaataagccaacaca--------------------------------------------------- +------------------------------------------gccggcccttacaataactgaggacgcagc +cc------------gcacagccaacctagcactggagatcg------------atgttgctacggaggtcgg +ccgggcttgt---gccggctgtgcagttagccctggggttgtgcattaccagtttactgctggggtcccagg +ttcagggaagtcgcgttctatacagcagggggatgttgatgtagtggttgttcccactcgggagctccggaa +tagttggcgtcgccggggtttcgcggcttttacaccccatacggcggcccgtgttaccacgggccgtcgtgt +tgtgattgacgaggccccatctctcccaccgcatttgttgctactacacatgcagcgggcctcgtcggtcca +ccttctcggcgacccaaaccagattcctgccatagacttcgagcacgccggcctggtccctgcgatacgccc +tgagcttgcgcccaccagttggtggcatgtcacccatcgctgccccgctgacgtgtgcgagctcatacgcgg +ggcttatcccaaaatccaaaccactagccgcgtgctgcggtccttattctggaatgag------cctgccat +cggccagaagttagttttcacccaggctgctaaggccgctaaccccggagcgattacagtccacgaggccca +gggcgccactttcacggaaactacaatcatagccacagctgatgccagggggctcatccaatcttcccgagc +ccatgccatagttgcacttacccgccacacagagaagtgcgttattcttgacgcccccggcttgctacgtga +ggttggtatatcggatgtgattgttaacaatttt------------------------------ttcctcgc +cggcg--gagaggtgggccaccaccgcccctctgtgatacctcgcggtaatcctgaccagaacctcgcaac- +-----actacaggccttcccaccttcttgccagattagtgcctaccaccagctagctgaggaacttggccac +cgcccagctcccgtcgccgctgtcttgcccccttgccctgaactcgagcaaggcttattatatatgcctcag +gaacttacggtgtctgatagcgtgctggtctttgagctcacagacatagtccactgccggatggctgcccct +agccagcggaaggccgtcctatcgacgctcgtgggtaggtacggccgtcggacgaagctgtatgaagcagct +cactctgacgtccgtgagtccctggctagatttatccccaccattgggcccgttcaggctactacgtgtgag +ttatatgagctggttgaggccatggtggagaaaggtcaggatggctctgccgtgcttgagctcgacctctgc +aatcgtgatgtatcgcgtatcacattcttccagaaagattgtaacaaattcaccacaggggagaccattgcc +cacggtaaagtcggccagggcatctcggcctggagtaagaccttctgtgccctgtttggtccgtggtttcgt +gctattgaaaaagaaatactagctctgctcccgcctaatattttctacggcgacgcatacgaggagtctgtg +tttgccgccgctgtgtcaggggcaggttcaagcatg---gtatttgagaatgatttttcagagtttgatagc +acccaaaataacttctccct------------------tggcctcgagtgtgtagttatggaggaatgtggc +atgccccagtggctaatccggttgtaccatttggttcggtcggcttggatcctacaggcgccgaaggagtct +cttaagggattttggaagaagcattctggtgagcctggcaccctcctctggaacactgtttggaatatggcg +atcatagcacactgctatgaatttcgtgattttagggttgccgctttcaagggagatgattccgtggtcctc +tgtagcgattaccgtcagagtcgcaatgcagcggccctgattgcaggttgtgggctcaaactgaaggttgat +tatcgccctattgggttgtatgctggtgtggtagtggcccctggtctggggacgctacccgatgtggtgcgc +tttgccggccggctgtctgagaagaattggggccctgggccggagcgggctgagcagctgcgcctagctgtt +tgtgacttccttcgagggttaacgaatgttgcgcaggtatgtgttgatgttgtatcccgag-------ttta +tggagtcagccccgggttggtacataaccttattggcatgctgcaaaccatagctgatggcaaagcccattt +cacagagactgttaaacctgtgcttgacctcacgaactctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggtc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--attgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtaccgcaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgtcccacgtcgtcgatctgcccca---------gctggggctgcgccgctgac +cgccatatcacctgctcccgatacagcccctgtgcctgatgttgattcgcgcggcgccatattgcggcgcca +gtacaatttgtccacatccccgcttacatcatctgttgcatcgggtactaatttggttctttatgctgcccc +gctaaaccctttgctgccccttcaagacggcactaacactcacatcatggccactgaggcatctaattatgc +ccagtatcgggttgtccgagctacgattcgttacaggccattggtgccaaatgctgtcggcggttatgcaat +atccatctcattttggcctcagactactactacccccacgtctgttgatatgaactctattacttccactga +tgttaggattctagttcagcccggcattgcttctgagttggttattcctagtgagcgcctccattatcgaaa +tcaaggctggcgctctgtcgagacctcgggcgtggctgaagaggaggctacctctggtttggtaatgctttg +catccatggctctcctgttaattcctacactaataccccctataccggggcgcttgggctccttgatttcgc +tttagagcttgagtttaggaatttgacacccgggaacaccaacacccgtgtgtcccggtatacaagtacagc +ccgtcaccggctgcgtcgcggtgctgatggcaccgctgaactcaccaccacagcggccacgcgcttcatgaa +ggacttgcatttca---ccggcacgaac---ggggtcggtgaggtgggtcgtggtattgctctcacactctt +taatcttgctgacacgcttctcggtggtttgccgacagaattaatttcgtcggctgggggacagttattcta +ctcccgccccgtcgtttcagccaatggcgagccgactgtcaagttatacacatctgtagagaatgcgcagca +ggataaagggatcgctatcccacatgacatagatctgggtgactcccgtgtggtcattcaagactatgacaa +ccagcatgagcaggatcgacccaccccttcgcctgccccttctcgccctttttcggttcttcgcgctaatga +tgttctatggctctc-----------------------------tctaactgccgccgagtacgac------ +cagaccacatatgggtcgtccaccaacccgatgtatgtctcggatactgtcacatttgt---caacgtggct +acaggagcccaggctgtcgcccgttctcttgattggtctaaagttactctggacggccgccctcttactact +at-----ccagcagtactccaaaacattttatgttc-tcccgcttcgcgggaagttatctttctgggaggcc +gggacgactaag--gccggctacccctataattacaacacaactgctagtgatcagattctgattgaaaatg +cggctggtcat------cgtgttgctat-ttctacgtacaccaccagcttggg--------------cgctg +gccctgtgtccgtttc-tgcagttggtgttttagccccacattcggcccttgcagtccttgaaaatactatt +gatt---------accctgcccgtg----cccacaccttcgatgatttttgcccggagtgtcgcgctc---t +tggtttgcaggggtgtgccttccagtc--------tactattgctgagcttcagcgccc------------- +--------tcaaatgaaggtaggtaaaacccgggagttttaattaa-tt----ttccttc---t------gt +gccc-ctt--------c--atag-cttt-----gc-ct---t----------------attt-t-------c +tttttttt----ct----------------g----------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355368.1/17215/1-7215 |Hepeviridae isolate HESQL111, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccaccagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggctaattccgccttggcgaatgctgtggtggtccggccgttcctatcccgtgtccagactgatatcct +tattaatctgatgcaacctcggcagctcgtttttcggcctgaagtcttttggaatcacccaattcaacgagt +catacataatgagttggagcaata---ttgccgggccc-gtgccggccgctgcctagaagtgggcgcccacc +cgaggtccatcaatgacaatcctaatgtcctgcaccggtgctttcttcgcccggttggcagagatgttcagc +gctggtattctgcccctactcgtggtccggcggccaattgccgtcgttctgcgcttcgcggtctgccccccg +ttgaccgcacctattgctttgacgggttttcccgctgcgcttttgccgccgagaccgggattgctttatact +cactacatgacctctggccttcggacgttgcggaggccatggctcgtcacgggatgacgcgtttgtatgctg +tcctccatcta-ccccctgaggtcctgttaccacctggcacatatcacacgacttcctatcttctgatccac +gatggtgaccgcgctgtcgtgacttatgagggggataccagtgcgggctataaccatgatgtttctatactt +cgtgcatggatccgcaccacaaaaatagttggtgatcatccactagtgatagagagggtccgcgccattggc +tgccactttgttttgctccttactgcagcccccgagccatcacctatgccttatgtcccgtaccctcgttca +acagaggtgtatgtcaggtctatattcggccctggt---------gggtcaccctctcttttcccatcagcc +t----------gctctaccaagtcta-cattccatgctgtcccggttcatatttgggaccggctcatgctct +ttggtgccaccttagatgaccaggccttttgctgctcgcggcttatgacttatctccgcgggattagctata +aagtgaccgttggcgcacttgttgccaacgagggctggaatgcttcggaggatgcacttaccgctgttatta +ctgcagcgtatctgactatttgccatcagcgctacctccgaactcaggccatctctaaaggcatgcgccgac +ttgaggtcgagcacgcccaaaagttcatcacaaggctatacagctggctgtttgagaaatc---------ag +gccgtgattatatccccggccgtcagctccagttttatgcacagtgtcgccgttggctctcagctggttttc +atttagatcctagagtcctcgtttttgatgaggcggttccctgt---cgctgccgaagctttttaaaaaa-- +----ggttgccggcaaattttgttgctttatgaaatggctggggcagga------gtgtacctgcttcctgg +----------------agccggcagagggtttggttggcgactgtggc--------catgacaacgaggcct +atgagggatctgaggtggatcccgctgagcctgcccaccttgatgtttccgggacttatgcagtccacggcc +gtcagcttgaggctctatacagggcattaaacatcccacatgacattgcggcccgtgcattacgcttgacag +ctactgtggagctcgtctctagtccgggccgacttgagtgccgtacagtgcttgggaataagacctttcgta +catcaataactgatggcgcccatcttgaggccaacggccc------------------------cgagcatt +atgtcttgacttttgatgactctcgccaagcaatgggggctggacctcacagcctcacgtatgaacttgttc +ctgctggtctgcaggttaaaatatcttcc-------aacggcctggactgtactgcagtattcccc---cct +ggtggggcaccaagcgctgcaccgggtgaagtggcggcgttctgcagtgccttatacaggtataacaggttc +acccaacgccattcgctgaccggcgggctgtggctgcaccctgaggggctccttggtctattcccccctttc +tcccccgggcatctttgggagtccgcaaaccctttttgcggtgagagcacactttacactcgaacttggtct +acatctggtttttctagtgacttctccccccccgaggcggctcttgccgccacaggccccgatat----gag +gctaccacctagtaccccctcttctgctagtgatat-----------------ctgggtgct---------- +---------cccgtcgctt----tctgaggggt--------------cggttattgttccgccacccgagac +cccag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctagtaagcctgctaacccacttagc +cctgctgcacctagg-------------------------------------ccccctgctcgtaagccgcc +tacaccacc--------------------------------------gccggcccgcacccgccggc----- +-------------------tcctttacacttatcctgatggggctaaggtgtatgctggctctctgtttgat +tcagattgtaattggttggttaatgcgtctaaccccggccaccgccctggcggcggcctctgccatgcattc +taccagcgttttccggagtcat------tccatccgaccgactttgttatgcgtgaggg---tctcgccgca +tataccctgagcccgcgcccgatcatccatgctgtggctcctgattacagggttgagcagaatccgaagagg +ctggaggcggcatatcgcgagacctgttctcgcctcggtacagccgcctacccgctgctggggtcagggatt +taccaggtccctgttggtctgagctttgacgcctgggagcgtaatcaccgcccgggcgacgaactctacctc +accgagccagccgccgcc-------------------------------------------------tggtt +tgaagctaataagccaaccca--------------------------------------------------- +------------------------------------------gccggccctaacaattactgaggataccgc +cc------------gcacagctaacctcgcgcttgagatcg------------actcagctaccgaggtggg +ccgtgcttgc---gccggctgtactgttagccccggggttgttcattaccagttcaccgccggggtccctgg +ctctgggaagtctagatccatacagcagggggatgttgacgttgtggttgtgccaacccgtgagcttcgcaa +cagctggcggcgccgcggcttcgccgccttcacaccccatacagcagctcgcgttactgctggccggcgtgt +tgtcatagatgaggcgccttcgctcccaccgcacttgctgctgcttcatatgcaacgagcctcatcggtcca +ccttctcggcgaccctaaccagatccctgctatcgactttgagcacgccggtctggtcccggcgattcgacc +tgagctcgcccccactagctggtggcatgttactcaccgttgccccgctgatgtgtgtgagctcatacgtgg +agcctacccgaagattcagactactagtcgtgtgctgcgatccttgttctggaatgaa------cctgcggt +gggtcagaggttggtgttcacacaggcagccaaggcggccaaccccggtgcaatcaccgttcacgaggccca +gggcgccacgtttacagagactaccattatagctacggccgatgctagaggccttatccaatcctctcgtgc +acatgccatcgttgcacttacccgccatacagaaaaatgtgtcatccttgacgcccctggcctattgcgtga +ggttggcatttcagatattattgtcaataatttt------------------------------ttcctcgc +tggag--gtgaagtgggccaccaccgcccctctaccatacctcgcggtaacccagaccggaacttagatac- +-----cctacaagcgtttcctccttcttgtcaaattagtgcctatcatcaattggctgaggagctgggccac +cgaccggccccagtagccgccgtcttgcctccctgccctgagcttgaacagggcctactttatatgccacag +gagcttacagtgtctgatagtgtcctagttcttgaacttacggacatagttcactgccgtatggccgccccc +agccaacgtaaggcggttctttcgacacttgttggtagatacggccgtcgaacgaagttgtatgaagccgcc +cattctgacgtccgtgagtccttagggagatttattcctactatcggaccagtccaggccaccacgtgtgag +ctgtatgagctagttgaggctatggtggagaaaggtcaggacggctccgctgtgctagagctcgacctctgt +agccgcgatgtctcgcgtatcacattcttccagaaggactgtaataagtttacaacaggtgagaccattgct +catggcaaggtgggccagggcatttcagcttggagcaaaaccttttgtgccctattcggcccgtggtttcgt +gccattgagaaggagattttggctttgctcccgcctaacattttctacggcgatgcctatgaggagtcagtg +ttttctgcagccatttctggagccggctccagtatg---gtttttgaaaacgatttttctgagttcgatagt +acccaaaacaacttttctct------------------tggccttgagtgtgttattatggaagagtgtggt +atgccccaatggcttatccgattgtaccatctggttagatcagcctggactctgcaagccccgaaagagtct +ttgaaaggtttttggaagaagcattccggcgagcctggcactctcctttggaacaccgtctggaacatggca +atcatagcacactgctatgaatttcgtgacttgagagtggcagcttttaaaggggatgattcagtagtcctt +tgtagtgactaccgtcagagccgcaatgcggccaccttgatagccggctgtgggttgaaactgaaggttgac +taccgtcctataggtttgtatgccggcgttgtagtggctccgggcctcggggcgcttcccgacgtcgtccgg +tttgccggtcgactgtccgagaagaactggggcccgggccctgaacgcgccgaacagttgcgcctagcagtt +tgtgatttcctccgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccctggactggtacataaccttattggcatgctacagaccattgctgacggaaaggcccactt +tactgagaccgtcaagcctgtattggatctgacaaattctattatacagaggttggaatgaataacatgtc- +t----------------tgtgcatcgcccatggg------------atcgtcatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgccgatgttgtatcacaacccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------gctggggctgcgccgttaac +tgctgtttcaccagcgcctgacacagccccagtccctgatgttgattctcgtggcgctattttgcgtcgcca +gtacaatttgtccacctctcccctgacctcgtctgttgcttctggaactaaccttgtcttgtatgccgcccc +gcttaaccctctcctgcccctccaagatggcaccaatactcacatcatggcgaccgaggcgtctaattacgc +ccagtaccgagttgttcgggctacaattcgctaccgccctttggtgccgaatgctgttggtggttatgcaat +atctatttccttttggccccagaccaccactacacctacctctgttgatatgaactctattacttctactga +tgttaggatattagttcagcctggtatagcttctgagctggttatcccgagcgagcgcctacactaccgtaa +ccagggttggcgctctgtcgagacctcgggtgtggccgaggaggaggcgacatcaggcctagttatgctttg +tatccatggctcccctgttaattcctatactaacacgccctatactggtgcactggggcttctcgattttgc +acttgagcttgaatttagaaatctgacccctgggaacactaacacccgtgtgtcccgttacaccagcactgc +ccgacaccgcctgcgccgcggcgccgacgggacggccgagcttaccaccactgcagccacacgctttatgaa +ggatctgcacttta---ccgggacgaac---ggcgtcggcgaggtgggccgtggtatagccctcactttatt +taatcttgctgacacacttctcggtgggctgccgacagaattgatttcgtcggctggaggccaactattcta +ctcccgtccggttgtctcagccaatggcgagccgactgtaaagctatacacctccgtcgagaatgcgcagca +ggacaagggtattgctataccacatgatatagacttaggggactcccgtgtggtcattcaagattatgataa +ccaacatgaacaggaccggcccaccccgtcaccggccccgtcccgccccttctcggtcctccgtgccaatga +cgtcctatggctttc-----------------------------tttgactgcagccgagtatgat------ +cagacaacttacggctcgtcgactaaccctatgtatgtttcagatactgtcacacttgt---gaatgtggcg +acgggtgctcaggctgttgcccgctctcttgactggtccaaggtcaccttggacggccggcctcttactacc +at-----tcagcagtattctaagacattctatgtgc-tgccgcttcgtggcaagctctccttttgggaggct +ggcacgactaag--gccggctacccttataattacaatactactgccagtgaccagattttgattgagaatg +cagccggtcat------cgtgttgctat-atccacttacactaccagtcttgg--------------cgctg +gccctgtgtcagtttc-cgcagttggcgtcctcgccccacattctgctttagctgtgcttgaagatactatc +gact---------accctgctcgcg----cccatacgtttgatgatttttgccctgagtgtcgtaatc---t +cggcctacagggttgtgcttttcaatc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----tt-cct--ttt------gt +gccc-cct--------tc-tgag-ct-tc----ac-ct-tgt----------------tatt-t-------c +tttttttct---gcgg--------------atctcgccccc------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355370.1/17171/1-7171 |Hepeviridae isolate HESQL153, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tatcaatttgatgcaaccccggcagttggttttccgacctgaggtgctctggaatcatcctatccaacgggt +tattcataatgaacttgaacagta---ctgtcgggccc-gggctggtcgctgtctagaggttggggcccacc +caagatccattaatgacaacccaaatgttttgcaccggtgcttcttacgaccagttgggagagacgttcagc +gctggtactctgctcccacccgcggccctgcggctaactgccgccgttctgccttgcgtggcctcccccccg +ttgatcgtacctattgttttgatggattctcccgctgctcatttgccgcagaaactggggttgccctttatt +ctctgcatgacctctggccggccgatgttgcggaggctatggcccgacacgggatgacacgcttgtatgctg +cactacatctc-ccccctgaagtactactaccacctggtacttaccatacaacctcataccttttgattcac +gacggggatcgtgctgttgtgacctatgaaggtgatactagtgccggctacaaccatgatgtctccatactt +cgtgcatggatccgcacaactaagatagtcggtgaccatccgctggtgatagagcgtgttcgggctattggc +tgtcattttgtgctgctactcactgcagcccctgagccgtcaccgatgccttatgttccatacccccggtcg +acagaggtgtatgtccgctctatatttggtcctggc---------gggtccccatccctattcccatcagct +t----------gctctacgaaatcta-catttcacgctgtcccggttcatatttgggaccggctcatgctct +tcggcgccactctggatgatcaggcgttttgttgttcacggcttatgacctacctccgcgggattagttaca +aggtcactgtcggcgcccttgtcgctaatgagggatggaatgcttcggaggacgctcttaccgctgtcatta +ctgcagcgtatttgactatttgccatcagcgttacctccgtactcaagctatatccaaaggtatgcgccgac +tggaggttgagcatgcccaaaaattcattacaagactttatagttggctgtttgagaagtc---------cg +gccgtgactacatccccggccgccagctccagttttatgcacagtgccgccgttggttatcggcgggttttc +atcttgaccctagggtgcttgtttttgacgagtctgtgccctgc---cgttgtaggacatttcttaagaa-- +----ggctgtgggtaagttctgctgtttcatgaagtggttgggacagga------gtgtacctgtttcttgg +----------------aaccggcagagggtctagttggcgaccacggc--------cacgataatgaagcct +atgaggggtctgaagtcgatcaggccgagcccgcccaccttgatgtttctgggacttacgcagtccatggcc +accaacttgaggccctgtatagggcgcttaacatcccgcatgacatcgctgcccgagcctcccgtttgactg +ccaccgtcgaactcgttgcaggcccagaccgcttggagtgccgcactgtgctcgggaataagactttccgga +cgacggtggttgatggcgcccatcttgaggcgaacggccc------------------------cgagcagt +acgttctttcgtttgacgcctctcgccagtctatgggggccggctcgcatagtctctcctacgagctcactc +ctgctggtttgcaggtcaagatttcatct-------aatggcctggactgcactgcgacattcccc---ccg +ggcggcgcccctagcgctgccccgggggaggtagcagctttttgcagtgccctttacaggtacaacaggttc +actcagcgtcattcgcttataggcggcttgtggttgcaccctgagggattgttgggtatcttcccccctttc +tctcccgggcacctttgggagtctgctaaccctttttgtggggagggaactttgtacacccggacatggtca +acatctggtttttctagtgacttttccccccccgaggcagccattgcagtgccggccgctacacc----ggg +gctacgcc---gccctacacctccagctagtgacat-----------------ttgggtgct---------- +---------accgccacct----tctgaagaat--------------ttcaggttgacacagctcccgctcc +cccta------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgggcccgcccaaccatccagc +cccgccgagccaaaa-------------------------------------gcccccgtgcgtaagctgcc +aacaccacc--------------------------------------accctcgcgcacccgccgcc----- +-------------------ttctttacacctatcctgatggggcaaaggtgtacgcagggtcactgtttgag +tctgattgtgattggctggtcaatgcgtcgaatcccggtcatcgtcctggaggtggcctttgccacgccttc +taccaacgctaccctgagtctt------ttcacccaactgagttcattatgcgcgacgg---tcttgccgct +tacactttaactcccaggcctattattcatgcagtggctcctgattatagggttgagcataacccaaagagg +cttgaggcagcataccgagagacttgctctcgccgtggtaccgccgcttatccactcctcggctcaggcata +taccaagttcctgtcagcctcagctttgacgcttgggagcgtaaccatcgccccggggacgagctctaccta +actgacctcgccgctacc-------------------------------------------------tggtt +cgaggctaacaagccaacaca--------------------------------------------------- +------------------------------------------accggcccttacaataactgaggatgcagc +cc------------gtacagccaacctggcactggagattg------------atgctgctacggaggtcgg +ccgggcctgt---gccggctgtgcagttagtcctggggttgtgcactatcagtttactgctggggtcccagg +ctcggggaagtcgcgttctatacagcagggggatgttgacgtagtggttgttcctactcgggagctccggaa +tagctggcgtcgccggggttttgcagcttttacaccccatacggcggctcgtgttaccacgggccgtcgcgt +tgtgattgatgaggccccatccctcccaccgcatttgttgttactacacatgcaacgggcctcgtcggtcca +ccttctcggcgacccaaaccagatccctgccatagacttcgagcatgctggtctggtccccgctatacgccc +tgagcttgcgcccactagttggtggcatgtcactcatcgctgccccgctgacgtgtgcgagcttatacgcgg +ggcttatcccaaaatccaaaccactagccgcgtgctacggtctttattctggaatgag------cctgccat +tggccagaagttagttttcacccaggctgctaaggccgccaaccctggtgcgattacagtccacgaggccca +gggtgccacttttacggaaactacaatcatagccacggctgatgctagggggctcatccaatcctcccgagc +tcacgctatagtcgcacttacccgccacacagagaagtgcgttattcttgatgcccccggcttgttacgtga +ggttggtatatcggatgtgattgttaacaatttt------------------------------ttcctcgc +cggtg--gggaggtgggtcaccatcgcccctctgtgatacctcgcggtaatcctgaccagaacctcgcgac- +-----actacaggcctttccaccctcctgccagattagcgcctatcaccagttagctgaggaacttggccac +cgcccagcccccgtcgccgctgtcttgcccccttgccctgagcttgagcaaggcttgttatatatgccgcag +gagcttacggtgtctgatagcgtgctggtctttgaactcacggatatagttcactgccggatggctgccccc +agccagcggaaggccgtcctatcgacgcttgtgggtaggtacggccgtcggacgaagctgtatgaagcggct +cattctgacgtccgtgagtccctggctagattcatccccaccatcgggcccgttcaggctactacgtgtgag +ttatatgagctggttgaggccatggtggagaaaggtcaggatggctctgccgtgcttgagctcgacctctgc +aatcgtgatgtatcgcgtatcacatttttccagaaagattgtaataaattcaccacaggggagaccattgcc +cacggtaaggtcggccagggcatctcggcttggagtaagactttctgtgccctgtttggtccgtggtttcgt +gctattgaaaaagaaatactagctctgctcccgcctaatattttctacggcgacgcatacgaggagtctgtg +tttgccgccgctgtgtcaggggcaggttcaagcatg---gtatttgagaatgatttttctgagtttgatagc +acccaaaataacttctccct------------------tggtctcgagtgcgtggtcatggaggaatgtggc +atgccccagtggctaatccggttgtaccacttggttcggtcggcctggatcctacaggcgccgaaggagtct +cttaagggattttggaagaagcattctggtgagccaggcaccctcctctggaacactgtttggaatatggcg +atcatagcacactgctatgagtttcgtgattttagggttgccgctttcaagggagatgattctgtggtcctc +tgtagcgactaccgtcagagccgcaatgcagcggccctgattgcaggttgcgggctcaaactgaaggttgat +tatcgccctattgggttgtatgctggtgtggtggtggcccccggtttggggacgctacccgatgtggtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccagagcgggctgagcagttgcgcctagctgtt +tgtgacttccttcgagggttaacgaatgttgcgcaggtatgtgttgatgtcgtatcccgag-------ttta +tggagttagccctgggttggtacataaccttattggcatgctgcaaaccatagctgatggcaaagctcattt +tacagagactgtcaaacctgtgcttgacctcacgaattctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcctcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtaccgcaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggtacctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccacgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgccatatcacctgctcccgatacagctcccgtacctgatgttgactcgcgtggcgccatattgcggcgcca +gtacaatttatccacatccccgctcacgtcatctgttgcttcgggtactaatttggttctttacgccgcccc +gttaaaccctttgctgccccttcaggatggcactaacactcacatcatggccactgaggcatctaattatgc +ccagtatcgggttgtccgagctacgattcgctacaggccattggtgccgaatgctgtcggtggctatgcaat +atccatctcattctggcctcagactactactacccccacgtctgttgatatgaactctattacttccactga +tgttaggattctagttcagcccggtattgcctctgagctggttatccctagtgagcgcctccattatcgtaa +ccagggctggcgctctgtggagacctcgggtgtggctgaagaggaggctacttctggtttggtaatgctttg +tatccatggctctcctgttaattcctacaccaataccccctatactggggcgcttggactccttgattttgc +tttagagcttgagtttaggaacctgacacccgggaacaccaacacccgtgtgtcccggtacacaagcacagc +ccgtcatcggctgcgccgcggtgctgatggcaccgccgaacttaccaccacagcggccacgcgcttcatgaa +ggacctacacttca---ccggttcgaat---ggggtcggtgaggtgggccgtggtattgctctcacactctt +taatcttgctgacacgcttctcggtggtttgccgacagaattaatttcgtcggctggaggacagttatttta +ctcccgccccgtcgtctcggccaatggcgagccgactgtcaagttatacacatctgttgagaatgcgcagca +ggataaagggatcgctattccgcatgacatagatctgggtgactctcgtgtggtcatccaagactatgataa +ccagcatgagcaggatcgacccaccccctcgcccgccccttctcgccctttttcggttcttcgtgctaatga +tgttctctggctttc-----------------------------tcttactgccgccgagtacgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctcggatactgtcacatttgt---caacgtggct +acaggagctcaggctgtcgcccgttcccttgactggtctaaagttactctggacggccgccctcttactact +at-----ccagcagtattctaaaacattttatgttc-tcccgcttcgcgggaagttatctttctgggaggct +gggacgactaag--gctggttatccctataattacaacacaactgctagtgatcagattttgattgaaaatg +cggctggtcat------cgtgttgctat-ttccacgtacaccaccagcttggg--------------tgccg +gccctgtgtctgtttc-tgcagtcggtgttttagccccacattcggcccttgcagtccttgaagacactatt +gatt---------accctgcccgtg----cccacacttttgatgatttttgcccggagtgtcgcgctc---t +tggtttgcaggggtgtgccttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaatcaa-tt----t--cctt---t------gt +gccc-cct--------tc-atag-c----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355372.1/17165/1-7165 |Hepeviridae isolate HESQL015, complete genome +------------------------------------------g-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcatcactactgccattgag---caagctgctctggc +cgcggccaattctgccctggcgaatgctgtggtagttcggccgtttttatctcgtgtgcaaactgagattct +cattaatttgatgcaaccccggcagctggttttccgacctgaagtgctctggaaccatcctatccaacgggt +tattcataatgaattagaacagta---ctgccgggccc-gggctggtcgctgtctggaggttggggcccacc +caagatccatcaatgacaatcctaatgttctgcaccgctgctttctacgaccagttggtagagatgttcagc +gttggtactctgcccctacccgtggccccgcggccaattgtcgccgttccgctttgcgtggcctcccccctg +ttgaccgcacctactgttttgatgggttctctcgttgctcgtttgctgcagagactggtattgccctttatt +cactgcatgacctctggccggccgatgttgcagaggccatggcccgacatgggatgacacgcttatatgctg +cactacatctc-ccccctgaagtattactaccacctggtacttaccacacaacttcatatcttcttattcac +gacggcgatcgtgccgttgtgacttatgagggtgacactagtgcaggttacaaccatgatgtttccatactt +cgcgcatggatccgcacgactaagatagttggcgaccatccgctggtgatagagcgtgtgcgggctattggc +tgtcactttgtgctgctgctcactgcggcccctgagccgtcaccaatgccttatgtcccatacccccggtcg +acagaggtgtacgttcgctctatattcggccctggc---------gggtccccgtctctgtttccatcagct +t----------gctccacaaaatcca-catttcatgccgtcccagttcatatttgggaccggctcatgctct +ttggtgccaccctggacgatcaggcgttttgctgctcacggcttatgacttaccttcgcgggattagctaca +aggttactgtaggtgccctcgttgctaatgaagggtggaatgcttcggaggacgctcttaccgctgttatca +ccgcagcgtacttgaccatttgtcatcagcgttacctccgcactcaagctatatccaaaggcatgcgccggc +tggaggttgagcatgctcaaaaatttattacaagactgtatagttggctgtttgagaagtc---------tg +gacgtgactacatccccggccgtcagctccagttctatgcgcagtgtcgccgctggctatcggcgggtttcc +acctcgatccaagggtgcttgtttttgatgagtctgcgccctgc---cgttgtaggacgtttctcaagaa-- +----ggtcgcaggtaaattctgctgttttatgaagtggctggggcagga------gtgcacctgctttctgg +----------------aaccagccgagggtctggttggtgaccatggt--------cacgataatgaagcct +atgagggttctgaggtcgaccgggcagagcccgcccatcttgatgtttctgggacttatgccgtccatgggc +gccaactcgtggccctgtatagggcgcttaacatcccgcacgacatcgccgcccgagcttctcgcttaaccg +ccactgttgaacttactgcaggtccagaccgtttggagtgtcgcactgtgctcgggaataagaccttccgga +caacggtggttgacggcgcccatcttgaggcgaatggccc------------------------cgagcagt +atgtcctttcgtttgatgcctcctgccagtctatgggggccgggccgcataacctcacctatgagctcactc +ctgctggtttgcaggttaagatctcgtct-------aatggcctggattgcactgcaacattcccc---ccg +ggcggagcccctagcgcagctccgggggaggtagcggctttctgcagtgctctctataggtacaacaggttt +acccagcgccattcgcttacaggcggcctgtggttgcatcctgaggggttactaggcattttcccccccttt +tccccagggcatctttgggagtccgctaaccccttttgtggggagggaactttgtatacccgaacctggtca +acatctggtttttctagtgatttttctcccccggaagcggctgccgctacgccggctgctgccac----ggg +gtttcctc---actctacaccccctgtcagtgatat-----------------ttgggtgtt---------- +---------gccgccgccc----tctgaagagt--------------cccaggccgatgcagcgcctgctcc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctcttgagcctgtccaaccgcccggc +cccgttaggccgaag-------------------------------------gcccccgtgcgtaagccacc +aaccccgcc--------------------------------------acctccgcgtacccgccgcc----- +-------------------tcctctacacttatccggatggggcaaaggtgtatgcggggtcattgtttgag +tcagactgtgattggctggtcaatgcgtcgaatcccggccaccgtcccggaggtggcctttgtcatgctttt +taccaacgctaccccgagtctt------tccacccagctgagttcattatgcgtgacgg---tcttgctgca +tatactttagctcctcggcctatcatccacgcggtggcccctgattatagggttgagcagaacccaaagagg +cttgaggcagcataccgggagacttgctcccgccgtggtactgctgcttatccactcctcggctcgggcata +taccaagttcccgtcagccttagctttgacgcttgggagcgcaaccaccgccccggggatgagctttacctg +accgaccccgccgctacc-------------------------------------------------tggtt +cgaggctaataaaccagcgca--------------------------------------------------- +------------------------------------------accggccctcacaataactgaagatacagc +cc------------gcacagccaacctagcactagagatcg------------acgctgctacggaggttgg +ccgggcttgt---gccggttgtacagttagtcctggggttgtgcattatcaatttaccgccggggtcccagg +ttctgggaagtcgcggtctatacagcagggggacgttgatgtagtggttgtccccactcgggagcttcggaa +tagttggcgtcgccggggttttgctgctttcacgcctcacacggcggcccgtgttaccacgggccgtcgtgt +tgtgattgatgaagccccatctctcccgccgcacttgctgcttttacacatgcaacgggcctcgtcggtcca +tcttctcggcgacccaaatcagatccctgctatagattttgagcatgctggcctagtccccgcaatacgtcc +cgagcttgcacccaccagctggtggcatgtcactcatcgctgccccgctgatgtgtgcgagcttatacgcgg +ggcttaccctaaaatccagactactagccgcgtgcagcggtctttattctggaatgag------cccgccat +tggccagaagttagtttttacacaggccgctaaggctgccaaccctggtgcgattacagtccatgaggccca +gggtgccactttcacggtgactacaatcatagccacggccgatgctagggggctcattcaatcttcccgagc +ccacgccatagtcgcacttacccgccacacagagaagtgcgttatcttagatgcccccggtttgttacgtga +ggttggtatatctgatattattgttaacaatttc------------------------------ttccttgc +tggtg--gggaagtgggccaccaccgcccctctgttgtaccccgcggcagcccagaccagaacctcgcgac- +-----attacaggcctttccaccttcctgtcagatcagtgcctatcatcagctggctgaggagctgggtcac +cgcccggctcccgtcgccgccgtcctgcccccctgccctgaacttgagcagggcctgttgtatatgccacaa +gagctcacggtgtctgatagcgtgctggtttttgaactcacggacatagttcactgccggatggccgcccct +agccagcggaaggccgtcctatcgacgcttgtgggtaggtatggccgccggactaagctgtatgaggcggct +cactccgacgtccgtgagtccctgacaagattcatccccaccatcgggcccgttcaagcaactacgtgtgag +ttatacgaactggttgaggccatggtggataagggccaggacggctctgccgtacttgagcttgacctttgc +aatcgcgatgtatcacgtatcacattctttcagaaagattgtaataagttcaccacaggggagaccattgcc +cacggtaaggtcggtcagggcatttcggcttggagcaagaccttctgtgccctctttggcccgtggtttcgt +gccattgaaaaggaaatattggccctgctcccgcctaatattttctatggtgatgcatatgaagagtctgtg +tttgctgccgctgtgtctggggcaggttcatgtatg---gtatttgagaatgatttttccgagtttgatagt +actcaaaataatttttccct------------------tggcctcgagtgtgtaatcatggaggaatgtggc +atgccccagtggctaatccggttgtaccatctggttcggtcagcctggattctacaggcgccgaaggagtct +cttaaagggttttggaagaagcattctggtgagcccggcaccctcctatggaataccgtctggaatatggcg +atcatagcacattgctacgagtttcgcgattttagggtcgctgcctttaagggtgatgactcggtggtcctt +tgtagcgactaccgtcaaagccgtaacgcggcggccctgattgcgggttgcgggctcaaactaaaggttgat +taccgccctattgggttgtatgctggtgtggtggtggcccccggcctggggacgctacccgatgtagttcgc +tttgctggccggctgtctgagaagaactggggccctggaccggagcgggccgagcagctgcgccttgctgtt +tgtgattttcttcgagggctgacgaatgttgcgcaggtatgtgttgatgttgtatcccgag-------ttta +cggggttagccctgggctggtacataaccttattggcatgttacaaactattgccgatggcaaggcccactt +tacagagactgttaaacctgtgcttgaccttacgaactctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgtgccctagggctgttct +gttgctgttcctcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgcttggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcatttcgcaacccggggctggagctcgccctc +gacaaccaccccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccacgtcgtcgatctgcccca---------actggggctgcgccgctgac +tgctgtatcacctgctcctgatacggctcctgtgcctgatgttgattcgcgtggcgctatactgcggcgcca +gtataatttatctacatccccactcacatcatccgttgcttcgggaactaatctggttctttatgctgcccc +gctaaatcccttgctaccccttcaggatggcactaatactcacatcatggctactgaggcatctaactatgc +ccagtatcgggttgtccgagctacgatccgttacaggccgttggtgccgaatgctgtcggtggttatgcaat +ctccatctcattctggccccagaccactaccacccctacgtctgttgatatgaattctattacctccactga +tgttaggatcctagttcagcccggtatcgcctccgagttagttatccctagtgaacgcctccactaccgtaa +ccaaggttggcgctctgtggagacttctggtgtggctgaggaggaggctacctctggtctggtgatgctctg +tatccatggttcccccgttaattcctacaccaataccccctataccggggcgcttgggctccttgattttgc +tctagagcttgagtttaggaatttgacacccgggaacaccaacacccgcgtttcccggtatacaagcactgc +ccgtcatcggctgcgccgcggtgccgatggcaccgctgagcttaccaccacagcggctacacgtttcatgaa +ggacctgcacttca---ccggtacgaat---ggggtcggtgaggtgggccgtggtattgctctcacactctt +taatcttgctgacacgctcctcggtggtctgccgacagaattaatttcgtcggctgggggacagttgttcta +ctcccgccccgtcgtctcagccaatggcgagccggctgtcaagttgtatacatctgtggagaatgcgcagca +agataaggggattgctattccacatgatatagacttaggtgactctcgtgtggttattcaagattatgataa +tcagcatgagcaggatcggcccaccccttcgcccgccccatctcgccctttttcggttcttcgtgctaatga +tgttttatggctttc-----------------------------tcttactgctgctgagtatgac------ +cagactacatatgggtcgtccaccaacccaatgtatgtctcggatactgttacatttgt---caatgtagct +acaggagcccaggctgttgcccgctctcttgactggtctaaagttactctagatggccgccccctcactacc +at-----tcagcagtactccaaaacattttatgttc-tcccgcttcgcgggaagctatccttttgggaggcc +gggacaactaaa--gctggttacccttataattataacacgactgctagtgaccagattttggttgagaatg +cagctggtcac------cgtgttgccat-ctctacttatactaccagccttgg--------------tgctg +gccctgtgtcagtttc-ggcagtcggtgtgttagccccacattcggctcttgcagttcttgaggatactgct +gact---------atcctgctcgtg----ctcatacttttgatgatttttgtccggagtgtcgcaccc---t +tggtttgcagggatgtgccttccagtc--------tactattgctgagcttcagcgcct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattaa-tt----t--ccct--tt------gt +accc-cct--------tc------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355373.1/17239/1-7239 |Hepeviridae isolate HESQL063, complete genome +--------------------------------------------------------------ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccatcgag---caagctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgttcttatcccgtgttcaaactgatatcct +tattaacttgatgcaaccccgacagcttgtgttccggcccgaggtcctctggaatcatccaattcagcgagt +tatacataatgagctggagcaata---ctgccgagccc-gcgccggccgttgtcttgaagtgggcgctcatc +caagatctattaatgataaccccaatgttttgcaccggtgctttctccgcccggttgggagagacgtccagc +gctggtattctgcccccactcgtggtccagcggctaattgccgccgttctgcgctacgtggtttgccccctg +tcgaccgcacgtactgcttcgacgggttttcccgctgcgcttttgccgctgagaccgggatagctttatact +cactgcatgacctctggccctcggacgtcgcagaggctatggctcgccacgggatgacacgtctgtatgctg +ccctccaccta-ccccctgaagttctgttaccacctggaacttaccacacaacctcctatcttctgattcac +gacggcaatcgtgccgttgtgacttatgagggggatactagtgcgggttacaaccacgatgtgtctatactt +cgtgcatggattcgcaccactaaaatagttggtgaccacccgctggtaatagagagggtccgcgccatcggc +tgccattttgttctactccttactgcagcccccgagccgtctccaatgccttatgttccgtaccctcgttca +acagaggtgtacgttagatccatattcggtcctggc---------gggtcgccttctcttttcccatcagcc +t----------gctctaccaagtcta-cattccatgccgtcccggtccatatctgggatcggcttatgcttt +ttggtgccaccttagatgaccaggccttttgctgctcgcggcttatgacctacctccgcggaatcagctata +aagtgaccgttggcgcgcttgtcgccaacgaaggctggaatgcctcggaggatgcgctaaccgctgtgatta +ctgcagcgtatttgaccatctgtcaccagcgctacctgcgaacacaggccatttctaagggcatgcgtcggc +tagaggttgagcacgcccaaaagtttatcacaaggctatatagctggctgtttgaaaagtc---------ag +gccgtgattacatccccggccgccagctccaattttatgcacagtgccgccgttggctctcggctggctttc +atctggatcccagagtcctcgtctttgatgaggccgtcccctgc---cgatgccggagcttcctaaagaa-- +----ggtcgccgggaaattttgttgctttatgaagtggttgggacagga------gtgcacttgttttttgg +----------------aaccagcggaaggcctggttggtgactgtggc--------catgacaacgaggcct +atgaggggtctgaggtggaccccgccgagcctgctcaccttgatgtttctgggacttatgcggtccacggcc +atcagcttgaggccctatatagagcactcaatatcccagatgacattgcagctcgcgcgtcacgtctgacgg +ctaccgtggagcttgccgccagcccaggtagactcgagtgccgtacggtgcttgggaataagatcttccgca +catcaataactgatggcgcccatctcgaggccaacggtcc------------------------tgagcagt +acgtcttgacatttgatgactctcgccaagtgatgggggctgggcctcacagcctcacgtatgaacttgtcc +ccgctggcctgcaggttaaaatatcttct-------aatggtctggattgtaccgctatattccct---cct +ggtggggcgccgagtgccgcaccaggtgaagtggcggctttctgtagcgccctatacaggtacaataggttc +acccagcgccattcgctgaccggtggattgtggctgcaccctgaggggctccttggcctgtttccccctttc +tccccggggcatctttgggagtctgcaaaccccttttgtggtgagagtacactctacacacgaacttggtct +acatctggcttttctagtgacttctccccgcccgaggcgatttatgccgccccagttcctgacac----ggg +gctatctccgggtgccccctcctctgctagtgatat-----------------ttgggtgtt---------- +---------cccaccgccc----tctgaggggt--------------cggtggtcaccccaccgtccatagc +tccggctagtaagcctgctaa---------------------------------------cccacc------ +------------------------------------------------------------------------ +-tgactacac-------------------------------------------------------------- +-------------tacactt----aggccacttgtccgcgagccgtccacaccaccatcgaccttgacccca +g---------------------------------------------ttagtaagccggctaactcgtctagc +cttactgcatctagg-------------------------------------ccccccgttcgcgggctgcc +cacaccacc--------------------------------------gtcggcccgcactcgccggc----- +-------------------ttctttatacatatcctgacggggccaaggtgtatgcaggctctttgttcgag +tcagactgttactggctggtcaatgcatccaaccctggccaccgtcccggtggtggtctctgccatgcattt +taccagcgctttccagagtcgt------tttatccgaccgattttgttatgcgcgaagg---tctcgccgca +tacactttgagcccgcgtccgatcattcatgctgtggcccctgactacagggttgagcagaaccccaagagg +ttggaggcggcatatcgtgagacctgctctcgcctcggcacagctgcttacccgctactggggtcagggatt +taccaggttcctgttggcctaagctttgacgcctgggagcgtaaccatcgcccaggcgatgagctttacctt +actgagccagctgctgcc-------------------------------------------------tggtt +cgaggctaataagcccaccca--------------------------------------------------- +------------------------------------------gccagccctaacgattaccgaggacactgc +cc------------gcacagctaaccttgcgcttgagattg------------attccgctactgaggtagg +tcgtgcctgc---gccggctgcactattaaccccgggattgtccattaccagttcaccgccggggtccccgg +ctccgggaagtctaggtctatacaacagggggatgttgatgttgtggtcgtgccaactcgtgagcttcgtaa +cagttggcggcgtcgcggcttcgctgctttcacacctcacacagcagctcgtgtcactgccggccggcgtgt +ggtgatagatgaagcaccttctctcccgccgcacctgctgttgcttcatatgcagcgagcctcatcagttca +tcttcttggcgaccccaatcaaatccctgctattgacttcgagcacgccggtttggtcccggcgattcgccc +tgagctagctcctactagttggtggcatgtcacccaccgctgccccgccgatgtgtgtgagcttattcgtgg +ggcctacccaaagattcagacgaccagccgtgtattgagatctctattttggaacgag------cccgcggt +aggtcagaggctggttttcacgcaggcagccaaggccgccaatcccggcgcaatcaccgttcacgaggcaca +gggggccacgtttactgaaactaccatcatagccacagccgacgctagaggtcttattcaatcttctcgcgc +acatgccatcgttgcacttactcgccatacagaaaagtgcgttattctcgatgctcctggcctattgcgtga +ggtcggcatttctgatataattgtcaataacttt------------------------------ttcctggc +tggtg--gtgaagtgggtcatcatcgcccttccatcatccctcgcggcaacccagaccagaacttagacac- +-----ccttcaagcgttccctccgtcctgccaaatcagcgcttatcaccagttggctgaggagctgggccac +cggccagccccagtggccgctgttctacccccctgccctgagcttgagcaggggttactctacatgccgcag +gagcttacggtgtccgacagtgtcctaatatttgaacttacggacatagttcactgtcgtatggctgccccc +agtcaacgtaaggcggttctttccacgctcgttggtaggtatggccgccgaacgaagctgtacgaagcggcc +cattctgatgtccgtgagtctttagggaggttcatccctactatcgggccggtccaggccaccacatgtgag +ctatatgagctggttgaggccatggtggagaagggccaggacggttccgctgtgcttgagcttgacctctgc +aaccgtgatgtctcgcgtattacattttttcagaaggattgtaataaatttacaacaggtgagactattgcc +catggtaaagtgggccagggcatttcggcttggagtaaaaccttctgtgctctatttggcccatggttccgt +gccattgagaaggagattctggctctgctcccgcctaatatattctatggcgatgcctatgaggagtcagtg +ttctctgcggccatttctggggctggctccagtatg---gtttttgagaacgatttttctgagtttgacagc +acccaaaataatttctctct------------------cggccttgagtgtgttattatggaggagtgtggc +atgccccagtggctcattcgactgtatcatttagttagatcagcctggattctgcaagccccgaaagagtct +ttaaaaggtttctggaagaagcattccggtgagccaggcactctcctttggaacaccgtctggaacatggcg +atcatagcacactgctatgaattccgtgacctgagagtggcagcgtttaaaggggatgattcggtggttctt +tgcagtgattaccgtcagagccgcaatgcggccactctgatagctggttgtgggttgaaattgaaggttgat +tatcggcctataggtttgtatgccggcgtcgtagtggccccgggcctcggggcacttcctgatgttgtccgc +tttgcaggccgattatctgagaaaaactggggtccgggccccgagcgcgccgaacagttgcgcctagcagtt +tgtgattttcttcgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttatcggcatgctacagactattgctgatggtaaggcccattt +tattgagactgttaagcctgtgctggatcttacaaattctatcatacagaggttagaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaatccggggctggagctcgcccta +gacagccggcccg---------------ccccctcggttcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgccgtcgatctacccca---------actggggctgcgccgttaac +tgccgtttcgccagcgcctgatacggccccagtccctgatgttgattcccgtggcgctatcctgcgccgtca +gtataatctgtccacctctcctttaacttcatctgtcgcctctggaactaatcttgttctgtatgctgcccc +gcttaaccctcttctgcctcttcaggacggcaccaatacccacatcatggcgactgaggcgtctaattacgc +tcagtaccgggttgtccgggctacaatccgctatcgacctttggtgccgaatgccgttggtggttatgcaat +ttctatttctttctggcctcagactacaactacacccacctctgttgacatgaactccattacttctactga +tgttaggattttagtccagcctggtatagcctctgagttggtcatcccgagtgagcgccttcattatcgtaa +tcagggctggcgctctgttgagacatcgggtgtggccgaggaagaggcgacatcaggtttggtcatgctctg +tatccatggctcccctgttaattcttataccaacacgccctacaccggggcattggggctcctcgattttgc +actcgagcttgaatttagaaatttgacccctgggaatactaacacccgtgtgtcccgttacactagtacagc +ccggcaccgcctgcgccgtggtgccgatgggacagctgagcttacaaccactgcagccacacgttttatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggtgaggtgggtcgtggtatagccctaacgctatt +taatcttgctgatacacttctcggcgggttgccgacagaattgatttcgtcggctggaggccaattgtttta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgttgagaatgcacagca +ggataagggtattgctataccacacgatatagacttgggggattcccgtgtggtcatacaagattatgacaa +ccaacatgaacaggaccggcctaccccatcgccggccccatctcgtcccttctcagtccttcgggccaatga +tgttttgtggctttc-----------------------------tttgactgcggccgagtatgac------ +cagactacttatggctcatcaaccaatcctatgtatgtgtcagatactgtcacatttgt---taatgtggcg +acaggcgcccaggctgttgcccgatcccttgactggtctaaggtcactttggatggccggccacttaccacc +at-----ccagcagtattccaagacattttatgtgc-tgccgcttcgtggcaagctttccttctgggaagct +ggtacgactaag--gctggctacccctataattataacactactgctagtgaccagattctgattgagaatg +cagccggtcac------cgtgttgctat-atctacttatactactagtctcgg--------------cgccg +gccctgtgtctgtttc-tgcagtcggcgttcttgccccgcattctgctttagctgtgcttgaagataccatt +gatt---------atcctgcccgtg----ctcatacttttgatgatttctgccctgagtgccgtaacc---t +cggcctgcagggctgtgccttccagtc--------cactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-c-c------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355374.1/17197/1-7197 |Hepeviridae isolate HESQL085, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggcccctggcatcactactgccattgag---caagctgctctggc +cgcggccaattctgccttggcgaatgctgtggtggttcggccgtttttatcccgtgtgcaaactgagattct +cattaatttgatgcaaccccggcagctggttttccgacctgaagtgctctggaatcatcctattcaacgggt +tattcataatgagttagaacagta---ctgccgggccc-gggctggtcgctgtttagagattggggcccatc +caaggtccatcaatgacaacccgaatgttttgcatcgctgcttcctgcgaccagttggcagagatgttcagc +gctggtattctgcccctacccgtggccctgcggccaactgccgccgctctgctttgcgtggcctcccacccg +ctgaccgcacctactgttttgatggattctctcgctgcccgtttgctgcggagactggtgttgccctctatt +cattgcatgacctctggccggccgatgtcgcagaagctatggcccgacatgggatgacacgcttatatgctg +cactacacctc-ccccccgaagtattactaccacctggtacttaccacacaacttcataccttcttattcac +gacggcgatcgtgccgttgtgacttatgagggtgatactagtgcaggttacaaccatgatgtttctatactc +cgcgcatggatccgcacaactaagatagttggcgaccatccgctggtgatagagcgtgtgcgggctattggc +tgccactttgtgctgctgcttactgcggcccctgagccgtcaccaatgccttatgttccatacccccggtcg +acagaggtgtacgttcgttccatatttggccctggc---------gggtccccgtccctgtttccatcagct +t----------gctctacaaaatcca-catttcatgccgtcccagttcatatttgggaccggctcatgcttt +ttggtgccaccctagacgatcaggcattttgctgttcacggcttatgacttaccttcgtgggattagttaca +aggttactgtaggtgcccttgttgctaatgaagggtggaacgcttcggaggacgctcttaccgctgttatca +ccgcagcgtatttgaccatttgtcatcagcgttatctccgcactcaagccatatccaagggcatgcgccggc +tggaggttgagcatgctcaaaaatttattacaagactctatagttggctgtttgagaagtc---------tg +gccgtgactatatccccggccgtcagctccagttctatgcacagtgccgccgctggttatcggcgggtttcc +acctcgacccaagggtgcttgtctttgatgagtctgctccctgc---cgttgtaggacgtttctcaagaa-- +----ggtcgcaggtaagtcctgttgttttatgaagtggctggggcagga------gtgcacctgcttcctgg +----------------agccagctgagggtctggttggtgaccatggc--------cacgataatgaagcct +atgagggttctgaggttgaccaggctgagcccgcccatcttgatgtttctgggacttatgccgtccatggga +gccaactcgaggctctgtacagggcgcttaacatcccgcacgatattgccgctcgagcctcccgtttaactg +ccactgttgaacttactgcaggcccagaccgcttggagtgtcgcactgtgctcgggaataagaccttccgga +caacggtggttgatggcgctcatcttgaggcgaatggccc------------------------cgagcagt +atgtcctctcgttcgacgcctcctgccagtctatgggtgccgggccgcataacctcacctatgagctcactc +ctgctggtttgcaggttaagatttcatct-------aatggcctggattgcactgcaacattcccc---ccg +ggcggagcccctagtgcagctccgggggaggtagcagctttttgcagtgccctctataggtacaacaggttt +acccagcgccattcgcttacaggcggtttgtggctgcatcctgaggggttattgggcatcttcccccctttt +tcccccgggcatctttgggagtccgctaatcctttttgtggggagggaactttgtacacccggacttggtca +acatctggtttttctagtgatttttccccccctgaggcagctgccactgtgccggccgctgccac----agg +gttgctcc---accctacaacccctgttagtgacat-----------------ttgggtgct---------- +---------gccgccacct----tctgaggggt--------------ctcaggttgatgcagcgcctgctcc +tctag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tccctgagcccgttcaatcgcctggc +cctgccgggccgaag-------------------------------------gcccccgtgtgtaagccacc +aacaccacc--------------------------------------acctccgcgtacccgccgcc----- +-------------------tcctctacacttatccggatggggcgaaggtgtatgcggggtcactgtttgag +tcagactgtgattggctggtcaatgcgtcgaatcccggccatcgtcccggaggtggcctttgccatgctttt +taccaacgctaccccgagtcgt------tccacccaactgaattcattatgcgtgatgg---tcttgccgcg +tatactctgactcctcggcctattatccatgcggtggctcccgattatagggttgagcagaacccgaagagg +cttgaggcagcataccgagagacctgctcccgccgtggcaccgccgcctacccactcctcggctcaggcata +taccgagttcccgttagcctcagctttgacgcttgggagcgtaaccaccgccccggggatgagctttacttg +accgacctcgccgctacc-------------------------------------------------tggtt +cgaggccaacaagccagcaca--------------------------------------------------- +------------------------------------------accggcccttacaataactgaagatacggc +cc------------gtacagccaacctagcattagagatcg------------acgctgctacggaggttgg +ccgggcttgt---gccggttgttcagttagccctggggttgtgtactatcaatttaccgccggggttccagg +ctcggggaagtcgcggtctatacaacaaggggacgttgatgtggtggttgtccccactcgggagcttcggaa +tagttggcgtcgccggggttttgcagctttcacgcctcacacggcggcccgcgttaccacgggccgtcgtgt +cgtgattgatgaggccccatcccttccgccgcacttactgcttttacacatgcagcgggcctcgtcggtcca +cctcctcggcgacccaaatcagatccccgctatagactttgagcatgccggtctggtccccgcaatacgccc +cgagcttgcgcccaccagctggtggcatgttactcatcgctgccccgctgatgtgtgcgagcttatacgcgg +ggcctatcccaaaatccagactactagccgcgtgctgcggtctttattctggaatgag------cctgccat +tggccagaagttagtctttacacaggccgctaaggctgccaaccccggtgcgattacagttcatgaggccca +gggcgccactttcacggagactacaattatagccacggccgatgccagggggctcatccaatcttcccgagc +tcacgccatagtcgcacttacccgccacacagagaagtgcgttatccttgatgcccccggtttgttacgtga +ggttggcatatctgatataattgtcaacaatttc------------------------------ttccttgc +cggtg--gggaagtgggccaccatcgcccctctgtgataccccgcggcagtcctgaccaaaacctcgcgac- +-----attacaggcttttccaccttcctgtcagatcagtgcttatcaccagttagctgaggagctgggccat +cgcccggcccctgtcgctgctgtcctgcccccctgccccgaacttgagcagggcctgctgtatatgccacaa +gagctcacggtgtctgatagtgtgttggtctttgaactcacggacatagttcattgccggatggctgcccct +agccagcggaaggctgtcctatcgacgcttgtaggtaggtatggccgtcggacgaagttgtatgaggcggct +cactccgatgtccgtgagtccctgacaagattcatccccaccatcgggcccgttcaggcaactacgtgtgag +ttatacgaactggttgaggccatggtggataagggtcaggatggctctgccgtacttgagcttgatctttgc +aatcgtgatgtatcgcgtattacattcttccagaaggattgtaacaagttcaccacaggggagaccattgcc +cacggtaaggtcggtcagggcatttcggcttggagtaagaccttctgtgccctctttggcccgtggttccgt +gctattgaaaaagaaatactggccctgctcccgcctaacatcttctacggcgatgcatatgaagaatctgtg +tttgctgccgccgtgtctggggcaggctcatgcatg---gtatttgagaatgatttttcagagtttgatagc +actcaaaataatttctccct------------------tggccttgagtgtgtagtcatggaggaatgcggc +atgccccagtggctaattcggttgtaccacttggttcggtcagcctggattttacaggcgccgaaggagtct +cttaaagggttttggaagaagcattctggtgagcccggcaccctcctttggaacaccgtttggaatatggca +atcatagctcattgctatgagtttcgtgatcttagggttgccgccttcaagggagatgattcggtggtcctc +tgtagcgactaccgtcaaagccgtaacgcggcggccctgattgcaggttgcgggctcaaactgaaggttgat +taccgccctatcgggttgtatgccggtgtggtggtggcccccggcctggggacgctacctgatgtagtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggccgagcagctgcgtcttgctgtt +tgtgacttccttcgagggctgacgaatgttgcgcaggtatgtgttgatgttgtatcccggg-------tcta +tggggttagccctgggctggtacataaccttattggcatgttgcaaaccattgctgatggtaaggcccattt +tacagagactgttaaacctgtgcttgacctcacgaactctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgtgccctagggctgttct +gttgctgttcctcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagtcgtctggcc------------gtcgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccaccgatgtcatttcgcaacccggggctggagctcgccctc +gacagccatcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccacgtcgtcgacctgcctca---------gctggggctgcgccgctgac +tgctatatcacctgctcctgatgcggcccccgtgcctgatgttgattctcgtggcgctatattgcggcgcca +gtataatttatctacatccccacttacatcatccgttgcttcgggtactaatctggttctttacgctgcccc +gctaaatcccttgttacctcttcaggatggcactaacactcacattatggctactgaggcgtccaactatgc +ccagtaccgggttgtccgagctacgatccgttacaggccgttggtgccgaatgctgtcggtggctatgcaat +ctccatctcattttggcctcagaccaccaccacccctacgtctgttgacatgaattctattacctccactga +tgttaggatcctagttcagcccggtattgcttccgagttagtcattcctagtgaacgccttcactaccgtaa +ccaaggttggcgctctgtggagacctcgggtgtggctgaggaggaggccacttccggtttggtgatgttatg +catccatggctcccccgttaactcctacaccaataccccctataccggggcgcttgggctccttgattttgc +tctagagcttgagtttaggaacctgacacccgggaacactaacacccgtgtttcccggtatacaagcactgc +ccgccatcggctgcgccgcggtgccgatggcaccgctgagcttaccaccacagcggctacacgtttcatgaa +ggacctgcacttca---ccggtacgaat---ggggtcggtgaggtgggccgtggtattgctcttacactctt +taatcttgctgacacgctcctcggtggtttgccgacagaattaatttcgtcggctgggggacagttgtttta +ttcccgccccgtcgtctcagccaatggcgagccggctgttaagttatatacatctgtggagaacgcgcagca +ggataaagggattgctattccacatgacatagacttaggtgactctcgtgtggttattcaagattatgataa +tcagcacgagcaggatcggcccaccccttcgcccgccccatctcgccctttttcggttcttcgcgctaatga +tgttctttggctttc-----------------------------tcttaccgccgccgagtatgac------ +cagactacatatgggtcttccaccaacccaatgtatgtctcagatactgtcacatttgt---caacgtggct +acaggggcccaggctgttgcccgctctcttgactggtctaaagttactctagatggtcgcccccttactacc +at-----tcagcagtattctaaaacattttatgttc-tcccgcttcgcgggaagctatccttttgggaggct +gggacaactaaa--gcaggttatccttataattataacacgactggtagtgaccaaattttaattgaaaatg +cagctggtcac------cgtgttgccat-ctctacttatactaccagccttgg--------------cgctg +gtcctgtgtcagtttc-tgcagtcggtgtgttaaccccacattcggctcttgcagttcttgaggatactatt +gact---------accctgctcgcg----cccacacttttgatgatttttgtccggagtgtcgcaccc---t +tggtctgcaggggtgtgccttccagtc--------tactattgctgaacttcagcgcct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattaa-tt----t--tcct-cct------gt +gccc-ccc--------tc-atag-cttct----gc-ct---tt---------------aatt-t-------c +tttttttt---------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355377.1/17153/1-7153 |Hepeviridae isolate HESQL108, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccatcagtttatcaaggctcctggcattactactgccattgag---caggctgctctggc +agcggctaactccgccttggcgaatgctgtggtggtccggccgtttttatcccgtgtccagactgacattct +cattaatctgatgcaaccccggcagcttgtattccggcctgaagtcttttggaaccaccccattcagcgagt +catacataacgaattggagcagta---ctgccgggccc-gcgctggtcgttgccttgaagttggcgcccatc +cgagatccatcaatgacaatcctaatgttttgcaccggtgctttcttcgcccggttggcagagatgtccagc +gctggtattctgctcccacccgcggcccggcggctaactgccgccgttctgctcttcgcggcttgccccctg +tcgatcgtacatactgcttcgatgggttctcccgttgtgcttttgccgctgagaccgggattgctttatatt +cactgcatgacctctggccttcggacgttgcggaggccatggcccgccacggtatgacgcgcctgtatgctg +tcttacactta-ccccctgaggttttgttaccacctggcacttatcacacaacctcctatctcctgatccac +gatggcgatcgtgccgtcgtgacttatgagggagacaccagtgcaggctataaccacgatgtatctatactt +cgagcttggatccgcaccacaaaaatcgttggtgaccacccactggtgatagagagggttcgtgccatcggc +tgccactttgttttgctccttactgcagcccctgagccatcccccatgccttatgttccttaccctcgttca +acagaggtatatgtcaggtctatattcggccctggc---------gggtcgccgtctctttttccgtcagcc +t----------gctctactaaatcta-cattccatgctgttccggttcatatttgggaccggctcatgctct +tcggcgccaccctagatgaccaggccttttgctgctcgcggcttatgacctacctccgcgggattagctata +aagttactgtcggtgcacttgttgccaacgagggttggaatgcctcggaggatgcacttaccgctgtgatca +ctgcagcgtatctgacaatctgccatcagcgctacctccgtactcaggccatttctaagggtatgcgccggt +tagaggttgagcacgctcaaaagtttattacaaggttatatagttggctatttgagaaatc---------ag +gccgtgattatatccccggtcgccagctccagttctatgcgcagtgccgccgttggctctcggccggtttcc +atctggatcctagggttcttgtttttgatgaggcggtcccctgc---cgctgccggagcttcctgaaaaa-- +----ggtcgccggcaaattctgttgctttatgaaatggctggggcagga------gtgcacctgttttctgg +----------------agccagcggagggtctggttggcgattgtggc--------catgacaacgaggcct +tcgagggatctgaggtggatcccgccgagcctgctcatcttgatatatctgggacctatgctgtttacggcc +gtcagcttgaggctctatatagagcactgaatatcccacacgatattgtggcccgcgcgtcacgtctgacgg +ctactgtggagcttgccgccagcccaggccggcttgagtgccgtacggtgctcgggaataagaccttccgta +catcgataactgacggcgcccatcttgaggccaacggccc------------------------tgagcagt +acgtcttgacatttgatgactctcgccaagcaatgggggcaggatctcacagcctcacatacgaacttgtcc +ctgccggtctgcaggtcaaaatatcttcc-------aatggcctggattgtactgcagtatttccc---cct +ggcggggcgccaagcgctccaccaggtgaggtggcggctttttgcagtgctctatacaggtataataggttc +acccagcgccattcactgaccggcgggctgtggctgcatcctgaggggctccttggtttgttcccccctttc +tcccctgggcatctttgggagtctgcaaacccattctgcggtgagagcacactttacacccgaacttggtct +acatccggtttttccagtgatttctcccctcccgaggcggcttttgccgccatagaccctgacac----ggg +gttgcccccgggtaccccctcttctgctagtgatgt-----------------ctgggtgct---------- +---------cccgccgccc----tctgagagat--------------cggctattgtctcgccacccgaaac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctagtaagcctgccaacccgcccagt +tctgctgcacctaag-------------------------------------ccccctgttcgtaagccgcc +tacgccacc--------------------------------------accggcccgcacccgccggc----- +-------------------ttctttacacttaccctgatggggctaaagtgtatgcaggctccctgtttgag +tcagattgtgactggttggttaatgcgtctaaccccggccaccgccctggtggaggcctctgccatgcattt +taccagcgcttcccagagtctt------tccacccgactgattttgtcatgcgtgaggg---tctcgctgca +tacactctgagcccgcgcccgatcatccatgccgtggctcctgattatagggttgagcagaacccgaagagg +ttagaggcagcatatcgtgagacttgttcccgccttggtacagctgcctacccgttgctggggtcggggatc +taccaggtccctgtaggtttgagtttcgacgcctgggagcgcaaccatcgtccaggcgacgagctctacctc +actgagccagctgctgcc-------------------------------------------------tggtt +tgaagctaataagccaactca--------------------------------------------------- +------------------------------------------gccggccctaacaattaccgaggacaccgc +cc------------gtacggctaatctcgcgcttgagattg------------attcagctaccgaggtggg +tcgcgcctgt---accggttgtactgttagccccggggttgttcattaccagttcaccgccggggtcccagg +ctctgggaagtctagatctatacagcagggggatgtcgatgttgtggtcgtgccaacccgtgagctccgtaa +cagctggcggcgccgtggctttgccgctttcacaccccacactgcagctcgtgttactgctggccggcgtgt +cgtgatcgatgaagcgccttcgctcccaccgcatttactactgctccacatgcaacgtgcctcatcagtcca +ccttctcggtgatcctaaccagattcccgccatcgactttgagcacgccggtctggtcccggcgattcgccc +tgagctcgcccctactagctggtggcacgtcacccatcgttgccctgccgacgtgtgtgagctcatacgcgg +ggcctacccaaagatccagacgactagccgtgtgatgcgatctctgttttggaatgaa------cctgcagt +gggccagaggttggtattcacgcaggcagccaaggcggctaaccccggtgcaattactgtccatgaggccca +gggtgccacgtttacagagactactattatagctacggccgatgctagaggccttattcaatcttcccgcgc +acatgccatcgttgcgcttacccgtcatacagaaaagtgtgtcatccttgacgctcctggcctactgcgtga +ggtcggtatttcggacatcattgttaacaacttt------------------------------ttcctggc +cggag--gtgaggtgggtcaccaccgcccttctaccataccccgcggtaacccagaccgcaacttagacac- +-----cctgcaagcgtttcccccttcttgccaaattagtgcctaccatcagttggccgaggagctgggccac +cggccggccccagtggccgccgttttgcccccctgccccgagcttgagcagggcttactctatatgccacag +gaactcacagtgtctgatagtgttctagtttttgagctcacggacatagttcactgccgcatggccgccccc +agtcaacgtaaggcggtcctctcaacgctggtcggcaggtacggtcgtcgaacgaagctgtatgaagcagcc +cattctgatgtccgtgagtctctcgggagatttatccctactatcggaccagtccaagccaccacgtgtgag +ttgtatgagttagttgaggccatggtagagaagggtcaggatggttccgctgtgcttgagctcgacctctgt +agccgcgatgtctcgcgtattacatttttccagaaggactgtaataagttcacaacaggcgagactatcgcc +catggcaaggtgggccagggtatttcggcttggagcaagaccttctgtgccctatttggcccgtggttccgt +gccattgagaaggagatcctggctctgcttccgcccaatatcttctatggcgatgcctatgaggagtcagtg +ttttctgcagctatttctggagcgggttccagtatg---gtctttgagaacgatttttctgaattcgatagt +acccaaaataacttctctct------------------tggccttgaatgcgttatcatggaagagtgtggc +atgccccagtggcttattcgattgtaccatctagttagatcagcctggaccctgcaagccccgaaagagtct +ttgaaaggtttttggaagaagcattccggcgagcctggtactctcctttggaacaccgtctggaacatggcg +atcatagcacactgctatgaattccgtgatttgagagtggcagcgtttaaaggagatgattcagtggttctt +tgtagtgattaccgccagagccgtaatgcggccaccctgatagccggctgtggattgaaactgaaggttgat +taccgacctataggtctgtatgctggtgttgtagtagccccgggcctcggagcactccctgatgttgtccgg +tttgccggccgactgtctgagaagaactggggcccgggccctgaacgtgctgaacagttgcgcctagcagtc +tgtgacttcctccgagggttgacgaatgttgcacaggtttgtgttgatgttgtgtcccgtg-------tcta +tggggttagtcccgggctggtacataaccttattggcatgctgcaaacgattgctgatggaaaggcccactt +tactgagactgtcaagcccgtattggatctgacaaattctatcatacagaggttagaatgaataacatgtt- +c----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcagtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaacccggggctggagctcgtcctc +gacagccggcccg---------------ccccctcggctcctcttggcgcgaccagtccca----------- +------gcgcccccccgctgcctcccgtcgtcgatctacccca---------gctggggctgcgccgctaac +cgctgtttcaccagcgcctgatacagccccggtccctgatgttgactctcgtggtgctattttgcgccgcca +gtataatctatctacctcccctctgacttcatctgtcgcctctggaactaatcttgtcttgtatgctgcacc +gcttaatcctctcttgccccttcaagacggcaccaatacccatatcatggcgactgaagcgtctaactatgc +tcagtaccgagttgtccgggctacaattcgttaccgccctctggtgccgaatgccgtcggtggttatgcaat +atctatctctttctggccccaaaccacaactacacctacctctgttgatatgaattctattacttctactga +tgttaggatattagtccagcctggcatagcctctgagttggtcatcccgagtgagcgccttcactaccgtaa +tcagggttggcgctctgtcgagacctcgggtgtggccgaggaggaggcgacatcaggtctggtcatgctttg +tattcatggttcccctgttaactcttatactaacacgccctataccggggcactggggcttcttgattttgc +acttgagcttgagtttagaaatctgactcctgggaacactaacacccgtgtgtcccgctacaccagcacagc +ccgacatcgcctgcgccgcggtgctgatgggacggctgagcttacaactactgcagccacacgttttatgaa +ggacctgcatttca---ccgggacgaat---ggtgttggtgaagtgggtcgtggtatagccctaacgctatt +caatcttgctgacacacttctcggcgggctaccgacagaattgatttcgtcggctggaggtcagttatttta +ctcccgcccagttgtctcagccaatggcgagccgacagtaaagttatacacctccgtcgagaatgcacagca +ggacaagggtattgctataccacatgatatagacttaggggactcccgtgtggtcattcaggattatgataa +tcaacatgagcaggaccggcctaccccgtcaccggccccgtcccgccccttttcggtcctccgagccaatga +tgtcctgtggctctc-----------------------------tttgactgcagctgaatatgat------ +cagaccacttatggctcgtcgactaatcctatgtatgtttcagatactgtcacatttgt---taatgtggcc +acgggtgcccaggctgtcgcccgctctctcgattggtccaaggttactttagatggccggcctcttactacc +at-----ccagcagtattctaagacattctatgtgt-tgccacttcgcggcaagctctccttttgggaggct +ggcactactaag--gccggctacccttataattataatacgactgctagtgatcagattttgattgagaatg +cagccggccac------cgtgtagccat-ctctacctacactactagtcttgg--------------tgctg +gccctgtgtcagtttc-tgcggttggcgttctcgccccgcactccgctttagctgtgcttgaagacaccatt +gatt---------accctgcccgtg----cccatacttttgatgatttttgccctgagtgccgtaatc---t +cggcttacagggctgtgcctttcaatc--------tactatcgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtattaattaa-tt----tc----------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355379.1/17165/1-7165 |Hepeviridae isolate HESQL098, complete genome +------------------------------------------g-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcatcactactgccattgag---caagctgctctggc +cgcggccaattctgccctggcgaatgctgtggtggttcggccgtttctatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagctggttttccggcctgaagtgctctggaatcatcctatccaacgggt +tattcataatgagttagaacagta---ttgccgggccc-gggctggtcgctgtttagaggttggagcccatc +caagatccattaatgacaacccgaatgttttgcatcgctgcttcctacggccagttggcagggatgttcagc +gctggtattctgcccctacccgtggcccagcggccaactgccgccgctccgctttgcgtggcctcccacccg +ctgaccgcacctactgttttgatggattttctcgctgcccgtttgctgcggagactggtgttgccctctatt +cattgcatgacctctggccggccgatgttgcagaggccatggcccgacatgggatgacacgtttatacgctg +cactacatctt-ccccccgaagtattactaccacctggcacttaccacacaacttcataccttcttattcac +gacggcgatcgtgccgttgtgacttatgagggtgacactagtgcaggttacaaccatgatgtttctatactc +cgcgcatggatccgcacaactaagatagttggcgaccatccgctggtgatagagcgtgtgcgggctattggc +tgccactttgtgctgttgctcactgcggcccctgagccgtcaccaatgccttatgtcccatatccccggtcg +acagaggtgtatgttcgctccatatttggccctggc---------gggtccccgtccctgttcccatcagct +t----------gctctacaaaatcca-catttcatgccgtcccagttcatatttgggaccggcttatgcttt +ttggtgccaccctggacgatcaggcgttttgctgctcacggcttatgacttaccttcgcgggattagctaca +aggttactgtaggtgcccttgttgctaatgaagggtggaacgcttcggaggacgctcttaccgctgttatca +ccgcagcgtatttgaccatttgtcatcagcgttacctccgcactcaagccatatctaagggcatgcgccggc +tggaggttgagcacgctcaaaaatttatcacaagactttatagttggctgtttgagaaatc---------tg +gccgtgattacatccccggccgtcagctccaattctatgcacagtgccgccgttggttatcggcgggtttcc +acctcgacccaagggtgcttgtttttgatgagtctgctccctgc---cgttgtaggacgtttctcaagaa-- +----ggttgcaggtaagttctgttgttttatgagatggctggggcagga------gtgcacctgcttcctgg +----------------aaccagctgagggtctggttggtgaccatggc--------cacgataacgaagcct +atgagggttctgaggttgaccaggccgagcccgcccatcttgatgtttctgggacttatgccgtccacggga +gccaactcgaggctctgtacagggcgcttaacatcccgcacgatattgccgcccgggcctcccgtttaactg +ccactgttgaacttactgcaagcccagaccgtctggagtgtcgcactgtgctcgggaataagaccttccgga +caacggtggtcgatggcgctcatcttgaggcgaatggtcc------------------------cgagcagt +atgtcctctcgttcgacgcctcctgccagtctatgggggccgggccgcataacctcacctatgagctcactc +ctgctggtttgcaggttaagatttcatct-------aatggcctggattgcactgcaacattcccc---ccg +ggcggagcccctagtgcagctccgggggaggtagcagctttttgcagtgccctctacaggtataacaggttt +acccagcgccattcgcttacaggcggcttgtggctgcatcctgaggggctattgggcatcttcccccctttt +tcccccggacatctttgggagtccgctaatcccttttgtggggagggaactttgtatacccggacttggtca +acatctggtttttctagtgatttctctccccctgaggtggctgccgttgcgccggccgctgccac----agg +gttgcccc---accctacaacccctgttagtgacat-----------------ttgggtgtt---------- +---------gccgccacct----tctgaggggt--------------ctcaggttgatgcagcgcctgctcc +tctag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tccctgagcccgttcaaccgcccggc +cctgttagaccgaag-------------------------------------gcctctgtgtgtaagccacc +aacaccacc--------------------------------------acctccgcgtacccgccgcc----- +-------------------tcctctacacttatccggatggggcgaaggtgtacgcggggtcactgtttgag +tcagactgtgattggctggtcaatgcgtcgaatcccggccatcgtcccggaggtggcctttgccatgctttt +taccaacgctaccccgagtcgt------tccacccaactgagttcattatgcgtgatgg---tcttgccgca +tatactctgactcctcggcctattattcatgcggtggctcctgattatagggttgagcagaacccgaagagg +cttgaggcagcataccgagagacctgctcccgccgtggcaccgccgcttacccactcctcggttcaggtata +taccgagttcccgttagcctcagctttgacgcttgggagcgtaaccaccgccccggggatgagctttacttg +accgaccccgccgctacc-------------------------------------------------tggtt +cgaggccaacaagccagcaca--------------------------------------------------- +------------------------------------------accggcccttacaataactgaagatacagc +cc------------gtacagccaacctagcactagagatcg------------acgctgctacggaggttgg +ccgggcttgt---gccggttgtacagttagccccggggttgtgcactatcaatttaccgccggggttccagg +ttcagggaagtcgcggtctatacagcaaggggacgtcgatgtggtggttgtccccactcgggagcttcggaa +tagttggcgtcgccggggttttgcagctttcacgcctcacacggcggcccgcgttaccacgggccgtcgtgt +cgtgattgatgaggccccatccctcccgccgcatctactgcttttacacatgcagcgggcctcgtcggtcca +cctcctcggcgacccaaatcagatccctgctatagattttgagcatgccggtttggtccccgcaatacgccc +cgagcttgcacccactagctggtggcatgttactcatcgctgccccgctgatgtgtgcgagcttatacgcgg +agcctatcccaagatccagactactagccgcgtgctgcggtctttattctggaatgag------cccgccat +tggtcagaagttagtcttcacacaggccgctaaggctgctaaccccggcgcgattacagttcacgaggccca +gggtgccactttcacggagactacaattatagccacggccgatgccagggggcttatccaatcttcccgagc +tcacgccatagtcgcacttacccgccacacagagaagtgcgttatttttgatgcccccggtttgttacgtga +ggttggtatatctgatacaattgtcaacaatttc------------------------------ttcctcgc +cggtg--gggaagtgggccaccatcgcccctctgtgataccccgcggcagtcctgaccagaaccttgcgac- +-----attacaggcttttccaccctcctgccagatcagtgcttatcatcagctagctgaggagctgggccac +cgcccggcccccgttgctgccgtcctgcccccctgccccgaactcgagcagggccttctgtacatgccacaa +gagctcacggtgtctgatagcgtgttggtctttgaactcacggacatagttcactgccggatggctgcccct +agccagcggaaggctgtcctatcaacgcttgtaggtaggtatggccgccggacgaagttgtatgaggcggct +cactccgatgtccgtgagtccctgacaagatttatccccaccatcgggcccgttcaggcaaccacgtgtgag +ctatacgaactggttgaggccatggtagataagggtcaggacggctctgccgtacttgagcttgatctttgc +aatcgtgatgtatcgcgtattacattcttccagaaggactgtaacaagttcaccacaggggagactattgcc +cacggtaaggtcggccagggcatctcggcttggagcaagaccttttgcgccctctttggcccgtggttccgt +gctattgaaaaagagatactagccctgctcccgcctaacatcttctacggcgatgcatatgaagagtctgtg +tttgctgccgccgtgtctggggcaggctcatgcatg---gtgtttgagaatgatttttcagagtttgatagc +actcaaaataatttctccct------------------cggccttgagtgtgtagtcatggaggagtgcggc +atgccccagtggctaattcggttgtaccacttggttaggtcagcctggattctacaggcgccgaaggagtct +cttaaagggttttggaagaagcattctggtgagcccggcaccctcctttggaacaccgtttggaatatggcg +atcatagcacattgctatgagtttcgtgatcttagggttgccgccttcaagggagatgattcggtggtcctt +tgtagcgactaccgtcaaagccgtaacgcggcggccctgattgcaggttgcgggctcaaattgaaggtcgat +taccgccctatcgggttgtatgctggtgtggtggtggcccccggcctggggacgctacccgatgtagtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggccgagcagctgcgtcttgctgtt +tgtgattttctccgagggctgacgaatgttgcgcaggtatgtgttgatgttgtatcccgag-------ttta +tggggttagccctgggctggtacataaccttattggcatgttgcaaaccattgctgacggtaaggcccattt +tacagagactgttaaacctgtgcttgacctcacgaactctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcctcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagtcgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccaccgatgtcatttcgcaacccggggctggagctcgccctc +gacagccatcccg---------------ccccctcggcacctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccacgccgtcgacctgcctca---------actggggctgcgccgctgac +tgctatatcacctgctcctgatgcggcccccgtgcctgatgttgactctcgtggcgctatattgcggcgcca +gtataatttatctacatccccactcacatcatctgttgcttcgggtaccaatctggttctttatgctgcccc +gctaaatcccttgttacctcttcaggatggcactaacactcacatcatggctactgaggcgtccaactacgc +ccagtaccgggttgtccgagctacgatccgttacaggccgttggtgccgaatgctgtcggcggctatgcaat +ttctatctcattttggcctcagactactaccacccctacgtctgttgacatgaattctattacctccactga +tgttaggatcctagttcagcccggtattgcttccgagttagttattcctagtgaacgcctccactaccgtaa +tcaaggctggcgctctgtggagacctcgggtgtggccgaagaggaggccacttctggtttggtcatgctatg +cattcatggttcccccgttaactcctacaccaataccccctataccggggcgcttgggctccttgactttgc +tctagagcttgagtttaggaacctgacacccgggaacaccaacacccgtgtttcccggtatacaagtactgc +ccgtcatcggctgcgccgtggcgccgatggcaccgctgagcttaccaccacagcggctacacgtttcatgaa +ggacctgcacttca---ccggtacgaat---ggggtcggtgaggtgggccgtggtattgctcttacactctt +taatcttgctgacacgctcctcggtggtctgccgacagaattaatttcgtcggctgggggacagttgttcta +ttcccgccccgtcgtctcagccaatggcgagccggctgttaagttatatacatctgtggagaacgcgcagca +agataaagggattgctattccacatgacatagacttaggtgactctcgtgtggttattcaagactatgataa +tcagcatgagcaggatcggcccaccccttcgcctgccccatctcgccctttctcggttctccgtgctaatga +tgttctttggctttc-----------------------------tctcaccgccgctgagtatgat------ +cagactacatatgggtcttccaccaacccaatgtatgtctcagatactgtcacatttgt---caacgtggct +acaggggcccaggctgttgcccgctctctcgactggtctaaagttactctagatggccgtccccttactacc +at-----tcagcagtactccaaaacattttatgttc-tcccgcttcgcgggaagctatccttttgggaggst +gggacaaataaa--gctggttatccttataattttaacacgaatgstagtgrccagattttaattgaaaatg +cagctggtcac------cgtgttgctat-ttctacttacactaccaaccttgg--------------cgctg +gtcctgtgtcagtttc-tgcagtcggcgtgttagccccacattcggctcttgcagttcttgaggatactact +gact---------accctgctcgcg----cccacacttttgatgatttctgtccggagtggcgcgccc---t +tggtttgcaggggtgtgccttccagtc--------tactattgstgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttctaattaa-tt----t--ccct--tt------gt +gccc-cct--------tc------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355382.1/17169/1-7169 |Hepeviridae isolate HESQL157, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggctaactccgccttggcgaatgctgtggtggttcggccgtttctatctcgagttcaaactgaaattct +tattaacctgatgcaaccccggcagcttgtgttccgacctgaagtcttttggaatcacccgattcagcgagt +tatacataatgagctggagcaata---ctgcagagccc-gcgccggccgctgccttgaagttggtgctcacc +cgagatccattaatgacaaccctaatgttttgcatcggtgctttctccgcccggttgggagagacgtccagc +gctggtattccgcccctacacgcggcccagcggccaactgtcgccgttccgcactacgtggcctgccccctg +tcgaccgcacatactgctttgacgggttttcccgctgtgcttttgccgctgaaactggagttgctttgtact +cactgcacgacctctggccctcagatgttgcggaggccatggcccgccacgggatgacgcgcctgtatgccg +tccttcatctc-ccccccgaggttctgttaccacctggcacttaccacacaacctcttatcttttgattcat +gacggtgatcgcgccgtcgtgacttatgagggggacaccagtgctggttacaaccacgatgtatctatactt +cgtgcatggatccgcaccactaaaataactggtgaccacccactggtgatagagagggtccgcgccattggc +tgccattttgtattgcttcttactgcagcccctgagccatctcctatgccttatgttccgtatccccgctca +acagaggtttatgtcaggtctatatttggccccggc---------gggtcgccctctcttttcccatcagcc +t----------gctctaccaaatcca-cattccatgcagtcccggttcatatttgggaccggctcatgcttt +ttggtgccaccctggatgaccaggcattttgttgctcgcggcttatgacctatctccgcgggattagctata +aagtgaccgttggtgcacttgttgccaacgagggttggaatgcctcggaggatgcgcttaccgccgtgatta +ctgcagcgtatttgactatttgccatcagcgctacctccggactcaggctatttctaaaggcatgcgccgtc +tggaggttgagcatgcccagaagttcattacaaggttatatagctggctgtttgagaagtc---------tg +gccgtgactatatccccggccgccagcttcagttttatgcacagtgtcgccgttggctctcggctggtttcc +atctagaccctagggttctcgtctttgatgaggcggtcccttgt---cgctgccggagttttttaaagaa-- +----ggttgccggtaagttttgttgctttatgaaatggctgggccagga------gtgcacctgttttctgg +----------------agccggcagaaggtttggtaggcgactgtggt--------catgacaatgaagcct +atgaggggtctgaggtagaccccgctgagcctgctcaccttgatgtatctgggacttatacagttcacggtc +gccagcttgaggctctatacagagcgttaaacatcccgcatgatatcgctgcccgtgcatcacgcctgacgg +ctactgtggaacttgttgcaggcccaggtaggcttgagtgccgtacggtactcgggaacaagattttccgta +catcaataactgacggtgcccaccttgaggccaatggccc------------------------cgaacagt +acgtcttgacatttgatgattctcgccaaacgatgggtgccgggcctcacagcctcacgtacgagcttgtcc +ctgccggcctgcaggttaaaatgtcttct-------aatggcctggactgtactgcagtattcccc---cct +ggtggggcaccgagtgctgcaccaggtgaagtagctgctttttgcagcgccctatacaggtacaataggttc +acccagcgccattcactgaccggcgggttgtggctgcaccctgaggggcttcttggtttgttcccccctttc +tcccccgggcacgcttgggagtctgcaaatcctttctgtggcgagagtacactttacactcgaacttggtct +acgtctgggttctctagtgacttctccccccctgaggcagctcttgccgctacagttcccaatac----ggt +gttacctctgggcacctcctcctctgctagtgatgt-----------------ttgggtgtt---------- +---------cccgccaccc----tctgagggat--------------cagcggtcgctccgcctactgagac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtaggcctgctgacccgcctaga +cctgtaacacctaag-------------------------------------ccttttgttcgtaagccgcc +tacaccacc--------------------------------------accgacccgcacccgtcggc----- +-------------------tcctctatacctaccctgatggggccaaggtgtatgcaggttccctgtttgag +tcagattgtgactggttggtaaatgcatctaaccctggtcaccgccctggtggcggcctttgccatgcattt +taccagcgttttccggagtcgt------tccacccgactgattttgttatgcgtgaagg---cctcgccgca +tataccttgagcccgcgtcccattattcatgctgtcgcacctgactatagggttgagcagaaccccaagagg +ctagaggcagcatatcgcgagacctgctctcgccttggcacagctgcctacccgttactggggtcggggatc +tatcaggtccctgtgagcctaagtttcgatgcctgggagcgtaaccaccgcccgggcgacgaactctatctt +actgagccggctgccacc-------------------------------------------------tggtt +cgaagctaataagccgacccg--------------------------------------------------- +------------------------------------------gccagccttaacaatcactgaggataccgc +cc------------gtacagccaatcttgcgcttgagattg------------actcagccaccgaggtggg +tcgagcttgc---gccggttgcactgtcagccccggggtcgtgcactatcaattcaccgccggggttcctgg +gtctgggaagtcaagatctatacagcagggggatgttgatgttgttgttgtgccaacccgtgagctccgtaa +tagctggcggcgtcgcggctttgctgcttttacaccccacacagctgcccgcgttaccgctggccggcgtgt +cgtgatagatgaggcaccctcgctcccaccgcacttgctgctgcttcacatgcaacgagcctcgtcggttca +ccttcttggtgatcctaaccagatccctgccattgatttcgagcacgccggcttggttccggcgatccgccc +tgagctcgcccctactagttggtggcatgtcacccaccgctgtcctgccgatgtgtgcgagctcatacgcgg +agcttacccaaagattcagacgacaagccgcgtgctgcggtctttattctggaatgag------ccggcagt +gggccagaggctggttttcacacaagcggccaaggccgccaaccccggtgcaattactgttcatgaggccca +gggcgccacgtttacagagactactataatagctacggctgatgctagaggcctaattcaatcctcccgtgc +gcatgccatcgttgcgctcactcgccatacagaaaaatgcgtcatttttgacgcccctggtctactgcgaga +ggtcggcatttctgatataattgtcaataatttc------------------------------tttctggc +tggag--gtgaggtgggccatcatcgcccttctaccataccccgtggcaacccagaccagaacttagacac- +-----cctacgagcattccctccatcctgtcagatcagtgcctaccatcagctggctgaggagctaggccac +cggccggccccggtggccgctgtcctgcccccctgccctgagcttgaacaggggctgctctacatgccgcag +gagctcacagtttctgatagtgttttggtctttgagctcacggacatagtccattgtcgtatggctgccccc +agccaacgtaaggcggtcctttcaacactcgttggtagatacggccgtagaacaaagctgtatgaggcggcc +cattctgatgtccgtgagtccttagggaggtttatccccactatcggaccggtccaggccaccacatgcgag +ctatatgagttggttgaggccatggtggagaagggccaggacggctcagctgtactggagctcgacctctgt +agccgtgacgtctcgcgtatcacatttttccagaaggattgcaataagtttacaacaggcgagactattgct +cacggtaaggtgggccagggcatttcggcctggagcaagaccttctgtgctctatttggcccgtggttccgt +gctattgagaaagagatcttagccctactcccgcccaatattttctatggcgatgcctatgaggagtcagtg +ttttctgcagccatttctggggcgggctccagtatg---gtttttgagaatgatttttctgagtttgacagc +actcaaaataatttctccct------------------tggtcttgagtgtgtcattatggaggagtgtggc +atgcctcagtggctaattcggttgtaccatctagtcagatcagcctggactttgcaagccccgaaagagtct +ttgaaaggcttttggaagaagcactccggcgagcctggtactctcctttggaacaccgtctggaatatggcg +atcatagcacactgctatgaattccgcgacttgagagtggcggcgtttaagggagatgactcagtggttctc +tgtagtgattaccgccagagccgcaatgcggctgccctgatagccggctgtgggttgaaattgaaggttgat +taccgccctataggtctgtatgccggtgttgtggtggccccgggcctcggggcactccctgatgtcgtccgg +tttgccggccggctatccgagaagaactggggcccgggtcctgaacgcgctgaacagctgcgtctagcagtt +tgtgatttcctccgagggttgacgaatgttgcgcaggtttgtgttgatgtcgtgtcccgtg-------tcta +tggggttagccctgggctggtacataaccttatcggcatgttacagactatagctgatgggaaggcccattt +tactgagaccgtcaagcctgttctggatcttacaaattctatcatacagaggttggaatgaataacatgtt- +c----------------tgtgcatcgcccatggg------------atcgccatgcgccctggggctgttct +gttgctgctcctcgtgtttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcagtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaacccggggctggagctcgccctc +gacagtcggcccg---------------ccccctcggctcatcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgccgtcgatctgcccca---------gctggggctgcgccgctaac +tgccgtctcaccagcacctgacacagctccagtccctgatgtcgactctcgtggcgctatcctccgccgcca +gtataatctgtctacatctcccctgacctcatctgttgcttctggaactaacctcgttttgtatgccgcccc +gctgaatcctcttttgcccctccaagatggcactaatactcacatcatggcgactgaggcatctaattatgc +tcagtaccgagttgtccgggctacaattcgttatcgccctttggtgccgaatgctgtcggtggttatgcaat +ctctatttctttctggcctcagactacaactacacccacctctgttgatatgaattctattacttctactga +tgttaggattttagtccagcctggcatagcctctgagttggtcatcccgagtgagcgtcttcactaccgtaa +tcaaggttggcgctctgttgagacctcgggtgtggccgaggaggaggcaacatcaggtttagttatgctttg +catccatggttcccctgttaattcctatactaatacgccctacaccggggcactggggcttcttgattttgc +acttgagcttgaatttagaaatctaacccccgggaacactaacacccgtgtgtcccgttatactagcacggc +ccgacaccgcctgcgtcgcggtgctgatggtacggctgagcttacaactactgcagccacacgttttatgaa +ggatctacatttta---ccgggacgaac---ggtgttggtgaggtaggtcgcggtatagccttaacgttatt +caatcttgctgatacacttctcggcgggttgccgacagaattgatttcgtcggctgggggtcagttgttcta +ctcccgtccggttgtctcagccaatggcgagccgactgtcaagttatatacctccgtcgagaatgcacagca +ggataagggtattgctataccacatgatatagacttaggggattcccgtgtagttattcaggactatgacaa +ccaacatgagcaggatcggcctaccccgtcaccggccccgtcccgccctttttcggtccttcgggccaatga +tgtgttatggctttc-----------------------------tttgactgcagccgagtacgat------ +cagaccacttatggctcgtcgaccaaccccatgtatgtctcagatactgtcacatttgt---caatgtggcg +acaggtgcccaggctgtcgcccgttctcttgattggtccaaggttactctagacggccggcctcttactacc +at-----ccagcagtactccaagacattttatgtgc-tgccgcttcgtggcaaactctctttctgggaggcc +ggtacgaccaag--gcaggatacccttataattataataccactgctagtgatcagatcctgattgaaaatg +cagccggccac------cgtgttgccat-atctacttataccactagtcttgg--------------cgctg +gtcctgtatcagtctc-tgcagttggcgttctcgccccgcactctgccctagccatactcgaagatacaatt +gact---------atcctgcccgtg----cccacacttttgatgatttttgccctgaatgccgcaatc---t +cggcttacagggctgtgcttttcaatc--------tactatcgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-cc----tt------gt +gccc-cct--------tc-t---------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355384.1/17251/1-7251 |Hepeviridae isolate HESQL180, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggtccggccgtttttatcccgtgttcaaactgatattct +cattaacttgatgcaacctcgacagcttgtgttccggcctgaagtcctctggaatcatccaatccagcgagt +tatacataatgagctggagcaata---ctgccgagccc-gcgctggccgttgtcttgaagtgggcgctcacc +caagatctattaatgacaaccccaatgttctgcaccggtgctttctccgcccggttggaagagacgtccagc +gctggtattccgcccctactcgtggcccagcggctaattgccgccgttctgcgctacgcggtttgccccctg +tcgaccgcacatactgtttcgacgggttctcccgctgcgcctttgccgctgagactgggatcgctttatact +cattgcatgacctttggccttcggatgtcgcggaggctatggctcgccacgggatgacgcgcttgtatgctg +ccctccatcta-cccccagaagttctgctaccacctggaacttaccatacaacctcctatcttctgatccac +gacggcaatcgtgccgtcgtgacttatgagggggatactagtgcgggttataaccacgatgtgtctatactt +cgtgcatggattcgcaccactaaaatagttggtgatcacccgctggtaatagagagggtccgcgccattggc +tgccattttgtcttacttcttacagcagcccccgagccgtccccaatgccttatgtcccgtaccctcgttca +acagaggtgtacgttagatctatatttggccctggc---------gggtcgccctctcttttcccatcagcc +t----------gctctaccaagtcta-cattccatgccgtcccggtccatatctgggaccggctcatgctct +ttggtgccactttagatgaccaggccttttgctgctcgcggcttatgacctacctccgcggaattagttata +aagtgaccgttggcgcacttgtcgccaacgaaggctggaatgcctcggaggatgcgctaaccgccgtgatta +cagcagcatatttgactatttgccatcagcgctacctacgaacacaggccatttctaaaggcatgcgtcggc +tagaggttgagcacgcccaaaaatttatcacaaggctatatagctggctgtttgaaaagtc---------ag +gccgtgattacattcccggccgccagctccaattttatgcgcagtgccgccgctggctctcggctggcttcc +atctggaccctagagttcttgtttttgatgaggcggtcccctgc---cgatgccggagcttcctaaagaa-- +----ggtcgccggaaaattttgctgctttatgaagtggttggggcagga------gtgcacttgttttctag +----------------agccagcggagggcctggttggtgactgcggc--------catgataacgaggcct +atgaggggtctgaagtggaccccgctgagcctgctcaccttgatgtctctgggacttatgcggttcacggtc +gtcagcttgaggccctatacagagcgcttaatatcccagatgacattgcagctcgtgcgtcacgtctaacgg +ctactgtggagcttgccgccagtccaggcagactcgaatgccgcacggtgcttgggaataagatcttccgca +catcaataactgatggagcccacctcgaggccaacggtcc------------------------tgagcagt +acgttttgacatttgatgattctcgccaaatgatgggggccgggcctcacagcctcacgtatgaacttgtcc +ctgctggtctgcaggttaaaatatcttct-------aatggcctggattgtaccgccgtattcccc---cca +ggtggggcgccgagcgctgcaccaggcgaagtggcggctttctgtagcgccctatataggtacaacaggttc +acccagcgccactcactaactggcgggctgtggctgcaccctgaggggcttcttggtctgttcccccctttc +tccccggggcatctttgggagtctgcaaaccccttttgtggtgagagcacactttatacacgaacttggtcc +acatctggcttttctagcgacttttccccacccgaggcggcttatgccgccccagtccctgacat----gca +gtcaacctcgggtgctccttcctccgctagtggtat-----------------ttgggtgct---------- +---------tccaccgccc----tctgaggggt--------------ctgcgatcgtttcaccacccataac +cccagcccgtaagccaactaa---------------------------------------ttcgcc------ +------------------------------------------------------------------------ +-tggtcatac-------------------------------------------------------------- +-------------tacacct----aggccacccgttcgcgagccgtccacaccaccaccggctctaacctca +g---------------------------------------------ttaataagccagctaatctgcctagc +cttactgcacctagg-------------------------------------ccccccgttcgtgagccgcc +catattgcc--------------------------------------atcggctcgcactcgccggc----- +-------------------tcctttatacatatcctgatggggccaaggtgtatgcaggttctttgtttgag +tcagattgttactggctggttaatgcatctaaccctggccaccgccctggtggtggtctctgtcatgcattc +taccagcgcttcccagagtcat------ttcatccgaccgattttgttatgcgcgaggg---tctcgccgca +tataccttgagcccgcgtccgatcattcatgctgtggcccctgactacagggttgagcagaaccctaagagg +ctggaggcggcatatcgtgagacctgttcccgcctcggcacagctgcctacccactactagggtcagggatt +tatcaggtccctgtaggtctaagctttgacgcctgggagcgtaatcatcgcccaggcgacgaactttacctt +actgagccagctgctgcc-------------------------------------------------tggtt +tgaggctaataagcccaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacaccgc +cc------------gcacggccaaccttgcgcttgagatcg------------actccgctactgaggttgg +tcgtgcctgc---gccggctgcactattaaccccgggattgtccactaccagtttaccgccggggttcctgg +ctccgggaagtctaggtctatacagcagggggatgttgatgttgtggtcgtgccaactcgcgagcttcgcaa +cagttggcggcgccgcggctttgctgcttttacacctcacacagcagctcgtgtcactgccggccgacgtgt +ggtgatagatgaagcaccttcgcttccaccgcacctgctgctgctccatatgcagcgggcctcatcagtcca +tcttcttggcgaccccaatcagatccctgccattgactttgagcacgccggtttggtcccggcgattcgccc +tgagctagcccctactagttggtggcatgtcacccaccgttgccccgccgatgtatgtgagctcatacgcgg +ggcctacccaaagattcagacgaccagccgtgtgttgagatctctattttggaatgag------cctgcgat +aggtcagaggctggtttttacgcaggcagccaaggccgccaatcccggtgcaattaccgttcacgaggccca +gggggccacgtttactgagactactatcatagccacggccgacgctagaggtctcattcaatcttcccgcgc +acatgccatcgttgcacttactcgccatacagaaaagtgtgttatcctcgacgctcctggcctattgcgtga +ggttggcatttctgatataattgtaaataacttt------------------------------ttcttggc +tggtg--gtgaagtgggccaccatcgcccttctaccatcccccgcggcaacccagaccagaacttagacac- +-----cctccaagcgttccctccgtcctgccaaattagcgcttaccaccagttggctgaggagttgggccac +cggccggccccggtagccgccgtcctgcccccctgccctgagcttgagcaggggttactctatatgccacaa +gagcttacggtgtctgatagtgtcctaatttttgaactcacggacatagttcattgccgtatggccgcccct +agtcaacgtaaggcggttctctctacgctcgtcggcaggtacggccgccgaacgaagctgtatgaagcggct +cattctgacgtccgcgagtctttagggaggttcatccctactatcgggccggtccaggccaccacatgtgag +ctatatgaactggttgaggccatggtagagaagggccaggatggttctgctgtgctcgagctcgacctctgc +aaccgtgatgtttcgcgtattacatttttccagaaggattgtaacaaatttacaacaggtgagactattgcc +cacggtaaggtgggccaggggatttcggcttggagtaagaccttctgtgctttatttggcccttggttccgt +gccattgagaaggagattctggctctgcttccacccaatattttctatggtgatgcttatgaggagtcggtg +ttttctgcggccatctctggagctggctccagtatg---gtttttgagaatgatttttctgagtttgacagc +acccaaaataatttctctct------------------tggtcttgagtgtgttattatggaggagtgtggc +atgccccaatggcttattcgattgtaccatttagttagatcagcctggatcctgcaagccccgaaagagtcg +ttgaaaggcttctggaagaaacattctggcgagcctggcactctcctttggaataccgtctggaacatggcg +atcatagcacactgctatgaatttcgcgatctgagagtggcagcgttcaaaggggatgattcagtggttctt +tgcagcgattaccgtcagagccgtaatgcggccactctgatagccggctgtgggttaaaactgaaggttgat +taccggcctataggtttgtatgccggcgttgtagtggctccgggcctcggggcactccccgatgttgtccgc +tttgcaggtcgattatctgagaagaactggggcccgggccccgagcgcgccgaacagttgcgcctagcagtt +tgtgattttcttcgagggatgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +cggggttagccccgggctggtgcataaccttattggcatgctacagaccattgctgatggtaaggcccattt +cactgagactgtcaagcccgttctagatcttacaaattctatcatacagaggttagaatgaataacatgtt- +c----------------tgtgcaatgcccatggg------------accgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaatccggggctggagctcgcccta +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgtcccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtctcgccagcgcctgacacggccccagtccctgatgttgattctcgtggcgctattttgcgccgtca +gtataatctgtccacctctcctctaacttcatctgttgcctcaggaactaatcttgttttgtatgctgcccc +gcttaatccactcctgcctcttcaggacggcaccaatactcatatcatggcgactgaggcgtctaattacgc +tcagtaccgggttgttcgggctacaatccgctatcgccccttggtgccgaatgccgtcggtggttatgcaat +ttctatttctttctggcctcagactacaactacacccacctctgttgacatgaactccatcacttctactga +tgttaggattttagtccagcctggcatagcctctgagttggtaatcccgagtgagcgcctccactatcgtaa +tcaaggttggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggtttggtcatgctttg +tattcatggctcccctgttaattcttatactaacacgccctatactggggcgctggggctccttgattttgc +acttgagcttgaatttagaaatctgacccctgggaacactaacacccgcgtgtcccgttacactagtacagc +ccggcaccgcctgcgtcgtggtgccgatgggacagctgagcttacaaccactgcagccacacgttttatgaa +ggacctgcatttca---ccgggacaaat---ggtgttggtgaggtgggtcgtggtatagccctaacgctatt +taatcttgccgatacacttctcggtgggttgccgacagaattgatttcgtcggctggaggtcagctgtttta +ctcccgcccggttgtctcagccaatggcgagccaactgtcaagttgtacacctctgtcgagaatgcacagca +agataagggtattgctataccacacgatatagatctaggggattcccgtgtggttatacaagattatgacaa +ccaacatgaacaggaccggcctaccccgtcgccggccccatcccgtcccttttcggtccttcgagccaatga +tgtcctgtggctctc-----------------------------tctgactgcagctgagtatgac------ +cagactacttatggctcatcgactaaccctatgtatgtttcagatactgtcacatttgt---taatgtggcg +acaggcgcccaggctgttgcccgatcccttgactggtccaaggtcactttggatggccggccacttaccacc +ac-----ccagcagtactccaagacgttttatgtgc-tgccgcttcgtggcaagctttccttttgggaagct +ggtacgaccaag--gccggttacccttataattacaacactactgctagcgatcagatcctgattgagaatg +cagccggtcac------cgtgttgctat-atctacttatactactagccttgg--------------cgccg +gccctgtgtctgtttc-tgcagtcggcgttcttgccccgcactctgctttagctgtgcttgaggatactatt +gatt---------atcccgcccgtg----cccatacttttgatgatttctgccccgagtgccgcaacc---t +cggcctacagggctgtgctttccagtc--------tactattgctgagcttcagcgcct------------- +--------taaaatgaaggtaggtaagacccgggagttttaattaa-tt----cc-t-c--ttt------gt +gccc-------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355387.1/17176/1-7176 |Hepeviridae isolate HESQL012, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggtccggccgtttttatcccgtgcccagactgatatcct +tattaatctgatgcaaccccggcagcttgtgttccgacctgaagtcctctggaaccatccgattcagcgagt +catacataatgagctggagcaata---ctgccgagccc-gcgctggccgctgccttgaggtgggcgcccacc +caagatctattaatgataaccctaacgttctgcatcggtgcttcctccgcccggtcgggagggacgtccagc +gctggtattctgctcctactcgcggcccagcggccaattgccgccgttctgcgctgcgtggtttgccccctg +tcgaccgcacatactgcttcgacgggtattcccgctgcgctttcgccgctgagaccgggatcgctttatact +cactgcatgacctttggccctcggacgttgcggaggctatggcccgccacgggatgacgcgtttgtatgctg +ccctccaccta-ccccctgaggtcctgttaccacctggcacttaccacacaacctcctatcttttgattcac +gacggcaatcgtgccgtcgtgacttatgagggggacactagtgcaggctacaaccacgatgtgtccatactt +cgtgcatggatccgcactaccaaaatagttggtgatcaccccctggtaatagagagggttcgcgccatcggc +tgccactttgttctactccttactgcagcccccgagccatccccgatgccttatgttccgtaccctcgttca +acagaggtgtatgttagatctatctttggccctggt---------gggtcgccttcccttttcccgtcagcc +t----------gctctaccaagtcta-cattccatgctgttccggttcatatttgggacaggctcatgcttt +ttggtgccactttggatgaccaggccttctgctgctcgcggcttatgacctatctccgcgggattagctata +aagtgaccgttggcgcacttgtcgccaacgagggctggaatgcctcggaggatgcgcttactgctgtgatta +ctgcagcatacctgactatctgtcatcagcgctacctacggacacaggccatttccaaaggcatgcgccggt +tagaggttgagcatgcccaaaagtttatcacaaggctatatagttggctgttcgaaaagtc---------tg +gccgtgactacatccctggtcgccagcttcagttttacgcacagtgccgccgttggctttcggctggctttc +atctggaccccagagttctcgtctttgacgaggcggtcccctgc---cgctgccggagcttcttaaagaa-- +----agttgccgggaaattttgttgtttcatgaaatggttggggcagga------gtgtacttgctttctag +----------------agccagcagaaggcctaattggtgattgtggc--------catgataacgaggcct +acgaagggtctgaagtggaccccgccgagcctgtccatcttgatgtttctgggacctatgcggtccatggtc +gtcagcttgaggctctatatagagcgcttaatatcccggacgacattgcggctcgtgcgtcccgtctaacgg +ctactgtggaacttgccgccagcccaggccgcctcgagtgccgtacggtgctcggaaataagacttttcgca +catcaataactgatggtgcccacctcgaagccaacggccc------------------------cgagcagt +acgttttgacatttgatgactctcgccaggcaatgggggctggacctcacagcctcacatacgaacttgtcc +ctgccggtttgcaagttaaaatatcgtcc-------aatggcttggattgtaccgctacattccct---cct +ggcggggcgccgagtgccgcaccaagtgaggtggcagctttctgcagtgccctatacaggtacaataggttc +acccagcgccattcgctgaccggtggactgtggctgcatcccgaggggcttcttggcttgtttcctcctttc +tctccggggcatctatgggagtccgcaaaccccttttgcggcgagagtacactttatacacgaacttggtct +acatctggtttctcaagcgacttctccccacctgaggcggctcacgccgccccagtccttgacat----agg +gctaccctcgggtgccccctcatccgttagtgatgt-----------------ctgggtgtt---------- +---------tccaccgccc----tctgaggggt--------------cgacggtcgccccactgcccgaaac +ttcgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtaagccagctaactcgcctagt +t---ctatacctagg-------------------------------------ccccccgtccgtaagccgcc +tacaccacc--------------------------------------accagcccgtgcccgccggc----- +-------------------tcctttatacataccccgacggggccaaggtgtatgcgggctctttgtttgaa +tcagattgtgattggctcgttaatgcatctaaccctggccaccgccctggcggcggcctttgccatgcattt +taccagcgtttcccggagtcgt------tccacccggctgactttgtcatgcgtgaagg---tctcgccgca +tatactttgagcccgcgtccgattattcatgctgttgcccccgactatagagttgagcagaaccccaagagg +ctagaggcggcatatcgtgagacctgctcccgcctcggcacagccgcctacccgctactggggtcggggatt +taccaggtccctgttggcttaagcttcgacgcctgggagcgcaaccaccgcccgggcgacgaactttattta +actgagccagctgccgct-------------------------------------------------tggtt +cgaagccaataggccaaccca--------------------------------------------------- +------------------------------------------gccagctctaacaattactgaggacaccgc +cc------------gcacggctaatctcgcgcttgagattg------------attccgctactgaggtggg +ccgagcttgc---gcaggctgcactattaaccccgggattgtccactaccagtttaccgccggggttcctgg +ctccgggaaatctaggtctatacagcaaggggatgtcgatgttgtggttgtgccaactcgcgagcttcgtaa +tagttggcgacgccgcggctttgctgcttttacacctcatacagcagcccgtgttactgccggtcggcgtgt +ggtgatagatgaggcaccttcgctttcaccgcatttgctgctgctccatatgcagcgagcctcatcggtcca +tctccttggtgaccccaatcagatccctgctattgactttgagcacgccggcttggtcccagcgatccgccc +tgagcttgcccccaccagttggtggcatgtcacccatcgctgccccgccgatgtgtgcgagctcatacgcgg +ggcttatccaaagattcagacgaccagccgtgtgctgcggtctttattctggaatgag------cccgcggt +gggtcagaagctggttttcacgcaggcagccaaggcggctaaccctggtgcaatcaccgttcatgaggccca +gggcgccacgtttacggagactactattatagccacagctgatgctagaggtcttattcaatcctcccgtgc +acacgccattgttgcactcacccgccacacagaaaaatgcgtcattctcgacgcccctggccttttgcgtga +ggtcggcatttctgatataattgttaacaacttc------------------------------ttcctggc +tggag--gtgaggtgggccaccatcgcccttctgccatacctcgcggcaatccagacctgaacttagacac- +-----cctacgagctttccccccgtcctgccaaattagtgcctaccaccagctggctgaggagttgggccac +cggccggccccagtggccgccgttctacccccttgccctgagcttgaacaggggctactctacatgccacag +gagcttacggtgtccgatagcgtcctaatttttgaactcacggacatagttcattgtcgtatggctgccccc +agtcagcgtaaggcggtactttcgacgcttgtcggtaggtatggccgccgaacgaagctgtatgaggcggcc +cattctgatgttcgcgagtctttaggaaggttcatccccaccatcggacccgtccaggccaccacgtgcgaa +ttatacgagctggttgaggctatggtggagaagggccaggacggctccgccgtgctcgagcttgacctctgc +agccgtgatgtctcgcgcattacattctttcagaaagattgcaataaatttacaacaggtgaaaccattgcc +cacggcaaggtgggccagggcatttcggcttggagcaaaaccttctgtgccttattcggcccgtggttccgc +gccattgagaaggagattctggctctgctcccacctaatattttctatggtgatgcctatgaggagtcagtg +ttctctgcagccatttctggggccggctccagcatg---gtttttgagaacgatttttctgagtttgatagc +acccaaaacaatttttctct------------------tggccttgagtgcgtcatcatggaggagtgtggc +atgccccagtggcttattcgattgtatcacttggttcgatcagcctggaccctgcaagccccaaaagagtct +ttgaaaggtttttggaagaagcattccggcgagcctggcactctcctttggaacaccatctggaacatggcg +atcatagcacactgctatgaattccgtgacttgagagtggcagcgtttaagggggatgattcggtggttctt +tgcagtgattaccgtcagagccgtaatgcagccgccctgatagccggttgtgggttgaaattgaaggttgat +tatcgtcctataggtctgtatgccggtgttgttgtggccccgggcctcggtgcacttcctgatgttgtccgg +tttgcaggtcgattatctgagaagaactggggcccgggccccgagcgcgccgaacagttgcgcctagcggtt +tgtgacttccttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttatcggcatgctacagactattgctgatggtaaggcccattt +tactgagaccgtcaaacctgtacttgatcttacaaattctattatacagaggttggaatgaataacatgtc- +t----------------tgtgcatcgcccatggg------------atcgtcatgcgccctagggctgttct +gttgctgttcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaacccggggctggagttcgccctc +gacagccgacccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------acgcccccccgctgccccccgtcgtcgatctacccca---------gctggggctgcgccgttaac +tgctgtttcaccagcgcctgatacagccccagtccctgatattgactctcgcggcgctatcctgcgccgcca +gtataatttgtccacctctcctctaacctcatctgttgcttctgggactaaccttgttttgtacgccgcccc +gcttaatcctcttctgcccctccaagacggcactaatactcacatcatggcaaccgaggcgtccaattacgc +ccagtatcgggttgtccgggctacaatccgttatcgccctctggtgccgaacgccgttggcggttatgcaat +ttctatttccttttggcctcagactacaaccacacccacctccgttgatatgaactctattacttctactga +tgttaggattctagtccagcctggcatagcctctgaactggtcatccccagtgagcgccttcattatcgtaa +ccaaggctggcgctctgttgaaacatcaggtgtggccgaggaggaagcgacatctggcttggtcatgctttg +cattcatggttcccctgttaattcctacaccaacacgccctacactggggcattggggcttcttgactttgc +acttgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgttatactagcacagc +ccgacaccgtctgcgccgcggtgccgatgggacagccgagcttacaaccactgcagccacacgttttatgaa +ggacctgcatttca---ccgggacaaat---ggtgttggtgaggtgggccgtggcatagccctgacgttatt +taatcttgctgacacacttcttggcgggctgccgacagaattgatttcgtcggctggaggccagctgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgttaaattatacacctctgtcgagaacgcgcagca +agacaagggtattgccataccacatgacatagatttaggggactctcgtgtggttatacaagactatgacaa +ccaacatgaacaggaccggcctaccccttcaccggccccgtcccgccctttttcagtccttcgagccaatga +tgtcttgtggctttc-----------------------------tctgaccgcggccgaatatgat------ +caaactacttatggctcttcaaccaaccccatgtatgtttctgatactgtcacatttgt---taatgtggcg +acaggtgcccaggctgtagcccgttcccttgattggtccaaggtcaccctggatggccggccgctcaccacc +at-----ccagcagtactctaagacattttatgtgt-tgccgcttcgcggcaagctttccttttgggaagct +ggcacgaccaag--gctggctacccttataattataatactactgctagtgaccagattttgattgagaatg +cagccggtcac------cgtgttgctat-atctacttatactaccagtctcgg--------------tgccg +gccctgtgtctgtttc-cgcggttggcgttcttgccccgcactctgctttagctgtgcttgaagacaccatt +gact---------accctgcccgcg----cccacacttttgatgatttctgccctgagtgccgtaatc---t +cggtttgcagggctgtgctttccagtc--------aaccattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----t--ccct-ttt------gt +gccc-cct--------tc-taga-ct-tg------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355388.1/17305/1-7305 |Hepeviridae isolate HESQL071, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattctgccttggcgaatgctgtggtggttcggccgtttttatcccgtgttcaaactgatatcct +tattaacttgatgcaacctcgacagcttgtgttccggcccgaagtcctctggaatcacccgatccagcgagt +tatacataatgagctggagcaata---ctgccgagccc-gcgctggtcgttgtcttgaagtgggtgcccacc +caagatctattaatgacaaccccaatgttttgcaccggtgcttcctccgcccggttggaagagacgtccagc +gctggtattctgctcccacccgtggtccagcggctaattgtcgccgttccgcgctacgcggtctgccccctg +tcgaccgcacatattgcttcgacgggttttcccgctgcgccttcgccgctgagaccgggatcgctttatatt +cactgcacgacctctggccttcggatgttgcggaggctatggctcgccatgggatgacgcgcttgtatgctg +ccctccaccta-ccccctgaagttctgttaccgcctggaacttaccacacaacctcctatcttttgattcac +gacggcaatcgtgccgtcgtgacttatgagggggatactagtgcgggttacaaccatgatgtgtctatactt +cgtgcatggattcgcaccaccaagatagttggtgatcacccgctggtaatagagagggtccgcgccattggc +tgccattttgtcttactccttactgcagcccccgagccgtccccaatgccttatgtcccgtaccctcgctca +acagaggtgtatgttagatctatatttggccctggc---------gggtcgccttctcttttcccatcagcc +t----------gctctaccaagtcta-cattccatgccgtcccggtccatatctgggaccggcttatgctct +ttggtgccactttagatgaccaggccttttgctgctcgcggcttatgacctacctccgcgggattagttata +aggtgaccgttggcgcactagtcgccaacgaaggctggaatgcctcggaggatgcgctaaccgctgtgatta +ctgcagcgtatttaactatttgtcatcagcgctacctacgaacgcaggccatttctaaaggcatgcgtaggc +tagaggttgagcacgcccaaaaattcatcacaaggctatatagctggttattcgaaaagtc---------ag +gccgtgattacatccccggtcgccagcttcaattttatgcgcagtgccgccgttggctctcggctggcttcc +atctggaccctagagtcctcgtctttgacgagtcggtcccctgc---cgatgccggagctttctaaagaa-- +----ggtcgccggaaaattttgctgttttatgaaatggttggggcagga------gtgtacatgtttcttgg +----------------agccagcggaaggcctggttggtgactgtggc--------catgataatgaggcct +atgaggggtctgaggtggaccccgccgagcctgcacaccttgatgtctctgggacttatgcggtccacggcc +gtcagctcgaggccttatatagagcgctcaatattccagatgacattgcagcccgtgcgtcacgtttaacgg +ctaccgtggagcttgccgccagtccgggcagactcgaatgccgcacggtgcttgggaataagattttccgta +catcaataactgatggtgcccatctcgaggccaacggccc------------------------tgagcagt +acgtcttgacatttgatgattctcgccaagtgatgggggctgggcctcacagcctcacgtatgaacttgtcc +ctgctggccttcaggttaaaatatcttct-------aatggcctagattgcaccgccatattccct---cct +ggtggggcgccgagcgctgcaccaggcgaagtggcggctttctgtagcgccctatacaggtataataggttc +acccagcgccattcgctgactggcgggctgtggctgcaccccgaggggcttcttggcctgttcccccctttt +tccccggggcatctttgggagtctgcgaaccccttttgcggtgagagcacactttacacacgaacttggtcc +acatctggtttctctagcgacttctccccacccgaggcggcttatgtcgccccagcccctgacat----ggg +gttagcctcaggtgccccctcctccgctagtgatat-----------------ctgggtgtt---------- +---------tccaccgccc----tctgaggggt--------------cggcgatcattccgccacccataac +ctcggtcggtaagccaactaa---------------------------------------tccgtc------ +------------------------------------------------------------------------ +-tggtcatac-------------------------------------------------------------- +-------------tacacct----aggccactcgcccgtgagccgtccacaccaccatcggctctaacccca +g---------------------------------------------ttggtaagccagctaatccgcctagc +cctactgcacctagg-------------------------------------ccccccgtccgcgaaccgct +cacaccgcc--------------------------------------atcggctcgcactcgccggc----- +-------------------ttctttatacatatcctgatggggccaaggtgtatgcaggctctttgtttgag +tcagactgttactggctggttaatgcatctaaccccggccaccgtcctggtggtggtctctgccatgcattc +taccagcgcttcccagagtcgt------tttatccgaccgattttgttatgcgcgaggg---tcttgccgca +tatactttgagcccgcgtccgatcattcatgctgtggcccctgactatagggttgagcagaaccccaagagg +ttggaggcggcatatcgtgagacctgctcccgcctcggcacagctgcctacccactactggggtcagggatt +tatcaggtccctgttggtctaagctttgacgcctgggagcgtaatcaccgtccaggcgatgaactttacctt +actgagccagctgccgcc-------------------------------------------------tggtt +tgaggctaataagcccaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacatcgc +cc------------gcacggccaaccttgcgcttgagatcg------------actctgctactgaggttgg +tcgtgcctgc---gccggctgcactattaaccccgggattgtccactaccagttcaccgccggggttcctgg +ctccgggaagtctaggtctatacagcagggggatgttgatgttgtggtcgtgccaactcgcgagcttcgcaa +cagttggcggcgccgcggctttgctgcttttacacctcacacagcagcccgtgtcactgccggccggcgtgt +ggtgatagatgaagcaccctcgcttccaccgcacctgctgttgctccatatgcagagagcctcatcagtcca +tcttcttggcgaccccaatcagattcctgctattgactttgagcacgctggtttggtcccggcgattcgccc +tgagttagcccctactagttggtggcatgtcacccaccgttgccccgccgatgtatgtgagctcatacgcgg +ggcctaccctaagattcagacgaccagccgtgtgttgagatctttattttggaatgag------cctgcgat +aggtcagaagctggtttttacgcaggcagccaaggccaccaatcctggcgcaattaccgttcacgaggccca +gggggccacgtttactgataccaccatcatagccacggccgacgctagaggtcttattcaatcctctcgcgc +acacgccatcgttgcacttacccgccacacggaaaagtgcgttattctcgatgcccctggcttattgcgtga +ggttggcatctctgatataattgtaaataacttt------------------------------ttcctggc +tggtg--gtgaagtgggccaccatcgcccttccaccatcccccgcggcaacccagaccggaatttagacac- +-----cctccaagctttccccccgtcctgccaaattagcgcttaccaccagttggctgaggagctgggccac +cggccggccccagtggccgccgtcctgcccccctgccctgagcttgagcaggggttactctatatgccgcag +gagcttacggtgtccgatagtgtcctaatttttgaactcacggatatagttcactgccgtatggccgctcct +agtcaacgtaaggcggttctttccacgctcgtcggcaggtacggccgccgaacgaagctgtatgaagcgacc +cactctgatgtccgcgagtctttagggaggttcatccctactatcggaccggtccaggccaccacatgtgag +ctatatgaactggttgaggccatggtggagaaaggccaggatggttccgctgtgcttgagcttgacctctgt +aaccgtgacgtctcgcgtattacattcttccagaaggattgtaacaaatttacaacgggcgagactattgcc +catggtaaggtaggccaggggatttcggcttggagtaaaaccttttgtgctttatttggcccatggtttcgt +gccatcgagaaggagattctggctctgctcccacccaatattttctatggcgatgcctatgaggagtcagtg +ttttctgcggccatttctggggctggctccagtatg---gtttttgagaatgatttttctgagtttgacagc +acccaaaataatttctctct------------------tggccttgagtgtgttattatggaggagtgtggc +atgcctcaatggcttattcgactgtaccatttagttagatcagcttggattttgcaagccccgaaagagtct +ttaaaaggcttctggaagaagcactccggcgaacctggcactctcctctggaacactgtttggaacatggcg +atcatagcacactgctacgagttccgtgacctgagagtggcagcgtttaaaggggatgattcagtggttctt +tgcagcgattatcgtcagagccgtaatgcggccactctgatagccggttgtgggttaaaattgaaggttgat +taccggcctataggcttgtatgccggcgttgtagtggctccgggcctcggggcacttccagatgttgttcgc +tttgcaggccgattatctgagaagaactggggtccgggccccgaacgcgccgaacagttgcgcctggcagtt +tgtgatttccttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacagactattgctgatggaaaggcccattt +tactgaaactgttaagcccgtgctggatcttacaaactctatcatacagaggttagaatgaataacatgtt- +t----------------cgtgcattgcccatggg------------atcgccatgtgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgatgtcgtatcacaatccggggctggagctcgcccta +gacagccggtccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtttcaccagcgcctgatacggccccagtccctgatgttgactctcgtggcgctatcctgcgccgtca +gtataatttgtccacctcccctttaacttcatctgttgcctctggaactaatcttgtcttgtatgctgctcc +gcttaatcctctcctgcctctacaggacggcaccaatactcacattatggcgactgaggcatctaactacgc +ccagtaccgggttgttcgggctacaatccgctatcgccccttggtgccgaatgccgtcggtggttatgcaat +ttctatttctttctggcctcagactacaactacacccacctctgttgacatgaattctattacttctactga +tgttaggattttagtccagcctggcatagcttctgagttggtcatcccgagtgagcgccttcactatcgtaa +tcaaggttggcgctccgttgagacatctggtgtggccgaggaggaggcgacatcaggcttggttatgctttg +tattcatggctcccctgttaattcttatactaacacgccctatactggcgcgctggggctccttgattttgc +actcgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgttatactagtacagc +ccggcaccgcctgcgtcgtggcgccgatgggacagctgagcttacaaccactgcagccacacgttttatgaa +ggacttgcacttta---ccgggacaaat---ggtgttggtgaggtgggtcgtggtatagccctaacgctatt +taatcttgctgatacacttctcggtgggttgccgacagaattgatttcgtcggctggaggtcaattgtttta +ctcccgcccggttgtctcagccaatggcgagcctactgttaagttatacacctctgtcgagaatgcacagca +ggataagggcattgctataccgcacgatatagacttaggggattcccgtgtggttatacaagactatgacaa +ccaacatgaacaggaccggcctaccccgtcgccggccccatcccgtcccttttcagtccttcgggccaatga +tgtcttgtggctctc-----------------------------tctgactgcagctgagtatgac------ +cagactacttatggctcatctaccaatcctatgtatgtttcagatactgtcacacttgt---taatgtggcg +acaggcgcccaggctgttgcccggtcccttgattggtccaaggtcactctggacggccgaccacttactacc +at-----ccagcagtactccaagacattttatgtgc-tgccgcttcgtggcaagctttccttttgggaagcc +ggtacgactaag--gctggctatccttataattacaacactactgctagtgatcagattctgattgagaatg +cagccggccac------cgtgttgctat-atccacttacactactagtcttgg--------------cgccg +gccctgtgtctgtttc-tgcagtcggcgttcttgccccgcactctgctttagctgtgcttgaagatactatt +gatt---------accccgcccgtg----cccatacttttgatgatttctgccctgagtgccgcaacc---t +cggcttacagggctgtgctttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaattt----cc-c-c--ctt------gt +accc-cct--------tc-taat-ct-ct----gc-tc-tgta----------------ttc-t-------t +tcttctgc----ggt---------------tccc--ggctcccga---------------------aa---- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355390.1/17164/1-7164 |Hepeviridae isolate HESQL137, complete genome +--------------------------------------------------------g-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatcccgtgttcaaactgatattct +tattaacttgatgcaaccccggcagcttgtgttccgacctgaagtcctctggaatcacccgatccagcgagt +tatacataatgaactggagcaata---ctgccgggccc-gcgctggccgttgtcttgaggtgggcgcccacc +caagatccatcaatgacaaccctaatgtcttgcaccgctgcttcctccgcccggttggaagagatgtccagc +gctggtactctgcccccactcgtggtcctgcggccaattgccgccgttccgcgttacgcagtttgccccctg +tcgatcgcacatattgcttcgacgggttttcccgctgtgcctttgccgctgagaccggaattgctttatact +cactgcatgatctctggccttcggacgtagcggaggctatggcccgccatgggatgacgcgcctgtacgctg +cccttcaccta-ccccccgaggtcctgctaccgcctggcacttaccatacaacttcctatcttttgattcac +gacggcaatcgtgccgtcgtgacttatgagggggacactagtgcaggctacaaccacgacgtgtctatactt +cgtgcatggatccgcaccactaaaatagttggtgaccacccactggtaatagagagggtccgcgctatcggc +tgccattttgttttactccttactgcagcccctgagccgtccccgatgccttatgttccataccctcgctca +acagaggtgtatgttagatccatatttggccctggc---------gggtcgccttctctttttccatcagcc +t----------gctccaccaaatcca-catttcatgctgttcctgttcatatctgggaccgccttatgcttt +ttggtgccactttagatgatcaagccttctgctgctcgcggcttatgacctacctccgtgggattagttaca +aggtgaccgttggtgcactcgtcgccaacgagggttggaatgcctcggaggatgcgcttaccgccgtgatta +ctgcagcgtacttgactatttgccatcagcgttacttgagaacacaggctatctctaaaggcatgcgccgtc +tagagcttgagcatgcccaaaagtttatcacaaggttatacagttggctgtttgagaagtc---------ag +gccgtgattacatccccggtcgccagctccagttttatgcgcagtgccgccgctggctctcggctggcttcc +atctggaccctagagtcctcgtttttgatgaggcggtcccctgc---cgctgccggaacttcttaaagaa-- +----agttgccggaaaattttgctgttttatgaaatggttggggcagga------gtgcacctgctttttag +----------------agccagcggaaggccttactggtgactgtggc--------catgataacgaagcct +atgaagggtcagaggtggaccctgccgagcctgcccatcttgatgtctccgggacctatgcggtccatggcc +ggcagcttgaggctctttatagagcgcttaatatcccacatgacattgcggctcgtgcattacgtctgacgg +ccactgtggaactcgccgccagcccaggccgccttgaatgccgtacggtgctcgggaataagacctttcgta +catcaataactgatggcgcccacctcgaagccaacggccc------------------------cgagcaat +atgttctgacatttgatgactcccgccaggcaatgggggctggacctcacagcctcacgtatgagcttgttc +ctaccggtctgcaggttaaaatatcttct-------aatggcttggattgtaccgctatatttccc---ccc +ggtggggcgccaagtgctgcaccaggtgatgtggcggctttttgctctgctctatacaggtacaataggttt +acccaacgccattcgctgaccggcgggttgtggttgcaccctgagggactccttggccttttcccccctttc +tccccggggcatctctgggagtctgcaaaccccttctgcggtgagagcacactttatacacgaacttggtct +acatctggtttttctagtgacttctccccacctgaggcggctcctgccgctccagcccccgacat----agg +gctaccttcgggtgccccctcatctgctagtgatgt-----------------ctgggtgtt---------- +---------tccaccaccc----tctgaggggt--------------cggcgattgtcccgccacctgagac +cctgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtaagccagctaacccacccagt +cttaccacacctagg-------------------------------------ccccccgcccgtaagccacc +cacaccacc--------------------------------------cccggtccgcacccgtcggc----- +-------------------tcctttatacatatcctgatggggccaaggtgtatgcaggctctttatttgaa +tcagattgcgactggctggttaatgcatctaaccctggtcaccgccctggtggtggtctttgccatgcgttt +taccagcgctttccagagtcgt------tccatccgattgattttgtcatgcgtgaagg---tctcgccgca +tacactttgagcccgcgcccgattattcatgctgtggcccccgactatagggttgagcagaaccctaagagg +ctagaggccgcatatcgtgagacctgctctcgcctcggcacagctgcctacccgctactggggtcgggaatt +tatcaggttcctgtgggtttgagcttcgacgcctgggagcgtaaccatcgcccaggcgatgaactttacctt +accgagccagccgctgca-------------------------------------------------tggtt +cgaggctaataagccgaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgcggacactgc +cc------------gcacagccaatctcgcgcttgagatcg------------actccaccactgaggtggg +tcgtgcttgc---gccggctgcactgttaatcctgggattgtccattaccagtttaccgccggggtcccagg +ctctgggaagtctaggtctatacagcagggggatgttgacgttgtggtcgtgccgacccgcgagcttcgtaa +tagttggcgacgccgcggctttgctgcttttacacctcacacggcagctcgtgttactgcaggccggcgtgt +ggtgatagatgaggcaccttcgcttccgccgcacttgctgctgctccatatgcagcgagcctcatcggtcca +ccttcttggtgaccccaaccagatccctgctattgactttgagcacgccggtttggtcccagcgatccgtcc +tgagcttgcccctactagttggtggcatgtcacccatcgctgccccgccgacgtgtgtgagctcatacgcgg +ggcttacccaaagattcagacgactagccgtgtgttgcgatctttattttggaatgag------cctgcggt +gggtcagaggttggtgttcacgcaggcagccaaggcggctaatcctggtgcaatcactgttcacgaggccca +gggtgccacgtttacagagactaccattatagccacggccgatgctagaggtcttatccagtcttcccgagc +gcatgccatcgttgcgcttacccgccatacagaaaagtgcgtcattcttgatgcccctggactactgcgtga +agttggtatttctgatataatagtcaataacttt------------------------------ttcttggc +tggcg--gtgaagtgggccaccaccgcccttctaccatacctcgcggcaacccagaccagaacctagacac- +-----cctacgggcgttccctccgtcttgtcaaattagtgcctaccatcagctggctgaggagctaggtcac +cggccggccccagtggccgccgtcttacccccttgccctgagctcgagcaggggctactctacatgccgcag +gagcttacagtatctgatagtgtcctagtttttgagctcacggacatagttcactgtcgtatggctgcccct +agtcaacgtaaggcggtcctttcgacactcgtcggtaggtatgggcgtcgaacgaagctgtacgaagcggcc +cactccgatgttcgcgagtctttagggaggtttatccccactattggaccggtccaggctaccacatgtgag +ctatacgagctggtcgaggctatggtggagaagggccaggatggctccgccgtgcttgagcttgacctctgt +agccgtgatgtctcgcgtattacatttttccagaaggattgtaataagtttacaacaggcgagaccatcgcc +catggcaaggtgggccagggcatttcggcctggagtaaaaccttttgtgctttattcggtccgtggttccgt +gctattgagaaggagattctggctctgcttccacctaatattttctatggcgatgcctatgaggagtcagtg +ttttctgcagccatttctggggctggctccagtatg---gtttttgagaacgatttttctgagttcgatagc +acccaaaacaatttttctct------------------tggccttgagtgtgtcattatggaggagtgtggt +atgccccagtggctcatccggctgtaccatttggttagatcagcctggaccctgcaggccccaaaagagtct +ctgaaaggtttttggaagaagcattctggcgagcctggcactctcctttggaacaccgtctggaatatggcg +atcatagcacactgctatgaattccgtgacctgagggtggcagcgttcaagggggatgattcagtggttctt +tgtagtgattatcgccagagccgcaatgcggccaccttgatagctggctgtgggttgaaactgaaggttgat +taccggcctataggcctatacgccggcgttgtagtggctccgggccttggggcactccctgatgtcgtccgg +tttgctggtcgattatctgagaagaactggggcccgggccctgagcgcgccgaacagttgcgactggcagtt +tgtgatttccttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccctgggctggtgcataaccttattggtatgttacaggctattgctgatgggaaggcccactt +taccgagaccgtcaagcccgtgctggaccttacaaattctattatacagaggttagaatgaataacatgtt- +c----------------tgtgcatcgcccatggg------------atcgccatgtgccctagggctgtttt +gctgctgttcctcgtgtttctgcctatgttgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggtc------------gccgtcgtgggcg-gcgcagcggcagtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaacccggggctggagctcgccctc +gacaaccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgttgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtctcaccagcgcctgatacggccccagtccctgatgttgattctcgcggcgctattttgcgccgtca +gtacaatttgtccacttcccctttgacttcatctgttgcatctgggaccaatcttgttttgtatgccgcccc +actcaatcctcttctgccccttcaagacggcactaatactcacattatggcaactgaggcgtctaattacgc +ccaatatcgggtcgtccgggctacgatccgctatcgtcctttggtgccgaatgccgtcggtggctatgctat +ttctatttccttttggccccagaccacaactacacccacctctgttgatatgaattctattacttctactga +tgttaggattctagtccagcctggcatagcctccgagttggttatcccgagtgagcgccttcactatcgtaa +tcaaggttggcgttctgtcgagacatcgggtgtggccgaggaggaggcgacatcaggcctggttatgctctg +tattcatggttcccctgttaattcctataccaacacgccctataccggggcgttggggctccttgattttgc +acttgagctcgaatttagaaatttgacccctgggaacaccaacacccgtgtgtcacgctacacgagtacagc +ccgacaccgcctgcgtcgtggtgccgacgggacagccgagctcacaaccactgcagccacacgttttatgaa +ggacctacatttca---ccgggacaaat---ggtgttggcgaggtaggccgtggtatagccctcacgctatt +taatctagctgatacacttctcggtgggctgccgacagaattgatttcgtcggctgggggtcaattatttta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggcattgctataccgcatgatatagacctaggagactctcgtgtggttatacaagattatgacaa +ccaacacgaacaggaccggcctaccccgtccccggccccatcccgccccttctcagtccttcgagctaatga +tgtcctgtggctttc-----------------------------tttaaccgcggccgaatatgac------ +cagactacttatggctcatcgaccaaccccatgtatgtctcagacactgtcacatttgt---taatgtagca +acgggtgcccaggctgttgcccgttcccttgattggtccaaggttactctagatggccggccactcactacc +at-----cgagcagtactccaagacattttatgttt-tgccgctccgcggcaagctttctttttgggaggct +ggtacgaccaag--gccggctacccttacaattacaatactactgctagtgaccagattttgattgaaaacg +cagccggtcac------cgtgttgctat-atctacttatactactagccttgg--------------tgccg +gccctgtgtctgtttc-tgcggttggcgttcttgccccgcattctactttagctgtgcttgaggatactatc +gatt---------accccgcccgtg----cccatacttttgatgatttctgccctgagtgccgtaatc---t +cggcctgcagggctgtgcttttcagtc--------cactattgctgagcttcagcgcct------------- +--------taaaatgaaggtaggtaagacccgggagttttaattaa-tt----tc-ccc--ttt------gt +gccc-c------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355392.1/17244/1-7244 |Hepeviridae isolate HESQL118, complete genome +------------------------------------------g-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatcccgtgttcagactgatatcct +tattaacctgatgcaaccccgacagcttgtgttccggcctgaagttctttggaatcatcctatccagcgggt +catacataatgagcttgagcaata---ttgccgagccc-gcgctggccgctgtttagaggtcggcgctcatc +ctagatccatcaatgacaatcccaatgtcctgcaccggtgctttcttcgccctgtcgggagagatgtccagc +gctggtattctgcccccacccgcggcccagcggctaactgccgccgctcagcgctacgtggtttgccccctg +tcgatcgcacatattgtttcgatgggttctcccgctgcgcctttgccgctgagaccgggattgctttgtact +cactgcatgacctttggccctcggacgttgcggaggccatggctcgccacgggatgacgcgcctgtacgccg +tcctccaccta-cctcctgaggtcctgctaccacctggcacttaccatacaacctcctatcttctgattcac +gatggtaaccgcgccgtcgtgacttatgaaggtgatactagtgcgggctataaccacgatgtgtccatactt +cgtgcatggatccgcaccaccaaaatagttggtgatcacccactggtaatagagagggtccgcgccatcggc +tgccattttgttctgctccttactgcagcccctgagccatccccaatgccttatgttccgtaccctcgttca +acagaggtatacgttagatccatatttggtcctggt---------gggtcgccctctctcttcccgtcagcc +t----------gctctaccaagtcta-catttcacgccgtcccggtccatatctgggaccggcttatgcttt +ttggtgccaccttagatgaccaggccttttgctgctcgcggctcatgacctatctccgcgggattagctata +aagtgactgttggcgcactcgtcgccaacgaaggctggaatgcctcggaggatgcgcttaccgccgtgatta +ctgcagcgtatctgactatctgccatcagcgctacctacgaacacaggccatttctaaaggcatgcgccggc +tagaggttgagcacgcccaaaagtttatcactaggttatatagttggctgtttgaaaagtc---------ag +gccgcgactacatccccggccgccagctccagttttatgcgcagtgccgccgttggctctcggccggttttc +acctggaccccagggttctcgtttttgacgaggcggtcccttgc---cgctgccggagctttctgaagaa-- +----ggttgctgggaaattttgctgctttatgaaatggctgggccagga------gtgcacctgttttttgg +----------------agccagcggagggcctggttggtgactgtggc--------catgacaacgaggcct +atgagggttctgaggtggaccccgctgagcctgctcacctcgatgtttccgggacctatgcggtccacggcc +gtcagctcgaggccttatatagagcgcttaacatcccagatgacattgcggctcgcgcgtcacgtctgacgg +ccactgtagaacttgccgccagcccaggccgactcgagtgtcgtacggtgcttgggaataagacttttcgta +catcgataactgatggcgcccaccttgaagccaacggtcc------------------------cgagcagt +acgttttgacatttgatgactctcgccaggctatgggggctgggccccacagcctcacgtatgaacttgtcc +ctgccggtttgcaggtcagaatatcttct-------aatggcttggattgtaccgctatattcccc---cct +ggtggggcaccgagtgctgcaccaggtgaagtggcggctttctgtagcgctctatacaggtacaatagattc +acccagcgccattcgctgaccggtgggctgtggctgcaccctgaggggctccttggcctgttcccccctttc +tctccggggcacctttgggagtctgcaaaccccttttgtggtgagagcacactttatacgcggacttggtct +acatctggtttctctagcgacttctctccacctgaggcagcttacgccgccccagcacccgacat----agg +gccaccctcgggtgccacctcatctgctagtgatat-----------------ctgggcgtt---------- +---------tccgccgccc----tctgagaggt--------------cggcgatcgcaccgccacccgtagc +cccggttagtaagccagttaa---------------------------------------ctcgcc------ +------------------------------------------------------------------------ +-aagttttac-------------------------------------------------------------- +-------------tacaccc----aggccccttgctcgtgagccgcccacaccaccaccggctctaactccg +g---------------------------------------------tcagtgatccggcgaacccgtctagc +cttactacatataag-------------------------------------ccccccgtccgtaagtcgcc +cacaccacc--------------------------------------accggcccgcactcgccggc----- +-------------------tcctttacacatacccagatggggccaaggtgtatgcaggttctttgttcgag +tcagattgtgactggctggttaacgcatctaaccctggccaccgtcctggcggaggtctctgccatgcattt +taccagcgtttcccggaatcgt------tccatccgactgattttgttatgcgtgaggg---tcttgccgca +tatactctgagcccgcgcccgatcatccatgctgtggcccccgactacagggttgagcagaaccccaagagg +cttgaggcggcatatcgtgagacctgctcccgtctcggcacagctgcttatcctctattggggtcagggatt +taccaggtccctgtaagtttaagtttcgacgcttgggagcgcaatcaccgcccaggcgatgaactctatctc +actgagccagctgccgcc-------------------------------------------------tggtt +tgaggccaataagccagccca--------------------------------------------------- +------------------------------------------gccagctttaacgattactgaggacaccgc +cc------------gtacagctaaccttgcgcttgagattg------------actctgctactgaggtggg +ccgagcttgc---gccggttgtactattaaccccgggattgtccactaccagttcactgccggggttcctgg +ctctgggaagtctagatctatacagcagggagatgttgatgtcgtggttgtgccgactcgtgagcttcgtaa +cagctggcggcgccgcggctttgctgcttttacaccccacacagcagctcgcgttactgccggccggcgtgt +tgtgatagatgaggcaccttcgctcccaccgcacttgctgttgctccatatgcagcgggcctcatcggtcca +tctccttggtgaccccaaccagattcctgccattgattttgagcacgctggtttggtcccagcgatccgccc +cgaactagcccctactagttggtggcatgttacccaccgctgccccgccgatgtgtgtgagctcatacgtgg +ggcctaccctaagattcagacgaccagccgcgtgttgagatctttattttggaacgag------cctgcggt +gggtcagaagctggttttcacgcaggctgccaaggctgccaaccccggcgcaatcactgtccatgaggccca +gggtgccacgttcactgagactactatcatagccacggccgacgctagaggtcttattcaatcttcccgcgc +acatgccatcgttgcgcttactcgccacacagagaaatgcgtcattctcgacgctcccggcctgctgcgtga +ggtcggtatttctgatataattgtcaataacttt------------------------------ttcttggc +tggcg--gtgaagtgggccaccaccgcccttccaccataccgcgtggcaatccagaccaaaatttagacac- +-----cttacgggcgtttcccccgtcctgccaaatcagtgcctaccaccaattggctgaggagctgggccat +cgaccggccccagtggccgccgtcctgcccccctgccctgagcttgagcaggggctactctacatgccgcag +gagcttacggtgtccgatagcgtcctaatctttgaactcacggacatagttcactgtcgtatggccgccccc +agtcaacgtaaggcggttctttctacgctcgtcggtaggtatggccgccgaacgaagctgtacgaagcggcc +cattctgatgttcgcgagtctctggggaggtttatccctactatcggaccggtgcaggccaccacatgtgag +ttatatgagctggttgaggccatggtggagaaaggtcaggatggctccgccgtgcttgagctcgacctctgt +agccgagatgtctcacgtattacattctttcagaaggactgtaataaatttacaacaggtgagaccattacc +catggcaaggtgggccagggcatttcggcttggagcaagaccttttgtgctttgttcggcccgtggttccgt +gccattgagaaggagattctggctctacttccacccaatattttctatggcgatgcctacgaagagtcagtg +ttctctgcagctatttctggggccggctccagtatg---gtttttgagaacgatttctctgagtttgatagt +acccaaaataatttttctct------------------cggccttgagtgtgtcattatggaggagtgtggc +atgccccagtggctcatccgactgtatcatctagttagatcagcctggactctgcaggccccgaaagagtct +ttgaaaggtttctggaagaagcattccggcgagcctggcaccctcctttggaacaccgtctggaacatggcg +atcatagcacactgctatgaattccgtgacttgagggtggcagcgtttaagggggacgattcagtggttctt +tgcagtgattaccgccagagccgcaatgcggctaccctgatagccggctgtgggttgaaactgaaggttgat +taccggcctataggtctgtatgccggtgttgtagtggccccgggcctcggtgcacttcctgatgttgtccga +ttcgccggtcgattatctgagaagaactggggcccgggccctgagcgcgccgaacagctgcgcctggcagtt +tgtgatttccttcgagggttgacgaatgtggcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +cggtgttagccctgggctggtgcataaccttattggcatgctacagactattgctgacggaaaggcccattt +taccgagactgtcaaacctgtgctggatcttacaaactctatcatacagaggttggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggttgttct +gttgctgctcttcgtgtttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcagtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaacccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------gctggggctgcgccgctaac +cgctgtttcaccagcgcccgatacagccccggttcctgatgttgactctcgtggtgctattttgcgccgcca +gtataatctatctacctcccctctgacttcatctgtcgcctctggaactaatcttgtcctgtacgctgctcc +gcttaatcctctcctgccccttcaagacggtactaatactcatatcatggcaactgaagcgtctaactatgc +tcagtatcgagttgtccgggctacaatccgctaccgtcctttggtgccgaatgctgtcggtggttatgcaat +atctatttctttctggccccaaaccacaactacacctacctctgttgatatgaattctattacttctactga +tgttaggatattagtccagcctggcatagcttctgagttggtcatcccgagtgagcgccttcactaccgtaa +tcagggctggcgctctgtcgagacctcgggtgtggccgaggaggaggcgacatcaggtctggtcatgctttg +tattcatggttcccctgttaactcttatactaacacgccctataccggggcactggggcttcttgattttgc +acttgagcttgagtttagaaatctgactcctgggaacactaacacccgtgtatcccgctacaccagcacggc +ccgacaccgcctgcgccgtggtgccgatgggacggctgagcttacaaccactgcagccacacgttttatgaa +ggacctgcatttca---ccgggacgaat---ggtgttggcgaagtgggtcgtggtatagccctaacgttatt +caatcttgctgatacacttctcggcgggctaccgacagaattgatttcgtcggctggaggtcagttatttta +ctcccgcccagttgtctcagccaatggcgagccgactgtaaagttatacacctctgtcgagaatgcacagca +ggacaagggtatcgctataccacatgatatagacttaggggactcccgtgtggtcattcaggattatgataa +tcaacatgagcaggaccggcctaccccgtcaccggccccgtcccgccccttttcggtcctccgagccaatga +cgtcctgtggctctc-----------------------------tttgactgcagccgaatatgat------ +cagaccacttatggctcgtcgactaatcccatgtatgtatcagatactgttacatttgt---taatgtggcc +acgggtgcccaggctgtcgcccgttctcttgattggtccaaggttactttagatggccggcctcttactacc +at-----ccagcagtactctaagacattctatgtgt-tgccgcttcgcggcaagctctccttttgggaggct +ggcactactaag--gccggttacccttataattataatacaactgctagtgatcagattttgattgagaatg +ctgccggccat------cgtgtagccat-ttctacctacactactagtcttgg--------------tgctg +gccctgtgtcagtttc-tgcggtcggcgttctcgctccgcactctgctttagctgtgcttgaagacaccatt +gatt---------accctgtccgtg----gtcctactttttattatttttgccctgagtggcgcaatc---t +tcgtctacaaagctgtgcttttcatct--------cactgatgctgaacttcaccctct------------- +--------taaaatgaaggtaggtaagacccgggagtcctaattaa-tt----tc-ccct-t---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355394.1/17280/1-7280 |Hepeviridae isolate HESQL045, complete genome +--------------------------------------------------------------ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggtccggccgtttttatcccgtgttcaaactgatatcct +tattaacttgatgcaacctcgacaacttgtgttccggcccgaagttctctggaatcatccgatccagcgagt +tatacacaatgagctggagcaata---ctgccgagccc-gcgctggccgttgtcttgaagtgggtgcccacc +caagatctattaatgataaccccaatgttttgcaccggtgctttctccgtccggttggaagagacgtccagc +gctggtactccgcccccactcgaggtccggcggccaattgccgccgttctgcgctacgcggtttgccccctg +tcgatcgcacatattgcttcgacgggttctcccgctgcgccttcgcagctgagaccgggatcgctctatact +cactgcatgacctctggccatcggatgttgcggaggctatggcccgccatgggatgacgcgcttgtatgctg +ccctccaccta-ccccctgaagttctgttaccgcctggaacttatcacacaacttcctatcttctgattcac +gacggcaatcgtgccgtcgtgacttatgagggggatactagtgcgggttataaccacgatgtgtctatactt +cgtgcatggattcgcaccaccaaaatagttggtgatcacccgctggtaatagagagggtccgcgccattggc +tgccattttgtcttactcctcactgcagcccccgagccgtccccaatgccttatgttccgtaccctcgctca +acagaggtgtatgttagatccatatttggccctggc---------gggtcgccttctcttttcccgtcagcc +t----------gctctaccaagtcta-catttcatgccgtcccggtccatatttgggatcggcttatgcttt +ttggtgctaccttagatgaccaggccttttgctgctcgcggcttatgacctacctccgcggaattagttata +aagtgaccgttggcgcacttgtcgccaacgaaggctggaatgcctctgaggatgcgctaaccgctgtgatta +ctgcagcgtatttgactatctgtcatcagcgctacctacgaacacaggccatttctaaaggcatgcgccggc +tagaggttgagcacgcccaaaagtttatcacaaggctatatagttggttgtttgaaaagtc---------ag +gccgtgattatattcccggtcgccagctccaattttatgcgcagtgccgccgttggctctcggctggctttc +atctggaccctagggttctcgtctttgacgaggcggtcccctgc---cgatgccgtagcttcctaaagaa-- +----ggttgccgggaaattttgctgctttatgaagtggctcgggcagga------gtgcacttgtttcttgg +----------------agccagcggaaggcctggttggtgactgtggc--------catgacaatgaggcct +atgaggggtccgaggtagaccccgccgagcctgctcaccttgatgtctctgggacttatgcggtccacggcc +gtcagcttgaggccctatatagagcacttaatatcccagatgacattgcagcccgtgcgtcacgtctaacgg +ctaccgtggagcttgccgccagtccaggcagactcgaatgccgcacggtgcttggaaataagatattccgca +catcaataactgatggtgcccatctcgaggccaacggtcc------------------------tgagcagt +acgtcctgacatttgatgattctcgccaagtgatgggagctgggcctcacagcctcacgtatgaacttgtcc +ctgctggtctgcaggttaaaatatcttct-------aatggcctggattgtaccgccatattctct---cct +ggcggggcgccgagcgctgcaccaggcgaagtggcggccttctgtagcgccctatacaggtataataggttt +acccagcgccattcgctgactggcgggctgtggctgcaccccgaggggctccttggcttgttcccccctttc +tccccggggcacctttgggagtctgcaaaccccttttgtggtgagagcacactttatacacgaacctggtct +acatctggtttttctagcaacttctccccacccgaggcggcttatgccgccccagtccctgacgc----ggg +gttaacctcgagtgccccctcctccgctagtgatat-----------------ctgggtgtt---------- +---------tccaccgccc----tctgaggggt--------------cggcgaccattccgccacccataac +cccggtcggtaagccaactaa---------------------------------------tccatt------ +------------------------------------------------------------------------ +-tggtcatac-------------------------------------------------------------- +-------------tacacct----aggccacccgtccgtgagccgtctacaccgccgccggccctaacccca +g---------------------------------------------ttagtaagccagctaacccgcctggc +cttactgcacctagg-------------------------------------ccccccgcccgcgagtcgcc +cacaccgcc--------------------------------------atcggtgcgcactcgccgac----- +-------------------ttctttatacatatcctgatggggccaaggtgtatgcaggctctttgtttgag +tcagattgctactggctggttaatgcatctaaccccggccaccgtcctggtggtggtctctgccatgcattt +taccagcgcttcccagagtcgt------tttatccgaccgactttgttatgcgcgaggg---tctcgccgca +tacactttgagcccgcgcccgatcattcatgctgtggcccctgactacagggttgagcagaaccccaagagg +ctggaggcggcataccgtgagacctgctcccgcctcggcacagctgcctacccactactggggtcggggatt +tatcaggtccctgtaggtttaagctttgacgcctgggagcgtaaccaccgcccaggcgatgaactctacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagcctaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacaccgc +cc------------gcacagccaaccttgcgcttgagatcg------------actccgctactgaggttgg +tcgtgcctgc---gctggctgcactattagccccgggattgttcactaccagtttaccgccggggttcctgg +ctccgggaagtctaggtctatacagcagggggatgttgatgttgtggtcgtgccaactcgtgagcttcgcaa +cagttggcggcgccgtggctttgctgcttttacacctcacacagcggctcgtgtcactgccggccggcgtgt +ggtgatagatgaagcaccctcgcttccaccgcacctgttattgctccatatgcagcgagcctcatcagtcca +tcttcttggcgaccccaatcagatccctgccattgactttgagcacgccggtttggttccggcgattcgccc +tgagctcgcccctactagttggtggcatgtcacccaccgttgccccgccgatgtgtgtgagctcatacgcgg +ggcctacccaaagattcagacgaccagccgtgtgttgagatctttattctggaatgag------cctgcgat +aggtcagaggctggtttttacgcaggcagctaaagccgccaaccccggcgcgattaccgttcatgaggccca +gggggccacctttactgagactactatcatagccacggccgacgctagaggtcttattcaatcttctcgcgc +acatgccatcgttgcacttactcgccatacagaaaagtgcgttattctcgacgcccctggcctattgcgtga +ggtcggcatttctgatataattgtgaataatttt------------------------------ttcctggc +tggtg--gtgaagtgggccaccatcgcccttctaccatcccccgcggcaacccagatcggaacttagacac- +-----cctccaagcgttccctccgtcctgtcaaattagtgcttaccaccagttggctgaggagctgggtcac +cggccggccccagtggccgccgtcctgcccccctgccctgaacttgagcaggggttactctacatgccgcag +gagcttacggtgtccgatagtgtcctaatttttgaactcacggatatagttcactgccgtatggccgcccct +agtcaacgtaaggcggttctctctacgctcgtcggcaggtacggccgccgaacaaaactgtatgaggcggcc +cattctgatgtccgcgagtctttagggaggttcatccctactatcggaccggtccaggccaccacatgtgag +ctatatgaactggttgaggccatggtggagaagggtcaggatggctccgctgtgcttgagcttgacctctgc +aaccgtgatgtctcgcgtattacatttttccagaaggattgtaacaaatttacaacgggtgagactattgcc +catggtaaggtgggccaggggatttcggcttggagtaaaaccttctgtgctttatttggcccatggttccgt +gccattgaaaaggagattctggccctgctcccacccaatattttctatggcgatgcctatgaggagtcagtg +ttttctgcggccatctctggggccggctcatgtatg---gtttttgagaatgatttttctgagtttgacagc +acccaaaataatttctctct------------------tggccttgagtgcgttatcatggaggagtgtggc +atgccccagtggcttatccgactgtaccatttagttagatcagcctggattttgcaagccccgaaagagtct +ttgaaaggcttctggaagaagcattccggcgagcctggcactctcctctggaacaccgtctggaacatggcg +atcatagcacactgctatgaatttcgtgacttgagagtcgcagcgtttaaaggggatgattcagtggttctt +tgcagcgattatcgtcagagccgtaatgcggccactttgatagctggttgtgggttaaaattgaaggttgac +taccggcctataggtttgtatgccggtgttgtagtggccccgggcctcggggcacttcccgatgttgtccgc +tttgcaggtcgattatctgagaagaactggggtccgggccccgagcgcgccgaacagttgcgcctagcagtt +tgtgattttctccgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacagactattgctgatggaaaggcccactt +taccgagactgtaaagcccgtgctggatcttacaaactctatcatacagaggttagaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgttgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcagtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaatccggggctggagctcgcccta +gacagccggtccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgcctcccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtttcaccggcgcctgacacggccccggttcctgatgttgactctcgtggcgctatcttgcgccgtca +gtataatttgtccacctctcctctaacttcatctgttgcctctggaactaatcttgttttgtacgctgcccc +gcttaatccccttctgcctcttcaggacggcaccaatactcacatcatggcgactgaggcgtctaactacgc +ccagtaccgggttgtccgggctacaatccgctatcgccccttggtgccgaatgccgtcggcggttatgcgat +ctctatttccttctggcctcagactacaactacacccacctctgttgatatgaattctattacttctactga +tgttaggattttagtccagcctggcatagcctctgagttggttatcccgagtgagcgcctccactatcgtaa +tcaaggctggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggcttggtcatgctttg +tattcatggttcccctgttaattcttacaccaacacgccctatactggggcgctggggctccttgattttgc +actcgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgttacactagtacagc +ccggcatcgcctgcgtcgtggtgccgatgggacagctgaacttactaccactgcagccacacgtttcatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggtgaggtgggtcgtggtatagccctaacgctatt +taatcttgctgatacacttctcggtgggttgccgacagaattgatttcgtcggctggaggacaactgttcta +ctcccgcccggttgtctcagccaatggcgagccaaccgtcaagttatatacctctgtcgagaatgcacagca +ggataagggtattgctataccacacgatatagacctaggggattcccgtgtggttatacaagactatgacaa +ccaacatgaacaggaccggcctaccccgtcgccggccccatcccgtcccttctcagtccttcgggctaatga +tgtcttgtggctctc-----------------------------tttgactgcagctgaatatgac------ +cagactacttatggctcgtcgaccaatcctatgtatgtttcagatactgtcacatttgt---taatgtggcg +acaggcgcccaggctgttgcccgatcccttgattggtccaaggtcactctggacggccggccactcactacc +at-----ccagcagtactccaagacattttatgtgc-tgccgcttcgtggtaagctttccttttgggaggct +ggtacgactaag--gctggctacccttataactacaacactactgctagtgaccagattctgattgagaatg +cagccggtcac------cgtgttgctat-atctacttatactactagccttgg--------------cgccg +gccctgtgtctgtctc-ttcaatcggcgttcttgccccgcattctgctttagctgtgcttgaagatactatt +gatt---------atcccgcccgtg----cccatacttttgatgatttctgccctgagtgccgcaatc---t +tggcctacagggctgtgctttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagttttaattaattt----cc-c-c--ctt------gt +gccc-cct--------tc-taat-ct-ct----gc-tt-tgtt----------------att-t-------c +ttttt------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355399.1/17227/1-7227 |Hepeviridae isolate HESQL050, complete genome +--------------------------------------------------------------ggtcgacgc- +---catggaggcccatcaattcattaaggctcctggcattactactgccattgag---caagcagctctggc +tgcggccaattctgccttggcgaatgctgtggtggttcggccgtttttatctcgtgtgcagactgagatcct +tattaacttgatgcagccccggcaattggtatttcgtcctgaggtgctctggaatcatcccattcaacgagt +tatacataatgagttagaacagta---ctgtcgagcta-gggctggccgttgtttagaggtcggagcccacc +caagatctattaatgacaaccctaatgttctgcaccggtgtttcctacgaccagtcgggagggacgttcagc +gttggtactccgcccccacccgcggccctgcggctaactgccgtcgttctgctctgcgtggcctccctcccg +tcgaccgcacctactgtttcgatgggttctcccgctgtgcttttgccgcggagaccggcgtggccctttatt +ctctgcatgacctctggccagctgacgttgcggaggctatggcccggcatgggatgacacgtttgtacgccg +cactacacctt-ccccctgaagtgttgttgccacccggtacctaccacacaacttcgtaccttttgattcat +gatggtgatcgtgctgtcgtgacttatgaaggtgacactagtgcgggatacaatcatgatgtttctatcctc +cgtgcgtggatccgcacgactaaaatagttggtgaccacccgttggtgatagagcgtgtgcgggcgatcgga +tgtcattttgtgttgctactcactgcggcccctgagccgtcacccatgccttatgttccataccctcgatca +acagaggtgtatgtccgctctatttttggccccggg---------gggtccccgtctctgttcccgtcagct +t----------gctctaccaaatcta-catttcatgccgtcccagttcatatctgggaccggcttatgcttt +ttggtgccaccttggatgaccaggcgttctgctgctcgcggctcatgacctatcttcgtgggatcagctaca +aggttactgtaggtgcccttgttgccaatgagggttggaacgcctcagaggacgcccttactgctgttatta +ctgcagcgtatttgaccatctgtcaccagcgctacctccgcacccaggcaatatccaagggtatgcgccggt +tggaggttgagcatgctcaaaagttcattacgagactttacagttggttatttgagaaatc---------ag +gccgcgattatatccccggccgtcagctccagttctatgcgcaatgtcgccgctggctgtcagcaggtttcc +atcttgaccctagggtgcttgtttttgacgagtcagtgccctgc---cgctgtagaacgttccttaagaa-- +----agtcgcgggaaaattttgttgttttatgaagtggctggggcagga------atgtacttgcttcttgg +----------------agccggccgaaggcttggttggtgactgcggc--------catgataatgaagcct +atgagggttctgaagttgaccaggctgaacccgcacatcttgatgtctcggggacctatgctgttcatgggc +gccagctcgaggctttgtatagagcgctcaacattccacatgatattgctgcccgagcatcgcgcctgaccg +ctactgttgagcttgttgcaggcctagaccgtttggaatgccgcactgtgctcgggaataagacctttcgga +caacggtggttgacggcgcccatcttgaggctaacggccc------------------------agaacagt +atgttctttcgttcgacgcctcccgtcagtctatgggggctgggtcgcacagccttacctatgagcttaccc +ccgccggtttgcaggtaaagatctcgtcc-------aatggtctggactgcaccgcaacatttccc---ccg +ggcggggcccccagcgccgcgccgggggaggtggcagctttttgtagcgccctttacaggtacaacagattt +acccagcggcattcgttgacgggcggtttgtggctgcaccctgaggggctgctgggtatcttcccccccttt +tctcccgggcatctttgggagtccgccaaccccttctgcggggaaggaaccctctacacccggacttggtct +acatctggcttttccagtgatttctccccccccgaggcggccacttctgcgccggccgccattca----ggg +gccacctg---atcctaccccccccgccagtgatat-----------------ttgggtgct---------- +---------gccgccactc----tctgaggagt--------------tccaggccgacgtgcaaccagcccc +cctca------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctcccgaacttgcctctctacccagg +cccgttgagcctagg-------------------------------------gtccctgttcgtaagccttc +gtcaccacc--------------------------------------atctcctcgcacccgccgcc----- +-------------------tcctctacacttacccggacggcgctaaggtgtacgctgggtcactgttcgaa +tcagactgcgactggttggttaatgcatcaaaccccggtcaccgccctgggggcggtctctgtcacgcattt +tatcaaaggttccctgagtcgt------tccacccgactgagtttattatgcgtgacgg---tcttgctgct +tacactttgactccccgccccattattcatgcagtggcccctgactatagggttgaacaaaacccaaagagg +ctcgaggcagcgtaccgagagacttgttcccgccgtggaactgccgcctacccacttttaggcgcgggtata +tatcaagtccctgtcggccttagctttgacgcctgggaacgcaaccaccgccccggcgatgagctttatctg +accgaccccgctgccacc-------------------------------------------------tggtt +tgaggctaataagcctacgca--------------------------------------------------- +------------------------------------------gccggctcttacgataactgaggatacagc +cc------------gcacggccaacctggcactggagatcg------------atgctgctacagaggtcgg +ccgtgcctgt---gctggctgcaaagttaacccaggtattgtgcattatcaattcactgctggggttccggg +ctcggggaaatcgaggtctatacagcaaggggatgttgatgtggtggttgtccccacccgggagcttcgaaa +taattggcgccgccgaggttttgccgcctttacaccccacacggcggcccgcgttactacgggccgccgtgt +tgtgattgacgaggccccatcccttccgccacatttactgctgctgcatatgcagcgggcttcgtcggttca +tctccttggcgacccaaatcagatccctgccatagactttgagcatgctggcctggtccccgctatacgccc +tgagcttgcacctaccaactggtggcacgtcacacaccgctgccctgcggacgtgtgcgagcttatacgtgg +agcctaccctaagatccaaactacgagtcgtgtattgcgatctctgttttggaatgag------cccgccat +cggccaaaaattggttttcacacaggctgcgaaggctgccaaccctggtgcgattacagtccatgaggccca +gggcgccaccttcacggagactacaatcatagccacggccgacgccaggggcctcatccaatcttcccgggc +ccatgccatagtcgcacttacccgtcatacagagaagtgcgtcatattggatgcccctggcttgctgcgtga +agtgggcatatcagatacaattgttaacaacttt------------------------------ttccttgc +tgggg--gagaggtaggtcaccatcgcccctctgtgataccccgtggtagtcctggccagaatcttgagac- +-----gttgcaggcttttccaccttcttgccagatcagtgcttaccatcagttagctgaggagcttggccac +cgcccggctcctgttgctgcagttctgcccccctgccctgagctcgagcagggtttgttatatatgccccag +gagctcacggtgtctgatagtgtgttagttttcgagctcacggacatagtccattgccgtatggctgctccc +agtcaaaggaaggctgttttatccacacttgtggggaggtatggccgcaggacgaagttatatgaggcggct +cattctgacgtccgtgagtctctagctaggttcatccccactattgggcccgtccaggctaccacatgtgag +ctatacgaattagtcgaggctatggtggagaagggccaagatggctccgccgtgttggaactcgacctctgc +aatcgcgatgtgtcgcgtattacatttttccaaaaggactgtaataagtttactactggggagaccatcgcc +catggtaaggtcggccagggcatctcagcctggagtaagactttctgtgccctgtttggtccgtggtttcgt +gctatcgagaaagagatactagcactacttccgcctaatatcttttacggcgatgcttatgaggactctgtg +tttgccgctgccgtttccggggcaggaacgtgcatg---gtgtttgagaatgacttctcagagtttgatagt +actcagaacaacttctctct------------------tggtcttgagtgtgtgattatggaggaatgcggc +atgccccagtggctgatccggttgtaccatttggttcggtctgcctggaccttgcaggcgccgaaggagtcc +cttaagggtttttggaagaagcactctggggagcctggcaccctcctctggaacaccgtctggaacatggca +attatagcacactgctatgagtttcgcgatttcaaggttgccgcctttaagggtgatgattcggtggtcctt +tgcagtgactaccgtcaaagtcgcaatgcggcagctttgatcgcaggttgcgggcttaaattgaaagttgac +tatcgtcctattggattgtatgctggtgtggtagtggcccctggtttggggacattacctgatgtggtgcgt +tttgctggccggctttccgagaagaactggggcccgggccccgagcgggctgagcagctacgccttgcggtt +tgcgactttcttcgggggttaacgaatgtggcgcaggtctgtgttgatgttgtatcccgtg-------ttta +tggagttagtcctgggctggtacataaccttatcggcatgctgcaaactattgctgatggtaaggctcattt +cacagagactgttaaacctgtgcttgacctcacaaactctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgtgccctagggctgtttt +gttgctgttcctcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgactggcc------------gtcgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgttccgcaacccggggctggagctcgccctc +gacagccaccccg---------------tcccctcggttcctcttggcgcgatcagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctgcccca---------gccggggctgcgccgctgac +tgccgtatcaccggctcccgacacagctcctgtgcctgatgtcgattcgcgcggcgctatattacgacggca +gtataacctttctacgtctccgcttacatcatctgttgcttcaggcaccaacttagttctatatgctgcccc +actaaaccctcttctccctcttcaggatggcaccaatactcatattatggctactgaggcatctaattatgc +ccagtaccgggttgttcgagctacgatccgttaccgccctctggtgccgaatgctgtcggcggctacgcaat +ttctatttctttttggcctcagactactaccacccccacatccgttgacatgaactctattacttccactga +tgtcaggattctggtccaacccggtatcgcctccgaattggttatccccagcgagcgcctccattaccgtaa +tcagggatggcgctctgttgagacttcaggggtggccgaagaggaggctacctcaggtttggtaatgctttg +catccacggctctcccgttaattcttacaccaacaccccctacactggggcgcttgggcttcttgactttgc +actggagcttgagtttaggaacttgacacccgggaacactaacacccgtgtgtcccggtatacaagcacagc +ccgtcaccggctgcgccgcggcgccgatggcaccgctgaacttaccactacagcggccacacggttcatgaa +ggatttacatttca---ccggtacgaat---ggggtcggtgaggtcggccgtggtattgccctgacactgtt +caaccttgctgacacgcttctcggaggtttgccgacagaattaatttcgtcggccgggggtcagttatttta +ctcccgccctgttgtctcagccaatggcgagccgactgttaagttatatacatctgttgagaacgcgcagca +ggataaaggtattgccatcccacatgatatagacctgggtgattcccgtgtggtcatccaggactatgataa +ccaacatgagcaggatcggccgactccctcgcccgccccgtctcgtccattctctgtccttcgtgctaatga +tgtcttgtggctttc-----------------------------tcttaccgctgctgagtatgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctcggacactgtaacatttgt---caatgtggcc +acaggggcccaggctgttgctcgctctcttgactggtctaaggtcaccctggacggccgccctctcactact +at-----tcagcagtattccaaaacattctatgttc-tcccgcttcgcgggaaattatctttctgggaggcc +ggcacaaccaag--gctggctacccttataattataatacaactgctagtgatcaaattttgattgaaaatg +cagctggccac------cgtgtcgctat-ttccacctacaccactagtttggg--------------tgctg +gccctgtgtcggtctc-tgcagtaggtgtattagccccacactcggcacttgctgttctggaggacactgtt +gact---------accccgctcgcg----ctcatacttttgatgacttttgcccggagtgtcscaccc---t +tggtttgcaggggtgtgcttcccagtc--------caccgttgctgagcttcagcgcct------------- +--------taaatgaaaggtaggtaaaaccccggagtcttaattaa-tt----c--cctt-tct------gt +gccc-cct--------tt-ataa-ctttc---tgc-t----t----------------attt-t-------t +tcttttcg----gt----------------tcccgcccccccgga---------------------ataaaa +aaaaaaa---------------aaaaa--------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355400.1/17257/1-7257 |Hepeviridae isolate HESQL077, complete genome +--------------------------------------------------------------ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcattacaactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttctatctcgtgttcaaactgatattct +tattaacctgatgcaaccccggcaactcgtgtttcgacctgaagttctctggaaccacccgattcagcgagt +catacataatgagctggagcaata---ctgcagagccc-gcgctggtcgctgccttgaagtgggcgctcatc +cgagatccatcaatgacaaccctaatgttctgcaccggtgcttcctccgcccggttgggagagacgtccagc +gctggtattctgcccctacccgtggcccagcggctaattgccgtcgttctgcgctacgtggtttgccccctg +tcgaccgcacatactgtttcgacgggttctcccgctgcgcttttgccgctgagaccgggattgctttatatt +cactgcacgatctctggccttcagatgttgcggaggccatggcccgtcacgggatgacgcgcctatacgccg +tcctccatctc-ccccctgaggtcctgttaccacctggtacctatcacacaacctcttaccttctgatccac +gacggtgatcgtgcagttgtgacttatgagggggacaccagtgcgggctataaccatgatgtttctatactt +cgtgcttggatccgcaccactaaaatagttggtgaccacccgttggtgatagagagggttcgcgctattggc +tgccattttgttctgcttcttactgcggcccccgagccatctcctatgccttatgtcccgtatcctcgttca +acagaggtatacgttaggtccatatttggccctggt---------gggtcgccctcccttttcccatcagcc +t----------gctctactaaatcca-cattccatgctgtcccagtccatatctgggaccggctcatgcttt +ttggtgccaccctagatgatcaggccttttgctgctcgcggcttatgacctacctccgcgggattagttata +aagtgaccgttggcgcacttgttgccaacgagggctggaatgcctcggaggacgcgcttactgctgttatca +ccgcagcgtatctgaccatttgccatcagcgttacctccgaactcaggctatttccaagggcatgcgccggc +tagaggtagagcacgcccagaagtttattacaaggctgtacagttggttgtttgagaagtc---------ag +gccgtgattacatccccggccgccagcttcagttttatgcacaatgtcgccgttggctctcggctggtttcc +atctagaccctagagtactggtttttgacgaggcggtcccctgc---cgctgccggagtttcctaaagaa-- +----ggtagccggcaaattttgttgcttcatgaaatggctggggcagga------gtgcacctgttttctgg +----------------agccagcggaaggtttggttggcgactgtggt--------cacgacaatgaggctt +acgaggggtctgaggtggaccccgctgagcctgcccaccttgatgtttctggaacttatgcagttcatggcc +gtcaactcgaggctctatatagagcgctgaacatcccgcacgacattgcggcccgtgcatcacgtttgacgg +ccactgtagagctcgtcgccagcccaggccggctcgaatgtcgtacggtgctcgggaataagacttttcgta +catcgataattgatggtgcccatctcgaggccaatggccc------------------------cgaacagt +atgttttgacatttgatgactctcgccaggcgatgggtgctgggccccacagcctcacgtatgaactcgtcc +ctgccggcctccaagttaaaatatcttcc-------aatggtctggactgtaccgcagtattccct---cat +ggcggggcaccaggcgctgcaccgggtgaagtagcggctttttgcagtgccttatacaggtataataggttc +acccagcgccattcgttgaccggcgggctgtggctgcaccccgaggggcttcttggtctattcccccctttc +tcccctgggcatctttgggagtccgcgaaccctttctgcggcgagagtacactttacactcgaacctggtct +acatctggattctctagtgacttctctccccctgaggcggcttttaccgccacagtccccaccgc----ggg +gctaccctcgagtactccctcctctgctagtgatgt-----------------ctgggtgtt---------- +---------tccgccgccc----tctgaggagt--------------cggtgaacgttctaccgcccgaagc +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttagtaagcctgctgatccgcccaat +cttgttacacctaag-------------------------------------cctcccgttcgtaagccacc +tacaccacc--------------------------------------acaggcccgtactcgtcggc----- +-------------------tcctctatacctatcctgatggggccaaggtgtatgcgggctctctgtttgag +tcagattgcgattggctggtcaatgcatctaaccctgggcaccgccccggcggtggcctttgccatgcattt +taccagcgtttcccggagtcgt------tccatccgactgattttatcatgcgtgaggg---tctcgccgca +tacaccttgagtccgcgtccgatcatccatgctgtggcccctgattatagagttgagcagaacccaaagagg +ctagaggcggcatatcgtgaaacctgttcccgcctcggcacagctgcctacccgctgctcgggtcagggatc +tatcaggtccctgtaagtttgagtttcgacgcctgggagcgtaatcaccgccctggcgacgagctttacctt +actgaaccagctgccgcc-------------------------------------------------tggtt +tgaagctaataagccaactcg--------------------------------------------------- +------------------------------------------gccagccttaacaattactgaggatgccgc +cc------------gcacagccaacctcgcgctcgagattg------------actcggccaccgaggtggg +ccgcgcctgc---gccggtcgtactgttagctctggagttgtgcactatcagtttactgccggggtccctgg +ctctgggaagtctagatctatacagcagggggaggtcgatgttgtggtcgtgccaacccgcgagctccgtaa +tagctggcggcgtcgtggttttgctgcttttacacctcatacagcagctcgtgttacaactggtcggcgtgt +tgtaatagatgaggcaccctcgcttccaccgcacttgctgctgctccacatgcaacaggcctcgtcggtcca +cctcctcggtgaccccaatcagattcccgctatcgactttgagcacgctggcctggtcccggcgattcgtcc +tgagcttgcccctaccagctggtggcatatcacccatcgttgccctgccgacgtgtgtgagcttattcgcgg +ggcctacccaaagatccagacgactagtcgtgtgctgcggtctttgttttggaacgag------cccgcagt +gggtcaaaggctggtcttcacgcaggcagccaaggcggccaaccccggcgcaattactgttcatgaggccca +gggcgccacattcacagagactactattatagccacggccgatgctagaggcctcatccaatcctcccgcgc +acatgctatcgtcgcgcttactcgccatacagaaaagtgtgtcatccttgacgcccctggcctattacgtga +ggtcggcatctcagatataattgttaataacttt------------------------------ttcctagc +tgggg--gcgaagtgggccaccaccgcccttctgtcgtaccccgcggcaacccagaccagaatttagacac- +-----cctacgagcttttcccccatcctgtcaaattagtgcatatcatcagctggccgaggagctgggccac +cggccagccccagtggctgccgttttgcccccttgccctgagcttgagcaggggctactttacatgccacaa +gagctcacagtgtctgatagtgttttggtttttgaactcacggacatagttcattgccgtatggcagctccc +agccaacgtaaggcgatcctttcgacgctcgtcggtagatacggccgtcgaacaaagctgtatgaagcggct +cattctgatgttcgtgagtccttagggaggtttatccctactatcggaccggtccaggccaccacttgtgag +ctatacgagctggttgaggccatggtggaaaagggccaagatggctcagctgtgcttgaactagacctctgc +agccgcgatgtctcacgtatcacattcttccagaaggattgtaataaattcacaacaggtgagactatcgct +cacggtaaggtgggccagggcatctcggcttggagcaaaaccttctgtgccctatttggcccgtggttccgc +gccattgagaaggagattctggctctgcttccacccaatattttctatggcgatgcttatgaggagtcggtg +ttttctgctgctatttctggagcgggctcaagtatg---gtttttgagaatgacttttctgagtttgatagc +acccaaaataatttctccct------------------tggccttgagtgcgccattatggaagagtgcggc +atgccccaatggcttattcggctgtaccatctggttagatcagcctggactctgcaggccccgaaagagtct +ttgaaaggtttttggaagaagcattccggtgagcctggcaccctcctttggaacaccgtctggaacatggca +attatagcgcactgctatgaattccgtgatctgagagtggcagcgtttaaaggggatgattcagtagttctt +tgcagtgactaccgccaaagccgtaatgcagctgcccttatagccggctgtggattgaaactgaaggttgat +taccgtcctataggtttgtttgccggcgttgtcgtggctcctggcctcggggcactccctgatgtcgtccgg +ttcgccggccggctatccgagaagaactggggtcctggccctgaacgcgccgaacagttgcgcttagcagtt +tgtgatttccttcgagggctgacgaatgttgcgcaggtctgtgttgatgttgtatcccgtg-------tcta +tggggtcagtcctgggctggtacataaccttattggtatgctacaaactattgctgatggaaaagcccactt +cactgagaatgtcaagccagtattggatcttacaaattctattatacagaggttagaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgtcatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggtc------------gccgtcgcgggcg-gcgcagcggcggtgc +cagcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaacccggggctggaactcgccctc +gacagccgacccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------gctggggctgcgccgttaac +tgctgtgtcaccggcgcctgatacagccccagtccctgatgttgattctcgtggcgctattttacgccgcca +atacaatttgtccacatctcccctgacttcgtctgttgcttctgggactaatcttgttttgtatgccgctcc +gcttaatcctctcttgccccttcaagatggcactaatactcacatcatggcgaccgaggcatctaattacgc +ccagtaccgagttgtccgggccacaattcgctaccgccctttggtgccgaatgctgtcggtggttatgcaat +ttctatctccttctggcctcagaccacaaccacacccacctctgttgacatgaattctattacttccactga +tgttaggattttagtccagcctggtatagcctctgagttagttatcccgagtgagcgccttcattaccgcaa +tcaaggctggcgctctgtcgaaacttcgggtgtggccgaggaggaggcaacatcaggtctggttatgctctg +tattcatggctcccctgttaactcttacaccaacacgccctatactggggcactggggctcctcgacttcgc +gcttgagcttgaattcagaaatctcacccctggaaacactaacacccgtgtttcgcgctacactagtacggc +tcgacaccgcctgcgccgtggtgccgatggcacggctgaacttacaaccactgcagccacacgttttatgaa +agatctgcatttca---ccgggacgaac---ggtgttggtgaagtgggtcgtggtatagccctaacgctgtt +taatcttgctgatacgcttctcggcgggttgccgacagaattgatttcgtcggccggaggccaactgtttta +ctcccgcccggtcgtctcagccaatggcgagccaactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggtattgctataccacatgatatagatttaggggattcccgcgtggttattcaagactatgacaa +tcaacatgagcaggaccggcctacaccatcaccagccccgtcccgccctttttcggtcctccgagcaaatga +tgttttatggctctc-----------------------------tttgactgcagctgagtatgat------ +cagaccacctatggctcgtcaaccgaccctatgtatgtttcagacactgtcacatttgt---taatgtggcg +acaggtgcccaggcggtcgcccgctcccttgattggtctaaggtcactctagacggccgacctcttactacc +at-----ccagcagcactccaagacattttatgtgc-tgccgcttcgtggcaaactttccttttgggaggct +ggtacgactaag--gcaggctacccctataattacaacaccacttctagcgaccagatcctgattgagaatg +cagctggccat------cgtgttgccat-atctacttatactactagtcttgg--------------tgccg +gccctgtgtcagtttc-tgcggttggcgttcttgccccgcactctgccttagctttgcttgaagatactatt +gact---------accctgctcgtg----cccatacttttgatgacttctgccctgagtgccgtaatc---t +tggcttacagggctgtgcttttcaatc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-cct--gtc------gt +gccc-cct--------gc-taag-ct-gt----ac-ca-ttt----------------aata-tatacaaat +tcatctgca---gcgg--------------tccccgccccccccg---------------------aaaaaa +aaaaaaa---------------aaaaaaagaa---------------------------------------- +------------------------------------------aaaaaaaatgt------------------- +------------------------------------------------------------------------ +----------- +>MW355401.1/17207/1-7207 |Hepeviridae isolate HESQL066, complete genome +--------------------------------------------------------------ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +agcggctaattccgccctggcgaatgctgtggtggtccggccgtttttatctcgtgttcaaactgagatcct +tattaacctgatgcaaccccgacagcttgtgtttcggcctgaggtcctctggaaccatccgatccagcgagt +tatacacaacgagctggagcagta---ctgccgagccc-gcgctggccgttgtcttgaggtaggcgctcacc +caagatccattaatgacaaccccaatgtcctacaccggtgctttctccgcccggttggaagagacgtccagc +gctggtactccgctcccacccgtggtccagcggccaattgccgccgctctgcgctacgtggtctgccccctg +tcgatcgtacatactgttttgatgggttttcccgctgcgcctttgccgctgagaccgggattgccttatact +cattgcatgacctttggccctcggacgttgcagaggctatggcccgccatgggatgacgcgcctgtacgccg +ccctccaccta-ccccctgaggttttgttaccacctggcacttaccacacaacctcctatcttttgattcac +gacggcaaccgtgctgtcgtgacctacgagggggacactagtgcgggttataaccacgatgtgtctatactt +cgtgcatgggtccgtaccactaaagtagttggtgatcatccactggtaatagagagggttcgtgccatcggc +tgccattttgttttactccttactgcagcccccgagccatccccaatgccttatgtcccgtaccctcgttca +acagaggtgtatgttagatccatatttggccctggc---------gggtcgccatctctctttccatcagcc +t----------gctccaccaagtcta-cattccacgctgtcccggttcatatctgggaccggctcatgcttt +ttggtgccaccttagatgatcaggccttttgttgctcccggctcatgacctatctccgcgggattagctata +aagtgaccgttggcgcacttgtcgccaatgaaggctggaatgcctcggaggatgcgcttaccgctgtgatta +ctgcagcgtatttgactatctgtcaccagcgctacctacgaacacaggccatttccaaaggcatgcgtcggc +tagaggtcgagcatgcccaaaagtttatcacaaggctatatagctggctgtttgaaaagtc---------ag +gccgtgactacatccctggtcgccagctccagttttacgcgcagtgtcgccgttggctctcggctggcttcc +atctggaccctagagttctcgtctttgatgaggcggtcccctgc---cgctgccggagcttcctaaagaa-- +----agttaccgggaaattttgttgttttatgaaatggctggggcagga------gtgtacttgttttctgg +----------------agccagcggaaggcctggtcggtgactgcggt--------catgataatgaggcct +atgaagggtctgaggtggaccccgccgagcctgttcaccttgatatttccgggacctatgcggtccacggcc +gtcagcttgaagctctatatagagcgcttaatatcccagatgacattgcggctcgtgcgtcacgcctgacgg +ctactgtggaacttgctgccagtccaggccgactcgagtgccgtacggtgcttgggaataagaccttccgca +catcaataactgacggtgcccacctcgaggccaacggtcc------------------------tgagcagt +atgtcttgacatttgatgattctcgccagatgatgggggctgggccccacagccttacgtatgaacttgttc +ctgctggtctgcaggtcaaaatatcctct-------aatggcttggattgtactgctgtattcccc---cct +ggcggagcgccaagcgctgcaccatgtgaagtggcggccttctgtagcgccctatacaggtataataggttc +acccagcgccattcgttgaccggtgggctgtggctacaccctgaggggctccttggcctgtttcctcctttc +tcccctgggcatctctgggagtctgcaaaccccttttgcggtgaaagtacgctttacacacggacttggtcc +acatcaggtttctctagcgacttctccccacccgaggtcgcttgtgcagcaccggcccctgacat----agg +gttaccctcgggtaccccttcgtccgctggcgatat-----------------ctgggtgtt---------- +---------ttcaccgccc----tctgaggggt--------------cggcgaccgtaccgccgcccgtaac +cccggttagtaagccagccga---------------------------------------ttcgcc------ +------------------------------------------------------------------------ +-tagtctaat-------------------------------------------------------------- +-------------tataccc----aggccccccgtccgtgagccgcccacgtcatcgccggtcctaccctcg +t---------------------------------------------tcggtaaaccagctaacccacctagt +cttactacctctaga-------------------------------------cccctcgtccgcgagccgcc +tacacctcc--------------------------------------aacgacccgtacccgccggc----- +-------------------tcctttatacatatcctgatggggccaaggtgtatgcaggctctttgtttgag +tcagattgcgactggttggttaatgcatctaatcctggccatcgccccggtggtggcctttgtcatgcattt +taccagcgcttccctgagtcgt------ttcatccgactgactttgtcatgcgtgaagg---tctcgccgct +tacactttgagcccgcgcccgatcattcatgctgtggcccccgactacagggttgagcagaaccccaagagg +ttagaggcggcataccgtgagacctgttcccgccttggcacagctgcctacccgctactggggtcggggatt +tatcaggtccctgtaggcttaagctttgacgcttgggagcgtaaccaccgcccgggcgatgaactctacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggataccgc +cc------------gcacggctaaccttgcacttcagattg------------attctgctaccgaggtggg +tcgtgcctgc---gctggctgcactattaaccctgggattgtccactaccagtttactgctggggtccccgg +ctccgggaagtctaggtctatacagcagggggatgttgatgttgttgtcgtgccgactcgagagctccgtaa +cagctggcgacgccgcggttttgctgcttttacaccccacacagcagctcgtgtcaccgccggccggcgtgt +ggtgatagatgaggcaccttcacttccaccgcacttgctcctgcttcatatgcagcgggcctcttcggtcca +ccttcttggtgaccccaaccagattcctgccatcgattttgagcacgctggtttggtcccagcgattcgccc +tgagctagcccctactagttggtggcacgttacccaccgctgccccgctgatgtgtgtgagctcatacgcgg +ggcttacccaaagattcagacgaccagccgcgtgctgaggtctttattttggaatgag------cctgcagt +gggtcagaggctggttttcacgcaggcagccaaggctgctaaccctggcgcaattactgttcatgaggctca +gggcgctacatttactgagactaccatcatagccacggccgatgctagaggtcttattcagtcctcccgtgc +acacgccatcgttgcacttactcgccacacagaaaaatgcgtcattcttgacgcccctggcctgttgcgtga +ggtcggcatttctgatataattgttaataacttc------------------------------ttcctggc +tggtg--gcgaagtgggccaccatcgcccctctgttatacctcgcggcaacccagaccagaacttagacac- +-----cctacaagcattccctccgtcctgccaaattagtgcctaccaccagctggctgaggagctgggccat +cggccggctccagtagccgccgtcctgcccccctgccctgagcttgagcaggggttactctatatgccgcag +gagcttacggtgtctgatagtgttctagtttttgagctcacggacatagttcactgccgtatggccgccccc +agtcaacgtaaggcggttctttctacgctcgtcggcaggtacggccgccgaacgaagctgtatgaagcggcc +cattcagatgtccgcgagtctttaaggaggttcatccctactattggaccggtccaggccacaacatgcgag +ctatatgagcttgttgaggccatggtggagaagggccaggacggctccgccgttctcgagcttgacctctgt +agccgtgatgtctcgcgtatcacatttttccagaaggattgtaataaatttacaacgggcgagactatcgcc +cacggcaaggtgggccagggcatctcggcttggagtaaaaccttttgtgctttatttggcccgtggttccgc +gccattgagaaggagatcttggcccttctcccgcccaacattttctatggcgatgcttatgaggagtcagtg +ttttctgcagccatttctggggctggctctagcatg---gtttttgagaacgatttttctgagttcgatagc +acccaaaataactactctct------------------aggccttgagtgcgttattatggaggagtgtggc +atgccccagtggcttatccgtttttaccacctagtcagatcagcctggaccctgcaagccccgaaagagtct +ttgaaaggtttctggaagaagcattccggcgagcctggcaccctcctttggaacaccgtctggaacatggcg +atcatagcacattgctatgaattccgtgacttgagagtggcagcgttcaagggagatgattcagtggttctt +tgtaatgattaccgtcagagcggcaatgcggccaccttgatagccggatgtgggttgaagttgaaggttgat +taccggcctataggtttgta---------------------------------------------------- +-----------------------------------------------------------gcgcctagcagtt +tgtgacttccttcgaaggatgacgaatgttgcgcaggtctgtgttgatgttgtgtcccgtg-------ttta +tggagttagccccgggctggtgcataacc---ttggcatgctgcagactattgctgacgggaaggcccattt +tactgagactgtcaagcctgtgctggatcttacaaactctatcatacagaggttagaatgaataacatgtc- +t----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gttgttgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaatccggggctggagctcgccctc +gacagccggttcg---------------gcccctcggctcctcttggcgcgaccagtccca----------- +------gcgcccccccgccaccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtttcaccagcgcctgatacagccccagttcctgatgttgactctcgcggcgctatcttgcgccgcca +gtataatttgtccacttctcccctgacttcgtctgtcgcctctggaactaatcttgtcttgtatgccgcccc +gcttaatcctcttttgcctctccaagacggcactaacactcacattatggcgaccgaggcgtctaattacgc +ccagtaccgggtcgtccgggccacaatacgctatcgccctttggtgccaaatgccgtcggtggctatgcaat +ctctatttctttctggccccagactacaactacacccacctctgttgatatgaattctattacttctacaga +tgttaggattttagtccagcctggaatagcttctgagctggttatcccgagtgagcgccttcattatcgcaa +tcagggctggcgctccgttgagacatcgggtgtggctgaggaggaggcgacttcaggcttggttatgctctg +tattcatggttcccctgttaattcctataccaacacgccctatactggggcattggggctccttgactttgc +actcgagcttgaatttagaaatttaactcctgggaacactaacacccgtgtgtcccgttacactagtacagc +ccggcatcgtttgcgccgtggtgctgatgggacggctgagcttacgaccactgcagccacacgttttatgaa +ggacctgcatctca---ccgggacaaat---ggtgttggtgaggtgggccgtggtatagccctaacactatt +caatcttgctgatacacttctcggcgggttgccgacagaattgatttcgtcggctggaggtcaactgtttta +ctcccgcccggttgtctcagccaatggcgagccgactgtcaagttgtacacctctgtcgagaatgcacagca +ggacaagggcattgctataccacatgacatagatttaggagattcccgtgtggttatacaagactatgataa +ccaacatgaacaagaccggcctactccatcgccggccccgtcccgccccttttcagtccttcgagccaatga +tgtcctatggctctc-----------------------------tctgacagcggctgaatatgac------ +cagactacttatggttcgtcgaccaaccctatgtatgtctcagacactgtcacatttgt---caatgtggct +acgggtgctcaggctgtttctcgatcccttgattggtccaaggtcaccttggatggccggccactcactacc +at-----ccagcagtattccaagacattttacgtgc-tgccgcttcgtggcaagctttccttttgggaagct +ggtacgactaag--gctggctacccttataattataacactactgctagtgaccagattctgatcgagaatg +cagctggccac------cgtgttgctat-atctacttatactactagtcttgg--------------tgccg +gccctgtgtctgtttc-tgcagtcggcgttcttgctccgcattctgctttagctgtgcttgaagatactatt +gact---------atcctgcccgtg----cacatacttttgatgatttctgccctgagtgccgtaatc---t +cggcttgcagggctgtgcctttcagtc--------tactatcgctgagcttcagcgtct------------- +--------taaaatgaatgtaggtaagacccgggagtcttaattat-tt----cc-cct--ttt------gt +gccc-cct--------tc-taaa-tcttg----ca-cc-tgtt---------------a-tt-a-------a +ttatatct----gcg---------------ttcgc-cgctccgac---------------------gaaaat +aaatta----------------gcagaaac------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355402.1/17167/1-7167 |Hepeviridae isolate HESQL209, complete genome +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagttggtttttcgacctgaagtgctctggaatcatcctatccaacgggt +tatccataatgaacttgaacaata---ctgtcgggccc-gggctggtcgttgcctggaggttggggcccacc +caagatctattaatgataacccaaatgttctgcaccgatgctttttacgaccggttgggagagatgttcagc +gctggtactctgctcctacccgtggtcctgcggctaactgccgtcgttctgccttgcgaggccttcctcccg +ttgatcgcacctattgttttgatggattctcccgctgctcatttgccgcagaaactggggttgccctttatt +ctctgcatgacctctggccggccgatgttgcggaggctatggcccgacacgggatgacacgcttgtatgctg +cactacatctc-ccccctgaagtgctactaccacccggtacttaccatacaacttcatatctactgattcac +gacggtgaccgtgctgttgtgacctacgaaggtgatactagtgcaggctacaaccatgatgtctccatactt +cgtgcatggatccgcacaactaagatagtcggcgaccatccgctagtgatagagcgtgtgcgggctataggc +tgccattttgtgctgctgcttactgcagcccctgagccgtcaccaatgccttatgtcccatacccccggtcg +acagaggtgtatgtccgctctatattcggccctggc---------gggtccccatccctattcccatcggct +t----------gctctacgaaatcta-catttcacgctgtcccggttcatatctgggaccggctcatgcttt +ttggcgctactctggatgatcaagcgttctgctgttcacggcttatgacctacctccgcgggattagttaca +aggtcactgttggcgcccttgttgctaacgaggggtggaatgcctcggaggacgctcttaccgctgtcatta +ctgcagcgtatttgaccatctgccatcagcgctacctccgtactcaggctatatccaagggtatgcgccgac +tggaggttgagcatgcccaaaagtttattacaagactttatagttggctgttcgagaagtc---------cg +gccgtgactacatccccggccgccagctccagttctatgcacagtgccgccgttggctatcggcgggtttcc +atcttgacccaagggtgcttgtttttgatgagtctgtgccctgc---cgttgtaggacgtttcttaagaa-- +----ggctgtgggcaagttctgctgctttatgaagtggttgggacagga------gtgcacctgctttctgg +----------------aaccagcagagggtctagttggcgaccatggc--------cacgataatgaagcct +atgaaggctctgaggtcgatcaggccgagcccgcccatcttgatgtttctgggacttatgccgtccatggcc +gccaactcgaggccctgtatagggcgcttaacattccgcacgacatcgctgcccgagcctcccgtttgactg +ccaccgtcgaactcgttgcaggtccagaccgcttggagtgccgcactgtgctcgggaataagactttccgga +cgacggtggttgatggcgcccatcttgaggcgaacggccc------------------------cgagcagt +acgttttgtcatttgacgcctctcgccagtctatgggggccgggccgcatagtctctcctacgagctcactc +ccgctggtctgcaggtcaagatttcatct-------aatggcctggattgcactgcaacattcccc---ccg +ggcggggcccctagcgctgctccaggggaggtagcagccttttgcagtgccctttacaggtacaacaggttc +actcagcgccattcgcttataggtggcttatggctgcatcctgaggggttattgggtatcttcccccctttc +tcacccgggcacctctgggagtccgctaaccctttttgtggggagggaaccttgtacacccggacatggtca +acatctggtttttctagtgacttttccccccctgaggcagccgtcgcagcgccggctgctactcc----ggg +gttatgcc---accctacgcctcctgttagtgatat-----------------ttgggtgtt---------- +---------accgccactt----tctgaagagt--------------tccaggttgacacagtgcccgctcc +tcctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcccgctcaaccatccagc +cccgctgggctaaag-------------------------------------gctcccgtgcgtaagtcacc +aacgccacc--------------------------------------atccccgcgtacccgccgcc----- +-------------------ttctttacacctatccggatggggcaaaggtgtacgcggggtcattgtttgag +tctggctgtgactggctggttaatgcatcgaatcccggccatcgtcccggcggcggcctttgccatgccttc +taccaacgctaccccgagtctt------tccacccaactgagttcattatgcgtgacgg---tcttgccgca +tatactctaactccccggcctattattcatgcagtggcccctgactatagggttgagcataacccaaagagg +cttgaggcagcataccgagagacttgttctcgccgtggtaccgccgcctacccgctccttggctcgggcata +taccaggtccccgtcagcctcagctttgacgcttgggagcgtaaccaccgtcccggggacgagctttaccta +accgacctcgccgctacc-------------------------------------------------tggtt +tgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------gccggccctcacaataactgaggatgcagc +cc------------gcacagccaacctagcactggagatcg------------atgctgctacggaggtcgg +ccgggcttgt---gccggctgtgttgttagtcctggggttgtgcactatcagtttactgctggggtcccagg +ttcggggaagtcgcgttctatacagcagggagatgttgatgtagtggttgttcccactcgggagctccggaa +tagttggcgtcgccgaggttttgcagcttttacacctcatacggcggctcgtgttaccacgggccgccgtgt +tgtgattgatgaggccccatctctcccaccgcatttgttgctactacacatgcagcgggcctcgtcggtcca +ccttctcggcgacccaaaccagatccctgctatagacttcgagcacgccggcctagtccctgcaatacgccc +tgagctcgcacccactagttggtggcatgttacccaccgctgccccgctgacgtgtgcgagcttatacgtgg +ggcttatcccaaaatccaaactactagccgcgtgttgcggtctttattctggaatgag------cctgccat +cggccagaagttagttttcacccaggctgctaaggctgccaaccccggtgcgattacagtccacgaggccca +gggcgccactttcacggaaactacaattatagccacagctgatgccagggggctcatccagtcttcccgagc +ccatgccatagttgcacttacccgccacacagagaagtgcgttattcttgacgcccccggcttgttacgtga +ggttggtatatcggatgtgattgtcaacaatttt------------------------------ttcctcgc +cggcg--gggaggtgggtcaccatcgcccctctgtgatacctcgtggtaatcctgaccagaatctcgcgac- +-----attacaggcctttccaccttcttgccagattagtgcctatcaccagttagctgaggaacttggccac +cgcccagctcccgtcgccgctgtcttgcccccttgccctgaacttgagcaaggcttattatatatgccacag +gagctttcggtgtctgatagcgtgctggtctttgaactcacggatatagtccactgccgaatggctgcccct +agccagcgaaaggccgtcctatcgacgcttgtgggtaggtacggccgtcggacgaagctgtatgaagcagcc +cactctgacgtccgtgagtccctggctagattcatccccaccattgggcccgttcaggctactacgtgtgag +ttgtatgagctggtcgaggccatggtggagaaaggtcaggatggctctgccgtgcttgagctcgacctctgc +aatcgtgatgtatcgcgtatcacatttttccagaaagattgtaataaatttaccacaggggagaccattgcc +cacggtaaggtcggccagggcatttcggcttggagtaagaccttctgcgccctgtttggcccatggtttcgc +gctattgaaaaagaaatattggctctgctcccccctaatatcttctatggcgacgcatacgaggagtctgtg +tttgccgccgctgtctcaggggcaggttcaagcatg---gtttttgagaatgatttttcagagtttgatagc +acccagaataacttctccct------------------tggcctcgagtgcgtagttatggaggaatgtggc +atgccccagtggctaatccggttgtaccatttggttcggtcggcctggatcttacaggcgccgaaggagtct +cttaagggattttggaagaagcattctggtgagcccggcaccctcctctggaacactgtttggaatatggcg +atcatagcacactgctatgaatttcgtgatcttaaggttgctgcttttaagggagatgactccgtggtcctc +tgtagtgactaccgtcagagccgcaatgcagcggccctgattgcaggttgtgggcttaaactgaaggttgat +tatcgccctattgggttgtatgctggtgtggtggtggcccctggtctggggacgctacccgatgtggtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggctgagcagttgcgcctagctgtt +tgtgattttcttcgagggttatcgaatgttgcgcaggtatgtgtcgatgttgtatcccgag-------tcta +tggagttagccctgggttggtacataacctcattggcatgttgcaaaccatagctgatggcaaagcccactt +tacagagactgttaaacctgtgcttgacctcacgaactctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgtgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtaccgcaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgtgatcaatccca----------- +------gcgcccctccgctgccccacgtcgtcgatctgcccca---------gctggggctgcgccgttgac +tgccatatcacctgctcccgatacatcccctgtacctgatgttgactctcgcggcgccatcttgcggcgcca +gtacaatttatccacatccccgcttacgtcatctgttgcttcgggtactaatctggttctttatgctgcccc +gctaaaccctttgctgccccttcaggatggcactaacactcacatcatggccactgaggcatccaattatgc +ccagtatcgagttgttcgagctacgattcgttacaggccattggtgccaaatgctgtcggcggctatgcaat +atccatctcattttggcctcagactactaccacccccacgtctgttgatatgaactctattacttccactga +tgttaggatcctagttcagcctggaattgcctctgagttggttatccctagcgagcgcctccattatcgtaa +ccagggctggcgctctgtggagacctcgggtgtggctgaggaggaggctacctctggtttggtaatgctctg +tatccatggttctcctgttaattcctatactaataccccctatactggggcgcttgggctccttgatttcgc +tttagagcttgagttcaggaacctgacacccgggaacaccaacacccgtgtgtcccggtatacaagcacagc +ccgtcatcggctgcgccgcggtgctgatggcaccgcggaacttaccaccacagcggccacgcgcttcatgaa +ggacttgcacttca---ccggtacgaat---ggggtcggtgaggtgggtcgcggtattgccctcacactctt +taatcttgctgacacgcttctcggcggtttgccgacagaattaatttcgtcggctgggggacagttattcta +ctcccgccccgtcgtctcagccaatggcgagccgactgtcaagttatatacatctgtagagaatgcgcagca +ggataaaggtatcgctatcccacatgacatagatctgggtgactcccgtgtggtcatccaggactatgacaa +ccagcatgagcaggatcgacccaccccctcgcccgccccttctcgccctttttccgttcttcgcgctaatga +tgttttatggctttc-----------------------------tcttactgccgccgagtatgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctcggatactgtcacatttgt---caacgtggct +acaggagcccaagccgtcgcccgctctcttgactggtctaaagttactctggacggccgccctcttactact +at-----ccagcagtactccaaaacattttatgttc-tcccgcttcgcgggaagttatctttttgggaggcc +gggacgactaag--gccggctacccctataattataacacaactgctagtgatcagattctgattgaaaatg +cggccggtcat------cgtgttgctat-ttccacgtataccaccagcttggg--------------cgctg +gtcctgtgtctgtttc-tgcagttggtgttctagctccacattcggcccttgcagtccttgaagacactatt +gatt---------accctgcccgtg----cccatactttcgatgacttttgcccagagtgtcgtgctc---t +tggtttgcaggggtgtgccttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattaa-tt----tc-cctt---t------gt +gccc-cct--------tc------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MW355404.1/17168/1-7168 |Hepeviridae isolate HESQL155, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +agcggctaactccgccttggcgaatgctgtggtggtccggccgttcttatcccgtgttcagactgatatcct +cattaatttgatgcaacctcggcagcttgtattccggcctgaagtcttctggaaccacccgattcagcgagt +catacataacgaattggagcagta---ctgccgggccc-gcgctggccgttgccttgaagtcggcgcccatc +cgagatccatcaatgacaaccctaatgtcttgcaccggtgctttcttcgcccggttggcagagacgtccagc +gctggtattccgcccccacccgtggcccggcggctaactgccgccgttctgcgcttcgtggcttaccccctg +ccgatcgcacatactgcttcgatgggttttctcgttgtgcttttgctgctgagaccgggattgctctatatt +cactgcatgacctctggccttcggacgttgcggaggccatggcccgccatggcatgacgcgcttgtatgctg +tcctacatttg-ccccctgaggtcttgttaccacctggcacttatcatacaacctcctatctcctgatccac +gatggcgaccgtgccgtcgtgacttatgaaggagacaccagtgcaggctacaaccacgatgtatctatactt +cgggcctggatccgcaccacaaaaatcgtcggtgaccacccactggtgatagagagggttcgtgccatcggc +tgccactttgttttgctcctcactgcagcccctgagccatcccctatgccttatgtcccttaccctcgttca +acagaggtgtatgtcaggtccatatttggccctggc---------gggtcaccgtcgctctttccatcagcc +t----------gctctactaaatcta-cattccatgccgttccggttcatatctgggaccgactcatgcttt +ttggcgccaccctagatgaccaggccttctgttgctcgcggcttatgacctatctccgcgggattagctata +aagttaccgttggcgcacttgttgccaacgagggttggaatgcctcggaggatgcactcaccgctgtgatta +cagcagcgtatctgacaatctgccatcagcgctacctccgaactcaggccatttctaaaggtatgcgccggc +tagaggtcgagcacgcccaaaaatttattacaaggctatatagttggctatttgagaaatc---------ag +gccgtgattatattcccggtcgccagcttcagttctacgcacagtgccgccgttggctctcggctgggttcc +atctggatcctagggtccttgtttttgatgaggcggtcccctgc---cgctgccggagcttcctgaagaa-- +----ggtcgccggcaaattctgttgctttatgaaatggctggggcagga------gtgcacctgttttctgg +----------------agccagcggaaggtctcattggcgactgtggc--------catgacaacgaggctt +acgagggatctgaggtggaccccgccgagcctgctcatcttgacgtttccgggacctatgcggttcatggcc +gtcagcttgaggctctatatagagcgttaaacattccacatgatatcgcggcccgcgcgtcacgtctgacgg +ctactgtggagcttgccgccagcccaggccgacttgagtgccgcacggtgctcgggaataagattttccgca +catcgataactgacggcgcccatctcgaagccaacggccc------------------------cgagcagt +acgtcctgacatttgacgactcccgccaagcaatgggggcaggatctcacagcctcacatacgaacttgtcc +ctgctggtctgcaggtcagaatatcttcc-------aatggcttggattgtactgcagtatttccc---cct +ggcggagcgccaagcgctccgccaggagaagtggcggctttttgcagtgctctatacaggtacaataggttc +acccagcgccattcgctgaccggcgggctgtggctgcatcctgaggggctccttggtttgttcccccctttc +tcccctgggcatctttgggagtctgcaaacccgttctgcggtgagagcacactttatactcgaacttggtct +acatccggcttttccagtgatttctcccctcccgaggcggctattgccgccataggccctgacat----ggg +gctgcccccgggcaccccctcttctgctagtgatgt-----------------ctgggtgct---------- +---------cccgccgccc----tctgagaggt--------------cggcgattgtctcgccacccgaaac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctagtaagcctgtcaatccgcctagt +cttgctacacccaag-------------------------------------cctcctgctcgtaagccgcc +tacgccacc--------------------------------------accggcccgcacccgccggc----- +-------------------tcctctacacttaccctgacggggctaaggtgtatgcaggctccttgtttgag +tcagattgtgactggttggttaacgcgtctaaccctggccaccgccctggtggtggcctttgccatgcattt +taccagcgcttcccagagtctt------tccacccgactgattttgtcatgcgtgaggg---tctcgctgca +tacactctgagcccgcgccctatcatccatgccgtggctcctgattatagggttgagcagaacccgaagagg +ttggaggcagcataccgtgagacttgttcccgcctcggtacagctgcctatccgttgctggggtcggggatc +tatcaggtccctgtaggtttgagttttgacgcctgggagcgtaaccaccgtccgggtgacgagctctacctc +accgagccagctgctgcc-------------------------------------------------tggtt +tgaagccaataagccaactca--------------------------------------------------- +------------------------------------------accggccctaacaattaccgaggacaccgc +cc------------gtacggctaacctcgcgcttgagattg------------actcagccaccgaggtcgg +tcgcgcttgc---accggttgtactgttagccctggggttgttcattaccagtttaccgccggggttcccgg +ctccgggaagtctagatccatacagcaaggggatgtcgatgttgtggtcgtgccaacccgtgagcttcgcaa +tagctggcggcgccgtggctttgctgctttcacaccccacactgcagctcgtgttactgctggccggcgtgt +cgtgatcgatgaagcgccctcgctcccaccgcacttactactgcttcatatgcaacgggcctcatcggtcca +ccttcttggtgatcctaaccagattcctgccatcgactttgagcacgccggtctggttccggcgatccgccc +tgagctcgcccctactagttggtggcatgtcacccatcgctgtcctgccgacgtgtgtgagctcatacgtgg +ggcctacccaaagatccagacgactagccgtgtgatgcgatctctgttttggaatgaa------cctgcagt +gggtcagaagttggtattcacgcaggcagccaaggcggctaaccccggtgcaattactgttcacgaggccca +gggtgccacgtttacagagactactatcatagctacggctgatgctagaggccttattcaatcttctcgcgc +acatgccatcgttgcgcttacccgccatacagaaaagtgtgtcatctttgacgctcctggcctattgcgtga +ggtcggtatttcggacattatcgttaacaacttt------------------------------ttcttggc +cggag--gtgaggtaggtcaccaccgcccttcaaccataccccgtggtaacccagaccgcaatttagacac- +-----cctgcaagcgtttcccccttcttgccagattagtgcctaccatcagttggccgaggagctgggccac +cggccggctccagtggctgccgttttgcccccttgtcctgagcttgagcaaggcctactctatatgccacag +gaactcacagtgtccgatagtgttttagtttttgagctcacggatatagttcactgccgtatggccgccccc +agtcaacgtaaggcggtcctctcgacgcttgtcggcagatacggccgtcggacaaagttgtatgaagtagcc +cattccgatgtccgtgagtccttagggagattcatccctactatcgggccagtccaagccaccacgtgcgag +ttatatgagttagttgaggccatggtggagaagggtcaggacggttccgctgtgcttgagctcgacctctgt +agccgcgatgtctcgcgtatcacatttttccagaaggactgtaataagtttacaacaggcgagactatcgcc +catggcaaggtgggccagggtatttcggcttggagcaaaaccttctgtgccttatttggcccgtggttccgt +gccattgagaaggagatcctggctctgctcccgcccaatatcttttatggcgatgcctatgatgagtcagtg +ttttctgcagccatctctggagcgggttccagtatg---gtcttcgagaatgatttttctgagttcgacagc +acccaaaataacttctctct------------------tggcctagaatgtgttattatggaggagtgtggc +atgccccagtggcttattcgactgtatcatctagtcagatcagcctggaccctgcaagccccgaaagagtct +ttgaaaggtttttggaagaagcattccggcgagcctggtactctcctttggaacactgtctggaacatggcg +atcatagcacattgctatgagttccgtgacctgagagtggcggcgtttaagggggatgattcagtggttctt +tgcagtgattaccgtcagagccgtaatgcggccaccctgatagccggctgtggattgaagctgaaggttgat +tatcgtcctataggtctgtatgctggtgttgtggtagctccgggcctcggggcactccctgatgttgtccgg +tttgccggccgactatctgagaagaactggggcccgggccctgaacgtgccgaacagttacgccaagcagtc +tgtgacttcctccgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------tcta +tggggttagtcccgggctggtacataaccttatcggcatgctgcagacgattgctgatggaaaggcccactt +tactgagaccgtcaagcctgtattggatctgacaaattctatcatacagaggttggaatgaataacatgtt- +c----------------tgtgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcagtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaacccgggactggagctcgctctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgctccccgtcgtcgatctacccca---------gctggggctgcgccgttaac +tgctgtttcaccggcgcctgatacagctccggtccctgatgttgactctcgtggtgctatcctgcgccgcca +gtataatctatctacctccccgctgacttcatctgtcgcctctggaactaatcttgtcctgtacgctgctcc +gcttaatcctctcctgccccttcaagacggtaccaatactcatatcatggcgactgaagcgtccaattatgc +tcagtaccgagttgtccgggctacaattcgctaccgccctttggtgccgaatgctgtcggtggttatgcaat +atctatttctttctggccccaaaccacaactacacctacctctgttgacatgaattctattacttctactga +tgttaggatactagtccagcctggcatagcctctgagttggttatcccgagtgagcgccttcactaccgcaa +ccagggctggcgctctgtcgagacctcgggtgtcgctgaggaggaggcgacatcaggtctggttatgctttg +tatccatggttcccctgttaactcttatactaacacaccctataccggggcattggggcttcttgattttgc +acttgagcttgagtttagaaatctgactcctgggaacactaacacccgtgtgtcccgctacaccagcacggc +ccgacatcgcctgcgccgtggtgccgatgggacggccgagctcacaactactgcagccacacggtttatgaa +ggacctacatttta---ccgggacgaat---ggtgttggcgaagtgggtcgtggtatagctctaacgttatt +caatcttgctgatacacttctcggcgggctgccgacagaattgatttcgtcggctggaggccagctatttta +ctcccgcccagtcgtctcagccaatggcgagccgactgtaaagttatacacctccgtcgagaatgcacagca +ggacaagggtattgctataccacacgatatagacttaggggactcccgtgtggttattcaggattatgataa +tcaacatgaacaggatcggcctaccccgtcaccggccccatcccgccccttttcggtcctccgagccaatga +tgtcttgtggctctc-----------------------------tttgactgcagctgaatatgat------ +cagaccacttatggctcgtcgactaaccccatgtatgtctcagataccgtcacatttgt---taatgtggcc +acgggtgcccaggctgttgcccgctctcttgactggtctaaggtcactttagatggtcggcctcttactacc +at-----ccagcagtactctaagacattctatgtgt-tgccgcttcgtggcaagctctctttttgggaggct +ggcactactaag--gccggctacccctataattataatacaactgccagtgaccagattttgattgagaatg +cagccggccac------cgtgtagctat-ctccacttacactactagtcttgg--------------tgctg +gtcctgtgtcagtttt-tgcggccggcgtactcgccccgcactccgctttagctgtgcttgaagacactact +gatt---------accctgcccgtg----cccatacttttgatgatttttgccctgagtgccgtaatc---t +cggcttacagggctgtgcctttcaatc--------tactgtcgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagtyttaattaa-tt-----c-c-c--ctt------gt +gccc-cct--------tc------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MT840360.1/17067/1-7067 |Hepeviridae strain 2018.AZ.6050.8.7 nonstructural polyprotein (ORF1) gene, complete cds +--------------------------------------------------------------ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccttggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagttggtttttcgacctgaagtgctctggaatcatcccatccaacgggt +tatccataatgaacttgaacagta---ttgtcgggccc-gggctggtcgttgtctagaggttggcgcccacc +caagatctattaatgataacccaaatgttttgcaccggtgctttctacgaccagttgggagagatgttcagc +gctggtactctgctcccacccgtggccctgcggctaactgccgccgttctgccttgcgcggcctcccccctg +ttgatcgtacctattgttttgatggattctcccgctgctcatttgccgcagaaactggggttgccctttatt +ctctgcatgacctctggccggccgatgttgcggaggctatggcccgacacgggatgacacgcttgtacgctg +cactacatctc-ccccctgaagtgctactaccacccggtacttaccatacaacttcataccttctgattcac +gacggtgatcgtgctgttgtgacctatgaaggtgatactagtgcaggctacaaccatgatgtctccatactt +cgtgcatggatccgcacaaccaagatagtcggcgaccatccgctggtgatagagcgtgtgcgggctattggc +tgccattttgtgctgctgcttaccgcagcccctgagccgtcgccaatgccttacgttccatacccccggtcg +acagaggtgtacgtccgctctatattcggtcctggc---------gggtccccatctctattcccatcggct +t----------gctctacgaaatcca-catttcatgctgtcccggtccatatatgggaccggctcatgcttt +ttggcgctactctggatgaccaggcgttttgctgttcacggcttatgacctatctccgtgggattagttaca +aggtcactgttggagcccttgtcgctaatgaggggtggaatgcttcggaggacgctcttaccgctgttatta +ctgcggcgtatttgaccatttgccatcagcgttacctccgtactcaagctatatccaagggtatgcgccgat +tggaggttgagcatgcccaaaaattcattacaagactttatagttggctgttcgagaagtc---------cg +gccgtgactatatccccggccgccagctccagttttatgcacagtgccgccgttggttatcggcgggtttcc +atcttgacccaagggtgcttgtttttgatgagtctgtaccctgc---cgttgtaggacattccttaagaa-- +----ggctgtgggtaagttctgctgttttatgaagtggttgggacagga------gtgtacctgctttttgg +----------------agccagcagagggtctagttggcgaccatggc--------cacgataatgaggcct +atgaaggctctgaggtcgatcaggccgagcccgcccatctcgacgtctctgggacttacgccgtccatggyc +gccaacttgaggccctgtatagggcgcttaacatcccgcatgatatygctgcccgggcctcccgtttgactg +ccaccgtcgaactcgttgcaggtccagaccgcttggagtgccgcactgtgctcgggaacaagactttccgga +cgacggtggttgatggcgcccatcttgaggcgaacggccc------------------------cgagcagt +acgttctttcgtttgacgcctctcgtcagtctatgggggccgggccgcatagtctctcctacgagctcactc +ctgctggtttgcaggttaagatttcatct-------aatggcttggattgcactgcaacattcccc---ccg +ggcggggctcctagcgcagctccaggggaggtagcagccttctgcagtgccctctacaggtacaacaggttc +actcagcgccattcgcttataggtggcctgtggctgcatcctgaggggctgttgggtattttcccccctttc +tctcccgggcatctctgggagtccgctaaccctttttgtggggagggaaccttgtacacccggacatggtca +acatctggtttttcaagtgacttctccccccccgaggcagccgttgcagcgccggctgctacccc----ggg +gccacgcc---accctgcaccccctgttagtgacat-----------------ttgggtgct---------- +---------accgccacct----tctgaagaat--------------ttcaggttgacacagcgcccgctcc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcccgctcaaccatccagc +cccgctgggccaaag-------------------------------------gcccccgtgcgtaagccgcc +aatgccacc--------------------------------------atccccgcgcacccgccgcc----- +-------------------ttctttacacctatccggatggagcgaaggtgtatgtggggtcactgtttgag +tctgactgtgattggctggtcaatgcgtcgaatcccggccatcgccccggaggtggcctttgtcatgccttc +taccaacgctaccccgagtctt------tccacccaactgagttcattatgcgcgacgg---ccttgccgcg +tatactttaactcctcggcctattattcatgcagtggctcctgactatagggttgagcataacccaaagagg +cttgaggcagcataccgggagacttgctctcgccgcggtactgccgcctacccactcctcggctcgggcata +twccaagtccccgttagcctcagcttcgacgcttgggagcgtaaccaccgccccggggatgagctctaccta +accgatctcgccgctacc-------------------------------------------------tggtt +cgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------gccggcccttacaataactgaggatgcagc +cc------------gtacagccaatctagcactggagatcg------------atgctgccacggaggttgg +ccgggcttgt---gccggctgcgcagttagccctggggttgtgcactatcagtttactgctggggtcccagg +ttcggggaagtcgcgttctatacagcagggggatgttgacgtagtggttgttcccactcgggagctccggaa +cagttggcgtcgccggggttttgcggcttttacacctcacacggcagcccgtgttaccacgggccgtcgtgt +tgtgattgatgaggccccatccctcccaccgcatttgttgctgctacatatgcagcgggcctcgtcggtcca +ccttctcggcgacccaaaccagatccctgccatagatttcgagcatgctggcctggtccccgcaatacgccc +tgagcttgcgcccaccagttggtggcatgtcacccatcgatgccccgctgacgtgtgcgagcttatacgcgg +ggcttatcctaaaattcaaaccactagccgcgtgttgcggtctctattctggaatgag------cctgccat +cggccagaagttagttttcacccaggccgctaaggctgccaatcccggtgcgattacagtccacgaggctca +gggcgccactttcacggaaactacaattatagccacggctgatgctagggggctcatccaatcttcccgagc +ccatgctatagtcgcactcacccgccacacagagaagtgcgttattcttgatgcccccggcttgttacgtga +ggtcggtatatcggatgtgattgtcaacaatttc------------------------------ttcctcgc +cggcg--gggaggtgggtcaccatcgcccctctgtgatacctcgcggcaatcctgaccagaacctcgcgac- +-----actacaggcctttccaccctcctgccagattagtgcctatcaccagctagctgaggaacttggccac +cgcccagctcctgtcgccgctgtcttgcccccttgccctgaacttgagcagggcctgttatatatgcctcag +gagcttacggtatctgatagcgtgctggtctttgaactcacggacatagtccattgccggatggccgccccc +agccagcggaaggccgttctatcaacgctcgtgggtaggtacggccgtcggacgaagctgtatgaagcagct +cactctgacgtccgtgagtctctggctagatttatccccaccattgggcccgttcaggctactacgtgtgag +ttatatgagttggtygaggccatggtggagaaaggtcaggatggctctgccgtgcttgagctcgacctctgc +aatcgtgatgtatcgcgcatcacatttttccagaaagattgcaacaaattcaccacaggggagaccattgcc +catggtaaggtcggccagggcatctcggcttggagtaagaccttctgtgccctgtttggtccgtggtttcgt +gctattgagaaagaaatattagccctgctcccgcctaatattttctacggtgacgcatacgaggagtctgtg +tttgccgccgctgtgtcaggggctggttcgagcatg---gtatttgagaatgatttttcagagtttgatagc +acccaaaataacttctccct------------------tggcctcgagtgtgtagtcatggaggaatgcggc +atgccccagtggctaatccggttgtaccatttggttcggtcggcctggatcctacaggcgccgaaggagtct +cttaagggattttggaagaagcattctggtgagcccggcaccctcctctggaacaccgtttggaatatggcg +atcatagcacattgctatgaatttcgtgattttagggttgccgcttttaagggagatgattccgtggtcctc +tgtagygactaccgtcagagccgtaatgcagcggccctgattgcaggctgcgggctcaaactgaaggttgat +tatcgccccattgggttgtatgctggtgtggtggtggcccctggcctggggacgctacccgatgtggtgcgt +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggctgagcagttgcgcttagctgtt +tgtgattttcttcgagggttaacgaatgttgcgcaggtatgtgtcgatgttgtatcccgag-------ttta +cggggttagccctgggctggtacataaccttattggcatgctgcagaccatagctgatggcaaagcccattt +tacagagactgttaaacctgttcttgacctcacgaactctattatacagcgggtggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctattct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatatccat---- +--------------ccaaccaacccctttgccgccgatgtcgtaccgcaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgtgatcagtccca----------- +------gcgcccctccgctgtcccacgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgctatatcacctgctcccgatacagctcctgtacctgatgttgactcgcgtggcgctatactgcgacgcca +gtacaatttatccacatccccgctcacatcatctgttgcttcgggtactaatttggttctttatgctgcccc +gctaaaccctttgctgccccttcaggatggcactaacactcacatcatggccactgaggcatctaactatgc +ccagtatcgggttgtccgagctacgattcgttacaggccattggtgccaaatgctgtcggcggctatgcaat +atccatctcattctggcctcagactactaccacccccacrtctgtcgatatgaactctatcacttccactga +tgttaggattcttgttcagcccggtattgcctcggagttggttatccctagtgagcgcctccattatcgtaa +ccagggttggcgctctgtggagacctcgggtgtggctgaagaggaggctacttctggtttggtaatgctttg +tatccatgggtctcctgttaattcctacaccaataccccctataccggggcgcttggactccttgattttgc +tttagagcttgagtttaggaacctgacacccggaaacactaacacccgtgtgtcccggtatacgagtacagc +ccgtcatcggctgcgccgcggtgctgatggcaccgccgaacttaccaccacagcggccacgcgcttcatgaa +ggacctgcacttca---ccggtacgaat---ggggtcggtgaggtgggtcgcggtattgctctcacactctt +taatcttgctgatacgcttcttggtggtttgccgacagaattaatttcgtcggctggggggcagttattcta +ctcccgccctgtcgtctcagccaatggcgagccgactgtcaagttatatacatctgtagagaatgcgcagca +ggataaggggatcgctattccacatgacatagatctaggtgactctcgtgtggtcatccaagactatgacaa +ccagcatgagcaggaccgacctaccccctcgcctgccccttctcgccccttttcggttcttcgcgctaatga +tgttctatggctttc-----------------------------tctcactgccgccgagtacgac------ +cagactacatatgggtcgtccactaacccgatgtatgtctcggatactgtcacatttgt---caatgtggct +acaggagcccaggccgtcgcccgttccctcgactggtctaaagttactctggacggccgccctcttactact +at-----ccagcagtactccaaaacattttatgttc-tcccgcttcgcgggaagttatccttttgggaggcc +gggacgactaag--gccggctacccctataattacaacacgactgctagtgatcagattctgatcgaaaatg +ctgctggccat------cgtgttgctat-ttccacttataccaccagcttggg--------------cgccg +gccctgtgtctgtttc-tgcagtcggtgttttagccccacattcggcccttgcagtccttgaagacactatt +gatt---------accctgcccgtg----cccacacttttgatgatttttgcccggagtgccgcgctc---t +tggtttgcagggg----------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MT840366.1/17087/1-7087 |Hepeviridae strain 2019.AZ.6234.1.1 nonstructural polyprotein (ORF1) and capsid protein (ORF2) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +--------------------------------------------------cccgtgtgcaaactgagattct +tattaatttgatgcaacctcgacagctggttttccgacctgaagtgctctggaatcatccaattcaacgggt +tattcataatgaattagaacagta---ctgtcgggccc-gggctggtcgctgcctagaagttggggcccatc +caagatccatcaatgataacccgaatgttttgcaccggtgctttctccgaccagttgggagggacgtccagc +gctggtactctgcccccactcgtggccctgcggctaactgccgccgctctgccctgcgtggccttccccctg +ttgatcgtacctactgttttgacgggttctcccgctgctcatttgctgcagaaactggggtggccctctact +ctctgcatgacctctggccggccgatgttgcggaggccatggcccggcacgggatgacacgcttatacgctg +cactacacctc-ccccccgaagtactattaccgccaggtacctaccatacaacttcataccttttgattcat +gacggcaatcgtgctgttgtgacctatgaaggtgacactagtgcaggttacaaccatgatgtttctatactc +cgcgcatggatccgcacgactaagatagttggcgaccatccgctggtgatagagcgtgtgagggctatcggc +tgccattttgtgctgctgcttactgcagcccctgagccgtcaccgatgccttatgttccatacccccggtcg +acggaggtgtatgtccgctccatattcggccctggc---------gggtccccgtcgcttttcccatcagct +t----------gctccacaaaatcta-catttcatgctgtcccagttcacatttgggaccggcttatgctct +ttggtgccaccctggatgaccaggcgttttgctgttctcggcttatgacctaccttcgtgggattagttaca +aggtcactgtcggtgccctcgttgctaacgaggggtggaatgcttcggaggacgcccttaccgctgttatta +ctgcggcgtatttgaccatttgtcatcagcgctacctccgtactcaggctatatctaagggcatgcgccgac +ttgaggttgagcatgctcaaaaattcatcacaagactctacagttggctgtttgagaagtc---------tg +gccgtgactacatccctggtcgtcagctccagttctatgcacagtgccgccgctggttatcggcaggcttcc +accttgatccaagggtgcttgtttttgatgagtctgtgccctgc---cgttgcaggacgtttcttaagaa-- +----ggttgcaggtaaattctgttgttttatgaagtggctgggacagga------gtgcacctgctttctgg +----------------aaccagcggagggcctggttggcgaccacggc--------cacgataatgaagcct +atgagggctctgaggtcgaccaggctgagcccgcccacccggatgtttctgggacttatgccgtccatgggc +gccaactcgaggccttgtataaggcgcttaacatcccgcatgatattgcagctcgagcctcccgtctaaccg +ccactgttgagctcgttgcaagcccagaccgcttggagtgtcgtaccgtgatcgggaataagaccttccgaa +caacggtggttgatggcgcccatcttgaggcgaacggccc------------------------cgagcagt +acgtcctttcgttcgacgcctcccgccaggctatgggggccgggtcacatagcctcacctatgagctcaccc +ctgctggtctgcaggttaggatttcatct-------aatggcctggattgcgccgcggtattcccc---ccg +ggcggagcccctagcgccgccccgggggaggtagcagccttttgcagtgccctctacaggtacaataggttc +acccagcggcattcgcttacgggcggcttgtggttgcatcctgaggggttattgggtattttcccccccttt +tcccccgggcatctttgggagtccgccaatcctttttgcggggaggggaccttgtacacccgaacttggtca +acatctggtttttctagtgatttttcccccccagaagcagctgccgctgcgccggctgctgttcc----ggg +gttacccc---atcctacaccccctgttagtgatat-----------------ctgggtgtt---------- +---------gccgccaccc----tccgaagaac--------------ttcaggttgatgcagtgcctgcccc +tcctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tccccgagcctgctctatcgcccagc +cccgttgagccaggg-------------------------------------gtccccgtgcgtaagccggc +ggcatcacc--------------------------------------acctccgcgcacccgccgac----- +-------------------ttctttacacttatccagacggggcaaaggtgtacgcggggtcattgtttgag +tctgactgtgactggttggttaatgcgtcgaaccctggccaccgtcccggaggaggcctttgccatgccttc +taccaacgttaccccgagtcct------tccatccaactgagtttattatgcgcgacgg---tcttgccgcg +tatactttaactccccggcctattatccatgcggtggcccctgattatcgggttgagcagaacccaaagagg +cttgaggcagcatatcgagagacttgttctcgtcgtggcaccgccgcttatccactcctcggttcgggcata +taccaagtcccggttagccttagctttgacgcttgggagcgtaaccatcgccccggggacgagctttacctg +actgacctcgccgctgct-------------------------------------------------tggtt +tgacgccaacaagccagcaca--------------------------------------------------- +------------------------------------------gccggccctcacaataactgaggatacagc +cc------------gtacggccaacctagcactggagatcg------------acgctgctactgaggttgg +tcgggcttgt---gccggctgtacgattagtcctgggatcataaactatcaatttaccgccggggtaccagg +ttcggggaagtcgcggtctatacagcagggggatgtcgatgtggtggttgttcccactcgagagctccggaa +cagttggcgccgccggggttttgcagcgtttacacctcacacggcggcccgtgtcaccaagggtcgtcgtgt +tgtgattgatgaggccccatctctcccaccgcatttgctgctattacacatgcagcgggcctcgtcggtcca +tcttcttggcgacccgaaccagattcctgctatagacttcgagcatgccggcctggttcccgcaatacgccc +cgagctcgcgcctaccagctggtggcatgttacccaccgctgccccgccgatgtgtgtgagctcatacgcgg +ggcctaccccaaaatccagaccactagccacgtgttgcgatctttattctggaatgag------cccgctat +tggccagaagttagtctttacgcaggccgctaaggctgccaaccctggtgcgattacagtccatgaggccca +gggtgccacctttacggagaccacaatcatagccacggctgatgctagggggctcattcaatcttcccgggc +ccacgctatagtcgcactcacccgccacacagagaagtgcgttattcttgatgcccccggtttgctacgtga +agttggtatttcggatataattgttaacaatttt------------------------------ttcctcgc +tggtg--gagaagttggccaccaccgcccctccgtgataccccgtggtaaccctgatcagaaccttgctat- +-----actacaggcctttccgccttcctgtcagataagtgcttaccatcagttagctgaagaactaggccac +cgcccagcccccgtagctgccgtcttgcccccttgccctgagcttgagcagggcctgctgtatatgccgcaa +gaactaacggtgtctgatagcgtgttggtctttgaactcacggacatagtccactgccggatggccgcccct +agccagcggaaggccatcctatcgacgcttgtgggtaggtacggccgtaggacgaagctgtacgaagcagct +cattctgacgtccgtgagtccctcgcgagattcattcccactatcgggcccgttcaggctaccacgtgtgag +ctatacgagctggttgaggccatggtggagaagggtcaggatggttccgctgtgcttgaactcgacctttgc +aaccgtgacgtatctcgtatcacattcttccagaaagattgtaacaagtttaccacaggggagaccattgcc +cacggtaaggtcggtcagggcatttcggcttggagtaagaccttttgtgccctgtttggcccgtggtttcgt +gctattgaaaaagaaatactagccctgctcccgcccaatatcttctacggcgatgcgtatgaggagtctgtg +tttgctgccgctgtgtccggggcgggctcatccatg---gtatttgagaacgatttttcagagtttgatagc +actcaaaataacttttccct------------------tggtctcgagtgtgtagtcatggaggaatgcggt +atgccccagtggctaattcggctgtaccatttggttcggtcggcctggatcctacaggcgccgaaggagtct +ctcaagggattctggaagaagcattctggtgagcccggcaccctcctttggaataccgtttggaatatggcg +attatagcacactgctatgaattccgtgattttagggtcgccgccttcaaaggggatgattcggtggttctc +tgcagtgactaccgtcaaagccgcaacgcagcggctcttattgcaggctgcgggctcaagctgaaggttgat +taccgccctatcgggttgtatgctggtgtggtggtggcccctggtctggggacgctacctgatgtagtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggctgagcagttgcgccttgctgtt +tgtgactttcttcgagggttgacgaatgttgcgcaggtatgtgttgatgttgtatcccgag-------ttta +tggagttagccctggactggtacataacctcattggcatgctgcaaaccattgctgatggcaaggctcactt +tatagagactgttaaacctgtgcttgacctcactaattctattatacagcgggtggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcctcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgtcgccgatgtcgtttcgcaacccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccacgtcgtcgatctgcccca---------gctggggctgcgccgttgac +cgctacatcacctgcccctgacaccgcccctgtacctgatgttgattcgcgcggcgctatattgcgacgcca +gtataatctgtctacatccccactcacgtcatctgttgcctcgggtactaatctggttctttatgctgcccc +gctaaaccctctgttgcccctgcaggatggcactaatacccatattatggccactgaagcatctaattatgc +ccagtatcgggttgttcgagccacgatccgttataggccattggtgccgaatgctgttggtggctatgcaat +atccgtttcattctggcctcagactactaccacccccacgtctgttgatatgaactctataacctctactga +tgttaggattctagtccagcccggtgttgcctctgagttagttatccctagtgagcgcctccattatcgtaa +ccagggctggcgttctgtggagacctcgggtgtggccgaggaggaggctacttccggcttggtaatgctctg +tatccatggctctcctgttaactcttacaccaataccccttataccggggctcttggacttcttgattttgc +tttagagcttgagtttaggaacttgacacccgggaacaccaacacccgagtttcccggtacacaagcacagc +ccgtcatcggctgcgccgcggtgctgatggcaccgccgagcttaccaccacagcggctacacgtttcatgaa +ggacctgtacttca---ccggcacgaac---ggggtcggtgaggtgggccgtggtattgctctcacactctt +taatcttgctgacacgcttctcggtggtctgccgacagaattaatttcgtcggctgggggacagttgttcta +ctcccgccccgtcgtctcagccaatggcgagccgactgttaagttatatacatctgtagagaatgcgcagca +ggataaagggattgccatcccacatgacatagacctgggtgactcccgtgtggtcatccaggactatgataa +ccagcatgagcaggatcggcccaccccttcgcctgccccatctcgcccgttctcggttcttcgtgccaatga +tgttttatggctctc-----------------------------tctcaccgctgctgagtatgac------ +cagactacctatgggtcgtccaccaacccgatgtatgtttctgataccgtcacatttgt---caacgtggct +actggagcccaggctgttgcccgctccctcgactggtctaaagttactctggatggccgtccccttactacc +at-----ccagcaatactcaaaaacattttatgtcc-tcccgcttcgcgggaagttgtccttttgggaggcc +gggacaactaag--gctggttacccctataattataatacaactgctagtgaccagattttgattgaaaatg +cggctggtcac------cgtgttgctat-ttccacctataccaccagcctggg--------------cgctg +gccctgtctcagtttc-tgcagtcggtgtactagccccacattcggctcctgcagttctcgaggatactacc +gact---------accctgcccgcg----ctcatacttttgatgatttctgcccggagtgtcgcgccc---t +tggtctgcaggggtgtgccttccagtc--------tactatcgctgaacttcagcgtct------------- +--------caaaatgaaggtaggtaaaacccgggagttttaattaa-tt----t--cctt---t------gt +gccc-cct--------tc-atag-cttc-----gt-tt---t----------------attt-c-------t +tttcttct----gc----------------tgtccgcgctccctg---------------------gaaaaa +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MT840367.1/17190/1-7190 |Hepeviridae strain 2019.AZ.6360.1.2 nonstructural polyprotein (ORF1) and capsid protein (ORF2) genes, complete cds +-----------------------------ctgacca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggctaactccgccttggcgaatgctgtggtggtccggccgttcttgtcccgcactcagactgacatcct +tattaatctgatgcaaccccggcagctcgtattccgccctgaagttttgtggaatcatccgatccagcgagt +catacataacgaactggagcaata---ctgccgtgctc-gcgccggtcgctgtctggaagtgggggcccatc +caagatctattaatgacaaccctaatgttttgcaccggtgcttccttcgtccggtcgggagagatgtgcagc +gttggtattccgccccgacccgcggcccagcggctaattgccgccgttctgcactacgcggcctaccccctg +tcgaccgtacctactgttttgacgggttctcccgctgtgccttcgctgctgagactggaatcgccttatact +cactacatgacctttggcctgctgacgtcgcagaagctatggcccgccacgggatgacacgtttgtatgcag +cccttcactta-ccccctgaggttttgttaccacctggtacttatcataccacctcttatttgttgattcac +gacggcgatcgcgctgtcgtgacttacgagggggacactagtgcaggctataaccatgatgtgtccattctc +cgcgcatggattcgcacaactaagatagtcggtgatcacccgctggtcatagagagggtccgtgctatcggc +tgccaytttgtgctgctcctcactgccgcccctgaaccatctcccatgccttatgtcccataccctcgctca +acagaggtgtatgtcaggtctatatttggccccggc---------gggtcgccttctctcttcccatcagcc +t----------gctccaccaaatcta-catttcatgcggtcccggttcatatttgggaccggctcatgctct +tcggcgccaccctagacgaccaagccttctgttgctcgcggcttatgacctatctccgcgggatcagttata +aggtgaccgttggcgcgcttgtcgccaacgaaggctggaatgcctcggaggatgcgctcactgctgtgatca +ctgcagcgtacttgactatctgccatcaacgctacctccggacccaggccatatctaagggcatgcgccggc +tagaggtcgagcacgcccagaagtttattactaggctttatagttggttgttcgagaagtc---------cg +gccgtgattatatccccggccgccaactccagttttatgcacagtgccgccgctggctctccgccggctttc +atttagaccctagggtccttgtttttgatgaagcggttccctgc---cgttgtaggagctttttgaagaa-- +----agtcgctggtaagttctgttgctttatgaagtggttagggcagga------gtgcacttgttttctgg +----------------agccggctgaaggcctgattggtgactgtggc--------cacgataatgaagcct +atgagggctccgaggtagatcccgccgagcctgcccaccttgatgtctcygggacctacgcagttcatggcc +gccagcttgaggctctatatcgggcgctcaatatcccgcacgatatcgcggcccgtgcaacacgtctgacgg +ccaccgtggagctcactgctagtccaggccacctcgaatgccgtacggtgcttggaaataagaccttccgca +catcaataactgatggcgcccaccttgaggttaatggccc------------------------tgagcagt +atgtcttgacatttgacgactcccgccaggcgatgggggctggacctcatagtcttacatatgaactcaccc +ctgctggcctgcaggttaaaatatcttct-------aatggcttggactgcgtcgccgttttcccc---cct +ggtggagcgccaagtgccccaccgggtgaggttgcagctttctgcagtgccttgtacagatacaacagattt +acccagcgtcattcgctaactggtgggttgtggctgcatcctgaggggctcttgggcttgttccctcctttc +tcccctgggcatgtttgggagtccgcaaaccccttctgcggtgagggcacactttacacccggacctggtca +acatctggtttctcaagtgatttctccccccctgaggcggctttcgccgcaccagctcctgatgg----tgg +gttgcctctcggtaccccctccactgttagtgatgt-----------------ttgggtgct---------- +---------cccgtcgccc----tctgaggggt--------------cagtagttgccccaccacctgcagc +ctcggc------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------------------------tagtaagcctactagcccgcccagc +cctgccatatctaaa-------------------------------------ccccccgtttgtaagccgtc +cccaccgcc--------------------------------------gccggctcgtacccgccggc----- +-------------------tcctctatacttatccggatggggctaaggtctatgcgggctccctttttgag +tcagactgtgactggctggttaacgcatctaaccctggtcaccgccctggtggcggcctctgccacgccttc +taccagcgcttcccagagtcgt------tccatccgactgattttatcatgcgcgacgg---cctcgctgct +tacaccttgaccccgcgtccgatcattcatgctgtggcccctgactacagggttgagcagaaccccaagagg +ctggaggcagcgtaccgtgagacttgttcccgcctcggtactgccgcatacccactgctggggtctgggatt +tatcaagttcctgtgggtttaagttttgatgcctgggagcgtaatcatcgcccaggtgacgagctctacctc +accgagcctgccgccgcg-------------------------------------------------tggtt +tgaggctaacaaaccaaccca--------------------------------------------------- +------------------------------------------acctgccttaacgattactgaggacactgc +cc------------gcacggccaacctcgcgctcgagatcg------------attctgctactgaggtggg +tcgtgcctgt---actggttgcactattagccctgggattgttcattaccagttcactgccggggtacctgg +ttccgggaagtctaggtccatacaacaaggggacgttgatgtcgtggtcgtaccaacccgcgagctccgcaa +tagctggcggcgccgtggttttgcagcttttacgccccatacggcggcccgtgtcacaaccggccgacgtgt +tgtgattgatgaggcgccctctctcccaccacacttgctattgcttcacatgcagcgagcttcgtcggtcca +tcttctcggcgaccccaaccagatccccgccattgatttcgagcatgcaggcctggtcccggcgattcgccc +tgagcttgccccaactagttggtggcatgttacacatcgttgccctgccgacgtgtgcgagctcatacgcgg +ggcttatcctaagattcaaaccaccagccgtgtgatgcgttctttgttttggaatgag------cccgcggt +cggccagaagttggtcttcacgcaggcagctaaggcagccaaccccggcgcaattactgtccatgaggctca +gggcgccacttttactgagactaccattatagccacggccgatgccaggggcctcattcagtcctctcgtgc +gcatgcaatagtcgcgcttacccgtcacacagaaaaatgtgtcattttggacgcccccggcttactgcgtga +ggttggtatctctgatgtaattgtcaataatttc------------------------------tttctggc +cggtg--gtgaggttggccaccatcgcccctccattataccccgaggtaacccagaccagaatttagatac- +-----cttgcaggcattccctccatcttgtcaaattagtgcctaccatcagctagctgaggagttgggccac +cgacccgccccggtggctgctgtgttaccgccctgtcctgagcttgagcagggtctactctatatgccacaa +gaacttacagtgtccgatagtgtcttggtttttgagcttacggacatagttcactgccgaatggcagcccct +agccagcggaaggccgtcctttcaacacttgtcggcaggtatggccgccgaacgaagctgtacgaggcggcc +cattcagatgtccgtgagtccttaggaagatttatccccactatcggaccaattcaggccactacatgtgag +ttatatgagatggtggaagccatggttgagaagggtcaggacggttctgctgtgttagagcttgatctctgt +agccgagatgtttcgcgcattacattcttccagaaggactgtaataaatttacaacaggcgaaactattgcc +catggcaaggtgggccagggtatctcggcatggagtaagaccttttgtgctctatttggaccgtggttccgt +gccattgagaaagagatcctggctctgctcccgcccaatattttctacggtgacgccttcgaagagtcagtg +ttttctgcagmtatctctggggcgggcactagtatg---gtctttgagaatgatttctccgagtttgacagc +acccaaaataacttctccct------------------cggccttgagtgtgtcatcatggaagagtgtggt +atgcctcagtggcttatccggctgtaccatttggtgaggtcagcctggacattgcaggccccgaaagagtcc +ctgaaaggtttttggaagaagcactctggcgagcctggtacactactttggaacaccgtctggaacatggcg +atcatagcacactgctatgaattccgcgacttgagagtggcagcgttcaagggagatgattcagtggtcctt +tgtagtgactatcgccagagccgtaacgcggctgctctgattgctggttgtggtttaaaattgaaggttgac +taccgccccattggattgtacgccggcgtcgtggtggcccctggtctcggggcgctccccgacgttgtcagg +tttgccggccggttatccgaaaagaattggggccctggtcccgagcgcgctgaacagctacgcttagcggtt +tgtgatttcctccgaaggttgacgaacgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tgaggttagtcctgggctggtacataaccttattggcatgctacagactattgctgatgggaaggctcattt +cactgagactgtcaagcctgtacttgaccttacaaactctatcatacagaggttggaatgaataacatgtt- +g----------------tgtgcattgcccatggg------------atcgccatgcgccctcgggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccacgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtatcacaacccggggttggagctcgccctc +gacagccgccccg---------------cccccttggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgccgccccccgccgtcgatctacccca---------gctggggctgcgccgttaac +tgctgtttctcctgcgcccgatacggccccggtccccgacgttgattcccgcggtgctatcctgcgccgcca +gtacaacctgtctacttctcccttgacctcctctgttgcttctggcactaatcttgttttatatgctgcccc +gcttaaccctcttttacctctccaggatggcaccaatactcacatcatggcgactgaggcgtccaattacgc +ccagtatcgggttgtccgggccacaatccgctaccgccctttggtgccgaatgctgttggtggctacgcaat +ttctatttctttttggcctcagaccacaactactcccacctctgttgacatgaattctattacctctactga +tgttaggattttggtccaacccggtatagcctctgagttggttatcccgagtgagcgcctccactatcgtaa +tcagggttggcgctccgttgagacctcgggtgtggccgaggaggaggcgacatcgggtctggttatgctttg +tattcatggttcccctgttaattcttacaccaatacgccctatactggggcattgggccttcttgattttgc +acttgagcttgagtttaggaatttaacccccgggaacactaacacccgtgtatcccggtatactagcacggc +ccgtcaccgtttgcgccgtggcgccgacggaactgctgagctcacgaccactgcagccacgcgcttcatgaa +ggacctgcacttca---ctgggacgaat---ggcgttggtgaagttggccgcggcatagccttaaccttgtt +taaccttgctgatacacttcttggcggtctgccgacagaattgatttcgtcggctggaggtcagctcttcta +ctcccgcccagttgtctcggccaatggcgagccgactgtcaaattatacacttccgtcgagaatgcacagca +ggacaagggtattgctatacctcatgatatagatctaggggactcccgcgtggttatccaggactacgataa +ccagcatgagcaggataggcctaccccttcgccggctccgtctcgccccttttcagtcctccgtgccaatga +tgttttgtggctctc-----------------------------tcttaccgctgctgagtatgac------ +caaactacttatggctcatcgaccaaccctatgtatgtctcagacactgtcacttttgt---caatgtggct +acaggagcccaggctgtcgctcgctcccttgattggtctaaggtcaccttggatggtcgacctcttaccacc +ay-----ccagcagtattctaagacattttatgtgc-tcccacttcgcggtaagctttctttttgggaggct +ggcactactaag--gctgggtacccctacaactataacaccactgctagtgaccagattttgatagagaatg +cagccggccac------cgtgttgctat-atctacttatactaccagtcttgg--------------tgctg +gtccagtgtctgtttc-tgcggttggcgtccttgccccacactctgctctcgctattcttgaagataccatc +gatt---------accctgcccgcg----ctcatacttttgacgatttctgccctgaatgccgtaatc---t +tggcctgcagggctgtgctttccaatc--------tactattgctgaacttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagttttaattaa-ttt---ta-ccct----------gt +gccc-cct--------tc-tagg-ct-tt----gc------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MT364355.1/17308/1-7308 |Hepeviridae strain CHNBJr4, complete genome +---------------------------ggcagacca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcatcacaaccgccatcgag---caagctgctctggc +tgcggccaattctgccttggcgaatgctgtggttattcggccgtttttgtcccgaacacagacagatattct +tattaaccttatgcagccccggcaattggtttttcgcccggaggttttttggaatcatcctatccaacgtgt +tatacataatgagctagagcagta---ttgtcgggccc-gtgcggggcgttgtcttgaggtcggagctcacc +cgagatctatcaatgacaatccgaatattttgcaccggtgcttcctccggcctgttggtagagacgtccagc +ggtggtattctgcccctacccgtggccctgctgctaattgccgccgctctgcgttgcgcggcctccctcctg +ctgaccgtacttactgctttgacgggttctctagctgcatgtttgcagctgagaccggtattgctctttact +ccttacatgacctgtggcctgctgacgttgcggaggcaatggcgcatcacgggatgtcacgcctgtatgctg +tactgcacctc-cctcctgaggttttgctgccacctggcacttaccacaccacctcctatcttttgatccat +gacggtagccgtgccgtcgtaacttatgaaggtgacactagtgctggttataaccatgatgtctccattctc +cgcgcttggatccgcacgacaaaaatcatcggtgaacacccgctggtgatagagcgtgtccgcgcgattggc +tgtcactttgtgttgttgctcactgccgctcctgaaccatcgcccatgccctatgtccctttcccccgctct +acagaggtgtttgttcgctcaatattcggtccaggc---------ggctcgccctccctcttcccgtcagca +t----------gttgtactaagtcca-ctttctacgccgtccctgttcatatttgggataggctcatgctct +ttggcgccacgctggacgaccaggccttctgctgctcgcggcttatgacttaccttcgggggatcagctata +aagtcactgtaggcaccctcgtcgctaacgagggctggaacgcctctgaggatgccctcactgcagtaatta +ctgcggcgtatctcaccatctgccaccagcgttatctccgcacccaagcgatctctaaaggtatgcgccggc +tggaggtcgagcacgcccagaagtttgttaccagactctatagctggctgtttgagaagtc---------cg +gccgtaactatatccctggccgccagctccagttctacgcgcagtgccggcgctggctttctgctggttttc +acttggaccctcgagtgcttgtcttcgacgagtctgtgcactgc---cgttgtagaagtctggtaaggag-- +----tgtggcaaggaaggtctgctgttttatgaagtggctcggtcagga------gtgcaactgctttttgg +----------------agcctgcagagggcctgcttggcgaccaaggc--------cacgacaacgaggcct +acgaggggtctgaggttgaccccgccgagcccgcccctaccgatgtgtcgggcacctacactgttcatgggc +gatcgttagtggacctatataaagcactcaacgtcccgcaagagatagcagcccgggctgcccgtttgtcgg +ctactgtcgagcttgtcgctggcccggggcggcttgagtgccgtacgatcttgggcaacaagaccttccgca +ccatgttcactgacggcgcccaactggaggcaaatggccc------------------------agagcagt +atgttctttcatttgatgaagaccgccagtgtatgggtgccgggccgcatagtcttgtgtatgagcttacct +ccagcggtctgcaggttaaaattacatct-------aatggcttagactgcactgcactcttccca---cct +gggagggccccgagtgttgaggctgcagaggttacggccttctgcagcgccctgtacagatataacagaacc +acccaacgacactcgattgttggcgggctatggttacacccggagggattgctaggtctcttcccgcccttc +tccccaggccacttttgggagtccacgaacccattttgcggtgaaggaaccctttacaccagaacttggtct +gagtctggcttctccagtgatttcctaccacctgaggcagccgcttgtgcccatcccaccgctgac------ +-cagccccatataccggccccatctgaggctgacgt-----------------tcgaggccc---------- +---------gttatccccc---------------------------------------------ctcgtgac +tcccg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------------gggctgtcggcccgcccg-- +-tcggcacccccggg-------------------------------------ccctctgctcttaagccacc +cgggccacc--------------------------------------ttcagcccgtaaccgtcgcc----- +-------------------tcctttacacctatccagatggcgccaagatatactcagggtccttgtttgag +tcagactgcgattggctggttaacgcatctaaccccggccaccgtccaggcggtggcctctgtcatgccttt +taccagcgtttcccacagtctt------ttgaccatactaaatttatcatgcgggacgg---gttagccgca +tacaccttgacacctcgccccatcattcatgcggttgcccccgattatagagtagcaaacaaccccaaaaga +ttggaagcagcgtaccgtgagacttgttctcgactcggtactgccgcctacccgttgctgggctcaggcatc +taccatgtccctgtaggcccgagtttcgacgcctgggagcgaaaccaccgacccggtgatgaactttatctt +accgagcttgcaacagct-------------------------------------------------tggtt +tgaggccaacaggccggctcggtccctcacacccacacctcatgatacagcctcaccagattaccccgtggc +gggtgccggcctcccaccggtggccgataccggcccggtacagcccgccctgaccataacagaggatacagc +tc------------gggcggccaatcttgcattggagattg------------attctcggaccgagctagg +acgggcttgt---gccggctgcactattagccctggggtagtccgctaccaatttaccgcgggcgttcctgg +gtctggcaaatcgaggtctatacagcagggtgatgttgacgttgtggttgtgccaacccgcgagctccgcgg +taattggcgccgccgcgggtttgctgcatttacaccgcactcggccgcccgtgttactagcggtcgtcgtgt +tgtcatagatgaggcaccatctctcccgcctcacttgttattactgcatatgcagcgcgcctcatcagtgca +ccttcttggcgatcctaaccagattcctgcaattgacttcgagcatgctggccttgtccccgcgatccgccc +cgagctcgcccccaccagctggtggcacgttacgcaccggtgccccgcggacgtctgcgagcttatacgtgg +ggcgtaccccaagatccagactaccagccgtgtgctcagatctctgtactggggtgaa------ccccccgt +tggccagaggctggttttcacgcaggccgcaaaagctgccaatcctggtgcgattactgttcatgaggccca +gggggctactttcactgaaaccactatcatcgcgacggctgatgctagaggcctcatacagtcgtctcgagc +gcatgccatcgttgcgctcacccgtcacacagagaagtgtgtcattttggacgcccccggactgctccgcga +ggtaggcatatcggatgtgatagttaataatttc------------------------------ttcctagc +tggcg--gtgagattggccaccaccgcccctctgtcatacctcgcggcaaccccgatcgaaatcttgacac- +-----tctccaggcctttcccccctcttgccagatcagcgccttccaccagctggccgaggaacttggtcat +cggcctgcgcccgtggcagctgtcctcccgccctgccctgagctcgagcagggcttgctctatatgccacag +gagctcacggtgtccgacagtgtcttggttttcgagctaactgatatagtccactgccgcatggctgcccct +agccagcgcaaggccgtcctttccacgctcgttgggcgttacgggcgtcggacgaagttatatgaggccgcc +cactcggacgtgcgcgaatcacttacaaggttcatccccaccatcggccctgtgcaggccacaacgtgcgag +ctttatgaactggtcgaggcgatggtggagaaaggtcaggacgggtcagctgtgctcgagcttgacctttgt +aatcgagatgtgtcccgaataacgtttttccagaaagactgtaataagtttacaaccggggagaccattgcc +catggcaaggtgggccagggaatatcagcctggagcaagaccttttgtgctttattcggcccctggttccgg +gccatagaaaaacagatattagccttgctcccgcccaacatcttttacggtgatgcttatgaggattccgtg +ttctctgccgctgtcactggtgcagggtcgagcatg---gtctttgagaatgatttttcagaatttgacagt +acccagaataacttctcact------------------tggccttgaatgcgtgattatggaagaatgtggc +atgccccaatggttagttagattgtatcacctggtgcgatctgcctggattctacaagccccaaaggagtct +tttaaaggtttttggaagaagcactccggtgagcctggtacattgctctggaataccgtctggaatatggcg +gttatagctcactgctatgaattccgtgacttcagggttgccgcgtttaaaggggacgactcggtggttctt +tgcagtgactatcgtcagagtcgtttcgcggcgacattgattgcgggctgcgggctgaagcttaaagttgac +tatcgtcctgtcgggctctacgccggagttgtggttgcccccggtctaggattgctgcctgatatcgtccgg +ttcgccggacggctgtcagaaaagaattggggccccggccctgaaagagcggagcagttacgcttagccgtc +tgcgactttttgagaaagttgacgaacgttgctcaggtctgtgttgatgttgtgtctcgtg-------ttta +tggggtgagccctgggcttgtacataaccttatcggcatgttacaaactattgccgatggtaaggcccacta +cactgaaactgtgaagcctgtgctggaccttacaaattctattgtgcagaggttagaatgaataacatgtt- +t----------------tctgcatcgcccatggg------------atcgccatgcgcactggggttgttct +gctgttgctcctcgtgtttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagtcgactggcc------------gccgtcgtgggcg-gcgcggcggcggttc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctattttcat---- +--------------ccaaccaaccccttcgccgctgacgttgactcacatcccgggtctggagccaaacccc +ggcaaccagcccg---------------cccccttggtacctcctggcgcgacttgtccca----------- +------gcgcccccccgctgcctcgcgtcgtcgatctacccca---------actggggctgcgccgttgac +tgctgtttcacccgcacctgacacggcgcctgtccctgatgtagactctcgcggggctattttgcgtcgcca +gtataatctctcaacttcgcctttaacttcaactgtcgcttcaggtactaatcttgttttgtatgccgcgcc +gcttaacccccttctgccccttcaggatggaactaatacccatattatggccactgaggcatccaattatgc +ccagtatcgagttgtccgagctacaatccgttatcgacctttggtgcctaatgcagtcggcggttacgcaat +ctctatttctttctggccccaaactactactacccccacctctgtcgacatgaattcaattacttcaactga +tgttaggattcttgtccaacccggtctagcctctgaacttgttataccaagtgagcgtctccactatcgtaa +tcagggttggcgctctgtggagacttctggcgtggctgaggaagaggccacttctgggcttgtcatgctttg +catccacggctcccccgtcaattcatacaccaataccccttataccggtgctctgggccttcttgattttgc +gcttgagattgaattccggaatctgactccagggaacactaacacacgcgtctcccgttataccagcactgc +ccgccatcgcctgcgtcgtggcgccgacggaaccgccgaacttacaactacggcggccacacggtttatgaa +agatctccacttca---ctgggatgaac---ggggtcggtgaaattggtcgtggcatagccctgacgctgtt +caatatagctgatacacttcttggtggtctgccgacagaattaatttcgtcggccgggggtcaggtattcta +ctcccgccctgtcgtctcagccaatggcgagccgactgtcaagttatatacatcagttgagaatgcacagca +ggacaaggggatcgcgatacctcatgatattgacctaggtgattcccgtgttgtcatccaggactatgataa +ccaacatgagcaagaccggcctactccgtcaccggccccctcccgccccttttccgtccttcgcgctaacga +tgtgttgtgggtgtc-----------------------------actgactgctgctgaatatgac------ +cagactacatatggctcgtcaactaatcctatgtatgtctcagatactgtcacatttgt---taatgtggcc +acaggtgctcaggccgtcgcccgctcccttgattgggctaaagtgactttggacgggcggccgctcactacc +at-----ccagcagcattccaagatattttatgtcc-tccccctccgtggcaagctttctttttgggaggct +ggcaccaccaag--gctggctacccctacaactataacaccacagccagcgatcaaatcctgattgagaatg +cagccgaccac------cgcgttgctgt-ctcaacctatactacaagtttggg--------------tgctg +gtcccgtatctatctc-tgcagtcggtgtgctcgctccgcactctgttctagctgttcttgaggatactgtt +gatt---------accccgctcgtg----ctcatacttttgatgatttctgtcctgagtgccgtaccc---t +tggtctgcagggttgcgcttttcagtc--------tactgttgctgagctacaacgtct------------- +--------taagatgaaggtgggtaaaacccgggagtcttaattaa-tt----ct-tgct----------gt +gccc-ccct-------tc-tatg-ttgat---tgt-tt--------------------tatt-t-------c +ttatttct----gcg----------------tttcgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------aaaa-------------------------- +------------------------------------------------------------------------ +----------- +>MN646689.1/17307/1-7307 |Hepeviridae clone HEPAC100, complete genome +-------------------------------cacag-tctgtg-------------t-----gttcgatgc- +---catggaggcccatcagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggtccggccgtttttatcccgtgttcaaactgatatcct +tattaacttgatgcaacctcgacagcttgtgttccggcccgaagtcctctggaatcatccgatccagcgagt +tatacataatgagctggagcaata---ctgccgagccc-gcgctggccgttgtcttgaagtgggcgcccacc +caagatctattaatgataaccccaatgttctgcaccggtgctttctccgcccggttggaagagacgtccagc +gctggtactccgcccccactcgtggtccagcggctaattgccgccgttctgcgctacgcggtttgccccctg +tcgaccgcacgtattgcctcgacgggttctcccgctgcgcctttgccgctgagaccgggattgctttatact +cactgcatgacctttggccttcggatgtcgcggaggctatggctcgccacgggatgacgcgcttgtatgccg +ccctccaccta-ccccctgaagttctgctaccacctggaacttaccacacaacctcctatcttctgattcac +gacggcaatcgtgccgtcgtaacttatgagggggatactagtgcgggttataaccacgatgtgtctatactt +cgtgcatggatccgcaccactaaaatagttggtgatcacccgctggtaatagagagggtccgcgccattggc +tgccattttgtcttactccttactgcagcccccgagccgtccccaatgccttatgtcccgtaccctcgttca +acagaggtgtacgttagatctatatttggtcctggc---------gggtcgccttccctttttccatcagcc +t----------gctctaccaaatcta-catttcatgccgtcccggtccatatctgggaccggcttatgctct +ttggtgccaccctagatgaccaggccttttgttgttcacggctcatgacctacctccgcggaattagttata +aagtgaccgttggcgcacttgtcgccaacgaaggctggaatgcctcggaggatgcgctaaccgctgtgatta +ctgcagcgtatttgactatctgtcatcagcgctacctacgaacacaggctatttctaaaggcatgcgtcgac +tagaggttgagcacgcccaaaaatttatcacaaggctatatagctggttgtttgaaaagtc---------ag +gccgtgattacatccccggacgccagctccaattttacgcgcagtgccgccgctggctctcggctggcttcc +atctggaccctagagttctcgtctttgatgaggcggtcccctgc---cgatgccggagcttcctaaagaa-- +----ggtcgccggaaaattttgttgctttatgaagtggttggggcagga------gtgcacttgttttttgg +----------------agccagcggaaggcctggttggtgactgtggc--------catgataacgaggcct +atgaggggtctgaggtggaccccgccgagcctgctcaccttgatgtctccgggacttatgcggtccacggcc +gtcagcttgaggctctatatagagcgcttaatatcccagatgacattgcagctcgtgcgtcacgtctaacgg +ctaccgtggagcttgccgccagcccaggtagactcgaatgccgcacggtgcttgggaataagatctttcgta +catcgatagctgatggtgcccatcttgaggccaacggccc------------------------tgaacagt +acgtcttgacatttgatgattctcgccaagtgctgggggctgggcctcacagccttacgtacgaacttgtcc +ctgctggtctgcaggttaaaatatcctcc-------aatggcctggactgtaccgccatattccct---cct +ggtggggcgccgagcgctgcaccaggcgaagtggcggctttctgtagcgccctatacaggtacaataggttt +acccagcgccattcgctgactggcgggctgtggctgcaccccgaggggctccttggcctgttcccccctttc +tccccggggcatctttgggagtctgcaaaccccttttgtggtgagagcacactttatacacgaacttggtcc +acatctggtttttctagcgatttctccccacccgaggcggctcatgccgccccagtccctgacat----ggg +gttaacttcgggtgccccctcttccgctagtgatat-----------------ctgggcgtc---------- +---------tccaccgccc----cctgaggggt--------------cggcaaccatctcgccacccacaac +cttggtcggtaagctgcgcggcgggagccgcggcgccgaggcggtgcactacatcggatctcggct------ +------------------------------------------------------------------------ +-tggacgaacc-------------------------------------ttgacaggatgggtgcagcgga-- +---------ctttcacacct----aggccacccgtccgtgagccgtccacaccaccaccggccctaacccca +g---------------------------------------------ttagtaagccagctaatccgcctagc +cttactgcacctagg-------------------------------------ccccccgcccacgagccgcc +cacaccgcc--------------------------------------atcggctcgcaatcgccggc----- +-------------------ttctttatacatatcctgatggggccaaggtgtatgcaggctctttgtttgag +tcagattgttactggctggttaatgcatctaaccctggccaccgtcctggtggtggtctctgccatgcattc +taccagcgcttcccagagtcgt------ttcatccgaccgattttgttatgcgcgaggg---tctcgccgca +tatactctgagcccgcgtccgatcattcatgccgtggcccctgactacagggttgagcagaaccccaagagg +ctggaagcggcatatcgtgagacctgctcccgcctcggcacagctgcctacccactactggggtcagggatc +taccaggtccctgtaggtctaagctttgacgcctgggagcgtaaccatcgcccaggcgatgaactttacctt +actgagccagctgccgtc-------------------------------------------------tggtt +cgaggctaataagcctaccca--------------------------------------------------- +------------------------------------------gccagccctaacagttactgaggacaccgc +cc------------gcacggccaaccttgcgcttgagattg------------actccgctactgaggtggg +ccgtgcctgc---gccggctgtactattaaccccgggattgtccattaccagttcaccgccggggttcctgg +ctccgggaagtctaggtctatacagcagggggatgttgatgttgtggtcgtgccaactcgcgagcttcgcaa +cagttggcggcgccgcggctttgctgcttttacacctcacacagcagctcgtgttactgccggccggcgtgt +ggtgatagatgaagcaccttcgcttccaccgcacctgctgctgctccatatgcagcgagcctcatcagtcca +tcttcttggcgaccccaatcagatccctgccattgactttgagcacgccggtctggtcccggcgatccgccc +tgagctagcccctactagttggtggcatgtcacccaccgttgccccgccgatgtatgtgagctcatacgtgg +ggcctacccaaagattcagacgaccagccgtgtgttgagatctctattttggaatgag------cctgcgat +aggtcagaggctggttttcacgcaggcagccaaggccgccaatcccggcgcaattaccgttcacgaggccca +gggggccacgtttactgagactactattatagccacggccgacgctagaggtcttattcaatcttcccgcgc +acatgccatcgttgcacttactcgccatacagaaaggtgcgttattctcgacgctcctggcctattgcgtga +ggtcggcatctctgatataattgtaaataacttc------------------------------ttcctggc +tggtg--gtgaagtgggccaccatcgcccttctatcatcccccgcggcaacccagaccagaacttagacac- +-----cctccaagcgtttcctccgtcttgccaaatcagcgcttaccaccagttggctgaggagctgggccac +cggccggccccagtggccgctgtcctgcccccctgccctgagcttgagcaggggttactttacatgccgcag +gagcttacggtgtccgatagtgtcctaattttcgaactcacggacatagttcactgtcgtatggccgcccct +agtcaacgtaaggcggttctttctacgctcgtcggcaggtacggccgccgaacgaagttgtatgaagcggcc +cattctgatgtccgcgagtctttaaggaggttcatccctactatcggaccggttcaggtcaccacatgtgag +ctatatgaaatggttgaggccatggtggagaagggccaggacggttccgctgtgcttgagcttgacctctgc +aaccgtgatgtctcgcgtattacattcttccagaaggattgtaacaaatttacaacaggtgagactattgcc +catggtaaggtgggccaggggatttcggcttggagtaaaaccttctgtgctttatttggcccatggttccgt +gccattgagaaggagattctggctctgctcccacccaatattttctatggcgatgcctatgaggagtcagtg +ttctctgcgtccatttctggggctggctccagtatg---gtttttgagaatgatttttctgagtttgacagc +acccaaaataatttctctct------------------tggccttgagtgcgttattatggaggagtgtggc +atgccccaatggcttacccgactgtaccatttagttagatcagcctggatcttgcaagccccgaaagagtct +ttgaaaggcttctggaagaagcattccggcgagcctggcactctcctttggaacaccgtctggaacatggcg +atcatagcacactgctatgaattccgtgacctgagagtggcagcgtttaaaggggatgattcagtggttctc +tgcagtgattaccgtcagagccgtaatgcggccactctgatagccggttgtgggttaaaattgaaggttgat +taccggcctataggtttgtatgccggcgttgtagtggctccgggcctcggggcacttcctgatgttgtccgc +tttgcaggtcggttgtctgagaagaattggggcccgggccccgagcgcgccgaacagttgcgcctagcagtt +tgtgattttcttcgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacagactattgctgatggaaaggcccattt +tactgagactgttaagcccgtgctggatcttacaaactctatcatacagaggttagaatgaataacatgtt- +c----------------tgtgcattgcccatggg------------atcgccatgtgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaatccggggctggagctcgcccta +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgccgtcgatctacccca---------actggggctgcgccgttaac +tgctgtctcaccagcgcctgatacggccccagtccctgatgttgattcccgtggcgctatcttgcgccgtca +gtataatctgtccacctctcctctaacttcatctgttgcctctggaactaatcttgtcttgtatgctgcccc +gcttaatcctcttctgcctcttcaggacggcaccaatactcatatcatggcgactgaagcgtctaattacgc +tcagtatcgggttgttcgggctacaatccgctatcgccccttggtgccgaatgccgtcggtggttatgcaat +ttctatttcattctggcctcagactacaactacacccacctctgttgatatgaattccattacttctactga +tgttaggattttagtccagcctggcatagcctctgagttggtcatcccgagtgagcgccttcactaccgtaa +tcaaggctggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggcttggtcatgctttg +tattcatggctcccctgttaattcttatactaacacgccctatactggggcactggggctccttgattttgc +actcgagcttgaatttagaaatttgacccccgggaacactaacacccgtgtgtcccgttacactagtacagc +ccggcaccgcctgcgtcgtggtgccgatgggacagctgagcttacaaccactgcagccacacgttttatgaa +ggacttgtacttca---ccgggacaaat---ggtgttggcgaggtgggtcgtggtatagccctaacgctatt +taatcttgctgatacacttctcggtgggttgccgacagaattgatttcgtcggctggaggtcaactgtttta +ctcccgcccggttgtctcagccaatggcgagccaactgttaagttatacacctctgtcgagaatgcacagca +ggataagggtattgctataccacacgatatagacttaggggattcccgtgtggttatacaagactatgacaa +ccaacatgaacaggaccggcctaccccgtcgccggccccatctcgtcccttctcagtccttcgggctaatga +tgtcttgtggctytc-----------------------------tctgactgcagctgagtatgac------ +cagaccacctatggctcgtcgactaatcctatgtatgtttcagatactgtcacatttgt---taatgtggcg +acgggcgcccaggctgttgcccgatcccttgattggtccaaggtcactttggacggccggccacttactacc +at-----ccagcagtactctaagacattctatgtgc-tgccgcttcgtggcaagctttccttttgggaagct +ggtacgactaag--gctggctacccttacaattacgacactactgctagtgaccaaattctgattgagaatg +cagccggtcat------cgtgttgctat-atctacttacactactagtcttgg--------------cgccg +gccctgtgtctgtttc-tgcagtcggcgtccttgctccgcactctgctttagctgtgcttgaagatactatt +gatt---------atcctgcccgtg----cccatactttcgatgatttctgccctgagtgccgcaacc---t +cggcctacagggctgtgctttccagtc--------tactattgctgacacacagactgt------------- +--------gagaatgaaggtaggtaagacccgggagtcttaa------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MN646695.1/17341/1-7341 |Hepeviridae clone HEPAC933, complete genome +---------------------------------------aatg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttctatcccgtactcagactgatatcct +tattaacctgatgcaaccccggcagcttgtttttcggcctgaagttctctggaatcacccgatccagcgggt +tatacataatgagctggagcaata---ctgccgagccc-gcgctggccgctgtcttgaggtgggcgctcacc +caagatccatcaatgataaccccaatgttctgcaccggtgcttccttcgcccggtcggtagagacgtccagc +gctggtattctgcccctactcgtggcccagcggctaactgccgccgctctgcgctacgtggtttgccccctg +tcgatcgtacatactgcttcgacgggttctcccgctgcgcctttgccgctgagaccggaattgctttatact +cactgcatgacctttggccctcggacgttgcggaggccatggctcgccacgggatgacgcgattgtatgctg +ccctccaccta-ccccctgaggttctgttaccacctggcacgtaccacacaacttcctaccttttgattcac +gacggcaatcgtgccgtcgtgacctacgagggtgatactagtgcgggctataatcacgatgtgtccatactt +cgtgcatggatccgcaccactaaaatagttggtgatcacccattggtaatagagagagtccgcgccatcggc +tgccattttgtcctactcctcactgcagcccccgagccatccccaatgccttatgttccgtaccctcgatca +acagaggtgtatgttagatccatatttggtcctgga---------gggtcaccctctctttttccgtcagcc +t----------gctctactaagtcta-cattccacgccgtcccggtccatatctgggaccggctaatgctct +ttggtgccaccttagatgaccaggccttttgctgctcgcggcttatgacttatctccgcgggattagctaca +aagtgactgtcggcgcacttgtcgccaacgaaggctggaatgcctcggaggatgcgctcaccgctgtgatta +ctgcagcatatctgaccatctgccatcagcgctacttacggacacaggccatttccaaaggcatgcgtcggt +tagaggttgagcatgcccaaaaatttatcacaaggttatatagttggctgtttgaaaaatc---------ag +gccgtgactacatccccggtcgccagctccagttttatgcgcaatgccgccgttggctctcggccggatttc +atctggatcctagagttctcgtttttgacgaggcggtcccttgc---cgctgccggagcttcttaaagaa-- +----ggttgctggaaaattttgttgttttatgaaatggttgggccagga------gtgcacctgctttttag +----------------agccagcggaaggcctggttggtgactgtggc--------catgataacgaggcct +atgaggggtctgaggtggaccccgccgagcctgctcatctcgatgtttctgggacctatgcggttcacggcc +gtcagcttgaggctctatatagagcgcttaatatcccggatgacatcgcggctcgcgcgtcacgcctgacgg +ctactgtagaacttgccgccagcccaggccggctcgagtgccgtacggtgcttgggaataaggcttttcgca +catcaataactgatggtgcccatctcgaggccaacggccc------------------------cgagcagt +acgtcctgacatttgatgactctcgccaggctatgggggctgggccacacagccttacgtatgaacttgtcc +ctgccggcttgcaagtcaaaatatcctct-------aatggcctggattgtactgccatattcccc---cct +ggtggggcaccaagtgcggcaccgggtgaagtggcagctttctgtagcgccttatataggtacaataggttc +acccagcgtcattcgctgaccggcgggctttggctgcaccctgaggggcttcttggcctgttcccccctttc +tccccggggcatctttgggagtctgcaaaccctttttgtggtgagagcacactctatacacgaacatggtct +acatctggtttttccagcgacttctccccacccgaggcggcctatgccgccccagcacccgacat----ggg +gctaccctcggccgcctcctcgtccgctagtgatat-----------------ctgggcgtt---------- +---------cccaccgccc----tctgagaggt--------------cggcgaccgccccaccacccgtagc +ctcagttagtaag-cagccaa---------------------------------------tccgccttgtaa +ctgtggtaattctagagctaatacatgccgacgggcctgacccccttcgcgaggggatgcgtgcatttatca +gaagttttgc-------------------------------------------------------------- +-------------tacacct----tggccccccgctcgtgagccgcctacaccaccaccagctctcaccccg +g---------------------------------------------gcagtaagccagctagcccgtctagc +cccactacacacagg-------------------------------------cctcctgcccgtaagccatc +cacaccgcc--------------------------------------accggctcgcactcgccggc----- +-------------------tcctctacacataccctgatggggccaaggtgtatgcaggctctttgtttgag +tcagactgtgactggcttgttaatgcatctaaccctggccaccgtcctggcggcggtctttgccatgcattt +taccaacgcttcccggagtcat------ttcatccaactgattttgtcatgcgtgaagg---tctcgccgca +tatactctgagcccgcgtccgatcattcacgcagtggcccccgactatagggttgagcagaaccctaagagg +ctggaggcggcatatcgtgagacctgctcccgcctcggcacagccgcgtaccctctactggggtcaggaatt +taccaggtccctgtgagtttaagtttcgacgcctgggagcgtaaccaccgcccaggtgatgaactgtacctt +actgagccagccgccgcc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaatcactgaggacaccgc +cc------------gcacggctaaccttgcgcttgaaattg------------actctgccactgaggtggg +ccgtgcttgc---gccggctgtactattaaccccgggattgttcattaccagttcactgccggggtccctgg +ctctgggaagtctaaatctatacagcagggggatgttgatgtcgtggtcgtaccaactcgtgagcttcgtaa +cagttggcgacgccgtggctttgctgcttttacacctcatacagcagctcgtgttactgccggccggcgtgt +ggtgatagatgaggcaccttcgcttccaccgcacttgttgctgctccatatgcagcgagcctcatcggtcca +tctcctcggtgaccccaaccagattcctgccattgactttgagcacgctggcctggtcccagcgattcgtcc +tgagttagctcctactagttggtggcatgtcacccaccgctgccccgctgatgtatgtgagctcatacgcgg +ggcctaccccaagatccagacgaccagccgtgtgctgagatctttattctggaacgag------cctgcggt +gggtcagaggctggttttcacgcaggcagctaaagcggccaaccctggcgcaatcaccgtccatgaggccca +gggtgccacgtttactgagactactatcatagccacggccgatgctagaggtcttattcaatcttcccgcgc +acatgccatcgttgcgctcactcgccatacagaaaagtgcgtcattctcgacgctcctggcctgttgcgtga +ggtcggcatctctgatataattgttaataacttt------------------------------tttctggc +cggtg--gcgaagtgggccaccaccgcccctcaaccataccgcgcggcaacccagaccgaaacttagacac- +-----tctacaggcgttccccccgtcctgccaaattagtgcctaccaccaactggctgaagagctgggccac +cggccggcccctgtggccgccgtcctgcccccctgccctgagcttgagcaggggttactctatatgccgcag +gagcttacggtgtctgatagcgtcctaacttttgaactcacggacatagttcactgccgtatggccgccccc +agtcagcgtaaggcggtcctttctacgctcgtcggtaggtacggccgccgaacgaagctgtatgaagcggcc +cattctgatgttcgtgagtctttaggaaggttcatccctactatcggcccggtccaggccaccacatgcgag +ctatatgagctggttgaggctatggtggagaagggtcaggatggctccgccgtgcttgagctcgacctctgc +agccgtgatgtctcgcgtatcacattcttccagaaggattgtaataaatttacaacaggtgagactatcgcc +cacggcaaggtgggccagggcatttcggcttggagtaagactttctgtgctttattcggtccgtggttccgt +gctattgagaaggagatcctggctttgctcccacccaacattttttatggcgatgcctatgaggagtctgtg +ttttccgcagccatttctggggctggccccagtatg---gtttttgagaatgatttctctgagtttgatagc +rcccaaaacaatttttctct------------------tggccttgagtgtgtcattatggaggagtgtggc +atgccccagtggcttatccgactgtatcatttagttagatcggcctggactttgcaagcccctaaagagtct +ttgaaaggtttctggaagaagcattccggcgagcctggcaccctcctttggaacactgtctggaatatggct +atcatagcacactgctatgagttccgcgacctgagggtggcagcgtttaagggggatgattcagtggttctt +tgcagtgattaccgccagagccgcaatgcggccaccctgatagccggctgtgggttgaaattgaaggttgat +taccggcccataggtttgtacgccggcgttgtagtggccccgggtctcggggcacttcctgacgttgtccgg +ttcgccggacgactatctgagaagaactggggtccgggccccgagcgcgccgagcagttgcgcctagcagtt +tgtgatttccttcgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacagactattgctgatgggaaggcccactt +tactgagactgtcaaacctgtgctggatcttacaaattctattatacagaggttggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gttgttgctcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcttaccacaatccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcatcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtatcaccagcgcctgacacggccccagttcctgatgttgactctcgtggtgctatcttgcgccgtca +gtataacttgtccacctctccactgacctcatctgttgcttctggaactaatcttgtcctgtatgccgcccc +gcttaaccctcttctgcccctccaagacggcaccaatactcacatcatggctactgaggcgtctaactacgc +ccagtatcgggttgtccgggctacaatccgttatcgccctttggtgccgaatgctgtcggtggttatgcaat +ttcaatttccttctggccccagactacaaccacacccacctctgttgatatgaattctatcacctctactga +tgttaggattttagtccagcctggcatagcctccgagcttgtcatcccgagtgagcgtcttcactatcgtaa +tcaaggctggcgttctgttgagacatctggtgtagctgaggaggaggcgacatcaggcctggtcatgctttg +tattcatggctcccctgttaattcctataccaatacaccttatactggggcattagggctccttgactttgc +actcgagctcgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgatatactagtacagc +ccggcaccgtttgcgccgcggtgccgatgggacagccgagcttacaaccaccgcagccacacgttttatgaa +ggacttgcatttca---ctgggacaaat---ggagttggtgaggtaggccgcggtatagccctaacgctatt +taatcttgctgatacacttctcggtgggttgccgacagaattgatttcgtcggctggaggtcaactgttcta +ttcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacttctgtcgagaatgcacagca +ggacaagggcattgctataccgcatgatatagacttaggggattcccgcgtggttatacaagactatgacaa +ccaacatgagcaggaccggcctaccccgtcgccggccccgtcccgccccttctcggtccttcgagccaatga +tgttctgtggctctc-----------------------------tctgactgcggctgaatacgac------ +cagaccacctatggctcgtctaccaaccctatgtacgtttcagatacagtcacacttgt---taatgtggca +acaggtgcccaggccgttgcccgatcccttgattggtccaaggtcactttggatggtcggccacttactact +at-----acagcagtactctaagacattttatgtac-tgccacttcgtggcaagctttccttttgggaagct +ggcacgactaag--gctggctacccttacaattataacactatcgctagtgaccagattctgatcgagaatg +cagccggtcac------cgtgttgccat-atctacttatactactagtcttgg--------------tgccg +gccctgtgtytgtttc-tgcggtcggcgttcttgccccgcactctgctttagctgtgcttgaagatactatt +gact---------atcctgcccgtg----cccatactttcgatgatttctgccctgagtgccgcaatc---t +tggcttgcagggctgtgctttccagtc--------tactgttgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcctaattaa-tt-----c-cccc-ttt------gt +gccc-cct--------tc-taaa------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MN629976.1/17094/1-7094 |Hepeviridae isolate HEV_feces/mouse, partial genome +------------------------------------------------------------------------ +-------gaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagttggtttttcgacctgaagtgctctggaatcatcctatccaacgggt +tatccacaatgaacttgaacagta---ctgtcgggccc-gggctggtcgttgtctagaggttggggcccacc +caagatccatcaatgacaacccaaatgttctgcaccggtgcttcttacgaccagttgggagagatgttcagc +gctggtactctgctcctacccgcggccctgcggctaactgccgccgttctgccttgcgtggcctcccccccg +ttgatcgtacctattgttttgatggattctcccgctgctcatttgccgcagaaactggggttgctctttatt +ctctgcatgacctctggccggccgatgttgcggaggctatggcccgacacgggatgacacgcttgtatgctg +cactacatctc-ccccctgaagtactactaccacctggtacttaccatacaacttcataccttttgattcac +gacggtgatcgtgctgttgtgacctatgaaggtgacactagtgcaggctacaaccatgatgtttccatactt +cgtgcatggatccgcacaactaagatagtcggcgatcatccgctggtgatagagcgtgtgcgggctattggc +tgccattttgtgctactgcttactgcagcccctgagccgtcaccaatgccttatgttccatacccccggtcg +acagaggtgtatgtccgctccatattcggtcctggc---------gggtctccatccctattcccatcagct +t----------gctctacgaaatcca-catttcacgctgtcccggttcatatttgggaccggctcatgcttt +ttggcgctactctggatgatcaggcgttttgctgttcacggcttatgacctacctccgcgggattagctaca +aggtcactgttggcgcccttgtcgctaatgaggggtggaatgcttcggaggacgctctcaccgctgttatta +ctgcagcttatttgaccatttgccatcagcgttacctccgtactcaagctatatccaagggtatgcgccgac +tggaggttgagcatgcccaaaaattcattacaagactttatagttggctgttcgagaagtc---------cg +gccgtgattatatccccggccgccagctccagttttatgcacagtgccgccgttggttatcggcgggtttcc +atcttgacccaagggtgcttgtctttgatgagtctgtgccctgc---cgttgtaggacayttcttaagaa-- +----ggctgtgggtaagttctgctgttttatgaagtggttgggacagga------gtgcacctgcttcttgg +----------------aaccagcagagggtctagttggcgaccatggc--------catgataatgaagcct +atgagggctctgaggtcgatcaggccgagcccgcccatcttgatgtttctgggacttatgccgtccatggcc +gccaacttgaggccctgtatagggcacttaacatcccgcatgacatcgctgcccgagcctcccgtttgactg +ccaccgtcgaactcgttgcaggtccagaccgcttggagtgccgcactgtgctcgggaataagactttccgga +cgacggtggttgatggcgcccatcttgaggcgaacggccc------------------------cgagcagt +acgttctttcgtttgatgcttctcgccagtctatgggggccgggccgcatagtctctcctacgagcttactc +ctgctggtttgcaggtcaagatttcatct-------aatggcctggattgcactgcaacattcccc---ccg +ggcggcgcccctagcgctgccccgggggaggtagcagctttttgcagtgccctttacaggtataataggtgc +actcagcgccattcgcttataggtggcttgtggctgcaccctgaggggttgttgggtatcttcccccctttc +tctcccgggcacctttgggagtccgctaaccctttttgtggggagggaaccttgtacacccggacatggtca +acatctggtttttctagtgacttttccccccctgaggcagccgttgcagtgccggctgctactcc----ggg +gttacgcc---accctacacctcctgctagtgacat-----------------ttgggtgtt---------- +---------accgccacct----tttgaagaat--------------ttcaggttgatacagcccccgctcc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcccgctcagccatctagc +cccgctgggccaaaa-------------------------------------gcccccgtgcgtaagccgcc +aacaccacc--------------------------------------atccttgcgcgcccgccgcc----- +-------------------ttctttacacctacccggatggggcaaaggtgtacgcggggtcactgtttgag +tctgactgtgattggctggtcaatgcgtcgaatcccggccatcgtcccggaggcggcctttgccatgccttc +taccaacgctaccccgagtctt------tccacccaactgagttcattatgcgcgacgg---tcttgccgcg +tacactttaactccccggcctattattcatgcagtggcccctgattatagggttgagcataacccaaagagg +cttgaggcagcataccgagagacttgctctcgccgcggtaccgccgcctatccactcctcggctcgggcata +taccaagttcccgtcagcctcagctttgacgcctgggagcgtaaccaccgccccggggacgagctttactta +accgacctcgccgctacc-------------------------------------------------tggtt +cgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------gccggccctcacaataactgaggatgcagc +cc------------gcacagccaacctagcactggagatcg------------atgctgctacggaggttgg +ccgggcttgt---gccggctgtgcagttagtcctggggttgtgcactatcagtttactgctggcgtcccagg +ttcggggaagtcgcgttctatacagcagggggatgttgacgtagtggttgttcccacccgggagctccggaa +tagttggcgtcgccggggctttgcagcttttacacctcatacggcggcccgtgtcaccacgggccgtcgtgt +tgtgattgatgaggccccatctctcccaccgcatttgctgctactacatatgcagcgggcctcgtcggtcca +ccttctcggcgacccaaaccagatccctgccatagacttcgagcatgccggcctggtccccgccatacgtcc +tgagcttgcgcccaccagttggtggcatgtcacccatcgctgccccgctgacgtgtgcgagcttatacgcgg +ggcttaccccaaaattcaaaccactagccgcgtgctgcggtctttattctggaatgag------cctgccat +tggccagaagttagttttcacccaggctgctaaggccgccaaccccggtgcgattacggtccacgaggccca +gggcgccactttcacggaaactacaatcatagccacggctgatgctagggggctcatccaatcttcccgagc +tcacgccatagtcgcactcacccgccacacagagaagtgcgttattcttgacgcccccggcttgctacgtga +ggttggtatatcggatgtgattgttaacaatttt------------------------------ttcctcgc +cggcg--gggaggtaggtcaccatcgcccctctgtgatacctcgtggtaatcctgaccagaacctcgcgac- +-----actacaggcctttccaccttcctgccagattagtgcctatcaccagttagctgaggaacttggccac +cgcccagctcccgtcgccgctgtcttgcccccttgccctgaacttgagcaaggcctgttatatatgccgcag +gagcttacggtgtctgatagcgtgctggtctttgaactcacggacatagttcactgccggatggctgccccc +agccagcggaaggccgtcctatcgacgctcgtgggtaggtacggccgtcggacgaagctgtatgaagcagct +cactctgacgtccgtgagtccctggctagattcatccccaccatcgggcccgttcaggctactacgtgtgaa +ttatatgagctggttgaggccatggtggagaaaggtcaggatggctctgccgtgcttgagctcgacctctgc +aaccgtgatgtatcgcgtatcacatttttccagaaagattgtaacaaattcaccacaggggagaccattgcc +cacggcaaggtcggccagggcatctcggcttggagtaagaccttctgtgccctgtttggtccgtggtttcgt +gctattgaaaaagaaatactagccctgctcccgcctaatattttctacggcgacgcatacgaggagtctgtg +ttcgccgccgctgtgtcgggggcaggttcaagcatg---gtatttgagaatgatttttcagagtttgatagc +actcaaaataacttctccct------------------tggtctcgagtgtgtagtcatggaggaatgtggc +atgcctcaatggctaatccggttgtaccatttggttcggtcggcctggattctacaggcgccgaaggagtct +cttaagggattttggaagaagcattctggtgagccaggcaccctcctctggaacactgtttggaatatggcg +atcatagcacattgctatgaatttcgtgattttagggttgccgctttcaagggagatgattccgtggtcctc +tgtagtgactaccgtcagagccgcaatgcagcggccctgattgcaggttgcgggctcaaactgaaggttgac +taccgccctattgggttgtatgctggcgtggtggtggcccctggtctggggacgctacccgatgtggtgcgc +tttgccggccggctgtctgagaagaactggggccccgggccggagcgggctgagcagttgcgcctagctgtt +tgtgatttccttcgagggttaacgaatgttgcacaggtatgtgttgatgttgtatcccgag-------ttta +tggagttagccctgggttggtacataaccttattggcatgttgcaaaccatagctgatggcaaagcccattt +tacagagactgttaaacctgtgcttgaccttacgaattctatcatacagcgggtggaatgaataacatgtc- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgccgatgttgtaccgcaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgtgatcagtccca----------- +------gcgcccctccgctgccccacgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgccatatcacctgcccccgatacagctcccgtgcctgatgttgactcgcgcggcgccatattgcgacgcca +gtacaatttatccacatccccgcttacatcatctgttgcttcgggtactaatctggttctttatgctgcccc +gctaaaccctttgctgccccttcaggatggcaccaacactcacatcatggccactgaggcatccaattatgc +ccagtatcgggttgtccgtgctacgattcgttacaggccattggtgccaaatgctgtcggcggttatgcaat +atctatttctttctggcctcagactactactacccctacgtctgttgatatgaactctattacttccactga +tgttaggattctagttcagcccggtattgcttctgagttggttatccccagtgagcgcctccattatcgtaa +ccagggttggcgctctgtggagacctcgggtgtggctgaagaggaggctacttctggtttggtaatgctttg +tatccatggctctcctgttaattcctacaccaataccccctataccggggcgcttggactccttgatttcgc +tttagagcttgagtttaggaacctgacacccgggaacaccaacacccgtgtgtcccggtatacaagcacagc +ccgtcaccggctgcgccgcggtgctgatggcaccgccgaacttaccaccacagcggccacgcgcttcatgaa +ggacctgcacttca---ccggtacgaat---ggggtcggtgaagtgggtcgtggtattgctctcacactctt +taatcttgctgacacgcttctcggtggtttgccgacagaattaatttcgtcggctgggggacagttattcta +ctcccgccccgtcgtctcagccaatggcgagccgactgtcaagttatacacatctgttgagaatgcgcagca +ggataaagggatcgccatcccacatgacatagatctgggtgactctcgtgtggtcatccaagactatgacaa +ccagcatgagcaggatcgacccaccccctcgcctgccccttctcgccctttttcggttcttcgcgctaatga +tgttctttggctttc-----------------------------tctcaccgccgccgagtacgac------ +cagaccacatatgggtcgtccaccaacccgatgtatgtctcggatactgtcacatttgt---caacgtggct +acaggagcccaggctgtcgcccgttccctcgactggtctaaagttactctggacggccgccctcttactact +at-----ccagcagtattccaaaacattctatgttc-tcccgcttcgcgggaagttatctttctgggaggcc +gggactactaag--gccggttatccctataattacaacacaactgccagtgatcagattctgattgaaaatg +cggctggtcat------cgtgttgctat-ttctacgtataccaccagcttggg--------------cgctg +gccctgtgtctgtttc-tgcagttggtgttttagccccacattcggcccttgcagtccttgaagacactatt +gatt---------accctgcccgtg----cccacacttttgatgatttttgcccggagtgtcgcgctc---t +tggtttgcaggggtgtgccttccagtc--------tactattgctgagcttcagcgtct------------- +--------ta-------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MN401237.1/17232/1-7232 |Hepeviridae isolate BOUG3, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---ccaggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggtccggccgtttttatcccgtrttcaaactgatatcct +tattawcwtgatgcaacctcgacaacttgtgttccggcccgaagttctctggaatcatccgattcagcgagt +tatacataatgagctggagcaata---ytgccgagccc-gcgctggccgttgtcttgargtgggtgcccayc +caagatctattaatgataactccaatgttttgcaccggtgctttctmcgcccggttggaagagacgtccagc +gctggtactccgctcccactcgaggtccggcggctaattgccgccgttctgcgctacgcggtctgccccctg +tcgatcgcacatattgcttcgacgggttctcccgctgcgccttcgccgctgagaccgggatcgctttatact +cattgcatgacctttggccttcggatgttgcggaggctatggctcgccatgggatgacgcgcttgtatgctg +ccctccacctg-ccccccgaagttctgttaccgcctggaacttatcacacaacctcttatcttctgattcac +gacggcaatcgtgccgtcgtgacttatgagggggatactagtgcgggttataaccacgatgtgtctatactt +cgtgcatggattcgcaccaccaaaatagttggtgatcacccgctggtaatagagagggttcgcgccattggc +tgccattttgtcttactccttactgcagcccccgagccgtccccaatgccttatgttccgtaccctcgytca +acagaggtgtatgttagatccatattyggycctggc---------gggtcrccttcccttttyccatcagcc +t----------gctcyacyaagtcta-cattccatgcygtcccggtccatatytgggaccggctratgctyt +ttggtgccaccytagatgaccaggccttttgctgctcgcggcttatgacctacctccgcgggattagttata +aagtgaccgttggcgcacttgtcgccaacgaaggctggaatgcctctgaggatgcactaaccgctgtgatta +ctgcagcgtatctgactatttgtcatcagcgctacctacgaacacaggccatttctaaaggtatgcgtcggc +tagaggttgagcacgcccaaaagtttatcacaaggctgtatagctggttgtttgaaaagtc---------gg +gccgcgatgacattccccatcgacagctccaattttatgcgcagtgccgccgttggctctcggctggcttcc +acctggaccctatagttctcgtctttgacaaggcggtcccctgc---cgatgccggagcttcctaaagaa-- +----ggtcgccggaaaattttgttgctttatgaagtggctcgggcagga------gtgcacttgtttcttgg +----------------agccagcggaaggcctggttggggattgtggc--------catgacaatgaggcct +atgaggggtctgaggtagacccccccgagtctgctcaccttgatgtctctgggacttatgctgtccacggcc +gtcagctcgaggccctatatagagcgcttaatatcccaaatgacatcgcagctcgtgcgtcacgtctaacgg +ctaccgtggagcttgccgccagccctggcagactcgaatgccgcacggtgctcgggaataagatcttccgca +catcgataactgatggtgcccatctcgaggccaacggtcc------------------------tgagcagt +acgtcctgacatttgatgattctcgccaagtgatgggggctgggtcccacagcctcacgtatgaacttgttc +ctgctggtttgcaggttaaaatatcttct-------aatggcctggactgtaccgccatattccct---cct +ggcggggcgccgagcgctgcaccaggcgaagtggcggccttctgtagcgccctatacaggtataataggttc +acccagcgccattcgctgactggcgggctgtggctgcaccccgaggggctccttggcctgttccmccctttc +tccccgggccatctttgggagtctgcaaaccccttttgcggtgagagcacactttatacacgaacctggtcy +acatctggtttctctagcaacttctccccacccgaggcggcttatgccgccccagtccctgacac----ggg +gttaacctcgagtgccccctcttccgctagtgatat-----------------ctgggtgtt---------- +---------tccaccgccc----tctgaggggt--------------cggcgatcgtttcgccacccataac +cccggctggtaagccaactaa---------------------------------------tctact------ +------------------------------------------------------------------------ +-tggtcatac-------------------------------------------------------------- +-------------tacacct----aggccacccgtctgtgagccgtctacaccaccatcggccctgacccca +g---------------------------------------------ttagtaaaccagctaatccgcctagc +cttactgcatctagg-------------------------------------ccccccgcccgcgagtcgcc +cacaccgcc--------------------------------------atcggcgcgtactcgccggc----- +-------------------ttctttatacatatcctgatggggccaaggtgtatgcaggctctctgtttgag +tcagattgctactggttggttaatgcatctaaccccggccaccgtcctggtggtggtctctgccatgcattt +taccagcgcttcccagagtcgt------tttacccgaccgattttgttatgcgcgaggg---tctcgccgca +tacactttgagcccgcgtccgatcattcatgctgtggcccctgactacagggttgagcagaaccccaagagg +ctggaggcggcatatcgtgagacctgctcccgcctcggcacagctgcctatccactactggggtcggggatt +tatcaggtccctgtaggtctaagctttgacgcctgggagcgtaaccaccgcccaggcgatgaactttacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagcctaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacaccgc +cc------------gcacagccaaccttgcgcttgagatcg------------actccgctactgaggttgg +tcgtgcctgc---gctggctgcactattagccccgggattgtccactaccagttcaccgccggggttcctgg +ctccgggaagtctaggtctatacagcagggggatgttgatgttgtggtcgtgccaactcgtgagcttcgcaa +cagttggcggcgccgcggctttgctgcttttacacctcatacagcagctcgtgttactgccggccggcgcgt +ggtgatagatgaagcaccctcgcttccaccgcacctactattgctccatatgcagcgagcctcatcagtcca +tcttctaggcgatcccaatcagatccctgccattgactttgagcacgccggtttggtcccggcgattcgccc +tgagctagccccaactagttggtggcatgtcacccaccgttgccccgccgatgtgtgtgagctcatacgcgg +ggcctacccgaagattcagacgaccagccgtgtgttgagatctttattttggaatgag------cctgcgat +aggtcagaggctggtttttacgcaggcagctaaggccgccaatcccggcgcaattaccgttcacgaggccca +gggggctacgtttactgagactaccatcatagctacggccgacgctagaggtcttattcaatcttctcgcgc +acatgccatcgttgcacttactcgtcatacagaaaagtgcgttattctcgacgcccctggcctattgcgtga +ggttggcatttctgatataattgtgaacaatttt------------------------------ttcctggc +tggtg--gtgaagtgggccaccatcgcccttctayyattccccgcggmaacccagatcggaacttagacac- +-----yctccaagcgttccctccgtcctgccaaatcagcgcttaccaccagttggctgaggagctgggccac +cggccggccccwgtggccgccgtcctgcccccctgccctgagcttgagcaggggttactctacatgccgcag +gagcttacggtgtccgatagygtcctaatttttgaactcacggatatagttcactgccgtatggccgcccct +agtcaacgtaargcggttctttctacgcttgtcggcaggtacggccgccgaacgaagctgtatgaagcggcc +cattctgatgtccgcgagtctttgggraggttcatccctactatcggaccggtccaggccaccacatgtgag +ctatatgaactggttgaggccatggtagagaagggccaggatggttccgctgtgcttgagcttgacctctgc +aaccgtgatgtctcgcgtattacattcttccagaaggattgtaacaaatttacaacgggtgagactatcgcc +catggtaaggtgggccaggggatttcggcttggagtaaaaccttctgtgctttatttggcccatggttccgt +gccatcgagaaggaaattctgactctgctcccacccaatattttctatggcgatgcctatgaggagtcagtt +ttttctgcggctatctctggggctggctcctgtatg---gtttttgagaatgatttttctgagtttgacagc +acccaaaataatttctctct------------------tggccttgagtgtgttatcatggaggagtgtggc +atgccccagtggcttatccggctgtaccatttagttaggtcagcctggattctgcaagccccgaaagagtct +ttgaaaggtttctggaaaaagcattccggcgagcctggcactctcctttggaacaccgtctggaacatggcg +atcatagcacactgctatgagttccgtgacctgagagtggcagcgtttaaaggggatgattcagtggttctt +tgcagcgattaccgccagagccgtaatgcggccactctgatagctggttgtgggttaaaattgaaggttgat +taccggcctataggtttgtatgccggtgttgtagtggctccgggtctcggggcacttcctgatgttgtccgc +tttgctggtcgattatctgagaagaactggggcccgggccctgagcgcgccgaacagttgcgcctagcagtt +tgtgatttccttcgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggagttagccccgggctggtgcataaccttattggcatgctacagactattgttgatgggaaggcccattt +tactgagactgttaagcccgtgctggatcttacaaactctatcatacagaggttagaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggttgttct +gttgctgttcttcgtgcttctgcctatgttgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcagtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaatgcggggctggagctcgcccta +gacagcccgtccg---------------ccccctcggctcctcttggcctgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtttcaccggcgcctgacacggccccagttcctgatgttgactctcgtggcgctatcctgcgccgtca +gtataatttgtccacttctcctttaacttcatctgttgcctctggaactaatctcgtcttgtacgctgcccc +gcttaatcctctcctgcctcttcaggacggcactaatactcacatcatggcgactgaggcgtctaattacgc +ccagtaccgggttgtccgggctacaatccgctatcgccccttggtgccgaatgccgtcggcggttatgcgat +ttctatttccttctggcctcagactacaactacacccacctctgttgacatgaattctattacttctactga +tgttaggattctagtccagcctggcatagcctctgagttggtcatcccgagtgagcgcctccactatcgtaa +tcaaggctggcgctctgttgagacatcgggtgtagccgaggaggaggcgacatcaggcttggtcatgctttg +tattcatggctcccctgttaattcttataccaacacgccctatacaggggcgctggggctccttgattttgc +actcgagcttgaatttagaaacttgacccctgggaacactaacacccgtgtgtcccgttacactagtacagc +ccggcaccgcctgcgccgtggtgccgatgggacagctgaacttacaaccactgcagccacacgctttatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggtgaggtgggtcgtggtatagccctaacgctatt +taatcttgctgatacacttctcggcgggttgccgacagaattgatttcgtcggctggaggacaactgtttta +ctcccgcccggttgtctcagccaatggcgagccaactgttaagttatatacctctgtcgagaatgcacagca +ggataagggtattgctataccacacgatatagacttaggggattcccgtgtggttatacaagactatgacaa +ccaacatgaacaggaccggcctaccccgtcgccggccccatcccgtcctttttcggtccttcgggccaatga +tgtcttgtggctctc-----------------------------tctgactgcagctgaatatgac------ +cagactacttatggctcgtcgacaaatcctatgtatgtttcagatactgtcacatttgt---taatgtggcg +acaggcgcccaggctgttgcccgatcccttgactggtccaaggtcactttggacggccggccactcactacc +at-----ccagcagtactccaagacattttatgtgc-tgccgcttcgtggcaagctttccttttgggaagct +ggcacgactaag--gctggctacccttataattacaacaccactgctagtgaccagattctgattgagaatg +cagccggycac------cgtgttgctat-atctacttacactactagccttgg--------------kgccg +gccctgkgtctgtttc-tgcagttggcgttcttgctccgcattctgctttagctgtgcttgaagatactatt +gatt---------atcccgcccgtg----cccatacttttgatgatttttgccctgagggccgtaacc---t +cggcctacagggctgtgctttccagtt--------tactattgctgagcttcagggtct------------- +--------taaaaagaaggtaggtaagacccgggagttttaa------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444033.1/17283/1-7283 |UNVERIFIED: Hepeviridae isolate HEPAC95 genomic sequence, sequence +--------------------------------------------------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggtccggccgtttttatcccgtattcagactgagatcct +tatcaacctgatgcaaccccggcagcttgtgttccgacctgaagtcctytggaaccatccgattcagcgagt +catacataatgagctggagcaata---ttgccgagccc-gcgctggccgctgtcttgaggtgggcgctcacc +caagatccattaatgacaaycccaatgttctgcaccggtgctttcttcgcccggttggaagagatgtccagc +gctggtattctgcccccactcgtggtccagcggccaattgtcgccgctctgcgctgcgcggyctgccccctg +tcgaccgcacgtactgyttcgacgggttctcccgctgcgcctttgccgctgagaccggggtcgctttatayt +cattgcatgacctctggccttcggacgttgcggaggctatggcccgccacgggatgacgcgtctgtacgctg +ccctccactta-ccccctgaggtcctgctaccacctggcacttaccacacaacctcttatcttctgattcac +gacggcaaccgtgccgtcgtgacttatgagggggatactagtgcgggttataaccacgatgtgtccatactt +cgtgcgtggatccgcaccactaaaatagttggtgatcacccaytggtaatagagagggttcgcgccattggc +tgccattttgtcttactccttactgcagcccctgagccatccccaatgccttatgttccgtaccctcgctcg +acggaggtgtatgttagatccatatttggccctggy---------gggtcgccttctcttttcccttcagcc +t----------gctctaccaaatcta-cattccatgctgttccggttcatatctgggaccggcttatgcttt +ttggtgccaccttagatgatcaggccttctgctgctcgcgacttatgacctacctccgcgggattagctata +aggtgactgttggygcacttgtcgccaacgagggttggaatgcctcggaggatgcgctcaccgccgtgatta +ccgcrgcgtatttgactatttgccatcagcgctacctacgmacacaggccatytccaaaggtatgcgtcggc +tagaggttgagcatgcccaaaaatttatcacaaggttatacagctggctgtttgaaaagtc---------ag +gccgtgactacatccccggtcgccaacttcagttttatgcgcagtgccgccgttggctctcggctggctttc +atctggaccctagagttctcgtttttgacgaggcggtgccctgc---cgctgccggagcttcttaaagaa-- +----agttgccggaaaattttgttgttttatgaartggttggggcagga------gtgcacctgctttctgg +----------------agccagcggaaggcttggttggtgactgtggc--------catgataatgaggcct +atgaagggtctgaggtggaccctgccgagcctgcycatcttgatgtttccgggacctatgcggtccacggcc +gtcagcttgaggctctatatagagctcttaatatcccagatgacattgcggctcgtgcgtcacgcctgacgg +ctactgtggaacttgccgccagccctggccgrctcgagtgccgtacrgtgcttgggaataagacytttcgca +catcaataaccgatggtgcccatctcgaagccaacggtcc------------------------cgagcagt +acgtcttgacatttgatgattctcgtcaggcaatgggagctggccctcacagcctcacgtatgaacttgttc +ccgctggtctgcaggttaaaatatcttct-------aatggcttggattgcaccgctatatttcct---cct +ggcggggcgccaagcgctgcgccaggtgaagtggcggctttttgtggcgccctatacaggtayaataggttc +acccagcgccattcgttgaccggtgggttgtggctgcaccccgaggggctccttggcctgttcccccctttc +tccccggggcatctytgggagtctgcaaaccccttctgcggtgagagcacactttacacacgaacttggtct +acatctggtttttctagcgacttctccccacccgaggcagcccatgctgcyccagcccctgacat----cgg +gttaccctcgggtgycccctcgtctgccagtgatgt-----------------ttgggygtc---------- +---------cccaycgccc----tctgaggggt--------------cggcggycgtcccgccacccgaaac +ctcagttagtaagccagctaa---------------------------------------cccgcc------ +------------------------------------------------------------------------ +-tagtgtcac-------------------------------------------------------------- +-------------tacgcct----acaccccccgtccgtaagccgcctacaccaccaccggctcgtrctcgc +cggctccyttcattatgkaagagtgcggcatgcctcagtggcttatytagtaagccagctaacccgcctagt +gtcactacrcctaca-------------------------------------cccccygtccgtaagccgcc +tacaccacc--------------------------------------accggctcgtactcgccggc----- +-------------------tcctttatacataccctgatggggccaaggtgtatgygggctccttgtttgag +tcagactgtgaytggctggttaatgcgkccaaccctggccaccgccccggtggtggtmtttgtcatgcattt +taccagcgcttcccggagtcgt------tcyatccggctgattttgttatgcgtgaagg---tctcgccgca +tatactttgagcccgcgtccaatcattcatgctgtagcccccgattacagggttgagcagaaccccaagagg +ctagaggcggcatatcgtgagacttgctctcgcctcggtacagctgcttacccactactggggtcggggatt +taccaggtccctgtaggcttaagcttcgacgcctgggagcgyaaccaycgcccagghgaygagctttacctt +actgagccagctgycgcc-------------------------------------------------tggtt +tgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattaccgaggataccgc +cc------------gcacagctaaycttgcgcttgagattg------------attccgctactgaggtrgg +tcgagcttgt---gccggctgcactattagtcccgggattgtccattaccagttcaccgccggggttcctgg +ytccgggaagtctaggtctattcagcagggggatgttgatgttgtggtcgtgccgactcgtgagctccgtaa +tagttggcgacgtcgcggctttgctgcttttacaccccatacagcagctcgtgtcaccgccggccggcgtgt +ggtgatagatgaggcaccctcgctcccaccgcayttgctgttsctccacatgcagcgagcctyrtcggtcca +tcttcttggtgaccccaaccagattcctgccattgactttgagcacgccggtttggtcccagcaattcgccc +tgagcttgcccctactagttggtggcacgttacccatcgctgccccgccgatgtgtgcgagctcrtacgcgg +ggcttacccaaagatccagacgaccagccgtgtgttgcgatcyttattctggaatgag------yctgcagt +gggccagaggctggttttcacgcaggcagccaaagcggccaacccyggtgcaattaccgttcacgaggccca +aggcgccacgtttacggagactactrttatagccacggccgatgctagaggtcttattcagtcttcccgtgc +acatgccatcgttgcacttactcgccatactgaaaaatgcgtcatyctcgacgcycctggcctactgcgtga +ggtcggtatctctgatataattgtcaataatttt------------------------------ttcctggc +tggtg--gagaggtgggccaccatcgcccttctaycataccccgcggtaacccagaccagaacctggacac- +-----cctacaggcgttccctccgtcctgccaaattagtgcctaccaycagctggctgaggagttgggccac +cggccggccccggtggccgccgtcctgcccccytgccctgagcttgagcaggggctgctctacatgccgcag +gagcttacggtgtccgatagtgtcctaatttttgaactcackgacattgttcactgccgcatggccgccccc +agtcaacgtaaggcggtyctttcgacgctcgtcggtaggtacggccgtcgaacgaagctgtatgaagcggct +caytctgacgtccgcgagtctttggggcggttcatccctactattgggccggttcaagctaccacgtgcgag +ctgtacgagctggttgaggccatggtggagaaaggtcaggacggttccgccgtgctcgagcttgacctctgc +agccgtgatgtttcgcgtattacattcttccaaaaggactgcaataaatttacaacaggtgagaccattgcc +cacggcaaggtgggccagggcatytcggcttggagtaagaccttttgcgctttattcggcccgtggtttcgt +gccattgagaaggagattctggcyctgctyccacccaayattttctatggcgatgcctatgakgrgtcagtg +ttttctgcagccatttctggggctggctccagtatg---gtttttgagaacgatttttcwgagtttgatagc +acccaaaacaatttttctct------------------tggccttgaatgcgycattatggaagagtgyggc +atgcccmwgtggcttattcgactgtaccatttagttagatcagcytggaccytgcaagccccgaaagagtct +ctgaaaggtttctggaagaagcattcyggcgagcctggcactctcctttggaacaccgtttggaacatggcg +atcatagcacactgctatgaattccgtgatttgagagtggcagcgtttaagggggatgattcagtggttctc +tgcagtgattaccgccagagccgcaatgcagccaccctgatagccggttgtgggttgaaattgaaggttgat +taccggcctataggcttgtatgccggcgttgtggtggctccgggtctcggggcacttcctgatgttgtccgg +tttgccggtcgattatctgagaagaactggggcccgggcctcgaacgcgccgaacagttgcgcctggcagtt +tgtgattttcttcgarggctgacgaatgttgcgcaggtttgtgttgacgtygtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacagactattgccgatggaaaggcccattt +cactgaaacagtcaagcctgtgttggatcttacaaattctatcatacagaggttggaatgaataacatgtt- +c----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgctcttcgtgcttytgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagycgtctggcc------------gccgtcgtgggcg-gcgcggcggcagtgc +cggcggtg-gtttctggggtgacagg--attgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgatgtcgtatcacaatccggggctggagctcgccctc +gacagccgrcccg---------------tccactcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccycccgccgtcgatctacccca---------actggggctgcgccgctaac +tgctgtctcaccagcgcctgatacgtccccagtccccgatgttgactctcgtggcgctattttgcgccgcca +gtataatttgtccacctcccctttaacctcgtctgttgcttctggaacyaatcttgttttgtatgctgcccc +gcttaatcctctcctgccactccaagacggtaccaatactcatatcatggcaactgaggcgtctaattacgc +tcagtatcgggttgyccgggctacaatccgctatcgccctttggtgccgaacgccgttggtggttatgcaat +ttctatttccttctggcctcagactacaactacacccacttctgttgatatgaattctattacttctactga +tgttaggattctagtccagcctggcatagcctcagagctggtcatcccaagtgagcgtcttcattatcgtaa +tcaaggytggcgctccgttgagacatcgggtgtggccgaggaggaggcgacatcaggcttggtcatgctctg +cattcatggctcccctgttaattcttataccaatacgccctataccggggcattggggcttctygactttgc +acttgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgctacactagtacagc +ccgacaccgtctgcgccgtggtgctgatgggacagccgagcttacaaccactgcggccacacgatttatgaa +ggacttgcacttca---cagggacaaat---ggtgttggcgaggtaggccgcggtatagccctaacgctatt +taatcttgctgatacacttctcggtggattgccgacagaattgatttcgtcggctggaggtcaactgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacatctgtcgagaatgcgcagca +ggacaagggcattgctataccacacgacatagatttaggggattcccgtgtggttatacaagactatgataa +ccaacatgaacaggaccggcctaccccttcaccggccccgtctcgccctttctcagtccttcgagccaatga +tgtcctgtggctctc-----------------------------tctgactgcrgctgaatatgac------ +cagacaacctacggctcgtcgaccaaccccatgtatgtttcagatactgtyacatttgt---taatgtggcg +acaggtgcccaggctgttgcccgttcccttgattggtccaaggtcactttggatggccggccacttactacc +at-----tcagcagcactctaagacattttatgtgt-tgccgcttcgtggcaagctttccttttgggaagct +ggtacgacyaag--gctggctacccttataactataacactaccgctagtgaccagattttaatcgagaatg +cagccggtcac------cgtgttgccat-atctacttacactactagccttgg--------------tgccg +gccctgtgtctgtttc-tgcggtcggcgttcttgctccgcactctgctttagctgtgcttgaagatactatt +gact---------atcccgctcgtg----cccayactctcgatgatttctgccctgagtgccgcaatc---t +cggcttgcagggctgtgcttttcagtc--------tactattgctgagcttcagcgtct------------- +--------taraatgaaggtaggcaaracccgggg---------------------ctc--gtc------gc +gcgc-aca---------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444083.1/17310/1-7310 |UNVERIFIED: Hepeviridae isolate HEPAC154 genomic sequence, sequence +--------------------------gag--tgcta-ctctag-------------t----aggtcgaygc- +---catggaggcccaccagtttatcaaggctcctggcatcactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggttcggccgtttctatcccgtgcccaaaytgacatcct +tattaacctgatgcaacctcgacagcttgtgttccggcctgaagtcctctggaaccatccgatccagcgagt +catacataatgagctggagcaata---ctgccgagctc-gtgctggccgctgtctagaggtgggtgctcacc +caagatctattaatgataatcccaatgttttgcaccggtgctttctccgcccggtcggtagagatgtccagc +gctggtattccgcccccactcgtggcccagcggccaattgccgccgttctgcgctacgcggtttgccccctg +ttgatcgcacgtattgcttcgacgggttttcccgctgcgcctttgccgctgagaccggggtcgctttatact +cactgcatgacctctggccttcggatgtcgcggaggctatggctcgccacgggatgacgcgcttgtatgctg +ccctccatctg-ccccctgaggttttgctaccacctggcacctaccacacaacctcctatcttttgattcac +gacggcaatcgtgccgtcgtgacttatgagggggacactagtgcgggttacaatcacgatgtgtctatactt +cgtgcatggattcgcaccactaaaatagtgggcgatcacccgctggtaatagagagggtccgcgccatcggc +tgccattttgtcttactcctcactgcagccccygagccatccccaatgccttacgtcccgtaccctcgttca +acagaggtgtatgttaggtctatatttggccccggg---------gggtcgccttctctttttccatcagcy +t----------gcaccaccaagtcta-cattccatgctgtcccggttcatatttgggaccggcttatgcttt +ttggtgctaccttagatgatcaggccttttgctgctcgcggctcatgacctacctccgcgggattagctata +aagtgaccgttggcgtacttgtcgccaacgaaggctggaacgcctcagaagatgcgctaactgctgtgatca +ctgcagcgtacctgactatctgtcatcarcgctatctacgaacccaggccatttctaaaggcatgcgtcggc +tagaggttgagcatgcccaaaaatttatcacaaggctatatagctggctgtttgaaaagtc---------ag +gccgtgactatatccccggccgccagctccagttttatgcgcagtgtcgccgttggctctcggctggtttcc +atttggatcctagagttctcgtcttcgacgaggcggtcccctgc---cgctgccggagcttcctaaagaa-- +----agtcgccggaaaattttgttgttttatgaaatggttggggcagga------gtgcacctgttttttgg +----------------agccggcggaaggcctggttggtgactgtggc--------catgataatgaggcct +atgaagggtctgaggtggaccccgctgagcctgcccaccttgatatctccgggacttatgcggtccacggcc +gtcagcttgaggctctgtatagagcgcttaatatcccagatgacattgcggcccgtgcatcgcgtctgacgg +ccactgtggaacttgccgccagcccaggcagactcgagtgccgcacagttcttgggaataagattttccgta +catcaataactgatggtgcccatctcgaggccaacggccc------------------------cgagcagt +acgtcttgacatttgatgattctcgccaggcgatgggggctgggcctcacagcctcacgtatgaacttgtcc +ctgctggtctgcgggttagaatatcttct-------aatggcctggactgcaccgctgtatttccc---ccc +ggtggggcgccgagcgctgcaccgggtgaagtggcggctttttgtagcgccttacacaggtacaataggttc +acccagcgccattcactgaccggtgggctgtggctccaccctgaggggctcctcggtctgttcccccctttc +tccccggggcatctttgggagtctgcgaatcccttttgcggcgagagcacactctatacacgaacctggtcc +acatctggtttctctagtgatttttccccacctgaggcggctcatgccrccccagtccctaatat----ggg +tttaccctcgggcaccccttcttttgctagtgatat-----------------ctgggtgty---------- +---------tccaccgccc----tctgagggac--------------cggctaccgcgccgtcacccgtaac +cccggttagtaagccgactaa---------------------------------------cccgcc------ +------------------------------------------------------------------------ +-tagtcttaataagtctcttacaactttgggcaaagtcatttcagccttggccgaggtgagtaaaaagaaga +agaaaacagattctacatct----gggccccccgtttgtgcgccgcccacctcaccactggccctaacccca +g---------------------------------------------tcagt---ccagctagcccgcctagt +cctaccacacctagg-------------------------------------ccccccgcccgcgagccacc +tgtatcgcc--------------------------------------accggctcgcactcgccggc----- +-------------------tcctttacacatatcctgatggggccaaggtgtatgcaggctctctgtttgag +tcaaattgtgattggctggtcaatgcatctaaccctggccaccgtcctggtggtggcctctgccatgcattt +taccagcgcttcccggagtcgt------tccacccgactgattttgtcatgcgtgaagg---tctcgccgca +tacactctgagcccgcgtccgatcattcatgccgtggcccctgactatagggttgagcagaaccccaagagg +ttagaggcagcatatcgtgagacctgctcccgcctcggcacagctgcttacccgctactggggtcagggatt +taccaggtccctgtaggcttaagcttcgacgcctgggagcgtaatcatcgcccaggcgatgaactttacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacaccgc +cc------------gcacagctaaccttgcgcttgagatyg------------actccgcyactgaggtggg +tcgtgcttgc---gccggctgyactattaaccccgggatcgtccattatcagtttaccgccggrgttcctgg +ttctgggaagtctaggtccatacagcarggggatgttgatgtcgtggtcgtgccaactcgtgaacttcgcaa +cagttggcgacgtcgcggctttgccgcttttacaccccacacagcagctcgtgtyacygctggtcggcgtgt +ggtgatagatgaggcaccttcgcttccrccgcacctrctrctgctccatatgcagcgagcctcatcggttca +tcttcttggtgaycctaatcagatccctgccattgacttcgagcacgctggtttggtcccagcgattcgccc +tgagttggcccctactagttggtggcatgtcacccaccgctgccccgctgatgtgtgtgagctcrtacgcgg +ggcctatccaaagattcagacraccagccgcgtgttgagrtcyttattttggaatgag------cctgcrgt +aggtcagaggytggtttttacgcaggcagccaaggcggctaaccccggygcaattaccgttcatgaggccca +gggtgccacgtttactgagactaccattatagccacggctgacgctagaggtctcatccaatcctcccgcgc +acatgccatcgttgcacttactcgtcatacggaaaagtgcgtcatcctygaygctcctggcctattgcgtga +ggtyggcatttctgatataattgttaataacttc------------------------------ttcttggc +tggcg--gtgaagtgggccaccatcgtccctcwactataccccgtggtaacccagaccagaacytagacac- +-----cctycgagcgtttcctccgtcctgtcaaatcagtgcttaccaccagttggctgaggagctgggccat +cggccagcccctgtggccrccgtcctgcccccctgccctgagcttgagcaggggttactctacatgccgcag +gaactcacggtgtctgatagtgttctaatctttgaamtcacggacatagttcactgtcgtatggctgccccc +agtcaacgtaaggcrgtcctttctacrctcgtcggcaggtatggtcgccgawcgaagttgyacgaagcggcc +cattcwgatgttcgtgagtccttagggaggttcatcyctaccatcggaccagtccaggccaccacatgtgag +ctatatgagytggttgaggccatggtggagaagggccaggatggctccgcygtgcttgagcttgatctctgt +aaccgtgatgtctcgcgtatcacattcttccagaatgattgtaacaagtttacaacrggtgagaccattgcc +cacggtaaggtgggccagggcatttcrgcctggagtaagaccttctgtgctttatttggcccrtggtttcgt +gccattgagaaggagatcctggctctgctcccacccaatattttctacggtgacgcctatgaggagtcagtg +ttttctgcggcyatttctggggccggcgccagcatg---gtttttgagaatgatttttctgagtttgatagc +acccaaaayaatttttctct------------------tggccttgagtgcgttatcatggaggartgtggc +atgccccartggcttatycgactgtaccatttagttagatcggcctggattctgcaagccccgaaagartct +ttgaaaggtttctggaagaagcattccggcgagcctggcactctactctggaacaccgtctggaacatggcg +attrtagcacactgctatgaattccgtgacttgagagtggcagcgttcaaaggggacgattcagtggttctc +tgcagtgactaccgtcagagtcgtaatgcagctaccctgatagccggttgtgggttgaaattgaaggttgrt +taccggcctataggtttgtatgccggcgttgtagtggctccgggcctyggggcacttcctgatgtcgtycgg +tttgcaggtcgattatctgagaagaactggggcccgggcccygaacgcgccgaacagttgcgcctagcagtc +tgtgattttcttcgarggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgcg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgttacagaccattgctgatggaaaggcccattt +tactgagactgttaagcctgtgctggatcttacaaattctatcatacagaggttggaatgaataacatgtc- +t----------------tgtgcattgcccatggg------------atcrccatgcgycctagggctrttct +gctgctgttcttcgtgcttctgcctatgctgcccgcrc---------------------------------- +-caycgr------ccrgccagycgtctggcc------------gycgtcgtgggcg-gcgcarcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaatccggggctggarctcaccctc +gacagycggcccg---------------ccccctcggytcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccycccgtcgtcgatctrcccca---------gctggggctgcgccgctaac +ygctgtctcaccagcgcctgatacggccccagtccctgatgtcgactctcgtggygctattctrcgccgtca +gtataatctgtccacatcccctttaacttcatctgttgcctytgggactaatcttgttctgtatgctgcccc +gcttaatcctctcctgcccctccaagatggcaccaatacccatatcatggcgactgargcgtctaactatrc +tcagtaccgggttgtcagagctacaatccgctatcgccctttggtgccraatgctgtcggtggttatgcaat +ttctatttctttctggcctcaaactacaactacacccacctctgttgatatgaattctattacttctactga +tgttaggattttagtccagcctggcatagcctctgagttggttatcccgagtgagcgccttcattaccgtaa +ccaaggctggcgytctgttgagacgtcgggtgtggccgaagaggaggcgacatcaggcctggtcatgctttg +tattcatggttctcctgttaactcctacaccaatacaccctacaccggggcattggggctccttgactttgc +actcgagcttgaatttaggaatttaacccccgggaacactaacacccgtgtgtcccgttacaccagtacagc +ccggcaccgtttgcgtcgyggtgccgatgggacagctgagcttacaaccactgcagccacrcgttttatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggcgaggtgggccgtggtatagctctaacattatt +taatcttgctgatacacttctcggtgggctgccgacagaattgatttcgtctgctggaggtcaactgtttta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +agacaagggtattgctataccacacgatatagacttaggtgattcccgtgtggttatacaagattatgacaa +ccaacatgaacaggaccggcctacaccgtcgccggccccatcccggcccttttcagtccttcgagctaatga +tgttttgtggctctc-----------------------------tcttactgyrgctgaatacgac------ +cagactacttatggctcgtcgaccaatcctatgtatgtttcagataytgtcacacttgt---taatgtggcg +acgggtgcgcaggctgttrctcgatctcttgattggtccaaggtcactttggacggccggccacttaccacc +at-----ccagcagtactctaagacattttatgtgc-taccgctccgtggcaagctttccttttgggaagct +ggcacgactaag--gccggctacccttataattataacactactgctagtgaccagattctgattgagaatg +cggccggtcac------cgtgttgccat-atctacttatactactagtcttgg--------------cgccg +gccctgtgtctgtttc-tgcggtcggcgtccttgctccgcattctgctttagctgtgcttgaagatactatt +gatt---------accccgctcgcg----cccatactttcgatgatttctgccctgagtgccgtaatc---t +cggcctgcaaggctgtgctttccaatc--------tactattgcagagcttcagcgtct------------- +--------taraatgaaggtaggcaaracccgggt------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MK330953.1/17270/1-7270 |Hepeviridae isolate ChJLLJhwb18 polyprotein, capsid protein, and ORF3 genes, complete cds +---------------------------ggcagacca-cgtatg-------------t-----ggttgacgc- +---catggaggcccaccagttcataaaggctcctggcgtcactactgctattgag---caggcagctctagc +agcggccaattctgccttggcgaatgctgtggtggtccggccctttctatcccgtcaacagacagagatttt +aattaatttgatgcagccccggcagcttgttttccggcccgaggttttgtggaaccaccctatacaacgcgt +gatccacaatgagctcgagcagta---ttgccgagccc-gtgccggccgctgccttgaagtgggtgcccacc +cacgttcaatcaatgacaaccctaatgttttgcatcgttgttttctcaaaccggtcggccgtgatgttcaac +ggtggtacactgcccccacgcgtggtcctgcggcaaattgtcgtcggtccgccctccgcgggcttccacctg +ttgaccgcacatactgttttgacggcttctctggctgcaccttcgccgccgaaacaggcattgccctctact +cgctgcatgacctatggcctgctgatgtcgccgaggcgatggcacgccatggtatgactcggctctatgcag +ccctccatctt-ccccccgaagtgctattacctcctggcacgtatcatactacctcatatcttttaattcat +gatggagatcgtgcagtaattacatacgagggggactctagtgcaggatataaccatgatgtgtcgattctg +cgggcatggatccgtaccaccaaggttaccggtgatcatccgctggtaattgagcgagttcgggcggtcggg +tgccattttgtgctcctccttacagccgctcccgaaccatcgccgatgccctatgttccatacccacgttca +accgaggtctatgttcggtccattttcggccctggt---------ggctcgccatccctttttccatctgcc +t----------gctctactaagtcaa-cgtttcatgccgtccctgtgcatatatgggataggcttatgcttt +ttggtgcgactcttgacgaccaagccttctgctgttccaggcttatgacgtatctccgtggcattagttata +aggtcacggttggcgccctcgttgccaacgagggttggaacgcctctgaggacgcgctgaccgccgtgatta +ctgcggcttatcttactatctgccatcaaaggtacctccgtacgcaggccatttcgaaaggaatgaaaaggt +tggagctcgagcacgcgcagaaatttataacacgcctttatagttggttatttgaaaagtc---------cg +ggcgtgactatatccccggccgccaactgcagttttatgctcagtgccgccggtggctatctgctggttttc +acctcgatcctcgcgtgctcgtttttgacgaagctgccccctgc---cgctgtcggagttttttgcgtaa-- +----agccgcccacaagttttgttgctttatgcggtggctgggtcaaga------ctgcacctgttttcttc +----------------agcccatagaagggagggttggtgagcagggt--------tatgataatgaagcgt +ttgagggatcggatgttgaccctgctgaggaggccaccgtgagcatctccggttcatatattgttaccggcc +gtcagttgcagcctctgtaccaagcgcttggcataccatctgatcttgccgcacgtgccagtcggcttgccg +ctactgtcgaagtctcagatgccgagggccgtctcacctgcaagaccatcttaggcaataaaactttttcaa +cggtatttactgatggcgcccagcttgaggccaacgggcc------------------------agaacagt +atgtcctatcatttgatttgactaaacaaactatggctgccggcccgcatagtcttagttatactttaacat +ctgaaggccttgaagtacatattatttcc-------gctgggcttgattgcaaggctgtcttcccg---cca +ggtgtcgcagccccctctgcctctggggaggtgtcagctttttgttcagctctctataggtttaaccgctat +gtccagcggcattcccttattggaggtttatggtactatcctgagagcttagttggcttgttcccaccgttc +tcccccggccataactgggagtccaccaatcctttctgcggtgagagcaccctttatacccgcacttggtct +gtatcgggcttttccagctgtttctctcctcccgaggctcgtgctccggagctgccaccttcaggt---cac +attgacat----------gtctgtagtcactgatac-cccgcca---------ctggtttct-----tctgt +gcagactcagccccaaacc----cccggtcctg---tcg--------------------cgtccccgctgga +cttgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttgatggttctgctggctctggcttg +actagcgcccctgca---------------gag-------------------cccccggcgcccatgcagcc +tgtaaccca--------------------------------------ac---ccgggtcccgtcggcg---- +-----------------actgctccacacttaccccgatggttcaaaagtgtatgccggatccctctttgag +tccaagtgtacatggctggttaatgcctctaacccgggccaccgccctggtggtggcctttgccatgcattt +taccagcggttcccagagtcct------tcgaccccgctgagtttatcatgtccgacgg---gcttgcagct +tacaccctgacacctcggcccataattcatgctgtcgcccctgactatcgagttgaacacaaccctaagcga +cttgaggccgcctaccgggagacatgctctcgccgtgggacagcagcttaccccctgctcggcgctggtata +tacaaggtccccgtcgggctgagctttgatgcctgggaacgtaaccatcgacctggagacgagctgtaccta +accgagccagctatagcc-------------------------------------------------tggtt +tgaggccaaccgacctaccct--------------------------------------------------- +------------------------------------------ccctgccttgactattactgaggacacggc +gc------------gcacggcgaacctagcattggagctag------------atgcggccactgaggtcgg +ccgggcctgt---gctggctgtcgtgttgaacccggtgtagtccattatcagtttacagctggtgttcccgg +ctccggtaaatcccggtcaatccagcaaggggatgtagatgtaattgtggtaccaacccgtgagctacgtaa +ctcgtggcgccgtcgcgggtttgcagcctatacgccccacaccgcagctcgtgtaacccgtggccgtagggt +tgttattgacgaggccccctcgcttccaccgcacttgcttctgctgcatatgcagcgggcctcgtcagtcca +ccttcttggtgaccctaaccaaatccccgccattgattttgagcatgccggcctcgttccggcgattcggcc +tgagctggttccaactaagtggtggcaccttacccataggtgccctgcagatgtttgcgagctgatccgtgg +tgcatacccaaagatccaaactgcaagccgtgtcctccgctctttgttttggggggag------ccccctgt +gggccagaagttggtatttacccaagcagccaaggctgctaaccctggtgcgattacagttcatgaagccca +gggcgcgacatttactgagactacaattatcgccacggcggacgctcgtgggctgattcagtcctccagggc +tcatgccattgtggctctaactcgccacacggagaagtgcgtggtagttgatgccccggggctcctccgtga +ggtgggtatttctgatgctattgttaataatttc------------------------------ttcctctc +tggcg--gcgagattggtccgcaccgtccgtcagttgtaccccgtggcactattagcagcaatgttgacac- +-----gcttgatgcatttcccccttcttgtcagtttagcgcataccatcaactggccgaagagcttggccac +cggcccgcgccgattgctgctgtcttgcccccctgcccagagcttgaacagggcttactttatatgcctcag +gaactaactacatcggacagtgtccttacctttgaactaacagacattgtgcactgccgtatggcggcaccc +agtcagcgtaaggcggtcctgtcaactcttgttggccggtacggccgccgcacaaagctgtacgaggccgcc +catacagatgtccgcgggtccctgaatcacttcattcctgagcttggccctataaacgttaccacctgcgag +ctctttgagcttgtagaggctatggtagagaaaggccaagatggctctgcagtcctggagctcgacctatgt +agccgtgatgtgtcacgaataaccttcttccagaaagactgtaataaatttacaacaggtgagacgatagcg +cacggtaaggtcgggcagggtatatctgcgtggagtaaaaccttctgcgctttatttggcccgtggtttcgc +gctattgaaaaagagatcctggcagcacttgcacccaacatcttctatggtgatgcctatgaggatacagtt +ttggccgctgccgttgcaggcgcccctggctgtaag---gtttttgagaatgacttttctgagtttgatagt +actcaaaataatttttcact------------------tgggcttgagtgtataattatggaggagtgtggt +atgccacaatggatggtgcggctttaccatcttgttcgctccgcctgggtcttgcaggccccgaaagagtcc +ttgcgcggcttctggaagaagcactctggtgaacctggcaccctgctgtggaataccgtctggaatatggcg +gttatagcgcactgctatgagttccgtgacctcagagttgcggcatttaaaggggatgattctgttgtgctc +tgcagcgattatcggcagagccgtaatgcggctgccttaatcgctgggtgtgggctgaagcttaaggtggat +tttaggcctattgggctgtatgctggtgttgttgttgctccgggtcttgggaccctccctgatgttgttagg +tttgccgggcggctttcagagaagaactggggaccgggcccggagagggcggagcagctccggctggccgtc +tgtgactttttgcgaaagttaacgaatgtggctcaggtttgcgtggatgttgtttcgcagg-------tcta +tggtgttagccctggtttggtacataacctgataggaatgcttcaaactattgcagatggcaaagcgcactt +tactgagacgatcaaacctgtccttgaccttacaaattctataatatatcgggtggaatgaataacatgttc +t----------------tttgctctttgcatggcg---------atgccaccatgcgctctcgggctcttct +gtttttgctcctcctgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gtcgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgcatctgacattccagcagccgccggggctggagctcgccctc +gacaaccggcccg---------------cccactcggctccgcttggcgtgaccagtccca----------- +------gcgccccgccgctcccgcccgtcgtcgatctacccca---------gctggggcttcgccgctgac +ggctgtggctccggcccctgatactgctccggtccctgatattgactcgcgtggtgctatattgcgccgtca +gtacaacctgtccacatccccactcacatccaccatcgccaccggcaccaatcttgtgctgtatgctgcccc +gcttagccctctactcccacttcaggatggcactaatactcatattatggctactgaggcttcaaattacgc +ccagtatcgtgtcgtccgcgccaccattcggtatcgccccctggtgccgaatgctgtcggtgggtatgctat +atctatttctttttggccccaaacaaccaccaccccgacgtccgtggatatgaattccatcacttctactga +tgtccgtattcttgttcaacccggtatagcttccgagctagtgattcccagtgagcgcttgcactatcgaaa +tcagggttggcgctcagttgagacctctggtgtcgctgaggaggaggctacttccggccttgttatgctctg +tattcatgggtcacctgtgaattcttacaccaatacaccttatactggtgctctcggcctgctcgattttgc +acttgagcttgagtttcgcaatttgacacctggtaatacaaacacgcgcgtctctcgttattcgagtagtgc +gcgccataagttgcgccgaggggccgacggcactgctgagctgactactactgctgctacacggtttatgaa +ggatctccacttta---cagggactaat---ggtgttggtgaggtgggccgtgggatagcgcttaccctgtt +taaccttgctgacacacttctcggcgggctcccgacagaactgatttcgtcggctggtggccaactgttcta +ttctcgccccgtcgtctcagccaatggcgagccgacagtgaaactctacacctcagtcgagaatgctcagca +ggacaaagggattgctatcccacatgatattgatctcggtgagtcccgagttgttatccaggactatgataa +ccaacacgagcaagaccgccctactccctcccctgcaccctctcgccccttttctgtgcttcgtgctaatga +tgtactttggctttc-----------------------------actcacggccgctgagtatgat------ +cagactacctatggctcttctaccaaccctatgtatgtttctgatactgtgacgttcgt---caatgtggct +accggtgcccagggggtttcgcgttccctggactggtctaaggtcactcttgatgggcgcccactaactact +at-----ccagcagtattctaagactttctatgtcc-tgcctcttcgtggtaagctttcgttttgggaggcg +ggtactactaaa--gccggctacccctacaattataatactactgctagtgaccagatcctgattgagaatg +cggccggccat------cgggtctgcat-ttctacttatactactaatttagg--------------ctctg +ggcctgtttctatttc-tgctgttggtgtcctcgcacctcattctgcactggctgttttggaggacactgtt +gact---------atcctgctcgtg----ctcacacttttgatgatttctgccctgagtgccgtgcgc---t +tggccttcagggttgtgccttccagtc--------tactgttgctgagttgcagcgtct------------- +--------taaaatgaaggtgggtaaaacccgggagtattgattta-tt----tc-gctt----------gt +gcct-tcc--------tt------ctgtc--tttc----ccttt--------------tatt-t-------t +tcttttct----gcg----------------ttccgcgctccctg---------------------gaagaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------aaaaaaaaaaa------------------- +------------------------------------------------------------------------ +----------- +>MH450020.1/17227/1-7227 |Hepeviridae isolate HEVBK001, complete genome +-------------------------------------------------------------------atgc- +---catggaggcccaccagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggttcggccgttcttatctcgcacccaaaccgagattct +tatcaatttgatgcaaccccggcagcttgtgttccgacctgaagtcctctggaaccatccgatccagcgagt +tatacataatgagctggagcagta---ctgccgagctc-gcgctggtcgctgcctagaggtgggtgcccacc +caagatctattaatgataaccccaatgtccttcaccggtgcttccttcgcccggttggaagagacgtccagc +gctggtactctgccccaactcgtggtcccgcagccaactgtcgccgttctgcactgcgcggtctacctcctg +tcgatcgcacatactgtttcgacgggttctcccgctgcgcctttgctgctgagaccgggatcgctttatact +cactgcatgacctttggccctcggacgttgcggaggctatggcccgccatgggatgacgcgcttgtatgctg +ccctccatcta-ccccctgaggttctgttaccacctggcacctaccacacaacctcctatcttttgattcac +gacggcaatcgtgccgtcgtgacttatgagggggatactagtgcgggttacaaccacgatgtgtctatactt +cgtgcatggatccgtaccaccaaaatagttggtgaccaccctttggtcatagagagggtccgcgccattggc +tgtcattttgtgctactcctcactgcagcccctgagccatccccratgccttatgtcccctaccctcgctca +acagaggtgtatgttagatctatatttggccctggt---------gggtcgccctctctgttcccgtcagcc +t----------gctctaccaaatcca-cattccacgctgtaccggtacatatttgggaccggctcatgcttt +ttggcgccaccttagatgatcaggccttctgctgctcgcggcttatgacctatctccgcgggattagctata +aagtgaccgttggcgctctcgtcgccaacgagggctggaatgcctcagaggatgcgcttaccgctgtgatta +ctgcagcgtatctgaccatttgtcatcagcgctatctacraacacaggccatttctaaaggtatgcgccgtt +tagaggttgagcatgcccaaaaatttatcacaaggttatatagctggctgtttgaaaaatc---------ag +gccgtgactacatccccggtcgtcagcttcagttttaygcacagtgccgccgttggctctcggccggctttc +atctggaccctagagttcttgtttttgacgaggcggtcccctgt---cgctgccggagttttttgaagaa-- +----ggttgccgggaagttctgctgctttatgaagtggttgggccagga------gtgcacctgttttctgg +----------------agccagcggaaggcctggttggtgactgtggc--------catgataacgaggcct +atgagggatccgaggtggaccctgctgagcccgcccaccttgatgtttccgggacctatgcagtccacggcc +gtcagcttgaggctctatatagagcgcttaatattcctgatgacattgtggcccgtgcgtcacgtctgacgg +ctactgtggaactcgctgccagcccaggccgactcgagtgtcgcacggtgcttgggaacaagacctttcgta +catcaataactgatggtgctcaccttgaggccaacggccc------------------------cgagcagt +acgtcttgacatttgatgactctcgccaggcaatgggggctgggccacacagtctcacgtatgagcttgtac +ccgccggcctgcaggttaaaatatcttct-------aatggcttggattgtaccgctacatttccc---ccc +ggtggggcgccaagcgctgcgccaggtgaggtggcggctttctgcagcgccctatataggtacaataggttc +acccagcgccattcgctgaccggtgggctgtggctgcaccccgaggggctcctcggcttgttcccccctttc +tccccggggcacctctgggagtctgcaaatcccttttgcggcgagagcacactttacacacggacttggtct +acatctggtttttctagtgacttctccccacccgaggcagctcatgtcgcctcagcccctgacgt----ggg +gctgccctcgggtaccccctcgtctgttggcgatgt-----------------ctgggtatt---------- +---------tccaccgcct----tccgaggggt--------------cggtaattgttccaccgcccgagac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttagtaagccagctaacccacctagt +cttactacacctagg-------------------------------------ccccctgtccgtaagccacc +cacactacc--------------------------------------accaattcgtactcgccggc----- +-------------------tcctttatacatatcccgatggggctaaggtgtatgcaggctctctgttcgag +tcagattgtgattggctggttaatgcatctaaccctggccaccgccctggtggcggcctttgtcacgcattt +taccagcgctttccggagtcgt------tccacccgaccgattttgttatgcgtgaggg---cctcgccgcg +tacactttgagcccgcgtccgatcattcatgctgtggcccctgactatagggttgagcagaaccctaagagg +ctggaggcggcataccgtgagacctgctctcgcctcggcacagctgcttacccgctattagggtcggggatt +taccaggtccctgtaggcttaagcttcratgcctgggagcgtaaccaccgcccaggcratraaytttacctt +actgagccagcagccgcc-------------------------------------------------tggtt +cgargctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccttaacaattactgaggacaccgc +cc------------gtacggctaatcttgcgcttgagattg------------actctgctactgaggtggg +tcgtgcttgc---gccggctgtactattaatcccgggattgtccattaccagttcaccgccggggttcccgg +ctccgggaagtctaggtctatacagcaaggggatgttgatgttgtggttgtgccaactcgtgagcttcgcaa +tagttggcgacgccgcggctttgctgctttcacaccccacactgcagctcgtgttactgccggccggcgtgt +ggtgatagatgaggcaccttcgctaccaccgcacttgctgttgctccatatgcagcgagcctcatcggtcca +tctycttggcgaccccaaccagatccctgctattgactttgagcatgccggcttggttccggcgattcgccc +cgagcttgcccccactagctggtggcacgtcacccatcgttgccccgccgatgtttgtgagctcatacgcgg +ggcttacccaaagatccagacgaccagccgcgtgttgcgatctttattctggaatgag------cctgcggt +gggccagaagctggttttcacgcaggctgccaaggcggccaaccccggtgcaattaccgttcatgaggccca +gggtgccacatttacagagactaccattatagccacggctgatgctaggggtcttattcaatcttctcgtgc +gcatgccatcgttgcacttactcgccatacagaaaaatgcgtcattctcgacgctcccggcctattgcgtga +ggtcggcatytctgacataattgttaataatttt------------------------------ttcctggc +tggcg--gtgaagttggccaccaccgcccttctatcataccccgcggcaacccagaccagaacttggacac- +-----tctacgggcgttccccccgtcctgtcaaattagtgcctatcatcagctggctgaggaactgggccat +cggccggccccagtggccgccgttctgcccccctgccctgaacttgagcaggggctactctatatgccgcag +gagcttacagtatccgatagtgtcctaatttttgaactcacagacatagtccactgtcgcatggccgcccct +agtcaacgcaaagcggtcctttcgacgctcgtcggtaggtacggccgccgaacgaagctgtacgaggcggcc +catgctgatgttcgcgagtctttagggaggtttatccctactattggacctgtccaggccactacgtgcgag +ctgtatgagctggttgaggccatggttgagaagggccaggatggctctgccgtgcttgagcttgacctctgc +agccgtgatgtctcgcgtatcacattcttccagaaagattgtaataaatttacaacaggtgagaccatcgcc +cacggcaaggtgggccagggcatatcggcctggagtaaaactttctgtgctttatttggcccgtggttccgt +gccattgagaaagagattctggctctgctcccacctaacgtcttctatggtgatgcctatgaggagtcagtg +ttttctgcagccgtctctggggctggctccagtatg---gtttttgaaaacgacttctctgagtttgatagt +acccaaaacaatttttctct------------------tggccttgagtgtgtcattatggaggagtgtggc +atgccccagtggcttatccgactgtatcatttagtcagatcagcttggaccctacaagccccaaaagagtct +ctgaaaggtttctggaagaagcactccggcgaacctggcactctcctttggaacaccgtctggaacatggcg +attattgcacactgctatgagttccgtgatttgagagtggcagcgtttaaaggggacgactctgtggttctt +tgcagtgattatcgtcagagccgcaacgcagccgccctgatagctggttgtgggttgaaattgaaggttgat +taccggcccataggtttgtacgccggcgttgttgtggctccgggtctcggagcactccctgatgttgtccgg +tttgccggtcggttatctgagaagaattggggccctggccccgagcgcgccgaacagttgcgcctagcggtt +tgtgattttctccgagggctgacraatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggcttgtgcataaccttattggtatgttacagaccattgctgatggaaaggcccactt +tactgagactgtcaagcctgtgctggatcttacaaattctatcatacagaggttggaatgaataacatgtt- +g----------------tgtgcatcgcccatggg------------ttcaccatgcgccctagggctgttct +gctgctgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaacccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgcctcccgtcgtcgatctgcccca---------actggggctgcgccgttaac +tgctgtttcaccagcacctgatacggccccagttcctgatgttgattctcgtggcgctatcttgcgccgcca +gtataatttgtctacctcccctttaacctcatctgttgcttctggaactaatcttgtcttgtacgccgcccc +tctcaacccccttctaccccttcaagacggcaccaatactcacattatggcgactgaggcgtctaattacgc +tcagtatcgggttgttcgggctacaatccgttatcgccctttggttccgaacgccgtcggtggttatgcaat +ttctatttccttctggcctcaractacaaccacaccaacctctgttgatatraactctattacttccactga +tgttaggattttggtccagcctggtatagcctcagaattggttatcccgagtgagcgcctccactatcgtaa +tcagggctggcgctcagttgaaacatcgggtgtggctgaggaggaggcgacatcaggtttggttatgctttg +tatccatgggtcccctgttaattcatataccaacacgccctataccggggcgttggggctccttgactttgc +actcraacttgaatttagaaatcttacccccgggaacactaacacccgtgtgtcccgttatactagcacggc +ccgacaccgtttgcgtcgtggtgccgatgggacagccgagcttacaaccactgcagccacacgttttatgaa +ggacttgcacttca---ccgggacaaat---ggtgtcggtgaggtgggccgtggcatagccctaactttatt +caatcttgctgacacacttctcggcgggttgccgacagaattgatttcgtcggctggaggccaactgttcta +ctcccgcccggttgtctcagccaatggcgagccggccgttaagttatatacctctgtcgagaatgcacagca +ggacaagggcatcgccataccacacgacatagatttaggggattcccgtgtggtaatacaagattatgacaa +ccaacatgaacaggatcggcctaccccatcgccggccccgtcccgccccttctcagtccttcgagctaatga +tgttctgtggctatc-----------------------------tttgactgcggctgaatatgat------ +cagaccacttacggctcgtcgaccaaccctatgtatgtttcagacactgtcacatttgt---taatgtggcg +acaggtgcccaggctgttgctcgttcccttgattggtctaaggtcactttggatggccggccactcactacc +at-----ccagcagtattctaagacattttatgttc-ttccgctccgtggcaagctttccttttgggaggct +ggtacgactaag--gctggttacccttataattataacactactgctagtgaccarattttgatcgagaatg +cagccggtcat------cgtgttgctat-atctacttacactaccagcctcgg--------------tgccg +gccctgtgtcagtttc-tgcggtcggcgttcttgcaccgcactctgctctagctgtgcttgaggacactatt +gact---------atcctgctcgtg----ctcatacttttgatgatttctgccctgagtgccgtaatc---t +cggcctgcagggctgcgcttttcagtc--------tactattgctgaacttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----c---ctc-ttt------gt +gccc-cct--------tc-taaa-ct-tt----gc-tc-tgt----------------tatt-t-------c +ttttttct----gcg----------------tttcgcgctccctg---------------------ggaaaa +aaaacca---------------aaaaaaa------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH450021.1/17224/1-7224 |Hepeviridae isolate HEVCU634, complete genome +---------------------------------ccc-tggctg-------------c-----cttcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +cgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttgtcccgtgtgcaaactgagattct +tattaatttaatgcaaccccgacagctggttttccgacctgaagtgctttggaatcatccaatccaacgggt +tattcataatgaattagaacagta---ctgtcgggccc-gggctggccgttgtctagaagttggggcccacc +caagatccatcaatgacaacccgaatgttttgcatcggtgctttctacgaccagtcggaagggacgttcagc +gctggtattctgcccctacccgtggccctgcggctaattgtcgccgctctgctttgcgtggccttcctcctg +ttgatcgtacctactgttttgacgggttctcccgctgctcgtttgctgcagagactggggtggctctctact +ctttgcatgacctctggccggccgatgttgcggaggccatggcccgacacgggatgacacgcttatatgctg +cactacatctt-cctcctgaagtactactaccgccaggcacataccacacaacatcatatcttttgatccac +gacggcgatcgtgctgttgtgacttatgaaggtgacactagtgcaggctacaaccatgatgtttccatactc +cgcgcatggatccgtacaactaaaatagttggcgaccatccgctggtgatagagcgtgtgagggctattggc +tgccactttgtgctgttgcttactgcagcccctgagccgtcaccaatgccttatgtcccatatccccggtcg +acagaggtgtatgtccgctctatattcggccctggc---------gggtccccatcccttttcccatcagct +t----------gctctacaaagtcca-catttcatgctgtcccagtccatatttgggaccggctcatgctct +tcggcgctaccctagatgatcaggcgttctgttgctcacggcttatgacctacctccgtgggattagctaca +aggtcactgtcggcgccctcgttgctaatgaggggtggaatgcttcggaggacgcccttaccgctgttatta +ctgcggcgtatttgaccatttgccatcaacgctacctccgtactcaggctatatctaagggtatgcgccgac +ttgaggttgagcatgctcaaaaatttattacaagactttacagttggctgtttgagaagtc---------tg +gccgtgactacatccccggccgtcagcttcagttctatgcacagtgtcgccgctggttatcggcgggtttcc +accttgacccaagggtgcttgtttttgatgagtctgtgccctgc---cgttgcaggacgttccttaagag-- +----ggttgcaggtaaattctgttgttttatgaagtggcttggacagga------gtgtacctgctttctgg +----------------aaccagcagagggcctggttggcgaccacggc--------catgataatgaggcct +atgagggctctgaggtcgaccaggctgaacccgcctatctagatgtttccgggacctatgccgtccatggac +gccaacttgaggccttgtatagggcgcttaacatcccgcatgacatcgcagctcgagcctcccgtttaaccg +ccactgttgagctcgttgcaagcccagaccgcttggagtgtcgcaccgtgctcgggaataagactttccgaa +caacggtggttgatggcgcccatcttgaggcgaacggccc------------------------cgagcagt +acgtcctttcgtttgacgcctcccgtcagtctatgggtgccgggtcgcatagcctcacttatgagctcaccc +ctgctggcttgcaggttaggatttcatct-------aatggtctggattgtactgcgacattcccc---cca +ggcggggcccctagcgccgctccgggggaggtagcagctttctgcagtgccctctacaggtataataggttc +acccagcggcattcgcttacgggcggcttgtggctgcaccctgaggggttattgggtatcttcccccctttt +tcccccgggcatctctgggagtccgctaatcctttttgcggggagggaaccttgtacactcggacttggtca +acatctggtttttctagtgatttttccccccccgaagcagctgccgctgcgccggctgatgttcc----ggg +gttatccc---accctacaccccctgttagtgatat-----------------ctgggtgtt---------- +---------accgccaccc----tccgaagaac--------------ttcaggttgatgcagtgcctacccc +tccag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccccgagcctgtcccactacccaac +cccgtcgagccaggg-------------------------------------gtccccgtgcgtaagccggc +ggcaccacc--------------------------------------acctccgcgcacccgccggc----- +-------------------ttctttacacttacccggacggggcaaaggtgtacgcggggtcattgtttgag +tctgactgtgactggttggttaacgcctcaaaccctggtcatcgtcccggagggggcctttgtcacgccttt +taccaacgctaccccgagtctt------tctattggactgagttcattatgcgcgacgg---tcttgccgcg +tacactttaaccccccggcctatcattcatgcagtagcccctgattatcgggttgagcagaacccaaagagg +cttgaggcagcatatcgagagacttgttcccgccgtggtactgccgcctacccgctccttggttcgggcata +taccaagttccggttagcctcagctttgacgcctgggagcgtaaccatcgccctggggacgagctttacctg +actgacctcgccgctacc-------------------------------------------------tggtt +cgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------gccggccctcacaataactgaggatacagc +cc------------gcacggccaacctagcattggagatcg------------atgctgctactgaggttgg +tcgggcttgt---gccggctgtacagttagtcctgggattatacattatcaatttactgccggagtaccggg +ttcggggaagtcgcggtctatacagcagggggatgtcgatgtggtggttgttcccactcgagagctccggaa +cagctggcgccgccggggttttgcagcttttacacctcacacggcggcccgtgtcaccacgggccgtcgcgt +tgtgattgatgaagccccttctctcccgccgcacttgctgctactacacatgcagcgggcctcgtcggtcca +tcttcttggcgacccaaatcagatccctgctatagacttcgagcatgccggcctggtccccgcaatacgccc +tgagctcgcacctaccagctggtggcatgttacccatcgttgccccgccgatgtgtgtgagcttatacgcgg +ggcctaccctaaaatccagactaccagccgcgtgttgcggtcattattctggaatgaa------cccgctat +tgtccagaagcttgtcttcacgcaggctgctaaggctgccaaccctggtgcgattacagtccatgaggccca +aggtgccacttttacggagaccacaatcatagccacagctgatgctagggggctcattcagtcttcccgggc +ccacgctatagtcgcactcacccgccatacagagaagtgtgttattcttgacgcccccggtttgctacgaga +agttggtatctcggatataattgttaacaatttt------------------------------ttcctcgc +tggcg--gggaagtgggccaccaccgcccctctgtgatacctcgcggtagccctgaccagaacctcgctac- +-----actacaggcctttccaccttcctgtcagataagtgcttatcatcagttagctgaggaactaggccac +cgcccagcccccgtagctgccgttctgcccccttgcccagagcttgagcagggcttgctgtatatgccgcaa +gagctcacggtgtctgatagcgtgttgatctttgaactcacggacatagtccactgccggatggccgcccct +agccagcggaaggccgtcctatcgacgcttgtgggtaggtacggccgtaggacaaagctgtacgaagcagct +cactctgacgtccgtgagtccctcgctaggttcattcccaccattgggcccgttcaggctactacgtgtgag +ctatatgagctggttgaggccatggtggagaagggtcaggatggttctgccgtgcttgagctcgacctttgc +aatcgtgatgtatcgcgtatcacatttttccagaaagattgtaacaagttcacaacaggtgagaccattgcc +cacggcaaagtcggtcagggcatctctgcttggagtaagaccttctgtgccctgtttggcccgtggttccgt +gctattgaaaaagaaatactggccctgctcccgcccaatatcttttatggcgacgcgtatgaggagtctgtg +tttgctgctgccgtgtccggggcaggttcatccatg---gtatttgagaatgacttttcagagtttgatagc +actcaaaataacttttctct------------------tggtctcgagtgtgtagttatggaggaatgtggt +atgccccagtggctaatccggttgtaccatttggttcggtcggcctggatcttacaggcgccgaaggagtct +ctcaagggattctggaagaagcattctggtgagcccggcaccctcctttggaataccgtttggaatatggcg +atcatagcacactgctatgaattccgcgattttagggtcgccgctttcaagggagatgattcggtggttctc +tgcagcgactaccgtcagagccgcaatgcagcggctctgattgcaggttgcgggctcaaactgaaggttgat +taccgccctatcgggttgtatgctggtgtagtggtggcccccggtttggggacgctacccgacgtagtgcgt +tttgcaggccggctgtctgagaagaactggggccctggaccggagcgggctgagcagttgcgccttgctgtt +tgtgacttccttcgagggttgacgaatgttgcgcaggtatgtgttgatgtcgtatcccgag-------ttta +tggagttagccctgggctggtacataacctcattggtatgttgcaaaccattgccgacggcaaggctcacyt +tacagagactgttaaacctgtgcttgaccttactaactcaattacacagcgggtggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagccctttg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtttcgcaatccggggctggagctcgccctc +gacagccactccg---------------ccccctcggctcctcctggcgtgaccagtccca----------- +------gcgcccccccgctgccccacgccgtcgatctgcccca---------actggggctgcgccgctgac +agccacatcacccgcccctgataccgctcctgtacctgatgttgattcgcgcggcgctatattgcggcgcca +gtataatctatctacatctccactcacgtcatctgttgcttcgggtactaatctggttctttatgctgcccc +gttaaaccctctgttgccccttcaagatggcactaacactcatattatggccactgaggcatccaactatgc +ccagtatcgggttgtccgagccacgatccgttataggccattggtgccaaatgctgttggtggctacgcaat +atccatttcattctggccccagactactactacccccacgtctgttgatatgaattctatcacctctactga +tgtccggattctagtccagcctggtattgcttccgagttagttatccctagtgagcgcctccattatcgtaa +ccagggctggcgctctgtagagacctcgggtgtggcagaggaggaggccacctccggtttggtgatgctctg +tatccacggctcccctgtcaactcttacaccaacaccccctacaccggggcacttggacttcttgactttgc +tttagagcttgagtttaggaatttgacacccgggaacaccaacacccgagtttcccggtacacaagcacagc +ccgtcaccggctgcgccgcggtgctgatggcaccgccgagcttaccaccacagcggctacacgttttatgaa +ggacctgcatttta---ccggcacgaac---ggggtcggcgaggtgggccgtggtattgctctcacactctt +taatcttgctgacacacttctcggtggtctgccgacagaattratttcgtcggctgggggacagttgtttta +ctcccgccccgtcgtctcagccaatggcgagccgactgtcaagctatatacatctgtagagaatgcgcagca +ggataaagggattgccatcccacatgatatagacctgggtgactcccgtgtggtcattcaggactatgataa +tcagcatgagcaagatcggcccaccccttcgcctgccccatctcgtccgttctcagtccttcgtactaatga +tgttctatggctctc-----------------------------tctcaccgctgctgaatatgat------ +cagactacatatgggtcgtccaccaacccgatgtatgtctcggatactgtcacatttgt---caacgtggct +acaggggcccaggcggtcgcccgctcccttgactggtctaaggttactttggatggccgtccccttactacc +at-----ccagcagtactctaaaacattttatgtcc-tcccgcttcgcgggaagttgtccttctgggaggcc +gggacaactaag--gctggttacccctataattataatacaactgctagtgaccagattttgattgaaaatg +cagctggtcac------cgtgttgctat-ctccacctataccaccagcctggg--------------tgccg +gtcctgtgtcagtttc-tgcagtcggtgtattagccccacattcggctcttgcagttctcgaggatactatc +gatt---------accctgcccgcg----ctcatacttttgatgatttttgcccggagtgtcgcgccc---t +tggtctgcaggggtgtgccttccagtc--------tactattgctgaacttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattaa-tt----t--cctt---t------gt +gccc-cct--------tc-atag-cttc-----tg-ct---t----------------tatt-t-------c +ttttttct----gc----------------gtttccgcctccctg---------------------gaaaaa +aa---------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH450022.1/17270/1-7270 |Hepeviridae isolate HEVCU644, complete genome +--------------------------ccttccaccc-cgtatg-------------t-----cttcgatgc- +---catggaggcccatcagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatctcgcatacaaaccgagattct +tattaatttgatgcaaccccggcagttggttttccgccctgaggtgctttggaatcatcctattcaacgggt +tatacacaatgaattagaacaata---ctgccgggccc-gggctggtcgctgcttggaggttggagctcacc +cgagatctattaatgacaaccccaacgtcttgcaccggtgctttcttagaccggtcggccgagatgtccagc +gctggtaytctgcccccacccgtggccctgcagccaattgtcgccgctccgcgctgcgcggcctccctcctg +ctgaycgcacttaytgytttgatggattttcccgatgtgcttttgctgcagaaaccggtgtggccctttact +ctctgcatgacctctggccagctgatgttgcrgaggccatggcccgccatggaatgacacgcctgtatgccg +cactgcacctc-ccccccgaggtgctgctcccgcccggcacctatcacacaacctcgtatctcctgattcac +gacggcaatcgtgctgttgtaacttacragggtgatacragtgcaggttacaatcatgatgtttccatactt +cgtgcgtggatccgtacaactaaaatagttggtgaccacccgctggttatagagcgtgtgcgggccattggg +tgtcattttgtgcttctgctcaccgcagcccctgagccgtcacctatgccttatgtcccctacccycgctca +acagaggtgtacgtccgatctatattyggccctggt---------ggctcyccttccttgtttccgtcggcc +t----------gctctactaaatcca-cttttcatgctgtcccggttcatatctgggatcggctcatgctct +ttggtgcyaccctggatgatcaggcgttytgctgttcacggctcatgacttacctccgtggyattagctaca +aggtcactgtcggtgcgcttgtygcyaaygagggktggaacgcctctgaagatgctcttactgcagtgatca +ctgcggcttatttgactatttgccaccarcgttatcttcgcacccaggcgatctccaagggtatgcgccggy +tggaggttgagcacgcccagaaatttattacaagrttatatagttggctatttgagaagtc---------tg +gccgtgattacatccctggccgccaacttcagttttatgcacagtgccgrcggtggctatctgcaggtttcc +acctagaccctagggtgcttgtctttgatgaatcagtgccgtgc---cgctgtaggacttttttgaagaa-- +----agtcgcaggtaaattctgctgttttatgcggtggctggggcagga------gtgcacttgtttcctgg +----------------aaccagctgagggtttaattggtgaccaaggc--------cacgataacgaggcct +atgagggttctgaggtcgacccggctgagcctgcgcatcttgatgtttcggggacctacgccgttcatgggc +gtcagcttgaggccctctatagggcacttaatgtcccacatgatattgctgctcgagcttcccgactaacgg +ctactgttgagctcgttgcaagcccagaccgcctagagtgccgcactgtactcggtaataagaccttccgga +cgacggtggtcgatggtgcccatcttgaggcgaatggccc------------------------tgagcagt +atgtcctatcatttgatgcttcccgtcagaccatgggggctgggtcgcacagcctcacatacaagcttaccc +ccgccggtttgcaggttaagatttcatct-------aatggcctggattgyacygctacattcccc---ccc +ggyggcgcccctagtgccgcgccgggggaggtggctgccttttgcagtgccctttacaggtataacaggttt +acgcagcggcattcgctgaccggcgggttatggctacaccctgaggggttactgggcatcttcccccctttt +tcccctgggcatatttgggagtctgctaaccctttctgtggggaaggaactttgtatacccgaacctggtca +acatctggcttttctagcgatttttccccccctgaggcggccgttcccgccccggctgctgtccc----gga +gccgcccc---atcttactccacctgttagtgatat-----------------tcgggtgtt---------- +---------actaccgccc----tcagaggagy--------------ctcgggttgacgcagcatctgagcc +ccccg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tctctgagcctgctggactgtccagc +cctattgtgcttaccc-------------------cctcccctcccccccctccccttgtgcgtaagccatc +aataacccc--------------------------------------tccctcccgcactcgccgtc----- +-------------------tcctctatacctatcccgacggcgctaaagtttatgcggggtctttgttcgaa +tcagactgtgactggttggtcaacgcttctaacccgggccatcgtcccggaggtggcatttgccacgctttt +tatcagcgtttcccggaggcgt------tttactggactggatttatcatgcgtgaggg---ccttgcggca +tatactttaactccgcgccctatcattcacgcagtggctcccgactatagggtcgagcagaacccaaagagg +cttgaggcagcgtatcgggaaacttgytcccgccgtggcaccgctgcctacccgcttttaggctcgggtata +tatcaagttcctgctagccttagctttgatgcctgggaacggaatcaccgccccggygatgagctctacctg +actgagcctgctgcagcc-------------------------------------------------tggtt +tgaggctaataagccggcgca--------------------------------------------------- +------------------------------------------gccggcgctcactataactgaggacacggc +tc------------gtacggccaacctggcactagagatcg------------atgccgccacagaggttgg +acgtgcttgt---gccggctgcactatcagccctggcattgtgcactaccagtttaccgccggggtcccggg +ttcgggcaagtcaaggtctatacaacagggggatgttgatgtggtggtcgtgcccacccgcgagctccgtaa +tagttggcgccgccgaggtttcgcagctttcacacctcacacagcggcccgcgttaccattggccgccgcgt +tgtgattgatgaggctccatctctcccgccacatctgttgctgctacatatgcagcgggcctcctcggtcca +tctcctcggtgacccaaaccagatccctgctatcgattttgaacatgccggcttggttcccgcgatccgccc +cgagctagcaccaacgagctggtggcacgtcacacaccgctgcccggctgatgtgtgcgagttaatacgtgg +agcttaccctaaaatccagaccacgagccgtgtgctacggtccctgttctggaatgag------ccggctat +tggccagaagttggtttttacgcaggctgctaaggctgctaaccctggtgcaattacagttcatgaagctca +gggtgccaccttcacagagaccacaattatcgctacagctgatgccaggggccttatccagtcgtcccgggc +tcatgctatagttgcacttacccgccacactgagaagtgygttattctggatgcccccggcctgctgcgtga +ggtcggcatttctgatgtgattgttaataacttt------------------------------ttcctcgc +tggtg--gagaggttggccaccaccgcccatctgtgataccccgtggtaatcctgatcaraacctcgggac- +-----tcttcaagccttcccgccgtcttgccaaattagtgcctaccatcagttggctgaggaattaggtcat +cgcccggcccctgtcgccgctgtcttgcccccttgccctgagcttgagcagggcctgctctatatgccgcaa +gagcttactgtgtctgatagtgtgttggtttttgagcttacggatatagtccattgccgtatggccgcccca +agccagcgaaaggctgttctttcaacacttgtggggaggtatggccgtaagacgaagctgtatgaggcagcg +cactctaatgttcgcgagtctctagccaggttcrtccccactatcggacctgttcaggtcaccacatgtgaa +ttgtatgagctggttgaagctatggtggagaagggccaggacggctctgccgttctggagcttgatctttgc +aatcgtgatgtttcgcgcatcacatttttccagaaggattgcaacaagttcacaactggtgagactatcgcc +catggtaaggttggccagggtatatcggcctggagtaagaccttctgtgccctgtttggcccgtggttccgt +gccattgaaaaagaaatactggctctgctcccgcctaatatcttttatggcgacgcctatgaggaatcggtt +ttcgctgccgctgtttccggggcggggtcatgtatg---gtatttgaaaatgacttctctgagttcgacagt +acccagaataatttctctct------------------cggccttgagtgtgtggtcatggaggagtgcggc +atgccccagtggttaatccggttgtaccatctggttcggtcagcctggatcctacaggcgccgaaggagtct +cttaagggtttctggaagaagcactctggtgagcccggcacccttctttggaacaccgtctggaacatggca +attatagcacattgctatgagttccgtgaccttcgtgttgccgccttcaagggtgatgattcggtggtcctt +tgtagcgactaccggcagagccgcaatgcggctgccttaattgcaggttgtgggcttaaattgaaggttgac +taccgccctattgggctgtatgctggggtggtggtggccccaggcytggggacattgcctgatgtggtgcgt +tttgctggtcggttgtctgaaaagaattggggccccggcccggaacgtgctgagcagctgcgtcttgctgtt +tgtgattttctccgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------tcta +tggagttagccccgggctggtacataacctaattggcatgctgcagaccattgccgatggcaaggcccactt +tacagagactgttaaacctgtgcttgaccttacaaattctattatacagcgggtggaatgaataacatgtc- +t----------------tttgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gttgttgttcctcatgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gtcgtcgtgggcg-gcgcagcggcggtac +cagcggtg-gtttctggggtgacagg--gttgattcccagcccttcg----ccctcccctatattcat---- +--------------ccaaccaatcccttcgccgccgatgtcgtatcacaacccggggctggagctcgccctc +gacaaccgccccg---------------cccccttggctccgcttggcgcgaccagtccca----------- +------gcgcccccccgctacctcccgtcgtcgatcttcccca---------gctggggctgcgccgttgac +tgctacatcaccagcccccgacacagcccctgtacctgatgttgattcacgtggtgctattctgcgccggca +atataatttgtccacgtccccgcttacgtcatctgttgcctcgggtactaatttggttctttatgctgcccc +gctgaatcctcttctacctcttcaggatggcaccaacactcatattatggctactgaggcgtccaactatgc +ccagtatcgggttgttcgggcyacgatccgttatcgccccttggtgccaaatgctgttggtggttatgctat +ttctatctctttctggcctcaraccacaaccacccctacctctgttgatatgaattctatcacttccaccga +tgtaaggattttggttcagcccggtattgcctccragttggtaatccctagtgagcgccttcaytaccgtaa +tcaaggctggcgctctgttgagaccacgggygtggctgaggaggaggctacttccggtctggtaatgctttg +cattcacggctctcctgttaattcctatactaatacaccttacactggtgcactggggctccttgattttgc +gctagagcttgaatttagaaatttgacacctgggaacacyaacacccgtgtttctcgatataccagcacagc +ccgccaccggctgcgccgtggcgctgatgggaccgctgagcttactaccacagcagccacacgctttatgaa +ggatctgcatttta---ctggtacgaat---ggcgtaggtgaggtcggtcgtggtatcgccctgacactgtt +yaatcttgctgatacgcttcttggyggtttaccgacagaattgatttcgtcggctgggggtcaactgtttta +ttcccgccctgttgtctcggccaatggcgagccarcagtaaagttatatacatctgttgagaatgcgcagca +agacaagggcatcaccatcccgcacgacatagatctgggtgattcccgtgtggtyattcaggactacgacaa +ccagcatgagcaggatcgacccactccgtcacctgctccctcycgccctttctcagttcttcgtgctaatga +tgttttgtggctctc-----------------------------cctcactgccgctgaatatgac------ +cagactacrtatgggtcgtccaccaaccctatgtatgtctctgacacagttacgcttgt---caatgtggct +accggcgctcaggctgttgcccgctctcttgaytggtccaaagttactctggatggccgcccccttactacc +at-----ccagcagtattccaagacattttatgttc-tcccgctccgcgggaagctgtccttttgggaggcc +ggtacgattaag--gccggctacccttacarttatgataccactgctagtgatcaaattctaattgagaatg +cggccggtcac------cgtgtcgctat-ttctacttataccactagcttggg--------------cgccg +gccctacctcgatttc-tgcggtcggtgtactagctccgcactcggctcttgctgttcttgaggataccgtt +gatt---------atcccgctcgtg----cccacactttcgatgatttctgtccggagtgccgtaccc---t +cggtctgcagggttgtgcatttcagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattaa-tt----c--t--t-ctt------gt +gccc-cct--------tc-gtag-ctctctttggt-tt--------------------tatt-t-------c +ttatttct----gc----------------gtttcgcgctccctg---------------------ggaaaa +aaaccaa---------------aacccaataa---------------------------------------- +------------------------------------------aa---------------------------- +------------------------------------------------------------------------ +----------- +>MH450028.1/17215/1-7215 |Hepeviridae isolate HEVGB31, complete genome +---------------------------------------------------------------ttcgatgc- +---catggaggcccaccagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgttcttatcccgtgttcaaactgagatcct +tatcaatttgatgcaaccccggcagcttgtgttccgacctgaagtcttctggaatcacccgatccagcgagt +tatacacaatgagctggagcaata---ctgccgagccc-gtgctggccgttgtcttgaggtgggcgctcacc +caagatctatcaatgataatcccaatgttttgcaccggtgcttccttcgcccggttggtagagacgtccagc +gctggtattccgcccctactcgtggtcccgcggccaattgccgccgctccgcactacgtggtttgcctcctg +tcgaccgcacatactgcttcgacgggttctcccgctgcgcctttgccgccgagaccgggattgctctatact +cgctgcatgacctttggccctcggatgttgcggaggctatggcccgccatgggatgacgcgcctgtacgctg +tcctccattta-ccccctgaggtcttgttaccacctggcacttaccatacaacctcttatcttttgattcat +gacggcaatcgtgccgtcgtgacttacgagggggatactagcgcgggctataaccatgatgtgtccatactt +cgtgcctggatccgcaccactaaaatagttggcgaccacccattggtaatagagagggtccgtgccattggc +tgtcattttgtattactgcttactgcagcccccgagccatccccgatgccttatgtyccytaccctcgttca +acagaggtgtatgtcagatcaatatttggccctggt---------gggtcaccttctctttttccatcagcc +t----------gctccaccaaatcta-cattccatgctgtaccagttcatatttgggaccggctcatgcttt +ttggtgccaccttagatgaccaggccttttgctgctcgcggcttatgacctatctccgcgggattagctata +aagtgaccgttggtgcactcgtcgccaacgagggytggaatgcatcggaggatgcgcttactgccgtgatta +ctgcagcgtatttgactatttgccaccagcgctacctacgaacacaggccatctctaaaggcatgcgccgtt +tagaggttgaacatgcccagaaatttatcacaaggctatacagctggctgtttgagaaatc---------ag +gccgtgattatatccctggtcgccagctycagttttatgcacagtgccgccgttggctctcggccggctttc +atcttgaccctagagttctggtttttgacgaggcggtcccttgc---cgctgccggagcttcctaaagaa-- +----ggttgccggaaaattttgttgttttatgaaatggttggggcaaga------gtgcacctgttttctgg +----------------agccagcggaaggccttgttggcgactgtggc--------catgacaacgaggcct +atgaagggtccgaggtggaccccgccgagcccgttcaccttgatgtttccgggacctacgcggtccacggcc +gtcagctcgaggctctgtatagagcgcttaatatccctgacgacattgcggctcgcgcgtcacgcctgacgg +ctactgtggaactcgccgccagcccaggccgactagagtgccgcactgtgcttgggaataaaacctttcgta +catcaataactgatggtgctcacctcgaagccaacggccc------------------------tgagcagt +atgtcttgacattcgatgactctcgccaggcaatgggggctgggccccacagtcttacgtatgaacttgttc +ctgccggtctgcaggtcaaaatatcttct-------aatggtctggattgtaccgctatattcccc---ccc +ggtggggcgccaagcgccgcgccaagtgaagtggcggctttctgcagcgccctttacaggtacaataggttt +acccaacgccattctttgaccggtgggctgtggttacaccctgaggggctccttggcctgttcccccctttt +tctcccgggcacctctgggagtctgcgaaccctttttgcggtgagagcacactctacacacgtacttggtct +acttctggcttttctagcgacttttctccacccgaggcggtccatgctgtcccagtccctgacat----ggg +gctaccctcaggtaccccctcgtctgctggcagtgt-----------------ctgggtact---------- +---------cccaccaccc----tccgaggggt--------------cggtaattgctccaccgcctgaaac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttagtaagctagctaacttgcctagt +catactacacctagg-------------------------------------ccccccgtccgtaagtcgcc +cgtaccacc--------------------------------------accgacccgcacccgccggc----- +-------------------tcctttatacataccctgatggggccaaggtgtatgcgggctctttgtttgag +tctgattgtgattggctggttaatgcatctaaccctggtcaccgccccggcggtggtctttgtcacgcattt +taccaacgttttccggagtcgt------tccacccgaccgatttcgttatgcgtgaagg---tctcgccgca +tacactttgagcccgcgcccgatcattcatgctgtggcccccgactacagggttgagcagaaccccaagagg +ctagaggcggcatatcgtgagacctgttcccgcctcggcacagctgcttacccgttactggggtcggggatt +taccaggtccctgtaggtttaagcttcgacgcctgggagcgtaaccaccgcccaggtgatgagctttacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccggccctaacaattactgaggatactgc +cc------------gcacagctaacctcgcgctcgagattg------------actccgctactgaggtggg +tcgtgcctgt---gccggctgtaccattaaccccgggattgttcattaccaatttaccgccggggttcctgg +ctccggaaagtctaggtctatacagcagggggacgttgatgttgtggttgtgccaactcgtgagcttcgtaa +tagctggcggcgacgcggctttgctgcttttacaccccacacagcggcccgtgtcactgccggccggcgtgt +ggtgatagacgaggcaccttctctaccaccgcacctattgttgctccatatgcagcgagcctcatcggtcca +tcttcttggtgatcctaatcagatccctgctattgactttgagcacgcaggtttggttccagcgattcgccc +tgagcttgcccctactagctggtggcatgtcacccatcgctgccccgccgacgtctgtgagctcatacgcgg +agcttatccgaagatccagacgaccagccgtgtgttgcgatcattattctggaatgag------cctgcggt +gggccagaaactggtttttacgcaagcagctaaggcggccaaccccggtgcaatcaccgttcatgaggctca +gggcgccacgtttacggagactaccatcatagctacggctgatgctaggggtcttattcaatcctctcgtgc +acatgctatcgttgcactcacccgccatacagaaaaatgtgtcattcttgacgcccctggcctactgcgtga +ggtcggcatttctgacacaattgttaataatttc------------------------------tttctggc +tggcg--gtgaagtgggccaccatcgcccttctatcataccccgtggcaatcctgaccagaacttagacac- +-----cctgcgagcgttccctccgtcctgccagattagcgcctaccatcagttggctgaggagctgggccac +cggccagccccagtggccgccgtcctgcccccctgccctgagcttgagcagggtctactctacatgccacag +gagcttacagtatccgatagcattctaacttttgaactcacggacatagtccattgtcgtatggctgccccc +agtcaacgtaaggcggtcctttcgacgctcgtcggcaggtatggccgccgaacgaagctgtacgaagctgtt +cattctgatgttcgtgagtccctagggaggtttatccctactatcgggccagttcaagctaccacgtgcgag +ctatatgagttggttgaggctatggttgagaagggccaggacggctccgccgtgcttgagcttgacctctgc +agccgtgatgtctcgcgtattacattcttccagaaggattgtaacaaatttacaacaggtgagaccattgcc +catggcaaggtgggccagggcatatcggcttggagtaaaaccttctgtgctttgtttggcccgtggttccgt +gccattgagaaggagatcctagctctgctcccacccaatgtcttttacggtgatgcctatgaggagtcagtg +ttatctgcggccattgctggagccggctccagtatg---gtctttgagaacgacttctccgagtttgatagt +actcagaacaatttttctct------------------tggccttgagtgcgccattatggaggagtgtggc +atgccccagtggcttatccgattgtatcatttggtcagatcagcctggaccctgcaagccccgaaagaatct +ttgaaaggcttttggaagaagcattccggcgagcctggcactctcctttggaacaccgtctggaacatggcg +atcatagcacactgctatgaattccgtgacctgagagtggcagcgtttaaaggggatgattcggtggttctt +tgtagtgattaccgtcagagccgcaatgcagccaccctgatagccggctgtgggttgaaattgaaggttgat +taccggcctataggcttgtatgccggcgttgtcgtggccccgggcctaggcgcacttcctgatgttgtccgg +tttgccggccggttatccgagaagaattggggcccgggccccgagcgtgccgaacagctgcgcctagcggtc +tgtgatttcctccgaaggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacagaccattgctgatggaaaggcccattt +tactgagactgttaagcccgtgttggatcttacaaattctattatacagaggctagaatgaataacatgtt- +c----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaacccggggctggagctcgccctc +gacagccggcccg---------------tcccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgcctcccgtcgtcgatctgcccca---------actggggctgcgccgctaac +tgctgtatcaccagcgcctgatacggccccagttcctgatgttgactctcgtggcgctatcttgcgccgtca +gtataacctgtccacttcccctttaacttcgtctgttgcctctgggactaatcttgtcttgtatgccgcccc +gcttaatccccttctgcccctccaagacggcaccaatactcacattatggcgactgaggcgtctaattacgc +ccagtatcgggttgtccgggctacaatccgttatcgccctttggtcccgaatgccgtcggtggttatgcaat +ttctatctctttctggcctcagactacaactacacctacttctgttgatatgaattccattacctctactga +tgttaggattttagttcagcctggcatagcctctgagttggtcatcccgagtgagcgcctccactatcgcaa +tcaaggttggcgctcagttgagacatcgggtgtggccgaggaggaggcaacatcaggcttggttatgctttg +tatccatggctcccctgttaattcttataccaacacgccctacactggggcattggggctcctcgacttcgc +acttgagcttgaatttagaaatctgacccccgggaacactaacacccgtgtgtcccgttacactagtacagc +ccgacaccgtttgcgtcgtggtgccgatgggacagccgaacttacaaccactgcagccacacgttttatgaa +ggacttgcatttta---ccgggacaaac---ggtgttggtgaagtgggccgtggcatagccctaacactatt +taatcttgctgatacgcttcttggcgggttgccgacagaattgatttcgtcggctggaggccaactgttcta +ctcccgcccggtcgtctcagccaatggcgagccgactgttaagttatacacctccgtcgagaatgcacagca +ggacaagggcattgctataccacacgatatagacttaggggattctcgtgtggttatacaggactatgacaa +tcaacatgaacaggaccggcccaccccgtcaccagccccgtcccgccccttctcagtccttcgggccaatga +tgtcctatggctgtc-----------------------------attgactgcggctgaatatgat------ +cagaccacctatggctcgtcgactaatcctatgtatgtttctgatactgtcacatttgt---caatgtggcg +acaggtgctcaggctgttgcccgttcccttgattggtctaaggtcactttggacggccggccactcaccacc +at-----ccagcagtattctaagacattctatgtgc-tgccgcttcgtggcaagctttctttttgggaagct +ggcacgactaag--gccggttacccctataattataatactactgctagtgaccaaatcttgattgagaatg +cagctggtcat------cgtgttgctat-atccacttatactactagtcttgg--------------tgccg +gtcctgtatcgatatc-agcggtcggcgttcttgcgccgcactctgctttagctgtgcttgaagatactatt +gatt---------atcctgcccgtg----cccatacttttgatgatttctgccctgagtgccgcaatc---t +cggcttgcagggctgcgctttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----t--ccct-ttt------gt +gccc-cct--------tc-taga-tt-tt----gc-cc-tgt----------------tatt-t-------c +ttttttct----gcg----------------tttcgcgctccctg---------------------gaa--- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH450031.1/17215/1-7215 |Hepeviridae isolate HEVGB166, complete genome +---------------------------------------------------------------ttcgatgc- +---catggaggcccaccagtttattaaggctcctggcatcactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgttcctatcccgtgttcagactgagattct +catcaatttgatgcaaccccggcagcttgtgttccgacctgaggtcctctggaaccacccgatccagcgagt +catacataatgagctggagcagta---ctgtcgggccc-gcgctggtcgctgtcttgaggtgggcgctcacc +cgagatccattaatgacaaccccaatgtcctgcaccggtgcttcctccgcccggtaggaagagacgtccagc +gctggtactctgcccccactcgtggacccgcagccaattgccgccgttctgcgttacgcggtctaccccctg +tcgaccgcacatactgtttcgacgggttctctcgctgctcctttgccgctgagaccgggatcgctttatatt +cactgcatgacctctggccctcggatgttgcggaggctatggcccgccatgggatgacgcgtttgtacgctg +ccctccatctg-ccccctgaggtcctgttaccacctggtacttatcatacaacctcctatcttctgattcac +gacggtaaccgtgccgtcgtgacttatgagggggatactagtgcgggttataaccatgatgtgtctatactt +cgtgcatggatccgcactactaaaattgttggtgatcacccactggtaatcgagagggtccgcgctattggc +tgtcattttgtgttactccttactgcagcccccgagccgtccccaatgccttatgtcccttaccctcgttca +acagaggtgtatgttagatctatatttggtcctggc---------gggtcgccttctctcttcccatcagcc +t----------gctctaccaaatcca-catttcatgctgtgccggttcatatttgggaccggctcatgcttt +ttggtgctactttagatgatcaggccttctgctgctcgcggcttatgacctatctccgtggaattagctata +aagtgaccgtcggcgcacttgttgccaacgaaggttggaacgcctcggaggatgcgcttaccgctgttatta +ctgcagcgtatctgactatctgccatcagcgctacctacggacacaggccatttcyaaaggcatgcgccgtt +tagaggttgagcatgcccaaaaatttatcacaaggttatacagctggttgtttgaaaaatc---------rg +gccgtgattacatccccggccgtcagctccagttttatgcacagtgycgccgttggctctcggctggctttc +acctggacccyagagtccttgttttcgacgaggcggtcccctgc---cgctgtcggagcttcctaaagaa-- +----ggctgccggaaaattttgytgttttatgaaatggytgggccagga------gtgcacttgctttcttg +----------------agccagcggagggcctggttggcgattgtggc--------catgataacgaggcct +atgaagggtctgaggttgaccccgccgagccagcccatcttgacgtctccgggacctatgcggtccatggcc +gccagcttgaggctctatatagagcgctcaatatccccgatgacattgcagctcgtgcgtcacgtttgacgg +ccacagtggaactcgccgccagtccaggacgactcgagtgccgtacagtgctcgggaataagaccttccgta +catcaataaccgacggtgctcacctcgaggccaacggccc------------------------cgagcagt +acgtcttgacatttgatgattctcgtcaggcaatgggggctgggccccacagcctcacatatgaacttgtcc +ctgctggtctccaggttaaaatatcttct-------aatggcttggactgtactgctatattcccc---cct +ggtggggcgccaagtgctgcgccaggcgaagtagcggctttctgcagcgccctatacaggtacaataggttc +actcagcgccattcgctgaccggtgggctgtggctgcaccctgaggggctccttggcttgttcccccctttc +tccccagggcatttctgggaatctgcaaaccctttctgtggcgagagcacactttacacacggacttggtcc +acatctggtttttctagtgacttttccccacctgaggcggttcacaccgccccagcccttgacat----ggg +accaccctcgggtaccccctcgtcagctggaggtat-----------------ctgggtgct---------- +---------cccatcagcc----tctgtggggt--------------cgacaactgcttcactacctgaaac +tccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtaagccagctaactcgcctagc +ctcactacacctagg-------------------------------------ccccctgcccgtaagctgcc +tacaccacc--------------------------------------accgacccgcacccgtcggc----- +-------------------tcctttacacatatcctgatggggccaaggtgtatgcaggctctctgtttgag +tcggactgtgattggctggttaatgcatctaaccccggccaccgccccggtggtggcctttgccatgcattt +taccagcgttttccggagtcgt------tccatccaactgattttgttatgcgtgaggg---cctcgccgca +tatactttgagcccgcgtccgatcattcatgctgtggcccctgactacagggttgagcagaaccccaagagg +ctagaggcggcatatcgcgagacctgctcccgtctcggcacagctgcttacccattactgggttcggggatc +taccaggtccctgtaggcctgagcttcgacgcctgggagcgtaaccaccgccccggcgatgagctttatctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaagctaataagccaactca--------------------------------------------------- +------------------------------------------gccggccctgacaattactgaggacaccgc +cc------------gtacagctaaccttgcactcgagattg------------actccgccactgaggtggg +acgtgcttgt---gccggctgcactatcaatcccggtattgtccactaccagttcaccgccggggtccccgg +ctccggaaagtcaaggtccatacaacaaggagatgtcgacgttgtggtcgtgccaacccgtgagcttcgcaa +cagttggcgacgccgcggttttgctgcttttacacctcacacagcagctcgtgttactgccggtcggcgtgt +ggtgatagatgaggcaccttcgataccaccgcacttgctgttgctccacatgcagcgagcctcatcggtcca +tctccttggtgatcccaaccagatccccgctattgactttgagcacgccggtctggttccagctattcgtcc +tgagcttgcccctactagctggtggcacgtcacccaccgctgccccgccgatgtctgtgagctcatacgcgg +ggcttacccaaagattcagacgaccagccgtgtgctgcgatctttatactggaatgag------cctgcggt +gggccagaagttggtcttcacgcaggcagccaaggcggccaacccaggtgcaatcaccgttcatgaggccca +aggcgccacatttacggagaccaccatcatagccacggccgacgctaggggccttattcagtcctctcgtgc +acatgccatcgttgcacttacccgccatacagaaaaatgtgttattcttgacgctcctggcctattgcgtga +ggttggcatttctgatataattgttaataacttt------------------------------ttcctggc +tggcg--gagaagtgggccaccaccgcccttctatcataccccgtggcaatccagaccagaacttagacac- +-----cctacgagcattccccccatcctgccaaattagtgcctaccatcagctggccgaggagctgggccac +cggccggccccggtggccgccgtcctgcccccctgccctgagctcgagcaggggctactttacatgccgcag +gagcttacagtgtccgatagcgtcctaatttttgaacttacagacatagtccattgtcgtatggctgccccc +agtcagcgtaaggcggtcctttcgacgctcgtcggtaggtacggccgccggacgaagctgtatgaagcggcc +cattctgatgtccgtgagtctttagggaggtttatccctactattggaccggtccaagctaccacgtgtgag +ctatacgaactggtcgaggctatggtcgagaagggccaggacggctctgccgtgctcgagctcgacctctgc +agccgtgatgtctctcgtattaccttcttccagaaggattgtaataagtttacaacaggtgagaccatcgcc +catggcaaggtgggccagggcatatcggcttggagtaaaaccttctgtgccttattcggcccgtggttccgt +gccattgagaaggagattctggctctactcccacccaacgttttctatggcgatgcctatgaggagtcagtg +ttttctgcagccatttctggggccggctccagtatg---gtctttgagaatgacttttccgagtttgatagt +actcaaaacaacttctctct------------------aggccttgagtgtgtcattatggaggagtgtggc +atgccccagtggcttatccgactgtatcatttagttagatcagcctggaccctgcaagccccaaaagagtct +ctgaaaggtttttggaaaaagcactccggcgaacctggcactctcctctggaacaccgtctggaacatggcg +atcatagcacactgctatgaattccgtgacttgagagtggcagcgtttaaaggggatgattcagtggttctt +tgtagtgactaccgtcagagccgcaatgcagctgccctgatagccggctgtgggttgaaattgaaggttgat +tatcggcctataggtttgtatgccggtgttgttgtggccccgggcctcggtgcactccctgatgttgtccgg +tttgccggtcgattgtctgagaagaactggggcccgggccctgagcgcgctgaacagttgcgcctagcggtt +tgtgattttctccgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgcg-------ttta +cggggttagccccgggctggtgcataaccttattggcatgctacagaccattgctgacggaaaggcccactt +cactgagactgtcaagcctgtgctggatcttacaaattctatcatacagaggttggaatgaataacatgtt- +c----------------tttgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaacccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgcctcccgccgtcgatctacccca---------actggggctgcgccgctaac +tgctgtctcaccagcgcctgacacggccccagtccctgatgttgattctcgtggcgctatcctgcgccgcca +gtataatctgtccacttcccctttaacctcatcagtcgcttctggaactaatcttgtcctgtatgccgcccc +gctcaacccccttttgcccctccaagacggtaccaatactcacatcatggcgactgaggcgtctaattacgc +tcagtaccgggttgtccgggcaacaatccgctaccgccctttggtcccgaatgccgtcggtggttatgcaat +ttctatttccttttggcctcagactacaactacacccacctctgttgacatgaattctattacttctaccga +tgttaggatcttagtccagcctggcatagcctctgagctggtcatccctagtgagcgccttcactatcggaa +ccaaggttggcgctcagttgagacatcgggtgtggccgaggaggaggcgacatcaggcttagtcatgctttg +tatccatggttctcctgtaaattcctacaccaatacgccctatactggggcattggggctactcgactttgc +actcgagcttgaatttagaaatttaacccccgggaacactaacacccgcgtgtcccgttacactagcacagc +ccgacaccgcttgcgtcgtggtgccgatggaacagctgagcttacgaccactgcagccacacgttttatgaa +ggacttgcacttca---ctgggacaaat---ggcgttggtgaggtgggtcgtggcatagccctaacactatt +taatcttgctgacacacttctcggcgggctaccgacagaattgatttcgtcggctggaggccaactgttcta +ctcccgcccggttgtctcagccaatggcgagccaactgttaagttatacacctctgtcgagaacgcgcagca +ggacaagggcattgctataccacacgatatagatttgggggattcccgtgtggttatacaggattacgacaa +ccaacatgagcaggaccggcctactccatcgccggccccgtcccgtcccttctcagtccttcgagccaacga +tgttttgtggctatc-----------------------------tctgacagcggccgaatatgat------ +cagactacttacggctcttcgaccaatcctatgtatgtttcagacactgtcacatttgt---taatgtggcg +acaggtgctcaggctgttgcccgttcccttgattggtctaaggtcactttggacggccggccactcactacc +at-----ccagcagtactccaagacattttatgtac-tgccgcttcgtggcaagctctctttctgggaagct +ggtacgactaag--gccggttacccttataattataatactactgctagtgaccagatcctaattgagaatg +cagccggtcat------cgtgttgccat-atctacttatacaactagtctcgg--------------tgccg +gccctgtgtcggtttc-tgcggtcggcgttcttgcgccgcattctgctttagccgtgcttgaagatactatt +gatt---------atcctgctcgcg----cccatacttttgatgatttttgccctgagtgccgtaatc---t +cggcctgcagggctgcgctttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcctaattaa-tt----c--ctct-ttt------gt +gccc-cct--------tc-taag-tt-tt----cc-tt-tgt----------------tatt-t-------c +ctttttct----gcg----------------tttcgcgctccctg---------------------gaa--- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MK050463.1/17186/1-7186 |Hepeviridae isolate hare/AT/GER/2008 polyprotein, hypothetical protein, and capsid protein genes, complete cds +------------------------------------------------------------------------ +----atggaggcccatcagtttattaaggctcctggcatcacaaccgccattgag---caagctgctctggc +tgccgccaattctgccttgtcgaatgctgtggttattcggccgttcttgtcccggactcagactgatatcct +tattaatcttatgcagccccgacaactggttttccggccagaggtcttttggaatcaccctatacagcgtgt +tattcataatgagttggaacagta---ttgtcgggccc-gcgcggggcgctgtcttgaagtcggtgcacatc +caagatctattaatgacaatccaaacatcttgcaccggtgtttcctccggcctgttgggagggacgttcagc +ggtggtactccgctcccacccgcggccccgctgctaattgccgccgctccgcgttacgtggccttcctccag +ttgatcgcacttactgtttcgatgggttttctggctgtgcattcgcagctgagaccggcattgctctatact +ctttacatgacatatggcctgctgatgttgcggaggcgatggcgcgtcacgggatgacgcgcttgtatgctg +tattacatctc-cctcccgaggtactcctgccggcaggcacctatcacactgcctcctaccttcttattcac +gacggcagtcgcgctgttgtgacttatgaaggtgacactagcgctggttacaatcatgatgtttctgttctt +cgcgcctggatccgtacgacaaaaatcgtcggcgatcatcctttggtgattgagcgcgttcgcgcgatcggt +tgccatttcgtgctattgcttactgctgcccctgagccgtctcctatgccctacgtccccttccctcgttcc +acggaggtgtttgttcgctcaatcttcggcccggga---------ggttctccttccctctttccgtcagct +t----------gctctacaaaatcca-ccttctatgccgtccctgtgcatatctgggataggcttatgctct +ttggtgctacactaaatgaccaggccttttgctgctccaggcttatgacttaccttcgtggtatcagttata +aagtcactgttggtgctcttgtcgctaacgagggctggaatgcctctgaggatgctcttaccgcggttatca +ctgcggcgtacatcactatttgtcatcagcgttatctctccactcaagcgatctataaaggcatgcgtcggc +tggagctcgagcacgcccagaagtttgttactaggctttatagctggctgtttgagaagtc---------tg +gtcgcgactacatccctggccgccagattcaattctacgcacagtgccggcgctggctgtctgccggcttcc +atctggatccgagagtacttgtctttgacgagtctgtgcactgc---cgttgtaggggctttgtaaggaa-- +----tgtggctaagaaggtttgttgttttatgaaatggctcggccagga------gtgcacctgctttctgg +----------------agcctgtggagggccttcttggtgatcagggc--------catgataacgaggcct +atgaggggtctgaggttgaccccgccgagcccgctccccccgacatatcggggacttacacagtccacgggc +aactgttggtggacttgtatagagcccttaatatcccacatgatatcgcggcccgagcagcccgcctgtctg +ctactgtcgagctcgttgctagcccaggacggctcgagtgccgtactattctaggcaataagacctttcgca +ctaccatcgtagacggcgcccagttggaggcaaatggccc------------------------tgaacagc +acgtcctctcgtttgatgaggaccgccagtgcatgggcgccgggcagcatagcctctcgtatgagcttaccc +ctagtgggctccaggttaaaatttcgtct-------aacggtttagactgtacggcggtttttccc---cct +ggaagagcccctagtgcgggagctgcggaggtttctgccttctgcagtgcattatatagatacaataggacc +atccagcggcactcggtcgttggcgggctgtggttacatccggaggggttgcttggtcttttcccgcctttt +tctcccggtcatttttgggagtcagcaaaccccttttgcggcgaggggaccctttacaccagaacctggtcc +acgtcaggcttttctagtgatttctcgccacttgaagcggttgttaatgccccacctcctgtcagc------ +-ttgccagacacgccggcccctactggggttggcgt-----------------ccgggcgtt---------- +---------gcctccgctt---------------------------------------------cctcaaac +tcttg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------------gatctgcccatctgccca-- +-ccgacacccctgag-------------------------------------cctcctactcataagccgcc +ggggcaacc--------------------------------------tttggttcgtagccgccgcc----- +-------------------tcctctatacctatccagacggcgctaagatctactcggggtccttgtttgag +tccgactgtgattggctggtcaatgcgtctaaccccggccaccgcccgggtggtggactttgtcacgccttt +taccagcgcttccctcagtctt------tcgaccatagtaagttcattatgcgggacgg---gctcgccgca +tacacactgtcgccccgcccgattatccatgccgtcgctcctgactatagagttgcacataacccaaagagg +ctggaggcggcgtaccgcgagacttgctctcgccttggtaccgccgcctacccgttgctgggctcgggcatc +tatcaggtccccgtgggcccaagctttgacgcttgggagcgtaaccaccggcccggtgatgaactttatctt +actgagcctgcgaccacc-------------------------------------------------tggtt +tgaggctaatcggccggcccggccccttgcacccgctaatcttggcatagccgtagccgatggttccgcagt +ccgggccagctccccgccagagaccactggcggcccagaactacccgccctaaccataacggaggatatagc +cc------------ggactgctaaccttgctttggaaattg------------attccaagactgagctggg +ccgtgcctgt---gccggctgtgccgttagccccggagtcgtccgttatcaattcaccgcgggtgttcctgg +ctctggtaaatcgaggtccatacagcagggtgatgttgatgtggtagttgtgcccacccgcgagctccgtaa +cagttggcgtcgccgcgggtttgctgcatttacaccgcattcggccgcccgtgtcaccggtggccggcgtgt +tgtaattgatgaggctccatccctcccgccccacctgcttttattgcacatgcaacgggcctcgtccgtgca +cctccttggtgacccgaaccagatacctgcaattgatttcgagcacgctggtcttgtccctgcaatccgccc +tgaactggcccccaccagttggtggcatgtcacgcaccgctgccccgcggatgtatgcgagcttatacgcgg +ggcttatcctaagatccagactaccagccgtgtcttgaggtcattgttctggggtgac------ccccccgc +cggccagaaattggtttttacacaagctgcaaaggccgccaaccccggcgcgatcactgttcatgaagctca +gggggctacattcacagaaactaccattattgcgacggctgatgcaaggggcctcatccagtcttctagggc +gcatgctattgttgcgctcaccaggcatacagaaaaatgtgttatcatcgatgctccggggttgcttcgtga +ggtgggtatatcggatgtgatagtcaataacttc------------------------------ttcctggc +cggtg--gtgagatcggtcaccaccgcccctctcttatacctcgtggtaatccagatcggaatctcgagac- +-----tcttcaagcttttcctccttcctgtcagattagtgcttactaccagytggctgaggagcttggccac +cggcccgcgccggtggctgccgttctgccgccctgccccgagcttgagcagggtctgttgtatatgccgcaa +gagcttaccgtgtctgacagtgtcctggttttcgagttaactgacatagtccactgccgcatggctgcccct +agccagcgcaaggccgtcctctctacgcttgttgggaggtatgggcgtcgaacgaggttatatgaggccgcc +cactcagatgtgcgtgagtcgcttgcaaggtttattccaaccatcggccctgtgcaggccacaacgtgcgag +ctttacgagctggttgaggcgatggtggagaaaggtcaggatgggtcggccgtgcttgaactcgacctttgt +aaccgagatgtgtctcgaataacgttctttcagaaagactgtaataagttcacaaccggggagactattgcc +cacggtaaagtaggccaaggaatatctgcttggagcaagaccttttgcgctttatttggcccttggttccga +gctatcgagaaacagatactagccttgctcccgcctaacatcttttacggcgacgcctatgaggattctgta +ttctctgcggctgtcactggcgcggggtcgagtatg---gtatttgaaaacgatttttcggagtttgatagc +acccagaataatttctcact------------------tggtcttgaatgtgtgattatggaagaatgcggt +atgcctcagtggctagttaggctataccacctaattcggtcgacctggatcctacaggctccaaaggaatct +ttgaaaggattttggaagaaacactcyggcgagcccggcacactgctttggaacaccgtttggaatatggcg +gtcatagcccattgctatgaattccgcgatttcaaggttgccgcgtttaaaggagacgactcggtggtcctc +tgcagcgattaccgccagagtcgttttgcggcggcccttatagcaggctgtgggcttaagcttaaagttgac +taccgccccattgggctytacgccggtgttgtggttgctcctggtcttggtacactgcccgatgtcgtccgg +tttgctggtcggctgtcagaaaagaactggggtccaggccccgaacgggccgaacagttacgcttggctgtt +tgcgattttctaagaaagctgacgaatgttgctcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggtgtgagccctgggcttgtgcataaccttatcggcatgttgcaaactattgccgatggcaaggcccatta +tactgaaactgtgaagcctgtgttagaccttacgaactctattgtgcagaggttagaatgaataacatgtc- +t----------------tttgcatcgctcatggg------------gtcaccatgcgccctagggctattct +gctgctgctcttcgtgtttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcggcggcggttc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatwttcat---- +--------------ccaaccaaccccttcgccgctgaccttgactcacattccgggtctggagcccgccccc +ggcagccagcccg---------------tccccttggcacctcctggcgcgacctgtccca----------- +------gcgcccccccgctaccccacgccgtcgacctacccca---------actggggctgcgccgctgac +tgccgtttcacccgcacctgacacggcgcctgtcccggatgtcgactcacgcggggcgattctgcgccgcca +atacaacctctcaacttcgcccctaacctcaactgttgcttcgggcactaatcttgttttgtatgctgctcc +gctcaaccctctcctgcctctccaggatggcaccaacacacacatcatggcgactgaggcgtctaactatgc +ccaataccgagttgtccgggccacgatccgttatcgccctttggtgcctaatgcggttggtggctacgcaat +ctccatttcgttctggcctcagactaccactacccccacctctgttgatatgaattcaatcacttcaactga +tgttaggattctcgttcaacccggtttggcttccgagcttgtcataccaagtgagcgcctccactaccgtaa +tcagggatggcgttctgtggagacctctggtgtggcygaggaagaggccacctccggccttgtcatgctctg +tattcatggctcccctgtgaattcatacaccaacaccccttayacaggggctttggggcttcttgattttgc +acttgagattgagttccgcaacctgactccrgggaacaccaacacacgtgtttctcggtacactagtactgc +ccgccaccgtttgcgtcgtggtgccgatggaaccgccgagcttacaaccacggcggccacacggtttatgaa +agatcttcatttta---ctgggatgaac---ggggttggtgagatcggccgtggcatagccctgacattatt +taacttagctgatacacttcttggtggcctgccgacagaattgatttcgtcggccgggggtcaggtattcta +ctcccgtcccgtcgtctcggccaatggcgagccgactgtcaaattatatacatcagttgagaacgcacagca +ggacaaggggatcgcgatacctcatgatatcgatctcggtgattcccgcgttgtcattcaggactatgacaa +ccagcacgagcaggaccggcctaccccctcaccagccccttctcgccctttttctgtcctacgcgctaacga +tgtgttgtggctttc-----------------------------actcactgctgccgagtatgac------ +caaactacatatggctcgtccaccaaccctatgtatgtttcagacaccgtcacatttgt---taatgttgcg +acaggtgcccaagccgtcgcccgctcccttgattggtctaaggttactttggacgggcgaccgcttacaact +at-----ccagcagcattctaagacattttatatct-tcccccttcgtggcaagctctccttctgggaggct +gggaccactaaa--gctggctacccctacaattataatactactgccagcgaccagatcctgattgaaaatg +cgcctgaccat------cgtgttgctgt-ctccacctatactactagtctagg--------------cgctg +gccctgtctctatctc-tgcagtcggtgtgcttgccccgcattctgttctagctgtccttgaggatactact +gatt---------atcccgcccgtg----cccacacttttgatgatttttgtcctgagtgccgtaccc---t +tggcctgcagggctgcgctttccaatc--------tactgttgctgagcttcagcgtct------------- +--------taagatgaaggtgggcaaaacccgggagttttaa------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH991996.1/17214/1-7214 |Hepeviridae isolate BDHEVM079, complete genome +--------------------------aggcagacca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccaccagtttatcaaggctcctggcatcactactgctattgag---caggctgctctagc +agcggccaattctgccctggcgaatgctgtggtagttaggccttttctctctcaccagcagattgagatcct +cattaacctaatgcaacctcgccagcttgttttccgccccgaggttttctggaatcaccccatccagcgtgt +cattcataatgagctggagctcta---ttgccgcgccc-gctccggccgctgccttgaaatcggcgcccatc +cccgctcaataaatgataatcctaatgtggtccaccgctgcttcctccgtcctgttgggcgtgatgttcagc +gttggtatactgcacccactcgcgggccggctgctaattgccggcgttccgcgctgcgcgggctccccgctg +ccgatcgcacctactgcttcgacgggttctttggctgtaattttcccgccgagacgggcattgccctctact +cccttcacgatatgtcaccatctgacgttgccgaggccatgtttcgccatggtatgacgcggctttatgccg +ctctccatctt-ccacctgaggttctgttgccccccggcacataccgcaccgcatcgtacttgctgattcat +gacggtaggcgcgttgtggtgacgtatgagggtgatactagtgctggttataaccatgatgtctccaatttg +cgctcttggattagaaccaccaaggtcactggagatcaccctcttgttatcgagcgggtcagggccattggc +tgccattttgttcttttacttacggcggccccggagccatcacctatgccttatgtcccttacccccggtct +accgaggtctacgtccgatcgattttcggcccgggt---------ggtactccttccttattcccaacttca +t----------gctccactaagtcca-cctttcatgctgtccctactcatatttgggaccgccttatgttgt +ttggggctaccttggatgaccaagccttttgttgctcccgtttaatgacttatcttcgcggcattagctata +aggttactgtgggtacccttgtggctaacgagggctggaacgcctctgaggacgccctcacagctgtcatca +ccgccgcctatcttaccatttgtcaccagcggtatctccgtacccaggccatatctaaagggatgcgccgcc +tggaacgggagcatgcccagaagtttataacacgtctttacagctggctcttcgagaagtc---------cg +gccgtgattacatccccggccgtcagttggagttttacgcccagtgcaggcgctggctttcggccggtttcc +atcttgacccacgggtgttggtttttgacgagtcggccccctgc---cattgcaggaccgtggtccgtaa-- +----ggctctctcaaagtcctgctgctttatgaagtggcttggccagga------gtgtacctgtttccttc +----------------agcctgcagaaggcgtcgttggcgaccagggc--------catgataatgaggcct +atgaggggtccgatgtcgaccccgccgagcccgccattagtgatatatctgggtcctatgtcgtccctggca +cagccctccaacctctttaccaggccctcgatcttcccgctgagattgtggcccgtgcgggtcggctgaccg +ccacagtaaaggtctcccaaaccgatgggcggatcgattgtgagacccttcttggtaacaaaactttccgca +cgtcattcgttgacggggcggtcttagagaccaatggccc------------------------ggagcgcc +acaatctttcctttgatgtcagtcagagcactatggctgctggcccttttagtctcacctatgccgcctccg +cagctgggttggaggtgcgctatgttgct-------gccgggcttgaccaccgggcggtttttgcc---ccc +ggagtttcaccccggtcagcccctggcgaggtcaccgccttttgctccgccctatacaggttcaatcgtgag +gcccagcgccactcgctgaccggtagtttatggttccatcctgaggggctccttggcctctttgccccgttt +tcacccgggcatgtctgggagtcggctaatccattctgtggcgagagcacactatatactcgtacttggtcg +gaggttgacgccgtctctagtccagcccggcctgatttaggttttatgtctgagccttctatacctagtagg +gccgccac----------------------------acctat-----------ccccgcggc---------- +---------ccctctacct----tcccctgccc--------------cggacccctccccccccccctctgc +cccgg------------------------------------------------------------------- +-------------------------------------------------------------cgc-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctgacgagccggct------tctggc +actaccgc-----------------cgg------------------------ggccccggccataacccacc +aga----------------------------------------------cggcccggcaccgccgcc----- +-------------------tgctctttacctacccggatggctctaaggtatttgctggctcgttgttcgag +tcgacatgtacgtggctcgtcaacgcgtccaatgtcgaccaccgtcctggcggcgggctttgccatgcattt +taccaaaggtaccctgcctctt------tcgatgccgcctcttttgtgatgcgcgacgg---cgcggccgcg +tacacattaaccccccggccaataattcatgctgtcgcccctgattataggttggaacataacccaaagagg +cttgaggctgcttatcgggagacttgctcccgcctcggtaccgctgcgtacccgcttctcgggactggcata +taccaggtgccgatcggccccagttttgatgcttgggagcggaatcaccgccccggggacgagttgtacctc +cctgagcttgctgccaga-------------------------------------------------tggtt +tgaggccaaccggccgacccg--------------------------------------------------- +------------------------------------------cccaactcttactataaccgaggatgttgc +ac------------ggacagcgaacctggccattgagctgg------------actcagccacagatgtcgg +ccgggcctgt---gccggctgtcgggtcacccccggcgttgttcagtaccagttcactgctggtgtgcctgg +gtccggcaagtcccgctctatcactcaagccgatgtggacgtcgtcgtagtcccgacacgtgagttacgcaa +cgcctggcgccgccgcggcttcgctgctttcaccccgcacacagccgctagagtcacccaggggcgccgggt +tgtcattgatgaggctccttccctcccccctcacctgctgctgctccacatgcagcgggccgccaccgtcca +tctccttggcgacccgaaccagattccagccatcgattttgagcacgctgggcttgttcccgccatcaggcc +cgacttagcccccacctcctggtggcatgtcacccatcgctgccctgcggatgtatgtgagctaatccgtgg +tgcataccctatgatccagaccactagccgggtcttccgttcgttattctggggcgag------cctgccat +tgggcagaagctagtgttcacccaggcggctaaggccgccaaccccggctcagtgacagtccacgaggcaca +gggcgctacctacacggagaccactatcattgccacggcagatgcccgaggccttattcagtcgtctcgagc +ccatgccatcgtcgccctgacgcgccacactgagaagtgcgtcatcattgacgcaccgggcctgctacgcga +ggtgggtatctccgatgcaattgttaataacttc------------------------------ttccttgc +tggtg--gcgaaattggccaccagcgcccgtctgttattcctcgtggcaatcctgatgccaatgttgacac- +-----cctggctgccttcccaccgtcttgccagattagtgccttccatcagctggctgaggagcttggccat +agacctgcccctgttgcagctgttctaccaccttgccccgagcttgaacagggcctcctctacctgccccag +gaactcaccacctgtgatagcgttgtaacatttgaattaacagatattgtgcactgccgcatggctgctccg +agccagcgcaaggctgtgctgtccacactcgtgggccgctacggccgccgcacaaaactttacaacgcctcc +cactctgatgttcgcgactctctcgcccgttttatccctgccattggtcccgtacaggtcacaacttgtgaa +ttgtacgagctagtggaggccatggtcgagaagggccaggatggctccgccgtccttgagctcgacctttgc +aaccgtgacgtgtccaggatcaccttctttcagaaggattgtaataagttcactacgggcgagaccatcgcc +catggtaaagtgggccagggcatttcggcctggagcaagaccttttgcgccctcttcggcccttggttccgt +gctattgagaaggctattctggccctgctccctcagggtgtgttttacggtgatgcctttgatgacaccgtc +ttctcggcggctgtggctgcagcaaaggcgtccatg---gtgtttgagaatgacttttctgagtttgactcc +acccagaataatttctctct------------------tggcctagagtgtgctatcatggaggagtgcggg +atgccgcagtggctcatccgtttgtatcaccttataaggtctgcatggatcctgcaggccccgaaggagtct +ctgcgagggttttggaagaaacactctggtgagcccggcactcttttatggaatactgtctggaatatggcc +gttattactcactgctatgacttccgcgatttgcaggtagctgccttcaaaggtgatgattcaatagtgctt +tgcagtgagtatcgtcagagcccgggggctgctgtcctgatcgccggctgtggcttaaagttgaaggtggac +tttcgcccgattggtttgtatgcaggtgttgtggtggcccctggtcttggcgcgctccctgatgttgtgcgc +ttcgccggccggcttaccgagaagaattggggccctggccctgagcgggcggagcagctccgccttgctgtg +agcgattttctccgcaagcttacgaatgtagcacagatgtgtgtggatgttgtttcccgtg-------ttta +tggggtttcccccgggctcgttcataacctgattggcatgctacaggctgttgccgatggcaaggcccattt +tactgagtcagtaaagccagtactcgacctgacaaattcaatcttgtgtcgggtggaatgaataacatgtc- +t----------------tctgctgcgcccatgggt---------tcgcgaccatgcgccctcggcctatttt +gctgctgttcctcatgtttctgcctatgctgcccgcgc---------------------------------- +-caccgc------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggttc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----caatcccctatattcat---- +--------------ccaaccaaccccttcgcccccgatgtcaccgctgcggccggggctggacctcgtgttc +gccaacccgcccg---------------accactcggctccgcttggcgtgaccaggccca----------- +------gcgccccgccgctgcctcacgtcgtagacctaccaca---------gctggggccgcgccgctaac +cgcggtcgccccggcccatgacaccccaccagtgcctgatgtcgactcccgcggcgccatcttgcgccgtca +gtataatctatcaacatccccccttacctcttccgtggccaccggtactaatctggttctttatgccgcccc +tctcagtccgcttttacccctccaggacggcaccaatactcatataatggccacggaggcttctaattatgc +ccagtaccgggttgcccgtgccacaatccgttaccgcccgctggtcccaaatgctgtcggcggctatgccat +ctccatttcattctggccgcagaccaccactaccccgacgtccgtcgatatgaattcaataacttcgacgga +tgtccgtattttagtccagcccggcatagcctctgagcttgtgatcccaagtgagcgcctacactatcgcaa +ccaaggttggcgctccgtcgagacctccggggtggctgaggaggaagccacctccggtctcgttatgctttg +tatacacggctcacccgttaattcttatactaacacaccctataccggtgccctcgggctgttggacttcgc +ccttgagcttgagttccgcaacctcacccccggtaacaccaacacgcgggtctcccgttattccagcactgc +tcgccaccgccttcgtcgtggtgcggacgggaccgccgagctcaccaccacggccgccacccgcttcatgaa +ggacctttatttca---ccagtactaat---ggtgttggtgagattggccgcgggatagctcttaccctttt +taaccttgctgacactctgcttggtggcctgccgacagaattgatttcgtcggctggtggccagctgtttta +ctctcgccccgttgtctcagccaatggcgagccgactgttaagctgtatacatctgtagagaacgctcagca +ggataagggtatcgcaatcccgcatgatattgacctcggagagtcccgtgtggttattcaggattatgataa +tcaacatgaacaagatcggccgacgccctctccagccccgtcgcgccctttctctgtccttcgagctaatga +tgtgctctggctctc-----------------------------tctcaccgctgctgagtatgac------ +cagtccacttacggttcttcgactggcccagtttatgtttctgactctgtgaccctggt---taatgttgcg +accggcgcgcaggccgttgctcggtcgctcgattggaccaaggtcacacttgatggtcgccccctttccacc +at-----ccagcagtactcgaagactttctttgtcc-tgccactccgcggtaagctctctttctgggaggca +ggtacaactaag--gctgggtacccctataattataacaccactgctagcgaccaactgctcgttgagaatg +ccgccgggcac------cgggtcgctat-ttccacttacaccactagcctggg--------------tgccg +gccccgcttccatttc-tgcggttgctgtcttagccccccactctgcactagcactgcttgaggataccttg +gatt---------accctgcccgcg----cccatacatttgatgacttttgcccagagtgccgccctc---t +cggcctccagggctgtgctttccagtc--------cactgtcgctgagcttcagcgcct------------- +--------taagatgaaggtgggtaaaactcgggagttatagttta-ttt------gctt----------gt +gcccccct--------tc------tttctg------tt-----------------gcttatt-t-------c +tcttttct----gcg----------------tttcgcgctccctg---------------------aaaaaa +aaaaaaa---------------aaaaaaa------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MK390970.1/17210/1-7210 |Hepeviridae isolate 17RS25514, complete genome +---------------------------------------tatg-------------c-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +cgcggccaactctgccttggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaaccgagattct +tattaatctgatgcagccccggcaactggttttccgtcctgaggtcctttggaatcatcccatccagcgggt +tatacacaatgaactggaacagta---ctgccgggctc-gagctggtcgttgtttagaggttggagcccacc +ctagatctattaatgataaccctaatgttctgcaccggtgcttcttacgaccagtcgggagggatgtccagc +gctggtattctgctcctactcgcggccctgcggcgaactgccgccgctccgctctgcgcggcctcccccctg +ttgatcgcacctattgttttgatgggttttcctcctgctcttttgccgcagagactggcgtggccctttatt +ctttgcatgacctctggccggccgatgttgcagaggctatggctcggcacgggatgacgcgcttgtacgccg +cactacatctc-ccccctgaggtactacttccaccaggcacatatcatacaacctcgtacctcctgatccat +gacggcgaccgggctgttgtgacttatgaaggtgacacaagtgcaggttacaatcatgatgtttccatactt +cgtgcatggatccgcacaactaagatagttggtaatcacccgttagtgatagagcgggtgcgcgccatcggc +tgccattttgtattgttgcttactgcggcccccgagccgtcgcccatgccttatgtcccttaccctcgatca +acagaggtgtatgtccgctccatattcggccctggc---------gggtccccgtctctgttcccgtcagcc +t----------gctctacaaagtcca-catttcatgcagtcccggttcatatctgggaccgtctcatgcttt +ttggtgctaccctggatgaccaggcgttttgctgctcacggcttatgacctacctacgtgggatcagctaca +aggttactgttggtgctcttgtcgccaatgagggatggaacgcctcagaggacgctcttacggctgtcatta +ctgcagcgtatttaaccatttgtcatcagcgctaccttcgcacccaggcaatatccaaaggtatgcgccggt +tggagctcgagcacgctcaaaaattcattactagactttatagctggttatttgagaagtc---------cg +gccgtgattatatccccggccgtcagcttcagttctatgcacagtgtcgccgctggctatcggcgggttttc +atcttgaccctagggtgctcgtctttgatgagtcagtaccctgc---cgttgcaggacgtttcttaagaa-- +----agttacaggcaagttctgctgctttatgaagtggttggggcagga------gtgtacctgtttcttag +----------------agccagcggagggcctgttgggtgaccagggc--------catgacaatgaagctt +ttgagggttctgaggtcgaccaggctgagcccgcacaccttgacgtctcggggacctatgcagttcatggcc +gccagcttgaggccttgtatagggcgcttaatatcccgcatgacattgccgcccgagcatcccgcctaactg +ccactgttgaacttgttgctagcccagaccgtttggagtgtcgtactgtacttgggaacaagacttttcgaa +caacagtagttgatggcgcccacctagaggcaaatggccc------------------------tgaggagt +atgtccttacgttcgatgcctcccgccaatcaatgggggctgggtcccacaatcttacttacgagctcactc +ctgctggcctgcaggttaggatctcgtct-------aatggtctagattgcactgcgacattcccc---cca +ggcggcgcccctagcgccgagccgggggaggtggctgctttttgcagtgccctttatagatataataggttc +acccaacggcactcgttgacaggcggcctttggttgcatcctgaggggttattaggtatatttccccctttc +tctcctggacatctgtgggagtccgccaaccccttctgtggagagggaactctgtacacccggacctggtcc +acatctggattctctagtgatttttccccccccgaagcggctgcctccgcgccagccgccattttag-aggg +gccatctc---gccccactccacctgtcagtgacat-----------------ttgggtatt---------- +---------gccacctacc----cctgaggagc--------------ctcgggctgatgtagtgccggcccc +tccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tccctgagcccgttcgatcacccggt +cccaacgagtctaag-------------------------------------gcccctgtgcgtaagccacc +gacaccacc--------------------------------------gtctcctcaaactcgccgtc----- +-------------------tcctttacacttatccggacggcgctaaggtgtatgcagggtcgttgtttgaa +tcgaattgtgattggctggtcaatgcatcaaaccctggccaccgccctgggggcggcctttgccacgctttt +taccaacgttaccccgagtcgt------tccatccgaccgagttcattatgcgcgatgg---cctcgccgct +tacaccttgaccccccgccctattatccatgcggtggcccctgattacagggtcgagcagaaccctaagcgg +cttgaggctgcgtaccgagagacctgctcccgcctcggtactgctgcctatccactcttgggtgctggcata +taccaggtccctgttagcctcagctttgatgcctgggagcgcaaccaccgccccggggatgagctctacctg +accgaccctgctgctaac-------------------------------------------------tggtt +cgaggccaataagcccacaca--------------------------------------------------- +------------------------------------------gccggctcttacaataactgaggacacggc +cc------------gtacggccaaccttgcattggagatcg------------atgccgctacggaggttgg +ccgtgcttgt---gccggctgtacggtcagccccgggattgtgcactatcagtttactgccggggtcccagg +gtcggggaaatcaaggtccatacagcagggtgatgtcgatgtggtggttgtacctacccgggaactccgtaa +tagttggcgccgccggggctttgcggcttttacacctcatactgcagcccgggtcactacgggccgccgtgt +tgtgattgacgaggccccgtcccttccaccgcacctgctactcctgcatatgcagcgagcttcgtcggttca +ccttctcggcgacccaaatcagatccccgccatagactttgagcatgccggcctagtccccgcgatacgccc +tgagcttgcgcccaccagttggtggcatgttacgcaccgttgtcctgctgatgtatgcgagctcatccgcgg +ggcctacccgaagattcagaccactagtcgtgtgctgcggtctctattttggaatgag------cctgctat +tggccagaggctagttttcacgcaggccgctaaggccgccaaccctggtgcaattacagtccatgaggccca +gggcgccacttttaccgaaactacgataatagccacggccgacgccaggggccttatccagtcctctcgtgc +tcacgcgatagtagcactgacccgccatactgagaagtgcgttatactggatgcccccggcctgcttcgcga +ggtcggcatatcagatataattgttaataatttc------------------------------ttccttgc +cggtg--gggaggtaggccaccaccgtccctccgtaatacctcgtggcaatcctggtcagaatctcgagac- +-----attacaggccttcccgccctcctgccagataagtgcctaccaccaactagctgaggagttaggccac +cgcccagcccctgtcgccgctgttctgcccccctgccctgggcttgagcagggcctgttgtacatgccacag +gagctcacggtgtctgacagtgtgctggtctttgagctcacggacatagtccactgccgtatggccgcccct +agccaacgcaaagctgtcctttcgacgcttgtcgggaggtacggccgcaggacgaagctgtacgaggcagcc +cactctgacgtccgtgagtctttggccaggttcatccctactatcgggcctgtccgggctaccacatgtgag +ttgtatgagctggtcgaggctatggtggagaagggccaggatggctctgctgtgttggagcttgatctctgc +aaccgtgatgtgtcccgcatcacgtttttccagaaagactgtaacaagtttaccaccggggagaccatcgcc +cacggcaaggttggccagggcatctcggcctggagtaagaccttttgtgccttgtttggcccatggttccgt +gctatcgaaaaggaaatattaaccctgctcccgcctaacatcttttacggcgacgcctatgaagagtccgtg +tttgctgccgccgtgtccggggcggggtcttgcatg---gtatttgaaaatgacttctcggagtttgatagc +acccaaaataatttctctct------------------tggccttgagtgtgtaattatggaagaatgcggt +atgccccagtggctaatccggttgtaccatttggttcgatcggcctggatcttacaggcgccgaaggagtct +cttaaaggcttttggaagaaacattctggtgagcccggcaccctcctttggaacaccgtctggaacatggct +atcattgcacactgctatgagttccgtgactttagggttgccgcttttaagggtgacgattcagtggtcctc +tgttgcgactatcgccagagtcgtaatgcggcagccctgatcgcaggctgcgggctcaaattgaaggttgat +taccgccccatcgggctgtatgctggtgtggtggtggcccctggtctcggggtgctgcctgatgtggtgcgt +tttgctggccggctgtctgagaagagctggggtcccggccccgagcgggcagagcagctgcgcctagcagtt +tgcgacttcctccgagggctgacgaatgttgcgcaggtctgtgttgatgttgtatcccgtg-------tcta +tggggttagccctgggcttgtacataacctaattggcatgctgcagaccattgctgatggtaaggcccatta +cacagagattgttaaacctgtgcttgacctgactaattctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgttgctcctcatgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagtcgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtttcgcaatccgggtctggagctcgccctc +gacagccaccccg---------------tcccctcggctcctcttggcgcgaccagtccca----------- +------gcgcccccccgctgccccccgccgtcgatctgcccca---------gctggggctgcgccgctgac +tgctacatcaccagcacccgacacagctcctgtgcctgatgttgattcgcgtggtgctatactgcgacggca +gtataacctatctacctccccacttacatcatccattgcttctggtactaatttggttctttatgctgcccc +gttaaatcctcttctgcctcttcaagacggcaccaatactcatattatggctactgaggcatctaattatgc +ccagtaccgggttgttcgcgccacaatccgttatcgcccgttggtgccgaatgccgtcggcggctatgcaat +ctctatttcattttggcctcagactactaccacccctacatctgttgatatgaattctatcacctctactga +tgttaggattcttgtccagcccggcattgcctctgagttagtcatccccagtgagcgcctccactatcgtaa +ccagggctggcgctctgtagagacctcgggtgtggccgaggaggaggctacttctggtttggtaatgctttg +catccatggctcccctgttaattcttatacaaacaccccttacaccggggcacttgggctccttgattttgc +cttggagctcgagtttcggaatttgacacccgggaacaccaacacccgcgtgtcccggtactcaagcacagc +acgccaccggctccgccgtggcgctgatggcaccgccgaacttaccaccacggcggctacacgtcttatgaa +ggacctgcacttta---ccggcacgaat---ggggttggtgaggtgggccgtggcattgctttgacactgtt +taatcttgctgacacacttcttggtgggttaccgacagaattgatttcgtcggctgggggtcaattatttta +ttcccgccccgtcgtctcagccaatggcgagccgaccgttaagttatatacatctgtggagaacgcgcagca +agacaaggggatcgccatcccacacgatatagatttgggcgattcccgtgtggttattcaggattatgataa +ccaacatgaacaggatcggcccaccccctcgcctgccccatctcgtcctttttcggtccttcgtgccaatga +tgttctatggctttc-----------------------------tctcactgctgctgagtatgac------ +cagactacgtacgggtcgtccactaacccaatgtatgtctcggacactgttacatttgt---taatgtggcc +acgggggcccaagctgttgcccgctctcttgattggtctaaggtcaccttggatggccgtccccttaccact +at-----tcagcagtattctaaaacattctatgtgc-tcccgcttcgtgggaagctatctttttgggaggcc +ggtacaaccaag--gcaggctatccttacaattataatacaacggctagtgaccagattttaattgagaatg +ctgccggtcat------cgtgtagctat-ttctacttacaccactagtctggg--------------cgcag +gccctgtctctatttc-tgcagttgctgtgttagccccacattcagctctcgctgtccttgaggatactacc +gact---------atccggctcgtg----ctcatacttttgatgatttttgcccggagtgtcgcgccc---t +cggtttgcaggggtgcgccttccagtc--------tactgttgctgagcttcagcgcct------------- +--------taaaatgaaggtaggcaaaacccgggagttttaattaa-tt----c--tttc---t------gt +gccc-cct--------tc-atag-acttc---tgc-tt--------------------tatt-t-------t +tcttttct----gc----------------cctccgcgct-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH504124.1/17237/1-7237 |Hepeviridae isolate HEV_40_Bedford_UK_130115, complete genome +---------------------------gcag-acca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagttggtttttcgacctgaagtgctctggaatcatcctattcaacgggt +tatccataatgaacttgaacagta---ctgtcgggccc-gggctggtcgttgtctagaggttggggcccacc +caagatccattaatgacaacccaaatgttctgcaccggtgctttctacgaccagttgggagggatgttcagc +gctggtactctgctcctacccgcggccctgcggctaactgtcgccgttctgccttgcgtggcctcccccccg +ttgatcgtacctattgttttgatggattttcccgctgttcatttgccgcagaaactggggttgccctctatt +ctctgcatgacctctggccggccgatgttgcggaggctatggcccggcacgggatgacacgtttatatgctg +cactacatctt-ccccctgaagtactattaccacccggtacttaccatacaacttcataccttctgattcac +gacggtgatcgtgctgttgtgacttatgaaggcgatactagtgctggctacaaccatgatgtctccatactc +cgtgcatggatccgtacaactaagatagttggcgaccatccgctggtgatagagcgtgtgcgggctattggc +tgccattttgtgctgctgcttactgcagctcctgaaccgtcaccaatgccttatgttccataccctcggtcg +acagaggtgtatgtccgctctatattcggccctggc---------gggtccccatccttatttccatcagct +t----------gctctacgaaatcta-catttcacgctgtcccggttcacatttgggaccggctcatgcttt +ttggcgctaccctggacgatcaggcgttctgctgctcgcggcttatgacctacctccgcgggattagttaca +aggtcactgttggcgcccttgtcgctaatgaggggtggaatgcttcggaggacgctcttaccgctgttatta +ctgcagcgtatttgaccatttgccatcagcgttacctccgtactcaagctatatccaagggtatgcgccgat +tggaggttgagcatgcccaaaaattcatcacaaggctctatagttggctgtttgagaagtc---------cg +gccgtgactatatccccggccgccagctccagttctatgcacagtgccgccgttggttatcggcgggcttcc +atcttgacccaagggtgcttgtttttgatgagtctgtgccctgc---cgttgcaggacgttccttaagaa-- +----agctgtgggtaagttctgttgttttatgaagtggctggggcagga------gtgcacttgctttctag +----------------aaccagcagagggtctagttggcgatcatggc--------cacgataatgaagcct +atgagggctctgaggtcgatcaggccgaacccgcccatctcgatgtttctgggacttatgccgtccatggcc +accaacttgaggccctgtatagggcgcttaacatcccacatgacatcgctgcccgagcctcccgtttgactg +ccaccgtcgaacttgttgcaggtccagaccgcttggagtgtcgtactgtgctcgggaataagactttccgga +cgacggtggttgatggcgcccatcttgaggcgaatggccc------------------------cgagcagt +acgttctttcgtttgacgcctctcgccagtctatgggggccgggccgcatagtctttcctacgagctcactc +ctgctggtttgcaggtcaagatttcatct-------aatggcctggattgcactgcaacattcccc---ccg +ggcggagcccctagcgctgctccgggggaggtagcagccttctgcagtgccctttacagatacaacaggttc +actcagcgccattcgcttataggtggcttgtggctgcatcctgaggggttattgggtatcttcccccctttc +tctcccgggcacctctgggagtccgctaaccctttttgtggggagagaaccttgtacacccggacatggtca +acatcaggtttttctagcgacttttctccccctgaggcagccgtcgcagcgccggctgctactcc----agg +gttacgcc---accctacacctcctgttagtgatat-----------------ttgggtgtt---------- +---------accgccacct----tctgaagaat--------------tccaggttgacacagtgcccgctcc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcctgctcaaccacctagc +cccgctggatcaaag-------------------------------------gctcccgtgcgtaagccgcc +aacgccacc--------------------------------------atcctcgcgcacccgccgcc----- +-------------------ttctttatacctatccggatggggcaaaggtgtatgcggggtcgctgtttgag +tctgactgtgattggctggttaatgcgtcgaaccccggccatcgtcctggcggcggcctttgccatgccttc +taccaacgctaccctgagtctt------tccacccaactgagttcattatgcgcgacgg---tcttgccgcg +tacactttaactccccggcctattattcatgcagtggcccctgattatagggtagagcataacccaaagagg +cttgaggcagcataccgagagacttgctctcgccgcggtaccgccgcctacccactcctcggctcgggcata +tatcaagttcccgtcagcctcagctttgacgcttgggagcgcaaccaccgccccggggacgagctctaccta +accgacctcgccgctact-------------------------------------------------tggtt +tgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------gccggcccttacgataactgaggatgcagc +cc------------gcacagccaacctagcactggaaatcg------------atgctgctacggaggtcgg +ccgggcctgt---gccggctgtgcagttagtcctggggttgtgcactatcagttcactgctggggtcccagg +ctcagggaagtcgcgttctatacagcagggggatgttgacgtagtggttgttcccactcgggagctccggaa +tagttggcgtcgccggggtttcgcagcttttacacctcatacggcggcccgtgtcaccacgggccgtcgtgt +tgtgattgatgaggccccatctctcccaccgcatctgttgctactacacatgcagcgtgcctcgtcggtcca +ccttctcggcgacccaaatcagatccctgccatagacttcgagcatgccggcctggtccccgcaatacgccc +tgagcttgcgcccaccagttggtggcatgttacccatcgctgcccagctgacgtgtgtgaacttatacgcgg +ggcttatcccaaaatccaaaccactagccgcgtgctgcggtctttattctggaatgag------cctgccat +tggccagaagttagtttttacccaggctgctaaggccgccaaccccggtgcgattaccgttcatgaggccca +gggcgccactttcacggaaactacaatcatagccacagctgacgccagggggctcatccaatcctcccgagc +tcatgccatagtcgcacttacccgccacacagagaagtgcgttattcttgatgcccccggcttgttacgtga +ggtcggtatatcggatgtgattgtcaacaacttt------------------------------ttcctcgc +cggcg--gggaggtaggtcaccatcgcccctccgtgatacctcgcggcaatcctgaccagaacctcgcgac- +-----actacaggccttcccaccttcttgccagattagtgcctatcaccagttagctgaggaactcggccac +cgccctgctcccgtcgccgctgtcttgcccccctgccccgagcttgagcaaggcttattatatatgccgcag +gagcttacggtgtctgacagcgtgctggtctttgaactcacggacatagtccactgccggatggctgcccct +agccagcggaaggccgtcctatccacgctcgtgggtaggtacggccgtcggacgaagctgtatgaagcagct +cattcagacgtccgtgagtccctggctagattcatccccaccattgggcccgttcaggctactacgtgtgag +ttgtatgagctggttgaggccatggtggagaaaggtcaggatggctctgccgtgcttgagctcgacctctgc +aatcgtgatgtatcgcgtatcacatttttccagaaagattgtaacaaatttaccacaggggagaccatcgcc +cacggtaaggtcggccagggcatctcggcttggagtaagaccttctgtgccttgtttggtccgtggttccgt +gctattgaaaaagaaatactagccctgctcccgcctaatattttctacggcgactcatacgaggagtctgtg +tttgccgccgctgtgtcaggggcaggttcaagcatg---gtatttgagaatgatttttcagagtttgatagc +acccaaaataacttctccct------------------tggtcttgagtgtgtagtcatggaggagtgtggc +atgccccagtggctaatccggttgtaccatttggttcggtcggcctggatcctacaggcaccgaaggagtct +cttaagggattttggaagaagcactctggtgagcccggcaccctcctctggaatactgtttggaatatggcg +atcatagcacactgctatgaatttcgtgattttagggttgccgctttcaagggggatgattccgtggtcctt +tgtagcgactaccgtcagagccgcaatgcagcggccctgattgcaggttgcgggctcaaactgaaggttgat +taccgccctattgggttgtatgctggtgtggtggtggcccctggtctggggacgctacctgatgtggtgcgc +tttgccggccggctatctgagaagaactggggccctgggcctgagcgggctgagcagctgcgcctagctgtt +tgtgacttccttcgaaggttgacgaatgttgcgcaggtatgtgttgatgttgtatcacgag-------tcta +tggagttagccctgggttggtacataaccttattggcatgctgcaaactatagctgatggcaaagcccattt +cacagagactgttaaacctgtgcttgacctcacgaactctatcatacagcgggtagaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgttgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtaccgcaatccgggactggagctcgccctc +gacagccaccccg---------------tcccctcggctcctcttggcgtgatcagtccca----------- +------gcgcccctccgctgtcccacgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgccatatcacctgcccccgatacagcccctgtgcctgatgttgactcgcgcggcgccatattgcgacgcca +gtacaatctatccacatccccgctcacatcatctgttgcttcgggtactaatttggtcctttatgctgcccc +gttaaaccccttgctgccccttcaggatggcactaacactcacattatggctactgaggcatctaattatgc +ccagtatcgggttgtccgagccacaatccgttacaggccactggtgccaaatgctgtcggaggttatgcaat +atccatctcattctggcctcagactactactacccccacgtctgttgatatgaactctattacttctactga +tgttaggattctagttcagcccggcattgcttctgagttggttatccctagtgagcgcctccattatcgtaa +ccagggctggcgctctgtggagacctcgggtgtggctgaagaggaggctacctctggcttggtaatgctttg +tatccatggctctcctgttaattcctacaccaataccccctataccggggcgcttggactccttgatttcgc +cctagaacttgagtttaggaacctgacgcccgggaacaccaacacccgtgtgtcccggtatacaagtacagc +ccgtcatcggctgcgtcgcggtgctgatggcaccgccgaacttaccactacagcggccacgcgcttcatgaa +ggacttgcacttca---ccggcacgaat---ggggtcggtgaggtgggccgtggtatagctctcacactctt +taatcttgctgacacgcttctcggtggtttgccgacagaattaatttcgtcggctgggggacagttatttta +ctcccgccccgtcgtctcagccaatggcgagccgactgtcaagttatatacatctgtagagaatgcgcagca +ggataaagggatcgctattccacatgacatagatctgggtgactcccgcgtggtcatccaggactatgacaa +ccagcatgagcaggatcgacccaccccctcgcctgccccttctcgccctttttcggtccttcgcgctaatga +tgttttatggctttc-----------------------------tctcactgccgccgagtacgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctcggatactgttacatttgt---caacgtggct +acaggagcccaggctgtcgcccgttcccttgattggtctaaagtcactctggatggccgccctcttaccact +at-----ccagcagtactccaaaacattttatgttc-taccgcttcgcgggaagttatctttctgggaggcc +gggacgactaag--gccggctacccctataattacaacacaactgctagtgatcagattctgattgaaaatg +cggctggtcat------cgtgttgctat-ttccacgtataccaccagcttggg--------------cgctg +gccctgtgtctgtttc-tgcggtcggtgttttagccccacattcggcccttgcagtccttgaagacactatt +gact---------accctgcccgtg----cccacactttcgatgatttttgcccggaatgtcgtgctc---t +tggtttacaggggtgtgctttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaatcaa-tt----t--cctt---t------gt +gccc-cct--------tc-atag-cttt-----gc-tt---t----------------attt-t-------t +tcttttct----gc----------------ggtccgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaa----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH504125.1/17229/1-7229 |Hepeviridae isolate HEV_39_Aylesbury_UK_080115, complete genome +-------------------------------------cgtatg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtgattcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagttggttttccgtcctgaggtgctctggaatcatcctatccaacgggt +tatccataatgaacttgaacagta---ctgtcgggccc-gggctggtcgttgcctagagattggggcccacc +caagatctattaatgacaacccaaatgttctgcaccggtgctttctacgaccagttgggagagatgttcagc +gctggtactctgctcctacccgtggccctgcggctaactgccgccgttctgccctgcgtggtctcccccccg +ttgatcgtacctactgttttgatgggttttctcgctgctcatttgctgcagaaactggggttgctctttact +ctctgcatgacctctggccggccgatgttgcggaggctatggcccgacacgggatgacacgcctgtatgctg +cactacatctc-cctcctgaagtactactaccacctggtacttaccatacaacttcataccttctgattcac +gacggtgatcgtgctgttgtgacctatgaaggtgatactagtgcaggctacaaccatgatgtctccatactt +cgtgcatggatccgcacaactaaaatagtcggcgaccatccgctggtgatagagcgtgtgcgggctattggc +tgccattttgtgctgttgcttactgcagcccctgagccgtcgccaatgccttatgttccatatccccggtcg +acagaggtgtatgtccgctctatattcggccctggc---------gggtccccatctctattcccatctgct +t----------gctctacgaagtcca-catttcacgccgtcccggttcatatctgggaccggctcatgctct +ttggcgcaactttggatgatcaggcattttgctgttcacggcttatgacctacctccgcgggattagttaca +aggtcactgttggtgcccttgtcgctaacgaagggtggaatgcttcggaggacgctcttaccgctgttatta +ctgcagcgtacctgaccatttgtcatcagcgctacctccgtactcaagctatatctaagggtatgcgccgac +tggaggttgagcatgcccaaaaattcattacaagactttatagttggctgtttgagaagtc---------cg +gccgtgactatatccccggtcgccagctccagttctacgcacagtgccgccgttggttatcggcgggttttc +atcttgaccctagggtgcttgtttttgatgagtctgtgccctgc---cgttgtaggacattccttaagaa-- +----ggctgtgggtaagttctgctgttttatgaagtggttaggacagga------gtgcacctgctttttgg +----------------aaccagcagagggtctagttggcgaccatggc--------cacgataatgaagcct +atgagggctctgaggtcgatcaggctgagcccgcctacctcgatgtttctgggacttacgccgtccatggcc +gccaacttgaggccctgtatagggcgcttaacatcccgcatgacattgctgcccgagcctctcgtttgactg +ccaccgtcgaactcgttgcaagtccagaccgtttggagtgccgcactgtgctcgggaataagacttttcgga +cgacggtggttgatggcgcccatcttgaggcgaacggccc------------------------cgagcagt +acgttctttcgtttgacgcctctcgccagtctatgggggccgggccgcatagtctctcctatgagctcaccc +ctgctggtttgcaggtcaagatttcatct-------aatggcctggactgcactgcaacattccct---ccg +ggcggggcccctagcgctgccccgggggaagtagcagccttttgcagtgccctttacaggtacaacaggttc +actcagcgccattcgcttataggtggcctgtggctgcatcctgaggggttgttgggtatcttcccccctttc +tcccccgggcacctttgggagtccgctaatcctttttgtggggagggaaccctgtacacccgaacatggtca +acatctggcttttctagtgacttttccccccctgaggcagccgttgcagcgccggctgctactcc----ggg +gttacgcc---accctacaccccctgttagtgacat-----------------ctgggtgtt---------- +---------accgccgcct----tctgaagaat--------------ttcaggctgacacagtgcccgctcc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcccgctcaaccatctagc +tccgctgggccaaag-------------------------------------gctcccgtgcgtaagccgcc +aacgccacc--------------------------------------atccccgcgcacccgccgcc----- +-------------------ttctttacacctatccggatggggcaaaggtgtatgcggggtcactgtttgag +tctgactgtgattggctggttaatgcgtcgaatcccggccatcgtcctgggggcggcctttgtcatgccttc +taccaacgcttccccgagtctt------tccacccaactgagtttattatgcgcgatgg---tcttgccgcg +tatactttaactccccggcctatcatccatgcagtggctcctgactatagggttgagcataacccaaagagg +cttgaggcagcataccgagagacctgctcccgccgcggtaccgccgcctacccactcctcggctcaggtata +taccaagttcccgtcagcctcagctttgacgcttgggagcgtaaccaccgccccggggacgagctctaccta +accgaccccgcagctacc-------------------------------------------------tggtt +cgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------gccggccctcacaataactgaggatgcagc +cc------------gtacagccaacctggcactggagatcg------------atgctgctacggaggtcgg +ccgggcttgt---gccggttgtgcagttagtcctggggttgttcactatcagtttactgctggggtcccagg +ttcggggaagtcgcgttctatacagcagggggatgttgacgtagtggttgttcccactcgggagctccggaa +tagttggcgccgccggggtttcgcagcttttacaccacatacggcggcccgtgtcactacgggccgtcgtgt +tgtaattgatgaggccccatctctcccaccgcatttgctgctgctacatatgcagcgggcctcgtcggtcca +ccttctcggcgacccgaaccagatccctgccatagacttcgagcatgccggcctggtccccgcaatacgccc +tgagcttgcgcctaccagttggtggcatgttacccaccgctgccccgctgatgtgtgcgagcttatacgcgg +ggcttatcctaaaattcaaaccactagccgtgtgctgcggtctttattctggaatgag------cctgccat +tggccagaagctggttttcacccaggctgctaaggccgccaacccaggtgcgattacagtccacgaggccca +gggcgccactttcacggaaactacaatcatagccacggctgacgctagggggctcatccaatcttcccgagc +tcatgccatagtcgcacttacccgccacacagagaagtgcgttattcttgacgcccccggcttgttacgtga +ggttggtatatcggatgtgattgttaacaatttt------------------------------ttcctcgc +cggcg--gggaggtgggtcaccatcgcccctctgtgatacctcgcggtaatcctgaccagaacctcgccac- +-----attacaggcctttccaccttcctgccagattagtgcctatcaccagttagccgaggaacttggccac +cgcccagcccccgtcgccgctgtcttgcccccctgccctgaacttgagcagggcttgttatatatgccgcag +gagcttacggtgtcagatagcgtgttggtctttgaactcacggacatagtccactgccggatggctgccccc +agccagcggaaggccgtcctatcgacgctcgtgggtaggtacggccgtcggacgaagctgtatgaagcagct +cactctgacgtccgtgagtccctggctaggttcatccctaccatcgggcccgttcaggcgactacgtgtgag +ttatatgagctggttgaggctatggtggagaaaggtcaggacggctctgccgtgcttgagctcgacctctgc +aatcgtgatgtatcgcgtatcacatttttccagaaagattgtaataaattcaccacaggggagaccattgcc +cacggcaaggtcggccaaggcatttcggcttggagtaagaccttctgtgccctgtttggtccgtggtttcgt +gctattgaaaaagaaatactagccctgctcccgcctaatattttctacggcgacgcatacgaggagtctgtg +tttgctgccgctgtgtcaggggcaggttcaagcatg---gtatttgagaacgatttttcagagtttgatagc +acccaaaataacttctccct------------------tggtctcgagtgtgtggtcatggaggaatgtggc +atgccccagtggttaattcggttgtaccatttggttcggtcagcctggatcctacaggcgccgaaggagtct +cttaagggattttggaagaagcattctggtgagcccggcaccctcctttggaatactgtttggaatatggcg +atcatagcacactgctatgaatttcgtgattttagggttgccgcttttaagggagatgattccgtggtcctc +tgtagcgactatcgtcagagccgcaacgcagcggccctgattgcaggttgcggactcaaactgaaggttgat +tatcgccctattgggttgtatgctggtgtggtggtggcccctggcttggggacgctacccgatgtggtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggctgagcaattgcgcctagctgtt +tgtgacttccttcgagggttaacgaatgttgcgcaggtgtgtgtcgatgttgtatcccgag-------ttta +tggagttagccctgggttggtacataaccttattggcatgttacaaaccatagctgatggcaaagcccactt +tacagagactgttaaacctgtgcttgacctcacgaactctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcctcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtatcgcaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgtgatcagtccca----------- +------gcgcccctccgctgtcccacgccgtcgatctgcccca---------gctggggctgcgccgctgac +tgccatatcacctgctcctgatacagctcctgtacctgatgttgactcgcgcggcgccatattgcgacgcca +gtacaatttatctacatctccgcttacatcatctgttgcttcgggtactaatctggttctctatgctgcccc +gctaaatcccttgctgcccctacaggatggcactaacactcacatcatggccactgaggcatctaattatgc +ccagtatcgggtcgtccgagctacgatccgttataggccactggtgccaaatgctgtcggtggttatgcaat +atccatctcattctggcctcagactactactacccccacgtctgttgatatgaactctattacttccactga +tgttaggattttagtccagcctggcattgcttctgagttggttatccctagtgagcgcctccattatcgtaa +ccagggctggcgctctgtggagacctcgggtgtggctgaggaggaggctacttctggtttggtaatgctttg +tatccatggctcccctgttaattcctataccaataccccctataccggggcgcttggactccttgacttcgc +tttagagcttgagtttaggaacctgacacccgggaacaccaacacccgtgtgtcccggtacacaagcacagc +ccgtcatcggctacgtcgcggtgctgatggcaccgccgaacttaccactacagcagccacgcgcttcatgaa +ggacctgcacttca---ccggtacgaat---ggggttggtgaggtgggtcgtggtattgctctcacactctt +taatcttgctgacacgcttctcggtggcttgccgacagaattaatttcgtcggctgggggacagttattcta +ctcccgccccgtcgtctcagccaatggcgagccgactgtcaagttatatacatctgtagagaatgcgcagca +ggataaagggatcgctatcccacatgacatagatctgggtgactcccgtgtggtcatccaagactatgacaa +ccagcatgaacaggatcggcccaccccctcacctgccccttctcgccctttttcggttcttcgcgctaatga +tgttctatggctttc-----------------------------tcttactgccgccgagtacgac------ +cagactacatatgggtcgtccaccaacccgatgtacgtctcggatactgtcacatttgt---caacgtggct +acaggagctcaggctgtcgcccgttctctcgactggtctaaagttactctagacggccgccctcttactact +at-----ccagcagtattccaaaacattttatgttc-tcccgcttcgcgggaagctatctttctgggaggcc +gggacgactaag--gccggctacccctataattacaatacaactgctagtgatcagattttgattgaaaatg +cagctggccat------cgtgttgctat-ttccacgtataccaccagcttggg--------------cgccg +gccctgtctctgtttc-tgcagtcggagttttagctccacattcagctcttgcagtccttgaagatactatt +gact---------accctgcccgcg----cccatacttttgatgatttttgcccggagtgtcgtgccc---t +tggtttgcaggggtgtgccttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattaa-tt----t--cctt---t------gt +gccc-cct--------tc-atat-cttt-----gc-tt---t----------------attt-t-------c +tcttttct----gc----------------ggttcgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaa----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH504127.1/17221/1-7221 |Hepeviridae isolate HEV_37_Gloucester_UK_080115, complete genome +---------------------------------cca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaaccgagattct +tattaatttaatgcaaccccggcagttggtttttcgacctgaagtgctctggaatcatcctatccaacgggt +tatccataatgaacttgaacagta---ctgtcgggccc-gggctggtcgttgtttagaggttggggcccacc +caagatccattaatgacaacccaaatgttctgcaccggtgctttctacgaccagttgggagagatgttcagc +gctggtactctgcccctacccgcggccctgcggctaactgccgccgttctgccttgcgtggcctcccccccg +ttgatcgtacctattgttttgatggtttttcccgctgctcatttgccgcagagactggggttgccctttatt +ctttgcatgacctctggccggccgatgttgcggaggctatggcccgacacgggatgacacgcttgtatgctg +cactacatctc-ccccctgaagtactactaccacccggtacttaccatacaacttcataccttctgattcac +gatggtgatcgtgctgttgtgacctatgaaggtgatactagtgcaggctacaaccatgatgtttccatactt +cgtgcatggatccgcacaactaagatagtcggcgaccatccgctggtgatagagcgtgtgcgggctattggc +tgccattttgtgctgctgcttactgcagcccctgagccgtcaccaatgccttatgtcccatacccccggtcg +acagaggtgtatgtccgctctatatttggccctggc---------gggtccccatccctattcccatcagct +t----------gctctacgaaatcta-catttcacgctgtcccggttcatatttgggaccggctcatgcttt +ttggtgctactctggatgatcaagcgttttgctgttcacggcttatgacctacctccgcgggattagttaca +aggttactgttggcgcccttgtcgctaatgaggggtggaatgcttcggaggacgctcttaccgctgttatta +ctgcagcgtatttgaccatctgccatcagcgttacctccgtactcaagctatatccaagggtatgcgccgat +tggaggttgagcatgctcaaaaattcattacaagactttatagctggctgttcgagaagtc---------cg +gccgtgactatatccccggccgccagctccagttctatgcacagtgccgccgttggctatcggcgggttttc +atcttgacccaagggtgcttgtttttgatgagtctgtgccctgc---cgttgtaggacatttctcaagaa-- +----ggctgtaggcaagttctgctgttttatgaagtggctgggacagga------gtgcacctgctttttgg +----------------aaccagcagagggtctagttggcgaccatggc--------cacgataatgaagctt +atgagggctccgaggtcgatcaggccgagcccgcccatctcgatatttctgggacttatgccgtccatggcc +gtcaacttgaggctctgtacagggcgcttaacatcccgcatgacatcgctgcccgagcctcccgtttaactg +ccaccgtcgaacttgttgcaggtccagaccgcttggagtgccgcactgtgcttgggaataagactttccgga +cgacggtggttgatggcgcccatcttgaggcgaacggccc------------------------cgagcagt +acgttctctcgtttgacgcctctcgccagtctatgggggccgggccgcatagtctttcctacgagctcactc +ctgctggtttgcaggtcaagatttcatct-------aatggcctggattgcactgcaacattcccc---cct +ggtggggcccctagcgctgctccgggggaggtggcagccttttgcagtgctctttacaggtacaatagattc +actcagcgccattcgcttgtgggtggcttgtggctgcatcctgaggggttgctgggtatcttcccccctttc +tctcccgggcacctttgggagtccgctaatcctttttgtggggagggaaccttgtacacccggacatggtca +acatctggtttttctagtgacttttccccccctgaggcagccgtcgcagcgccggctgctactcc----ggg +gttatgcc---accctacacctcctaatagtgccat-----------------ttgggtgtt---------- +---------accgccacct----tctgaagaat--------------ttcaggctgacacagcgcccgcccc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tccctgagcccgttcaaccatctagc +cccgctgggccgaag-------------------------------------gcccccgtgcgtaagccgcc +aacgtcgcc--------------------------------------acccccgcgcacccgccgcc----- +-------------------ttctttacacctatccggatggggcaaaggtgtatgcggggtcactgtttgag +tctgattgtgactggctggttaatgcgtcgaatcccggccatcgtcctggcggcggcctttgccatgccttc +tatcaacgctatcccgagtctt------tccacccaactgagttcattatgcgcgacgg---tcttgccgcg +tacactttaactccccggcctattatccatgcagtggcccctgattatagagttgagcataacccaaagagg +cttgaggcagcataccgagagacttgctctcgccgcggcaccgccgcctacccactcctcggctcgggcata +taccaagtccccgtcagcctcagctttgacgcttgggagcgtaaccaccgccccggggacgagctctaccta +accgacctcgccgccacc-------------------------------------------------tggtt +tgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------gccggcccttacaataactgaggatgcagc +cc------------gcacagccaacctagcgctggagattg------------atgctgctacggaggtcgg +ccgggcctgt---gccggctgtgcagttagtcctggggttgtgcactatcagtttactgccggggtcccagg +ttcggggaagtcgcgctctatacagcagggggatgttgatgtagtggttgtccccactcgggagctccggaa +tagttggcgtcgccggggttttgcagcttttacacctcatacggcggcccgtgttaccacgggccgtcgtgt +tgtgattgatgaggccccatcccttccgccgcacttgttgctattacacatgcagcgggcctcgtcggtcca +cctcctcggcgacccaaaccagatccctgctatagacttcgagcacgccggcctggtccccgcaatacgccc +tgagcttgcacccaccagttggtggcatgtcacccaccgctgccccgctgacgtgtgcgagcttatacgcgg +ggcttaccccaaaatccaaaccactagccgcgtgctgcggtctttattttggaatgag------cctgccat +cggccagaagttagtttttactcaggctgctaaggccgccaaccctggtgcgatcacagtccacgaggccca +gggcgccactttcacggaaactacaatcatagccacagctgatgccagggggctcatccaatcttcccgagc +gcatgccatagttgcacttacccgccacacagagaagtgcgttattcttgatgcccccggcttgttacgtga +ggttggtatatcggatgtgattgtcaacaacttc------------------------------ttccttgc +cggtg--gagaggtgggtcaccatcgcccctcagtgatacctcgcggtaatcctgaccagaacctcgcgac- +-----actacaggcctttccaccttcttgccagattagtgcctatcaccagttagctgaggagcttggccac +cgcccagctcccgtcgccgctgtcctgcccccttgccctgaacttgagcaaggcttattatatatgccgcag +gagcttacggtgtctgatagcgtgctggtctttgaactcacggacatagtccactgccggatggctgcccct +agccagcggaaggccgtcctatcgacgctcgtgggtaggtacggccgtcggacgaagctgtatgaagcagct +cactctgacgtccgtgagtccctggctagattcatccccaccattgggcccgttcaggccactacgtgtgag +ttgtatgagctggttgaggccatggtcgagaagggtcaggacggctctgccgtgcttgagctcgacctctgc +aatcgtgatgtatcgcgtatcacatttttccagaaagattgtaataaattcaccacaggggagaccattgcc +cacggtaaggtcggccagggcatctcggcttggagtaagactttctgtgccctgtttggtccgtggtttcgt +gctattgaaaaagaaatactagccctgctcccgcctaatatcttctacggtgacgcatacgaggagtctgtg +tttgccgccgctgtgtcaggggcaggctcaagcatg---gtatttgagaatgatttttcagagtttgatagc +acccagaataacttctccct------------------tggcctcgagtgtgtagttatggaggaatgtggc +atgccccagtggctaatccggttgtaccatttggttcggtcggcctggattctacaggcaccgaaggagtct +cttaagggattttggaagaagcactctggtgagcccggtaccctcctttggaacactgtttggaatatggcg +atcatagcacactgctatgagtttcgtgatcttagggttgccgctttcaagggagatgactccgtggtcctc +tgtagcgactaccgtcagagccgcaatgcagcggccctgattgcaggttgcgggctcaaactgaaggttgat +tatcgccctatcgggttgtatgctggtgttgtggtggcccctggtctggggactctacccgacgtggtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggctgagcagttgcgcctagctgtt +tgtgatttccttcgagggttaacgaatgttgcgcaggtatgtgtcgatgttgtatcccgag-------ttta +tggagttagccctgggttggtacataaccttattggcatgctgcaaaccatagctgatggcaaggcccattt +tacagagactgttaaacctgtgcttgacctcacgaactctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtaccgcaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccacgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgccatatcacctgcccccgatacagcccctgtgcctgatgtcgactctcgcggcgccatattgcggcgcca +gtacaatttatccacatccccgcttacatcatctgttgcttcgggtactaatttggttctttatgctgcccc +gctaaaccctttgctgccccttcaggatggcactaatactcacatcatggccactgaggcatctaattatgc +ccagtatcgggttgtccgagctacgattcgttacaggccattggtgccaaatgctgtcggcggttatgcaat +atccatctcattttggcctcagactactactacccccacgtctgttgacatgaactctattacttccactga +tgttagaattctagttcagcccggcattgcttctgagttggttatccctagtgagcgcctccattatcgtaa +ccagggctggcgctctgtggagacctcgggtgtggctgaagaggaggctacttctggtttggtaatgctttg +tatccatggctctcctgttaattcctacaccaataccccctacactggggcgcttgggctccttgattttgc +tttagagcttgagtttaggaacctgacacccgggaacaccaacacccgtgtgtcccggtatacaagcacagc +ccgtcatcggctgcgccgcggcgctgatggcaccgcggagcttaccaccacagcggccacgcgcttcatgaa +ggacttgcacttca---ccggtacgaat---ggggtcggtgaggtgggtcgtggcattgctctcacactctt +taatcttgctgacacgcttctcggtggtttgccgacagaactaatttcgtcggctgggggacagttatttta +ctcccgccccgtcgtctcagccaatggcgagccgactgtcaagctatatacatctgtagagaatgcgcagca +ggataaagggatcgctattccacatgatatagatctgggtgactcccgtgttgtcatccaagactatgacaa +ccagcatgagcaggatcgacccaccccctcgcctgccccttctcgccctttttcggttcttcgtgctaatga +tgttttatggctttc-----------------------------tcttactgccgccgagtatgac------ +cagactacatatgggtcgtctaccaacccgatgtatgtctcggatactgtcacatttgt---caacgtggct +acaggagcccaggctgtcgcccgttcccttgactggtctaaagttactctggacggccgccctcttactact +at-----ccagcagtactctaaaacattttatgttc-tcccgcttcgcgggaagttatctttctgggaggcc +gggacgactaag--gctggttacccctataattataatacaactgccagtgatcagattctgattgaaaatg +cggctggtcat------cgtgttgctat-ttccacgtataccaccagcttggg--------------cgctg +gccctgtgtctgtttc-tgcagttggtgttttagccccacattcggcccttgcagtccttgaagacactatt +gact---------accctgcccgtg----cccacactttcgatgatttttgcccggagtgtcgcgctc---t +tggtttgcaggggtgtgccttccagtc--------cactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaatcaa-tt----t--tctc---t------gt +gccc-cct--------tc-atag-cttt-----gc-tt---t----------------attt-c-------t +ttttttct----gc----------------ggttcgcgctccctg---------------------gaaaa- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH504128.1/17231/1-7231 |Hepeviridae isolate HEV_36_Brighton_UK_070115, complete genome +---------------------------gcag-acca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagctggtttttcgacctgaagtgctctggaatcatcctatccaacgggt +tatccataatgaacttgagcagta---ctgtcgggccc-gggctggtcgttgtctagaggttggggctcacc +caagatccattaatgacaacccaaatgttctgcatcggtgctttctacgaccagttgggagagatgttcagc +gctggtactctgctcctactcgtggccctgcggctaactgccgccgttctgccttgcgtggcctcccccccg +ttgatcgtacctattgttttgatggattctcccgctgctcatttgccgcagaaaccgggattgccctctatt +ctctgcatgacctctggccggccgatgttgcggaggctatggcccgacacgggatgacacgcttgtatgctg +cactacatctc-ccccctgaagtactactaccacctggcacataccatacaacttcataccttctgattcac +gacggtgatcgtgctgttgtgacctatgagggtgatactagtgcgggctacaaccatgatgtttccatactt +cgtgcatggatccgcacaactaagatagtcggcgaccatccgctggtaatagagcgtgtgcgggctatcggc +tgccattttgtactgttgcttactgcagcccctgagccgtcaccaatgccttatgttccatacccccggtcg +acagaggtgtatgtccgctctatattcggccctggc---------gggtccccatccctattcccatcagcc +t----------gctctacgaaatcta-cattccatgctgtcccggttcatatttgggaccggctcatgcttt +ttggcgctaccctggatgatcaggcgttttgctgttcacggcttatgacctacctccgtgggattagttaca +aggtcactgttggcgcccttgtcgctaatgagggttggaatgcatcggaggacgctcttaccgctgtcatca +ctgcagcgtatttgaccatctgccatcagcgttacctccgtactcaagctatatccaagggtatgcgccgac +tggaggttgagcacgcccaaaaatttattacaagactttatagctggctgtttgagaagtc---------cg +gccgtgactatatccccggtcgccagctccagttttatgcacagtgccgccgttggttatcggcgggtttcc +atcttgatccaagggtgcttgtttttgatgagtctgtgccctgc---cgttgtaggacatttcttaagag-- +----ggctgtgggtaagttctgctgttttatgaagtggttgggacagga------gtgcacctgctttctgg +----------------aaccagcagagggtctagttggcgaccatggc--------cacgataatgaagcct +atgagggctctgaggttgatcaggccgagcccgcccatcttgatgtttctgggacttatgccgtccatggcc +gccaacttgaggccctgtatagggcgcttaacatcccgcatgacatcgcggcccgagcctcccgtttgactg +ccaccgtcgaacttgttgcaggtccagaccgcttggagtgtcgcactgtgctcgggaataagactttccgga +cgacagtggttgatggcgcccatcttgaggcgaacggccc------------------------tgagcagt +acgttctttcgtttgacgcctctcgtcagtctatgggggccgggccgcatagtctctcctacgagctcactc +ctgctggtttgcaggttaagatctcatct-------aatggcctggattgcactgcaacatttccc---ccg +ggtggggcccctagcgctgctccgggggaggtagcagccttttgcagtgccctttacaggtacaacaggttc +actcagcgccattcgcttataggtggcttgtggctgcatcctgaggggctattgggcatctttccccctttc +tctcccgggcacctttgggagtctgctaaccctttttgcggggagggaaccttgtacacccggacatggtca +acatctggtttttctagcgacttttccccccctgaggcagccgtcgcagcaccggctgctactcc----ggg +gttgcgcc---actctacacctcctgctagtgatat-----------------ctgggtgtt---------- +---------accgccacct----tctgaagaat--------------tccaggttgacacagcgccagcccc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tccctgagcccgctcaaccatctaac +cccgctgggccaaag-------------------------------------gctcccgtgcgtaagccgcc +tacgccacc--------------------------------------acccccgcgcacccgccgcc----- +-------------------ttctttacacctatccggacggggcaaaggtgtatgcggggtcactgtttgag +tctgactgtgattggctggttaatgcgtcgaatcccggccatcgccctggcggcggcctttgccatgctttc +tatcaacgctaccccgagtctt------tccacccaactgagtttattatgcgcgacgg---tcttgccgcg +tacactttaactccccggcctattattcatgcagtggcccctgattatagggtcgagcataacccaaagagg +cttgaagcagcataccgagagacttgctctcgccgtggtaccgccgcctacccactcctcggctcgggcata +taccaggttcccgtcagcctcagctttgacgcttgggagcgtaatcaccgccccggggacgagctttaccta +accgacctcgccgctacc-------------------------------------------------tggtt +tgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------gccggccctcacaataactgaggatgcagc +cc------------gcacagccaacctagcactggagatcg------------atgctgctacggaggtcgg +ccgggcttgt---gccggctgtgcagttagccccggggttgtgcactatcagtttactgccggggtcccagg +ctcggggaagtcgcgctcaatacagcagggggatgttgacgtagtggttgttcccactcgggagctccggaa +tagttggcgtcgtcggggtttcgcagcttttacacctcatacggcagcccgtgtcaccacgggccgtcgtgt +tgtgatcgatgaagccccatccctcccaccgcatttgttgctactacacatgcagcgggcttcgtcggtcca +tcttctcggcgacccaaaccagatccctgccatagactttgagcacgccggcctggtccccgcaatacgccc +tgagcttgcgcccaccagttggtggcatgttacccaccgctgccccgctgatgtgtgcgagcttatacgcgg +cgcttacccaaaaatccagaccactagccgcgtgctgcggtctctattctggaatgaa------cctgccat +cggccagaagttagttttcacccaggctgctaaggccgccaaccccggtgcgatcacagtccacgaggccca +gggcgccacttttacggaaactacaatcatagccacagctgatgccagggggctcatccagtcttcccgagc +tcatgccatagttgcacttacccgccacacagagaagtgcgttattcttgacgcccccggcttgttacgtga +ggttggtatatcggatgtgattgtcaacaatttt------------------------------ttcctcgc +cggtg--gggaggtgggtcaccatcgcccctctgtgatacctcgtggtaaccctgaccagaacctcgcgac- +-----actacaggcctttccaccttcttgccagattagtgcctatcaccagttagctgaggaacttggccac +cgtccagctcccgtcgctgctgtcttgcccccctgccctgaacttgagcaaggcttattatatatgccgcag +gagcttacggtgtctgatagtgtgctggtctttgaactcacggacatagtccactgccggatggctgcccct +agtcagcggaaggccgtcctatcgacgctcgtgggtaggtacggccgtcggacgaagctgtatgaagcggct +cactctgacgtccgtgagtccctggctagattcatccccaccattgggccagttcaggctactacgtgtgag +ttatatgagctggttgaggccatggtggagaagggtcaggatggctctgccgtgcttgagctcgacctctgc +aatcgtgatgtatcgcgtatcacatttttccagaaagattgtaataaattcaccacaggggagaccattgcc +cacggtaaggtcggccagggcatctcggcttggagcaagaccttctgtgccctgtttggcccatggtttcgt +gctattgaaaaagaaatactagccttgctcccgcctaatatcttctacggcgacgcatacgaggagtctgtg +tttgccgccgctgtgtcaggggcgggttcaagtatg---gtatttgagaatgacttttcagagtttgatagc +acccaaaataacttctccct------------------tggcctcgagtgtgtagttatggaggaatgtggc +atgccccagtggctaattcggttgtaccatttggttcggtcggcctggatcctacaggcaccgaaggagtct +cttaagggattttggaagaagcattctggcgagcccggcaccctcctctggaacactgtttggaatatggcg +atcatagcacactgctatgaatttcgtgattttagggttgccgcctttaagggagatgattccgtggtcctc +tgtagcgattaccgccagagccgcaatgcagcggccctgattgcaggttgcgggctcaaactgaaggttgat +tatcgccctatcgggttgtatgctggtgtggtggtggcccctggtttagggacgctacccgatgtggtgcgc +ttcgccggccggctgtctgagaagaactggggccctgggccggagcgggctgagcagttgcgcctagctgtt +tgtgatttccttcgagggttaacgaatgttgcgcaggtatgtgtcgatgttgtatcccgag-------ttta +tggagttagccctggattggtgcataaccttattggcatgctgcaaaccatagctgatggcaaagcccattt +tacagagactgttaaacctgtgcttgacctcacgaactctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccacgc---------------------------------- +-caccgg------ccggccagccgcctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtaccgcaacccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgtgatcagtccca----------- +------gcgcccctccgctgccccacgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgccatatcgcctgctcccgatacagcccctgtgcctgatgttgactcgcgcggcgccatactgcggcgcca +gtacaatctatccacatctccgctcacatcatctgttgcttcgggtactaatctggttctttatgctgcccc +gctgaaccctttgctgccccttcaggatggcactaacactcacatcatggccactgaggcgtctaattatgc +ccagtatcgggttgtccgagctacgattcgttacaggccattggtgccaaatgctgtcggtggttatgcaat +atccatctcattttggcctcagactaccactacccccacgtctgttgatatgaactctattacttctactga +tgttaggattctagttcagcccggcattgcttccgagttggttatccccagtgagcgcctccattatcgtaa +ccagggctggcgctctgtggagacctcgggtgtggctgaagaagaggctacttctggtttggtaatgctttg +tatccacggttcccctgttaattcctacaccaataccccctataccggggcgcttggactccttgatttcgc +tttagagcttgagtttaggaacctaacacccgggaacactaacacccgtgtgtcccggtatacaagcacagc +ccgtcatcggctgcgccgcggtgctgacggcaccgctgaacttaccaccacagcggccacgcgcttcatgaa +ggacttgcacttca---ccggtacgaat---ggggtcggtgaggtgggtcgtggtattgctctcacactctt +taatcttgctgatacgcttctcggtggtttgccgacagaattaatttcgtcggctgggggacagttattcta +ttcccgccccgtcgtctcggccaatggcgagccgactgtcaagttatacacatctgtagagaatgcgcaaca +agataaaggaattgctatcccacatgacatagatctgggtgactctcgtgtggtcatccaagactatgataa +ccagcatgagcaggaccgacccaccccctcgcccgccccttctcgccctttctcggttcttcgcgctaatga +tgttctatggctttc-----------------------------tcttactgccgctgagtacgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctcggatactgtcacatttgt---caacgtggct +acaggagcccaggctgtcgcccgctcccttgactggtctaaagttactctggatggccgccctcttactacc +at-----ccagcagtactccaaaacattttatattc-tcccgcttcgcgggaagttatccttctgggaggct +gggacgactaag--gccggctacccctataattacaacacaactgctagtgatcagattctgattgaaaatg +cagctggtcat------cgtgttgctat-ttccacgtacaccaccagcttggg--------------cgctg +gccctgtgtctgtttc-tgcagttggtgttctagccccacattcggcccttgcagtccttgaagacactatt +gatt---------accctgcccgtg----cccacactttcgatgatttttgcccggagtgtcgcgctc---t +tggtttgcaggggtgcgccttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaatcaa-tt----t--cctt---t------gt +gccc-cct--------tc-atag-cttt-----gc-tt---t----------------attt-c-------t +ttttttct----gc----------------agttcgcgctccctg---------------------gaaaaa +aaaa-------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH504129.1/17237/1-7237 |Hepeviridae isolate HEV_35_Poole_UK_050115, complete genome +---------------------------gcag-acca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatcccgtgtgcaaactgagattct +tattaatttgatgcaacctcgacagctggttttccgacctgaagtgctctggaatcatccaattcaacgggt +tattcataatgaattagaacagta---ctgtcgggccc-gggctggtcgttgcctagaagttggggcccacc +caagatccatcaatgacaacccgaatgttttgcatcggtgctttctacgaccagttggaagggacgtccagc +gctggtactctgcccccacccgtggccctgcggctaattgccgccgctccgccctgcgtggccttccccctg +ttgatcgtacctactgttttgacgggttctcccgctgctcatttgctgcagaaactggggtggccctctact +ctctgcatgacctctggccggccgatgttgcggaggccatggcccggcacgggatgactcgcttatatgctg +cactacacctc-cctcctgaagtactactaccgccaggtacttaccatacaacttcataccttttgatccac +gacggcgatcgtgctgttgtgacctatgaaggtgacactagtgcaggctacaaccatgatgtttccatactc +cgcgcatggatccgcacaactaaaatagttggcgaccatccgctggtgatagagcgtgtgagggctattggc +tgccactttgtgctgctgcttactgcagcccctgagccgtcaccaatgccttatgtcccatatccccggtcg +acagaggtgtatgtccgctctatattcggccctggc---------gggtccccgtctcttttcccatcagct +t----------gctctacaaagtcca-catttcatgctgtcccagttcatatttgggaccggcttatgcttt +ttggcgccaccctggatgatcaggcgttttgttgctcacggcttatgacctacctccgtgggattagttaca +aggtcactgtcggtgccctcgttgctaacgaggggtggaatgcttcggaggacgcccttaccgctgttatta +ctgcggcgtacctgaccatctgccatcaacgctacctccgtactcaggctatatccaagggtatgcgccgac +ttgaggtcgagcatgctcaaaaatttattacaagactctacagttggctgtttgagaaatc---------tg +gccgtgactatatccccggtcgtcagctccaattctatgcacagtgccgccgctggttatcggcaggtttcc +accttgatccaagggtgcttgtttttgatgagtctgtgccctgc---cgctgcagaacgttccttaagaa-- +----ggttgcaggcaaattctgttgttttatgaaatggctgggacagga------gtgtacctgctttctgg +----------------aaccagcggagggcctggttggcgaccatggc--------cacgataatgaggcct +atgagggctctgaggtcgaccaggctgagcccgcccatctagatgtttctgggacttatgccgtccatgggc +gccaacttgaggccttgtatagggcgcttaacatcccacatgacatcgcggcccgagcctcccgtttaaccg +ccactgttgagctcgttgcaagcccggatcgcttggagtgtcgcaccgtgctcgggaacaagaccttccgaa +caacggtggttgatggcgcccatcttgaggcgaacggccc------------------------cgagcagt +acgtcctttcgttcgacgcctctcgtcagtctatgggtgccgggtcgcatagcctcacctatgagctcaccc +ctgctggcttgcaggttaggatttcatct-------aatggcctggattgcactgcgacattcccc---ccg +ggcggggcccctagcgccgctccgggggaggtggcagccttttgcagtgccctctacaggtataataggttt +acccagcggcattcacttacgggcggcttgtggctgcatcctgagggattattgggtatcttcccccccttt +tcccccgggcatctctgggagtccgctaatcctttttgcggggaggggaccttgtacacccgaacttggtca +acatctggtttttctagtgatttttcccccccggaagcagctgccgctgcgccggctgctgttcc----ggg +gttacccc---atcctacaccccctgttagtgatat-----------------ctgggtgtt---------- +---------gccgccaccc----tccgaagaac--------------ttcaggttgatgcagtgcctgcccc +tcctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tccccgagcctgctctatcgcccagc +cccgttgagccaggg-------------------------------------gtccccgtgcgtaagccggc +ggcatcacc--------------------------------------acctccgcgtacccgccggc----- +-------------------ttctttatacttatccggacggggcaaaggtgtacgcggggtcgttgtttgag +tctgactgtgactggttggttaatgcgtcgaaccctggtcatcgtcccggagggggcctttgccatgccttt +taccaacgctaccccgagtctt------tccatccgactgagttcattatgcgcgacgg---tcttgccgcg +tatactttaactccccggcctatcattcatgcagtagcccctgattatcgggttgaacagaacccaaagagg +cttgaggcagcatatcgagagacttgttcccgccgtggtaccgccgcttatccgctccttggttcgggcata +taccaagtcccggtgagcctcagctttgacgcctgggagcgtaaccatcgtcccggggacgagctttacctg +actgacctcgccgctacc-------------------------------------------------tggtt +cgaagctaataagccaacaca--------------------------------------------------- +------------------------------------------gccggccctcacgataactgaggatacagc +cc------------gtacggccaacctagcactggagatcg------------atgctgctactgaggttgg +tcgggcttgt---gccggctgtacagttagtcccggggttgtacactatcaatttactgccggggtaccagg +ttcggggaagtcgcggtctatacagcagggggatgtcgatgtggtggttgttcccactcgagagcttcggaa +cagctggcgccgccggggttttgcagcttttacacctcacacggcggcccgtgttaccaagggccgtcgcgt +tgtgattgatgaagccccttctctcccaccgcacttgctgctactacacatgcagcgggcctcgtcggtcca +tcttcttggcgacccaaaccagatccctgctatagacttcgagcatgctggtctggttcccgcaatacgccc +tgagcttgcgcctactagctggtggcatgttactcatcgttgccccgccgatgtgtgtgagctcatacgcgg +ggcctaccctaaaatccagactactagccgcgtgttgcggtcattattttggaatgag------cccgccat +tggccagaagttagtcttcacgcaggctgctaaggctgtcaaccctggtgcgattacagtccatgaggccca +gggtgccacctttacggagaccacaatcatagccacggctgatgctagggggctcattcaatcttcccgggc +tcatgctatagtcgcactcacccgccatacagagaagtgcgttattcttgacgcccccggcttgttacgaga +agttggtatctcggatataattgttaacaatttt------------------------------ttccttgc +cggcg--gggaagtgggccaccaccgcccctccgtgataccccgcggtagccctgaccagaacctcgctac- +-----actacaggccttcccaccttcctgtcagataagtgcttatcatcagttagctgaggaactaggccac +cgcccagcccccgtagctgccgtcctgcccccttgccctgagcttgagcagggcctgctgtatatgccgcaa +gagctcacggtgtcagatagcgtgttggtctttgaactcacggacatagtccactgccggatggccgcccct +agccagcggaaggccgtcctatcgacgcttgtgggtaggtacggccgtaggacaaagctgtatgaagcggct +cactctgacgtccgtgagtccctcgctagatttatccccaccattggacccgttcaggctaccacgtgtgag +ctatacgagctggttgaggccatggtggagaagggtcaggatggttctgccgtgcttgagctcgacctttgc +aatcgtgatgtatcgcgtatcacatttttccagaaagattgtaacaagttcaccacaggggagaccattgcc +catggtaaagtcggtcagggcatttctgcttggagtaagaccttttgtgccctgtttggcccgtggtttcgt +gctattgaaaaagaaatattagccctgctcccacccaatatcttttacggcgacgcgtatgaggagtctgtg +tttgctgccgccgtgtctggggcaggttcatccatg---gtatttgagaatgatttttcagagtttgatagc +actcaaaataacttttccct------------------tggtctcgagtgtgtaattatggaggaatgtggt +atgccccagtggctaatccggctgtaccatttggttcggtcggcctggaccctacaggcgccgaaggagtct +ctcaagggattttggaagaagcattctggcgagcccggcaccctcctttggaataccgtttggaatatggcg +atcatagcacactgctatgaattccgtgattttagggtcgccgcctttaagggggatgattcggtggttctc +tgcagcgactatcgtcagagccgcaatgcagcggctctgattgcaggttgcgggcttaaattgaaggttgat +tatcgccctatcgggttgtatgctggtgtggtagtggcccccggtttgggaacgctacccgatgtagtgcgt +tttgctggccggctgtctgagaagaactggggccctgggccggagcgggctgagcagctgcgccttgctgtt +tgtgatttccttcgagggctgacgaatgttgcgcaggtatgtgttgatgttgtatcccgag-------ttta +tggagttagccctgggctggtacataacctcattggtatgttgcaaaccattgctgacggcaaggctcactt +tacagagactgttaaacctgtgcttgaccttactaattctattatacagcgggtggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgttccgcaatccggggctggagctcgccctc +gacagccactccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccacgccgtcgatctgcccca---------actggggctgcgccgttgac +cgccacatcacccgcccctgatactgcccctgtacctgatgttgattcgcgcggcgctatattgcggcgcca +atataatctatctacatccccactcacgtcatctgttgcttcgggtactaatctggttctttatgctgctcc +gctaaaccctctgctgccccttcaggatggcactaacacccatattatggccactgaggcatctaattatgc +ccagtatcgggttgttcgagccacgatccgttataggccattggtgccaaatgctgttggtggctatgcaat +atccatttcattctggcctcagactactactacccctacgtctgttgatatgaattctattacctctactga +tgtcaggattctggtccagcccggtattgcttctgagttagttatccctagtgagcgcctccattatcgtaa +ccagggctggcgttctgtggagacttcgggtgtggcagaggaggaggccacctccggtttggtgatgctctg +tatccatggctcccctgttaactcttacaccaacaccccctataccggggcacttggactccttgattttgc +tttagagcttgagtttaggaatttgacacccgggaacaccaacacccgagtttctcggtacacaagcacagc +ccgtcaccggctgcgccgcggtgctgatggcaccgccgaacttaccactacagcggctacacgttttatgaa +ggacctgcatttca---ccggcacgaac---ggggtcggtgaggtgggccgtggtattgctctcacactctt +taatcttgctgatacgcttctcggtggtctgccgacagaattaatttcgtcggctgggggacagttgtttta +ctcccgccccgttgtctcagccaatggcgagccgactgtcaagctatatacatctgtggagaatgcacagca +ggataaggggattgccatcccacatgacatagacctgggtgactctcgtgtggtcattcaggactatgataa +ccagcatgagcaagatcggcccaccccttcgcctgccccatcccgtccgttctcggtccttcgtgctaatga +tgtcttatggctctc-----------------------------tctcaccgctgctgagtatgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctctgacactgtcacatttgt---caacgtggct +acaggggcccaggcagtcgcccgctcccttgactggtctaaagttactctggatggccgcccccttactacc +at-----ccagcagtactctaaaacattttatgtcc-tcccgcttcgtgggaagttgtccttctgggaggcc +gggacaactaag--gctggttacccctataactacaatacaactgctagtgaccagattttgattgaaaatg +cagccggtcac------cgtgttgctat-ttccacctatactaccagcctggg--------------cgctg +gtcctgtgtcagtttc-tgcagtcggtgtactagccccacattcggctcttgcagttcttgaggatactact +gatt---------accctgcccgcg----ctcatacttttgatgatttctgcccggagtgtcgcgccc---t +tggtctgcaggggtgtgccttccagtc--------tactatcgctgaacttcagcgtct------------- +--------caaaatgaaggtaggtaaaacccgggagttttaattaa-tt----t--cctt---t------gt +gccc-cct--------tc-atag-cttc-----gt-tt---t----------------attt-c-------t +tttcttct----gc----------------tgtccgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaa----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH504130.1/17206/1-7206 |Hepeviridae isolate HEV_34_Newcastle_UK_221214, complete genome +----------------------------------------------------------------tcgatgc- +---catggaggcccatcagtttatcaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggtccggccgtttttatctcgtgtgcaaaccgagattct +tattaatctgatgcaaccccggcaattggtcttccgccctgaggtgctttggaatcaccctatccagcgggt +tatacacaatgaattagaacagta---ctgccgggccc-gagctggccgttgcttggaggtcggggcccatc +caagatccattaatgataaccccaatgtcctgcaccggtgtttcctcagaccggtcggtcgagatgttcagc +gctggtactctgcccccacccgtggtcctgcggctaactgccgccgttccgcgttgcggggtctcccccctg +tcgaccgtacttactgctttgacggattttcccgctgctctttcgctgcagagactggtgtggccctttact +ctctgcatgacctttggccggccgatgttgcggaggctatggcccgccatgggatgacacgcctatatgccg +cactgcatcta-cctcccgaggtgctgctaccacccggcacttaccacacaacctcgtatctcctgatccac +gacggcgaccgcgctgttgtaacttatgagggcgatactagtgcgggctataaccatgatgtttccatactc +cgtgcgtggattcgtactaccaaaatagttggtgaccacccgttggttatagagcgtgtacgggccattggg +tgccattttgtgctgctgctcactgcagcccctgagccgtcacctatgccttatgtcccctaccctcgctca +acggaggtgtatgtccgatctatatttggccctggc---------ggctccccatctttgtttccgtcagcc +t----------gctccactaaatcta-ctttccacgctgtcccggttcatatctgggatcggctcatgctct +tcggtgccaccctggacgatcaggcattctgttgctcacggcttatgacttacctccgtggcattagctata +aggtcactgtcggtgcacttgttgctaatgagggctggaatgcctctgaagacgccctcacagcggtgatca +ctgcggcctacctgactatctgtcatcaacgttatctccgcacccaggcgatatccaagggcatgcgccggc +tggaggtcgagcacgcccagaaatttatcacaagactttacagttggttatttgagaagtc---------tg +gccgtgattacatccccggccgtcagctccagttttacgcgcagtgtcgacggtggttatctgcaggcttcc +atctggatcccagggtgcttgtttttgatgaatcagtgccctgc---cgctgccggacgtttttgaagaa-- +----agttgctggtaaattctgctgttttatgcggtggttagggcagga------atgtacctgctttttgg +----------------aaccagctgagggtttagttggcgatcagggc--------catgacaacgaggcct +atgagggttctgaggtcgacccagctgaacctgcacatcttgatgtctcggggacctacgccgtccacgggc +gccagcttgaggccctgtatagggcacttaacattccacaagatattgccgcccgagcgtctcgattaacgg +ctactgttgagctcactgcgggtccagaccgtctagagtgccgcactgtacttggaaacaagacctttcgga +cgacggtggttgatggcgcccaccttgaagctaacggccc------------------------tgagcagt +atgttctgtcgtttgatgccccccgccagtctatgggagctgggtcgcacaacctcacttatgagctcaccc +ctgccggcttgcaggtcaggatttcatct-------aatggcctggactgtatcgctacattcccc---cct +ggcggcgcccctagcgctgagccgggagaggtggcagccttctgtagtgccctttacagatacaataggttc +acccagcggcactcgctaactggtggattatggttacaccctgagggattgctgggtattttcccccctttt +tcccctgggcatatttgggagtctgccaaccccttttgtggggaggggaccttgtacacccggacttggtca +acatctggcttttctagtgacttctccccccctgaggctgtcgcccccgctccggctgctgcccc----agg +gtcgcccc---attctaccccgcctgttagtgatat-----------------ctgggtgct---------- +---------accaccgccc----tcagaggggt--------------ctcagcttgatgtggcacctgtgcc +cccta------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctcccgagcccgccggattgcccagt +cccattatgcctacc----------------------cccccccccccccccccccccgtgcgtaagccacc +agcaccccc--------------------------------------actatcccgcactcgccgtc----- +-------------------ttctctacacctaccccgacggcgctaaggtgtatgcagggtcgttgtttgag +tcaaattgtgactggttggtcaatgcctctaacccgggtcaccgccccgggggtggtctttgtcacgccttc +taccaacgtttcccagaagcgt------tctaccctactgaattcattatgcgtgaggg---tctcgcagca +tacaccctgaccccgcgccctattattcatgcagtggctcctgattacagggttgagcagaacccaaagagg +ctagaggcagcgtaccgggaaacttgctcccgccgtggcaccgccgcctacccgcttttaggctcgggtata +tatcaggtccctgttagtctcagctttgacgcctgggaacgcaaccaccgccccggtgatgagctttacctg +actgagcccgccgcagcc-------------------------------------------------tggtt +cgaggctaataagccgtcgca--------------------------------------------------- +------------------------------------------gccagcgcttactataactgaggacacggc +cc------------gcacggccaacctcgcattagagatcg------------atgctgccacagaggtcgg +ccgtgcttgt---gctgggtgtactatcagtcccggggttgtgtactatcaattcactgctggggtcccggg +ctcgggcaagtcaaggtccatacgacagggtgacgtcgatgtggtggttgtgcctacccgggagctccgtaa +tagttggcgtcgccggggttttgcggcttttacacctcacacggcggcccgtgttaccatcggccgccgtgt +cgtgattgatgaggctccatccctcccacctcacctgctgctgttacatatgcagcgggcctcctcggtcca +tctccttggtgacccaaaccagatccctgctattgattttgaacacgccggcctggtccccgcaatccgccc +cgaacttgcaccaacgagctggtggcacgttacacaccgctgcccggccgatgtgtgtgagctcatacgtgg +ggcctaccctaaaatccagaccacgagtcgtgtgctacggtccctgttttggaacgaa------ccggccac +cggccagaaattggttttcacgcaggctgctaaggctgctaaccctggtgcgattacggttcatgaagccca +aggtgccacctttacagagactacaattatagccacggctgacgccaggggccttatccagtcatcccgggc +tcacgctatagttgcactcactcgccacactgagaagtgcgttattctggacgcccccggcctgctgcgtga +ggttggcatttcagatgtgattgtcaataacttc------------------------------ttccttgc +tggcg--gagaggttggtcatcaccgcccttctgtaataccccgcggtaaccctgaccagaacctcgagac- +-----tttacaagccttcccgccgtcctgccagattagtgcttaccatcagctggctgaggaactaggccac +cgtccggcccccgttgccgccgtcctgcccccttgtcccgagcttgagcagggcctgctctatatgccacag +gagctcactgtgtccgatagtgtgttggtttttgagctcacggatatagtccattgccgtatggctgcccca +agccagcgaaaggctattctctcgacactcgtggggaggtatggccgtaggactaaattatacgaggcagcg +cactcagacgtccgtgagtccttagccaggttcatccccactattggacctgtccaggccactacatgtgag +ttgtatgagctggttgaggccatggtggagaagggtcaggacggctctgctgtcctagagcttgacctttgc +aaccgtgatgtctcgcgcatcacattcttccaaaaggactgcaacaagtttacaaccggtgagactatcgcc +catggcaaggttggccagggtatatcggcctggagtaagaccttttgcgctctgttcggcccgtggttccgc +gctatcgaaaaacaaatactggccctactcccgcctaatatattctatggcgacgcctatgaggagtcagtg +tttgccgccgctgtgtccggggcggggtcatgtatg---gtatttgagaatgacttctctgagtttgatagt +acccaaaataatttctctct------------------cggccttgaatgtgtcgtaatggaggagtgcggc +atgcctcaatggttaattagattgtatcatctggttcggtcagcctggattttgcaggcgccgaaggagtct +cttaagggtttctggaagaagcattccggtgagcctggtacccttctctggaacactgtctggaatatggcg +attatagcacattgctatgaattccgtgactttcgtgttgccgctttcaagggtgatgattcggtggtcctc +tgtagtgactaccggcaaagtcgcaatgcggccgccttaattgcaggctgcgggctcaaattaaaggttgat +taccgccctattgggctgtatgctggggtggtggtggcccccggtttggggacactgcccgatgtggtgcgt +ttcgctggtcggttatctgagaagaattggggccccggcccggaacgagctgagcaactgcgtcttgccgtt +tgtgatttccttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggagtcagccccgggctggtacataaccttattggtatgctgcagaccattgctgatggcaaggcccattt +tacagagactattaaacctgttcttgaccttacaaattctatcatacagcgggtggaatgaataacatgtc- +t----------------tctgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gctgttgttcctcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgcgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgcggatgtcgtttcacaacccggggctggagctcgcccta +gacagccgccccg---------------cccccttggctccgcttggcgtgaccagtccca----------- +------gcgcccctccgctaccccccgccgtcgatctgcccca---------gctggggctgcgccgctgac +tgctatatcaccggcccccgacacagcccctgtacctgatgttgattcacgtggagctatcctgcgccggca +gtataatttgtccacgtccccccttacgtcatctgttgcttcgggtactaatctggttctctatgccgcccc +gctgaatcctcttctgcctcttcaggatggcaccaacactcacatcatggccaccgaggcatccaattatgc +ccagtatcgggttgttcgagctacgatccgttaccgcccgctggtgccaaatgctgttggtggttatgctat +ctctatttctttttggcctcagactacaactacccctacttctgttgacatgaattctattacttctactga +tgttaggattttggttcagcccggtatcgcttccgagttagtcatccccagtgagcgccttcactatcgcaa +ccagggctggcgctccgttgagaccactggtgtggctgaggaggaggctacttctggtttggtaatgctttg +tatacatggctctccagtcaattcctatactaataccccttacactggtgcacttggactccttgactttgc +attagagcttgaatttagaaatctgacacccgggaacactaacacccgtgtctcccggtacaccagcacagc +tcgccaccggctgcgccgtggtgctgacgggaccgctgaacttaccaccacagcagccacgcgcttcatgaa +ggatctgcacttta---ctggcatgaat---ggcgttggtgaggtcggccgtggtattgccctgacattgtt +taatcttgccgatacgctcctcggtggtttgccgacagaattgatttcgtctgccgggggtcaactgtttta +ctcccgccctgttgtctcggccaatggcgagccaacagtaaagctatatacatctgttgagaatgcgcagca +agataagggcattgccatcccacacgatatagatttgggtgattcccgtgtggttattcaggactatgataa +ccagcacgagcaagatcgtcctactccgtcacctgccccctcccgcccgttctcagtccttcgtgccaatga +tgtcctgtggctctc-----------------------------tctcactgccgccgagtacgac------ +cagactacctatgggtcgtccaccaaccctatgtatgtctctgacactgtcacgcttgt---caatgttgct +actggtgctcaggctgttgcccgctctcttgattggtccaaagttaccctggatggtcgcccccttactacc +at-----tcagcagtactctaagacattttatgtcc-tcccgctccgcgggaagctttccttttgggaggct +ggtacgactaag--gccggttacccgtataattataataccacggctagtgaccaaattttgattgagaacg +cggccggccac------cgtgttgctat-ttccacctataccactagcttggg--------------tgccg +gccctacttcgatctc-tgcggtcggtgtactagctccacactcggctcttgctattcttgaagatactgtt +gact---------accccgctcgcg----cccatacttttgatgatttctgcccggagtgccgtaccc---t +cggtttacagggctgtgcattccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattaa-tt----c--c--t-cct------gt +gccc-cct--------tc-gtag-cttcgtttggt-tt--------------------tatt-t-------c +ttatttct---------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH504131.1/17231/1-7231 |Hepeviridae isolate HEV_33_Newcastle_UK_NA, complete genome +----------------------------------ca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagttggtttttcggcctgaagtgctctggaatcatccgatccaacgggt +tattcataatgaacttgaacagta---ctgtcgggccc-gggctggtcgttgtctagaggttggggcccacc +caagatctattaatgacaacccaaatgttctgcatcggtgttttctacgaccagttgggagagatgttcagc +gctggtactctgctcctacccgcggccctgcggctaactgccgccgttctgctttgcgtggcctcccccctg +ttgatcgtacctattgttttgatggattttcccgctgctcatttgccgcagaaactggggttgccctctatt +ctctgcatgacctctggccggccgatgttgcggaggctatggcccgacacgggatgacacgcctgtatgctg +cactacatctc-cctcctgaagtactactaccacccggtacttaccacacaacttcataccttcttattcac +gacggtgatcgtgctgttgtgacctatgaaggtgatactagtgcaggttacaaccatgatgtttccatactt +cgtgcatggatccgcacaactaagatagtcggcgaccatccgctggtgatagagcgtgtgcgggctattggc +tgccattttgtgctgctgcttactgcagcccctgagccgtcaccaatgccttatgtcccatacccccggtcg +acagaggtgtatgtccgctctatattcggccctggc---------gggtccccatccctattcccatcagct +t----------gctctacgaaatcta-catttcatgctgtcccggttcacatttgggaccggcttatgcttt +ttggcgctactttggatgatcaggcgttttgctgttcacggcttatgacctacctccgcgggattagttaca +aggttactgttggcgcccttgtcgctaatgaggggtggaacgcttcggaggacgctctcaccgctgttatta +ctgcagcgtatttgaccatctgccatcagcgttacctccgtactcaggctatatccaagggcatgcgccgac +tggaggttgagcatgcccaaaaattcattacaagactttatagttggctgttcgagaagtc---------cg +gccgtgactatatccccggccgccagctccagttctatgcacagtgccgccgttggttatcggcgggtttcc +atcttgacccaagggtgcttgtctttgatgaatccgtgccctgc---cgttgtaggacattccttaagaa-- +----ggcagtgggcaagttctgctgcttcatgaagtggttgggacagga------gtgcacctgttttttgg +----------------aaccagcagagggtctagttggcgaccatggc--------cacgataatgaagcct +atgagggctctgaggtcgatcaggccgagcccgcccacctcgatgtttctgggacttacgccgtccatggcc +gccagcttgaggccctgtatagggcgcttaacatcccgcatgacatcgctgcccgagcctcccgtttgactg +ccaccgtcgaactcgttgcaggcccagaccgcctggagtgttgcactgtgctcgggaataagaccttccgca +cgacggtggttgatggcgcccatcttgaggcgaacggccc------------------------cgagcagt +acgttctttcgtttgacgcctctcgccagtccatgggggccggaccgcatagtctctcttacgagctcactc +cagccggtttgcagatcaagatttcatct-------aatggcctggattgcactgcaacattcccc---ccg +ggcggggcccctagtgctcctccgggggaggtagcagccttttgcagtgccctttacaggtacaacaggttc +actcagcgccattcgcttataggtggcttgtggctgcatcctgaggggttattgggtatcttcccccctttt +tctcccgggcacctctgggaatccgctaaccctttttgtggggagggaaccttgtacaccaggacatggtca +acatctggtttttctagtgacttttccccccctgaggcagccgtcgcagcgccggctgtcactcc----ggg +gtcacgcc---accctacacctcctgttagtgacat-----------------ttgggtgct---------- +---------accgccacct----tccgaagaat--------------ttcgtgttgacacagcgcccgctcc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccccgagcccgctcaaccatctagc +cccgctgggccaaag-------------------------------------gctcccgtgcgtaagccgcc +aacgccacc--------------------------------------atccccgcgtacccgccgcc----- +-------------------ttctttacacctatccggatggggcaaaggtgtatgcggggtcactatttgag +tctgactgtgactggctggttaatgcgtcgaatcccggccatcgtcctggcggcggcctttgtcatgccttc +taccaacgctaccccgagtctt------tctacccaactgagttcattatgcgcgacgg---tcttgccgcg +tatactttgactccccggcctattattcatgcagtggcccctgattatagggttgagcataacccgaagagg +cttgaggcagcataccgagagacttgctctcgccgcggtactgccgcctacccactcctcggctcgggcata +taccaagtccccgtcagcctcagctttgacgcctgggagcgtaaccatcgccccggggatgagctctaccta +accgacctcgccgctacc-------------------------------------------------tggtt +tgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------gccggccctcacaataactgaggacgcagc +cc------------gtacagccaacctagcactggagatcg------------atgctgctacggaggttgg +ccgggcttgt---gccggctgtgcagttagtcctggggttgtgtactatcagtttactgctggggtcccagg +ctcggggaagtcgcgttctatacagcagggggatgttgacgtagtggtcgttcctactcgggaacttcggaa +tagttggcgtcgccggggttttgcagcttttacacctcatacggcggcccgtgtcaccacgggccgtcgtgt +tgtgattgatgaggccccatccctcccaccgcatttattgctactacacatgcagcgggcctcgtcggtcca +ccttctcggcgacccaaaccagatccctgctatagacttcgagcacgctggtctggtccccgcaatacgccc +tgagcttgcgcccaccagttggtggcatgtcactcaccgctgccccgctgatgtgtgcgagcttatacgcgg +ggcttatcctaaaatccaaaccactagccgcgtgctgcggtctctattctggaatgag------cctgccat +cggccagaagttagtttttacccaggctgctaaggccgccaaccccggtgcgatcacggtccacgaggccca +gggcgccactttcacggaaactacaatcatagccacagctgatgctagggggctcatccaatcttctcgagc +tcatgccatagttgcacttacccgccacacagagaagtgcgttattcttgacgcccccggcttgttacgtga +ggttggtatatcggatgtgattgtcaacaatttt------------------------------ttccttgc +cggcg--gggaggtgggtcaccatcgcccctctgtgatacctcgcggtaatcccgaccagaatctcgcgac- +-----attacaggcttttccaccttcttgccagatcagtgcctatcaccagttagctgaggaacttggtcac +cgcccagctcccgtcgctgctgtcttgcctccttgccctgaacttgagcaaggcttattatatatgccgcag +gagcttacggtctctgatagcgtgttggtctttgaactcacagatatagtccactgccggatggccgcccct +agccagcggaaggctgtcctatcgacgctcgtgggtaggtacggccgtcggacgaagctgtatgaagcagct +cactctgacgtccgtgagtccctggctagattcatccccaccattgggcccgttcaggctactacgtgtgag +ttatatgagctggttgaggccatggtggagaaaggtcaggatggctctgccgtgcttgagctcgacctctgc +aatcgtgatgtatcccgtatcacatttttccagaaagattgtaataaattcaccacaggggagactattgcc +cacggtaaggtcggccagggcatttcggcttggagtaagaccttctgtgccctgtttggtccgtggtttcgt +gctattgaaaaagaaatactagctctgctcccgcctaatatcttctacggcgatgcatacgaggagtctgtg +tttgccgccgctgtgtcaggggcaggttcaagcatg---gtatttgagaatgatttctcagagtttgatagc +actcagaataacttctccct------------------tggcctcgagtgtgtagttatggaggaatgtggc +atgccccagtggctaatccggttgtaccatttggttcgatcggcctggattctgcaggcgccgaaggagtct +cttaagggattttggaagaaacattctggtgagcccggcaccctcctctggaacactgtctggaatatggcg +atcatagcacactgctatgaattccgtgattttagggttgccgctttcaagggagatgactccgtggtcctc +tgcagcgactaccgccagagccgcaatgcagcggccttgattgcaggttgtgggctcaaactgaaggttgat +tatcgccctattgggttgtatgctggtgtggtggtggcccctggtctggggacgctacccgatgtggtgcgc +tttgccggccggctgtctgagaagaactggggtcctgggccggagcgggctgagcagttgcgcctagctgtt +tgtgacttccttcgagggttaacgaatgttgcgcaggtgtgtgtcgatgttgtatcccgag-------ttta +tggagttagccctgggttggtacataaccttattggcatgttgcaaaccatagctgatggcaaagcccactt +tacagagactgttaaacctgtgcttgacctcacgaactctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgcgccctagggctgtttt +gttgctgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtaccgcaatccggggctggagctcgccctc +gacagccaccccg---------------tcccctcggctcctcttggcgtgatcagtccca----------- +------gcgcccctccgctgtcccacgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgccatatcacctgctcccgatacagcccctgtgcctgatgttgactctcgcggcgccatactgcggcgcca +gtacaatttatccacatccccgctcacatcatctgttgcttcgggtactaatctggttctctacgctgcccc +gctaaaccctttgctgccccttcaggatggcactaacactcacatcatggccactgaggcatctaattatgc +ccagtatcgggttgttcgagctacgatccgctacaggccattggtgccaaatgctgttggcggttatgcaat +atccatatcattttggcctcaaactactaccacccctacgtctgttgatatgaactctatcacttccactga +tgttaggattctagttcagcccggcattgcttctgagttggttatccctagtgagcgtctccattatcgtaa +ccagggctggcgctctgtggagacctcgggtgtggctgaagaggaggctacttctggtttggtaatgctttg +tatccatggttctcccgttaattcctacaccaataccccctataccggggcgcttggactccttgattttgc +tttagagcttgagtttaggaatctgacacctgggaacaccaacacccgtgtgtcccggtatacaagcacagc +ccgtcatcggctgcgccgcggtgctgatggcaccgcggaacttaccaccacggcggccacgcgcttcatgaa +ggacttgcacttca---ccggtactaat---ggggtcggtgaggtgggtcgcggtattgccctcacactctt +taatcttgctgacacgcttctcggtggtttgccgacagaattaatttcgtcggctgggggacagttattcta +ctcccgccccgtcgtctcagccaatggcgagccgaccgtcaagttatacacatccgtagagaatgcgcagca +ggataaagggatcgctatcccacatgacatagatctgggtgactcccgtgtggtcatccaagactatgataa +ccagcatgagcaggaccgacccaccccctcgcctgccccttctcgccctttttcggttcttcgcgctaatga +tgttctatggctttc-----------------------------tctcactgccgccgagtatgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctcggatactgtcacatttgt---caacgtggct +acgggagcccaggctgtcgcccgttcccttgattggtctaaagttactctggacggccgccctcttactact +at-----ccagcagtattccaaaacattttatgttc-tcccgcttcgcgggaagttatctttctgggaggcc +gggacgactaag--gccggctatccctataattacaacacaactgctagtgatcagattttgattgaaaatg +cagctggtcac------cgtgttgctat-ttccacgtataccaccagcttggg--------------cgctg +gccctgtgtctgtttc-tgcagttggtgttttagccccacattcggcccttgcagtccttgaagacactatt +gatt---------accctgcccgtg----cccacactttcgatgatttttgtccggagtgtcgcgctc---t +tggtttgcaggggtgtgccttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattaa-tt----t--cctt---t------gt +gccc-cct--------tc-atag-cttt-----ac-tt---t----------------attc-t-------c +ctttttct----gc----------------ggttcgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaa----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH504132.1/17215/1-7215 |Hepeviridae isolate HEV_32_Manchester_301214, complete genome +-------------------------------------cgtatg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtagttaggccgtttttatctcgtgtgcaaaccgagattct +tattaatttaatgcaaccccggcagcttgttttccgccccgaggttttctggaaccatcccatccagcgcgt +catccacaatgaacttgaacagta---ctgtcgggccc-gggctggtcgttgtctagaggttggggcccacc +caagatccattaatgacaacccaaatgttcttcaccggtgctttctacgaccagtagggagagatgttcagc +gttggtactctgcccctacccgcggccctgcggctaactgccgccgctctgccttgcgtggcctcccccccg +ttgatcgtacctactgttttgatggattctcccgctgctcatttgccgcagaaactggggttgccctttatt +ccctgcatgacctctggccggccgatgttgcggaggctatggcccgacacgggatgacacgcttgtatgctg +cactacatctc-ccccctgaagtactactaccacccggtacttaccatacaacttcataccttctgattcac +gatggtgatcgtgctgttgtgacctatgaaggtgatactagtgcaggctacaaccatgatgtttccatactt +cgtgcatggatccgcacaactaagatagtcggcgaccatccgctggtgatagagcgtgtgcgggctattggc +tgccattttgtgctgctgcttactgcagcccctgagccgtcaccaatgccttatgtcccatacccccggtcg +acagaggtgtatgtccgctctattttcggcccgggt---------ggtaccccttccctattcccatcagct +t----------gctctacgaaatcta-catttcacgctgtcccggttcatatttgggaccggctcatgcttt +ttggtgctactctggatgatcaggcgttttgctgttcacggcttatgacctacctccgcgggattagttaca +aggttactgttggcgcccttgtcgctaatgaggggtggaatgcttcggaggacgctcttaccgctgttatta +ctgcagcgtatttgaccatctgccatcagcgttacctccgtactcaagctatatccaagggtatgcgccgat +tggaggttgagcatgctcaaaaattcattacaagactttatagctggctgttcgagaagtc---------cg +gccgtgactatatccccggccgccagctccagttctacgcccagtgtagccgttggctatcggccggcttcc +accttgacccacgggtcctggtttttgatgagtctgtgccctgc---cgttgtaggacatttctcaagaa-- +----ggctgtaggcaagttctgctgttttatgaagtggctgggacagga------gtgcacctgctttttgg +----------------aaccagcagagggtctagttggcgaccatggc--------cacgataatgaagctt +atgagggctccgaggtcgatcaggccgagcccgcccatctcgatatttctgggacttatgccgtccatggcc +gtcaacttgaggctctgtacagggcgcttaacatcccgcatgacatcgctgcccgagcctcccgtttaactg +ccaccgtcgaacttgttgcaggtccagaccgcttggagtgccgcactgtgcttgggaataagactttccgga +cgacggtggttgatggcgcccatcttgaggcgaacggccc------------------------cgagcagt +atgttctttcgttcgacgcctctcgccagtctatgggggccgggccgcatagtctctcctacgagctcactc +ccgctggtttgcaggtcaagatctcatct-------aatggcctggattgcactgcaatattcccc---ccg +ggcggggcccctagcgctgctccgggcgaggtagcagcattttgcagtgcccttcacaggtataacaggttt +actcagcgccattcgcttataggtggcttgtggctgcaccctgaggggttgctgggcatcttcccccctttt +tctcccgggcacctttgggagtctgctaaccctttttgtggggagggaaccttgtacacccggacatggtcg +acatctggtttttctagtgacttttccccccctgaggcagccgtcgcggcgccggctgctactcc----ggg +gttgcgcc---accccacacctcctgttagtgatat-----------------ttgggtgtt---------- +---------accgccaccc----tccgaagaat--------------ttcaggttgatacagcgcccgctcc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcccgctcaaccatctagc +cccgctgggccaaag-------------------------------------gctcccgtgcgtaagccgcc +agcgccacc--------------------------------------atcctcgcgcacccgccgcc----- +-------------------ttctttacacctatccggatggggcaaaggtgtatgcggggtcactgtttgag +tctgattgtgactggctggttaatgcgtcgaatcccggccatcgtcctggcggcggcctttgccatgccttc +tatcaacgctatcccgagtctt------tccacccaactgagttcattatgcgcgacgg---tcttgccgcg +tacactttaactccccggcccattatccatgcagtggcccctgattatagagttgagcataacccaaagagg +ctcgaggctgcataccgagagacttgctctcgccgcggcaccgccgcctacccactcctcggctcgggcata +taccaagtccccgtcagcctcagctttgacgcttgggagcgtaaccaccgccccggggacgagctctaccta +accgacctcgccgccacc-------------------------------------------------tggtt +tgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------gccggcccttacaataactgaggatgcagc +cc------------gcacagccaacctagcgctggagattg------------atgctgctacggaggtcgg +ccgggcctgt---gccggctgtgcagttagtcctggggttgtgcactatcagtttactgccggggtcccagg +ttcggggaagtcgcgctctatacagcagggggatgttgacgtagtggttgttcccactcgggagctccggaa +tagttggcgtcgccggggttttgcagcttttacacctcatacggcggcccgtgttaccacgggccgtcgtgt +tgtgattgatgaggccccatcccttccgccgcacttgttgctattacacatgcagcgggcctcgtcggtcca +cctcctcggcgacccaaaccagatccctgctatagacttcgagcacgccggcctggtccccgcaatacgccc +tgagcttgcacccaccagttggtggcatgtcacccaccgctgccccgctgacgtgtgcgagcttatacgcgg +ggcttaccccaaaatccaaaccactagccgcgtgctgcggtctttattttggaatgag------cctgccat +cggccagaagttagtttttactcaggctgctaaggccgccaaccctggtgcgatcacagtccacgaggccca +gggcgccactttcacggaaactacaatcatagccacggcagatgcccgaggccttattcagtcgtctcgggc +tcatgccattgttgctctaacgcgccacacagagaagtgcgttattcttgatgcccccggcttgttacgtga +ggttggtatatcggatgtgattgtcaacaacttc------------------------------ttccttgc +cggtg--gagaggtgggtcaccatcgcccctcagtgataccccgcggtaatcctgaccagaacctcgcgac- +-----actacaggcctttccaccttcttgccagattagtgcctatcaccagttagctgaggagcttggccac +cgcccagctcccgtcgccgctgtcctgcccccttgccctgaacttgagcaaggcttattatatatgccgcag +gagcttacggtgtctgatagcgtgctggtctttgaactcacggatatagtccattgccggatggctgccccc +agccagcggaaagccgtcctatcgacgctcgtgggtaggtacggccgtcggacgaagctgtatgaagcagcc +cactctgacgtccgtgagtctctggctagatttatcccggccattggtcccgtgcaggtcacaacttgtgaa +ttgtacgagttagtggaggccatggtcgagaagggccaggatggctccgccgtccttgagctcgacctttgc +aaccgtgatgtgtccaggatcaccttctttcagaaagactgtaacaagttcactacgggtgagaccattgcc +catggtaaggtgggccagggcatctcggcctggagcaagaccttctgcgccctctttggcccctggttccgt +gctattgagaaggctatcctcgccctgctcccgcctaatatcttctacggtgacgcatacgaggagtctgtg +tttgccgccgctgtgtcaggggcaggctcaagcatg---gtatttgagaatgatttttcagagtttgatagc +acccagaataacttctccct------------------tggcctcgagtgtgtagttatggaggaatgtggc +atgccccagtggctaatccggttgtaccatttggttcggtcggcctggattctacaggcaccgaaggagtct +cttaagggattttggaagaagcactctggtgagcccggtaccctcctttggaacactgtttggaatatggcg +atcatagcacactgctatgagtttcgtgatcttagggttgccgctttcaagggagatgactccgtggtcctc +tgtagcgactaccgtcagagccgcaatgcagcggccctgattgcaggttgcgggctcaaactgaaggttgat +tatcgccctatcgggttgtatgctggtgttgtggtggcccctggtctggggactctacccgacgtggtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggcggagcagctgcgcctagctgtt +tgtgatttccttcgagggttaacgaatgttgcgcaggtatgtgtcgatgttgtatcccgag-------ttta +tggagttagccctgggttggtacataaccttattggcatgctgcaaaccatagctgatggcaaggcccattt +tacagagactgttaaacctgtgcttgacctcacgaactctatcatacagcgggtggaatgaataacatgtc- +t----------------tttgctgcgcccatggg------------ttcaccatgcgccctcggcctatttt +gctgttgctcctcatgtttttgcctatgctgcccgcgc---------------------------------- +-caccgc------ccggtcagccgtctggcc------------gccgtcgcgggcg-gcgcagcggcggttc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----caatcccctatattcat---- +--------------ccaaccaaccccttcgcccccgatgtcgtaccgccggccggggctggacctcgtgttc +gccaacccgcccg---------------accactcggttccgcttggcgtgaccaggccca----------- +------gcgccccgccgctgccccacgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgccatatcacctgcccccgatacagcccctgtgcctgatgtcgactctcgcggcgccatattgcggcgcca +gtacaatttatccacatccccgctcacatcatctgttgcttcgggtactaatttggttctttatgctgcccc +gctaaaccctttgctgccccttcaggatggcaccaatactcacataatggccacggaggcctccaattatgc +tcagtaccgggttgcccgtgccacaatccgttaccgcccgctggtccccaacgctgtcggcggttacgccat +ctccatttcattctggccacagaccaccaccaccccgacgtccgttgatatgaattctattacttccactga +tgttagaattctagttcagcccggcattgcttctgagttggttatccctagtgagcgcctccattatcgtaa +ccagggctggcgctctgtggagacctcgggtgtggctgaagaggaggctacttctggtttggtaatgctttg +tatccatggctcacctgtaaattcctacactaatacaccctataccggtgccctcgggctgctggactttgc +tcttgagcttgagtttcgcaaccttacccccggtaacactaacacgcgggtctcccgttattccagcactgc +tcgccaccgccttcgtcgcggtgcggacgggactgccgagctcaccaccacggctgccacccgctttatgaa +ggatctctatttta---ctagtactaat---ggtgtcggtgagatcggccgtgggatagctcttaccctgtt +taatcttgctgatactctgcttggcggcctgccgacagaattgatttcgtcggctggtggccagctgtttta +ctcccgccccgtcgtctcagccaatggcgagccgactgtcaagctatatacatctgtagagaatgcgcagca +ggataaagggatcgctattccacatgatatagatctgggtgactcccgtgttgtcatccaagactatgacaa +ccagcatgagcaggatcgacccaccccctcgcctgccccttctcgccctttttcggttcttcgtgctaatga +tgttttatggctttc-----------------------------tcttactgccgccgagtatgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctcggatactgtcacatttgt---caacgtggct +acaggagcccaggctgtcgcccgttcccttgactggtctaaagttactctggacggccgccctcttactact +at-----ccagcagtactctaaaacattttatgttc-tcccgcttcgcgggaagttatccttctgggaggca +ggcacaactaag--gccgggtacccttataattataacaccactgccagtgaccagttgctcattgagaatg +ctgctggtcat------cgtgttgctat-ttccacgtataccaccagcttggg--------------cgctg +gccctgtgtctgtttc-tgcagttggtgttttagccccacattcggcccttgcagtccttgaagacactatt +gact---------accctgcccgtg----cccacactttcgatgatttttgcccggagtgtcgcgctc---t +tggtttgcaggggtgtgccttccagtc--------cactattgctgagcttcagcgtct------------- +--------caagatgaaggtgggtaaaactcgggagttttaatcaa-tt----t--tctc---t------gt +gccc-cct--------tc-atag-cttt-----gc-tt---t----------------attt-c-------t +ttttttct----gc----------------ggttcgcgctccctg---------------------ga---- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH504133.1/17229/1-7229 |Hepeviridae isolate HEV_31_Oxford_UK_051214, complete genome +-------------------------------------cgtatg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtacaaactgagattct +tattaatttgatgcaacctcggcagttggtttttcgacctgaagtgctctggaaccatcctatccaacgggt +tatccataatgaacttgaacagta---ctgccgggccc-gggctggtcgttgtctagaggttggggcccacc +caagatccattaatgacaacccaaatgttctgcaccggtgctttctacgaccagttgggagagatgttcagc +gctggtactctgctcccacccgcggccctgcggctaactgccgccgttctgctttgcgtggcctcccccccg +ttgatcgtacctactgctttgatggattctctcgttgctcatttgctgcagaaactggggttgccctttact +ctctacatgacctctggccggccgatgttgcggaggctatggctcggcacgggatgacacgcctgtatgctg +cattacatctc-cctcctgaagtactactgccacccggtacttaccacacaacttcataccttctgattcac +gacggtgaccgtgctgttgtaacctatgaaggtgatactagtgcaggctacaaccatgatgtctccatactt +cgtgcatggatccgcacaactaagatagtcggtgatcatccgctggtgatagagcgtgtgcgggctattggt +tgccactttgtgctgctgcttactgcagcccctgagccgtcaccaatgccttatgttccatacccccggtcg +acagaggtgtatgtccgctctatattcggccctggc---------gggtccccatccctattcccatctgct +t----------gctctacgaaatcca-catttcatgctgtcccggttcatatttgggaccggctcatgcttt +ttggcgctactctggatgatcaggcgttttgctgttcacggcttatgacctacctccgcgggattagctaca +aggttactgttggcgcccttgtcgccaacgaggggtggaatgcttcggaggacgctcttaccgctgtcatca +ctgcagcgtatttgaccatttgtcaccagcgctaccttcgcactcaagctatatccaagggtatgcgccgac +tggaggttgagcatgcccaaaaattcattacaagactttatagttggttgttcgaaaagtc---------cg +gccgtgattacatccccggccgccagctccagttctatgcacagtgccgccgctggttatcggcgggtttcc +atctcgacccaagggtgcttgtttttgatgagtctgtgccctgc---cgctgtaggacatttcttaagaa-- +----ggctgtgggtaagttctgctgttttatgaagtggttaggacagga------gtgcacctgctttttgg +----------------aaccagcagagggtctagttggcgaccatggc--------cacgataatgaggcct +atgagggctctgaggtcgatcaggccgagcctgcccgtctcgatgtttctgggacttatgccgtccatggcc +gccaacttgaggccctgtatagggcgcttaacatcccgcacgacatcgctgcccgagcctcccgtttgacag +ccaccgtcgaactcgttgcaagtccagaccgcttggagtgccgcactgtgcttgggaacaagactttccgga +cgacggtggttgatggcgcccatcttgaggcgaatggccc------------------------cgagcagt +acgtcctttcgtttgacgcctctcgccagtctatgggggccgggccacatagtctctcctacgagctcactc +ctgctggtttgcaggtcaagatttcatct-------aatggcctggattgcactgcaacattccct---ccg +ggtggggcccctagcgctgctccgggggaggtggcagccttctgcagtgccctctacaggtacaacaggttc +actcagcgccattcgcttataggcggcttgtggctgcatcctgaggggttgttgggtatcttcccccctttc +tctcccgggcacctttgggagtccgctaaccctttttgtggggagggaactttgtatacccggacatggtcg +acatctggtttttctagtgacttttccccccctgaggcagccgtcgtagcgccggctgctactcc----ggg +gttacgcc---atcctacacctcccgctagtgatat-----------------ctgggtgtt---------- +---------accgccgcct----tctgaagaat--------------ttcaggttgacacagcgcccgctcc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cctctgagcccgcccaaccatctagc +cccgctgggccaaag-------------------------------------gctcccgtgcgtaagccgcc +aacgccacc--------------------------------------gtccccgcgcacccgccgcc----- +-------------------ttctttacacctatccggacggggcaaaggtgtatgcggggtcactgtttgag +tctgactgtgattggctggttaatgcatcgaatcccggccatcgccctggaggtggcctttgccatgccttc +taccaacgctaccccgagtctt------tccatccaactgagttcattatgcgcgacgg---tcttgccgcg +tatactttaactccccggcctattatccatgcagtggctcctgattatagggtagagcataacccaaagagg +cttgaggcagcataccgagagacttgctcccgccgcggtactgccgcctacccactcctcggctcgggtata +taccaagttcccgtcagcctcagctttgacgcttgggagcgtaaccaccgccccggggacgagctctaccta +accgacctcgcagctgcc-------------------------------------------------tggtt +tgaggctaacaagccagcaca--------------------------------------------------- +------------------------------------------gccggccctcacaataactgaggatgcagc +cc------------gtacagccaacctagcactggagatcg------------atgctgccacggaggtcgg +ccgggcttgc---gccggctgtgcagttagtcctggggttgtgcactatcagtttactgctggggtcccagg +ttcagggaagtcgcgttctatacagcagggggatgttgacgtagtggttgttcctacccgagagctccggaa +tagttggcgtcgccggggttttgcagctttcacacctcatacggcggcccgtgtcactacgggccgtcgtgt +tgtgattgatgaggccccatccctcccgccgcacttgctgctactacacatgcagcgggcctcgtcagtcca +ccttcttggcgacccgaatcagatccctgccatagacttcgagcatgccggcctggtccccgcaatacgtcc +tgagcttgcgcccaccagttggtggcatgtcacccatcgctgccccgctgacgtgtgtgagcttatacgcgg +ggcttatcccaaaatccaaaccactagccgcgtgctgcggtctctattctggaatgag------cctgctat +tggccagaagttagttttcactcaggctgctaaggccgccaaccccggtgcgattacagtccacgaggccca +gggcgccactttcacggaaactacaattatagccacggccgatgctagggggctcatccaatcctcccgagc +tcatgccatagtcgcacttacccgccacacagagaagtgcgtcatccttgacgcccccggcctattacgtga +ggttggtatatcggatgtgattgtcaacaatttt------------------------------ttcctctc +cggcg--gggaggtgggtcaccatcgcccctctgtgatacctcgtggtaatcctgaccagaacctcgcgac- +-----actacaggcctttccaccttcctgccagattagtgcctatcaccagttagctgaggaacttggccac +cgcccagcccccgtcgccgctgtcttgcccccttgccctgaacttgagcaaggcttgttatatatgccgcag +gagcttacggtgtctgatagcgtgctggtctttgaactcacggacatagtccactgccggatggccgctcct +agccagcggaaggccgtcctatcgacactcgtgggtaggtacggccgtcggacgaagctgtatgaagcagct +cactctgatgtccgtgagtccctggctaggttcatccccaccattgggcccattcaggctactacgtgtgag +ttatatgagctggttgaggccatggtggagaaaggtcaggatggctctgccgtgcttgagctcgacctctgc +aatcgtgatgtatcgcgtatcacattcttccagaaagactgtaataaattcaccacaggggagaccattgcc +cacggcaaggttggccagggcatctcggcctggagtaagaccttttgtgccctgtttggtccgtggtttcgt +gctattgaaaaagaaatattggacctgctcccgcctaatattttctatggcgatgcatacgaggagtctgtg +tttgccgccgctgtgtcaggggcaggttcaagcatg---gtatttgagaatgatttttcagagtttgatagc +acccaaaataacttctccct------------------tggtcttgaatgtgtgatcatggaggaatgtggc +atgccccagtggctaattcggttgtaccatttggttcggtcagcctggatcctacaggcgccgaaggagtct +ctcaaggggttttggaaaaagcattctggtgagcctggcaccctcctctggaatactgtctggaatatggcg +atcatagcacactgctatgaattccgtgattttagggttgccgctttcaagggtgatgattccgtggtcctc +tgtagcgactaccgtcagagccgcaatgcagcggccctgattgcaggctgcggactcaaattgaaggttgat +tatcgccctattgggttatatgctggtgtggtggtggcccctggtttggggacgctacccgatgttgtgcgc +tttgccggccggctgtctgagaaaaactggggccctgggccggagcgggctgagcaattgcgcctagctgtt +tgtgacttccttcgagggttaacgaatgttgcgcaggtatgtgtcgatgttgtatcccgtg-------ttta +tggagttagccctgggttggtacataaccttattggcatgctgcaaaccatagctgatggcaaagcccattt +tacagagactgttaaacctgtgcttgacctcacgaactctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagtcgtctggcc------------gccgtcgttggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtaccacaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgcgatcagtccca----------- +------gcgcccctccgccgccccacgtcgtcgatctgcccca---------gctggggctgcgccgctgac +cgctatatcacctgctcccgatacagctcctgtacctgatgttgactcgcgcggcgccatattgcgacgcca +gtacaatttatccacatccccgctcacatcatctgttgcttcgggtactaatctagttctttatgctgcccc +gctaaaccctttgctgccccttcaggatggcactaatactcacatcatggccactgaggcatctaattatgc +ccagtatcgggttgttcgagccacgatccgctataggccactggtaccaaatgctgtcggcggttatgcaat +atccatctcattctggcctcagactaccactactcccacgtctgttgatatgaactctattacttccactga +tgttaggattttagttcaacctggcattgcttctgagttagttatccctagtgagcgcctccattatcgtaa +ccagggctggcgctcagtggagacctcgggtgtggctgaggaggaggctacttccggtttagtaatgctttg +tatccatggctctcctgtcaattcctacactaataccccctataccggggcgcttgggctccttgatttcgc +tttggagcttgagtttaggaacttgacacccgggaataccaacacccgtgtgtcccggtatacaagcacagc +ccgtcatcggttgcgccgcggtgctgatggcaccgctgaacttactaccacggcagccacgcgcttcatgaa +ggacctgcacttca---ccggcacgaat---ggggtcggtgaggtgggtcgtggtattgctctcacactctt +taatcttgctgacacgcttctcggtggtctgccgacagaattgatttcgtcggctgggggacagttattcta +ctcccgtcccgtcgtctcagccaatggcgagccgaccgtcaagttgtacacatctgtagagaatgcgcagca +ggataaagggattgctatcccacacgacatagatctgggtgactcccgtgtggtcatccaagactatgacaa +ccagcatgagcaggatcgacccaccccctcgcctgccccttctcgccctttttcggttcttcgcgctaatga +tgttttatggctttc-----------------------------tcttactgccgccgagtacgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctcggatactgtcacatttgt---caacgtggct +acaggagcccaggctgtcgcccgttccctcgactggtctaaagttactctggacggccgccctcttactact +at-----ccagcagtattccaaaacattttatgttc-tcccgcttcgcggaaagctttctttttgggaggcc +gggacgactaag--gccggctacccctataattacaacacaactgctagtgatcagattctgattgaaaatg +cggctggtcat------cgtgttgctat-ttccacgtacaccaccagcttggg--------------cgctg +gccctgtgtctgtttc-tgcagtcggtgttttagctccacattcggcccttgcagtccttgaagacactatt +gact---------accccgcccgtg----cccacacttttgatgatttttgcccggagtgtcgcgctc---t +tggtttgcaggggtgtgccttccagtc--------tactattgctgagcttcagcgcct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattaa-tt----t--cctt---t------gt +gccc-cct--------tc-atag-cttt-----gt-ct---t----------------attt-c-------t +ttttttct----gc----------------gtttcgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaa----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH504134.1/17237/1-7237 |Hepeviridae isolate HEV_30_London_UK_NA, complete genome +---------------------------gcag-acca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagttggtttttcggcctgaagtgctctggaatcatcctatccaacgggt +tatccataatgaacttgaacagta---ctgtcgagccc-gagctggtcgttgtttagaggttggggcccacc +caagatccattaatgacaacccaaatgttcttcaccggtgctttctacgaccagtagggagagatgttcagc +gttggtactctgcccctacccgcggccctgcggctaactgccgccgctctgccttgcgtggcctcccccccg +ttgatcgtacctactgttttgatggattctcccgctgctcatttgccgcagaaactggggttgccctttatt +ccctgcatgacctctggccggccgatgttgcggaggctatggcccgacacgggatgacacgcttgtatgctg +cactacatctc-ccccctgaagtactattaccacccggtacttaccatacaacttcataccttctgattcac +gacggtgatcgtgctgttgtgacctatgaaggtgacactagtgcaggctacaaccatgatgtttccatactt +cgtgcatggatccgtacaactaagatagtcggcgatcatccgctggtgatagagcgtgtgcgggctattggt +tgccattttgtgctgctgcttactgcagcccctgagccgtcaccaatgccttatgttccatacccccgatcg +acagaggtgtatgttcgctctatattcggccctggc---------gggtccccatccctattcccatcagct +t----------gctctacgaaatcca-catttcacgctgtcccggttcatatttgggaccggctcatgcttt +ttggcgctactctggatgatcaggcgttttgctgctcacggcttatgacctacctccgcgggattagttaca +aggtcactgttggcgcccttgttgctaacgaggggtggaatgcttcggaggacgctcttaccgctgttatta +ctgcagcgtatttgaccatttgccatcagcgttacctccgtactcaagctatatccaagggtatgcgccgac +tggaggttgagcatgcccaaaaatttattacaagactttatagttggctgttcgagaagtc---------cg +gccgtgactatatccccggccgccagctccagttctatgcgcagtgccgccgttggttatcggcgggattcc +atcttgacccaagggtgcttgtttttgatgagtctgtgccctgc---cgctgtaggacatttcttaagaa-- +----agctgtgggtaagttctgctgctttatgaagtggttgggacagga------gtgcacctgctttttag +----------------aaccagcagagggtctagttggcgaccatggc--------cacgataatgaagcct +atgagggctctgaggtcgatcaagccgagcccgcccatctcgatgtttctgggacttatgccgtccatggcc +gccagcttgaggccctgtatagggcgcttaacatcccgcacgacatcgctgcccgagcctcccgtttgactg +ccaccgtcgaactcgttgcaggcccagaccgcttggagtgccgcactgtgctcgggaataagattttccgga +cgacggtggctgatggcgcccatcttgaggcaaacggccc------------------------cgagcagt +atgttctttcgttcgacgcctctcgccagtctatgggggccgggccgcatagtctctcctacgagctcactc +ccgctggtttgcaggtcaagatctcatct-------aatggcctggattgcactgcaatattcccc---ccg +ggcggggcccctagcgctgctccgggcgaggtagcagcattttgcagtgcccttcacaggtataacaggttt +actcagcgccattcgcttataggtggcttgtggctgcaccctgaggggttgctgggcatcttcccccctttt +tctcccgggcacctttgggagtctgctaaccctttttgtggggagggaaccttgtacacccggacatggtcg +acatctggtttttctagtgacttttccccccctgaggcagccgtcgcggcgccggctgctactcc----ggg +gttgcgcc---accccacacctcctgttagtgatat-----------------ttgggtgtt---------- +---------accgccaccc----tccgaagaat--------------ttcaggttgatacagcgcccactcc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcctgctcaaccatctaac +tccgccgggccaaag-------------------------------------gttcccgtgcataagccgcc +agcgccacc--------------------------------------atcctcgcgcacccgccgcc----- +-------------------ttctttacacctatccggatggggcaaaggtgtatgcgggatcactgtttgag +tctgactgtgactggttggttaacgcgtcgaatcccggtcatcgtcctggaggtggcctttgccatgccttc +taccaacgctaccccgagtctt------ttcacccaactgagttcatcatgcgcgacgg---tcttgccgcg +tacactctaactccccggcctattattcatgcagtggctcctgattatagggttgagcataacccaaagagg +cttgaggcagcataccgagagacttgctctcgccgtggtaccgccgcctacccactccttggttcgggcata +taccaagttcccgttagcctcagcttcgacgcttgggagcgtaatcaccgccccggggacgagctctactta +accgatctcgccgctacc-------------------------------------------------tggtt +tgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------gccggccctcacaataactgaggatgcagc +cc------------gcacagccaacctggcattggagatcg------------atgctgctactgaggtcgg +ccgggcttgt---gccggctgcgcagttagccctggggtcgtgcactatcagtttactgctggggtcccggg +ttcggggaagtcgcgttctatacagcagggggatgttgacgtagtggttgttcccactcgggagctccggaa +tagttggcgtcgccggggtttcgcagcttttacacctcatacggcggcccgtgtcaccacgggccgccgtgt +tgtgattgatgaggccccatccctcccaccgcatctgttgctactacacatgcagcgggcctcgtcggtcca +ccttctcggcgacccaaaccagatccctgccatagactttgaacatgccggcctggtccccgcgatacgccc +tgagcttgcgcccaccagttggtggtatgttacccaccgctgccccgctgatgtgtgcgagcttatacgcgg +ggcttatcccaaaatccaaaccactagccgcgtgctgcggtctttattctggaatgag------cctgccat +tggccagaagttagttttcacccaggccgctaaggccgccaaccccggtgcgattacagtccatgaggccca +gggcgccactttcacggaaactacaatcatagccacggctgatgctagggggctcatccaatcttcccgagc +tcatgccatagtcgcacttacccgccatacagagaagtgcgttattcttgacgcccccggcctgttacgtga +ggttggtatatcggatgtgattgtcaacaacttt------------------------------ttcctcgc +cggcg--gggaagtgggtcaccaccgcccctctgtgatacctcgcggtaatcctgaccggaacctcgcgac- +-----actacaggcctttccaccttcctgccagtttagtgcctatcaccagttagctgaggaacttggccac +cgcccagctcctgtcgccgccgtcctgcccccgtgccctgagcttgagcaaggcttgttatatatgccgcag +gaacttacggtgtctgatagcgtgctggtctttgaactcacggatatagtccattgccggatggctgccccc +agccagcggaaagccgtcctatcgacgctcgtgggtaggtacggccgtcggacgaagctgtatgaagcagcc +cactctgacgtccgtgagtctctggctagattcatccccactattgggcccgttcaggctactacgtgtgag +ttatatgagctggttgaagccatggtggagaaaggtcaggatggctctgccgtgctcgagcttgacctctgc +aatcgtgatgtatcgcgtattacatttttccagaaggattgtaataaattcaccacaggggagaccattgcc +catggtaaggtcggccagggcatctcggcttggagcaagaccttctgtgccctgtttggtccgtggtttcgt +gctattgaaaaagaaatactagccctgctcccgcctaacattttctacggcgacgcgtacgaggagtctgtg +tttgccgccgctgtgtcgggggcaggttcaagcatg---gtgtttgagaatgatttttcagagtttgatagc +acccaaaataacttctccct------------------tggtctcgagtgtgtagtcatggaggaatgtggc +atgccccagtggctaatccggttgtaccatttggttcggtcggcctggattttacaggcgccgaaggagtct +cttaagggattttggaagaagcattctggtgagcctggcaccctcctttggaacactgtttggaacatggcg +atcatagcacactgctatgaatttcgtgattttagggccgccgctttcaagggagatgactccgtggtcctc +tgtagcgactaccgtcagagccgcaatgcagcggccctgattgcaggctgcgggctcaaactaaaggttgac +tatcgccctattgggttgtatgctggtgtggtggtggcccctggcctggggacgctacccgatgtggtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggctgagcagttgcgcctagctgtc +tgtgacttccttcgagggttaacgaatgttgcgcaggtatgcgtcgatgttgtatcccgag-------ttta +tggagttagccctgggctggtacataaccttattggcatgttgcaaactatagccgatggcaaagcccattt +tacagagactgttaaacctgtgcttgacctcacgaattctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgtgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtaccgcaatccggggctggagctcgccctc +gacagccgccccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgtcccacgtcgtcgatctgcccca---------gttggggctgcgccgttgac +tgccatatcacctgctcctgatacagctcctgtacctgatgttgattcgcgcggagccatattgcgacgcca +gtacaatttatccacatccccgctcacatcgtctgttgcttcgggtactaatctggttctttatgctgcccc +gctaaaccctttgctgccccttcaggatggcaccaacactcacatcatggccactgaggcatctaattatgc +ccagtatcgggttgtccgagctacgattcgttacaggccattggtgccaaatgctgtcggcggttatgcaat +atctatctcattctggcctcagacaactactacccccacgtctgttgatatgaattctattacttccactga +tgttaggatcctagttcagcccggcattgcttctgagttggttatccctagtgagcgcctccattatcgtaa +ccagggctggcgctctgtggagacctcgggtgtggctgaagaggaggctacttctggtttggtaatgctttg +tatccatggctcccctgttaattcctataccaataccccctataccggggcgcttggactccttgatttcgc +tttagagcttgagtttaggaacctgacacccgggaacaccaacacccgtgtgtcccggtatacaagcacagc +ccgtcatcggctgcgtcgcggtgctgatggcactgctgaacttaccaccacagcggccacgcgtttcatgaa +ggacctgcacttca---ccggtacgaat---ggggtcggtgaggtgggtcgtggtattgctctcacactctt +taatctcgctgacacgcttctcggtggtttgccgacagaattaatttcgtcggctgggggacagttattcta +ctcccgtcccgtcgtctcagccaatggcgagccgactgtcaagttatatacatctgtagagaatgcacagca +ggataaagggatcgctatcccacatgatatagatctgggtgactcccgtgtggtcatccaagactatgacaa +ccagcatgagcaggatcgacccaccccctcgcctgccccttctcgccctttttcggttcttcgcgctaatga +tgttttatggctttc-----------------------------tcttactgccgccgagtatgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctcggatactgtcacatttgt---caacgtggct +acaggagcccaggctgttgcccgttcccttgactggtctaaagttactctggacggccgccctcttactact +at-----ccagcagtactccaaaacattttatgttc-tcccgcttcgcggcaagttatcattctgggaggct +gggacgactaag--gccggctacccttataactacaacacaactgctagtgatcagattctgattgaaaatg +cggctggtcat------cgtgtagccat-ctccacgtataccaccagcttggg--------------cgccg +gccctgtgtctgtttc-tgcagtcggtgttttagccccacactcggctcttgcagtccttgaagacactatt +gact---------accctgcccgtg----cccacacttttgatgatttctgcccggagtgtcgcgctc---t +tggtttgcaggggtgtgcttttcagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaatcaa-tt----t--cctt---t------gt +gccc-cct--------tc-atgg-cttt-----gc-tt---t----------------attt-c-------t +ttttttct----gc----------------ggttcgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaa----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH504135.1/17237/1-7237 |Hepeviridae isolate HEV_29_Southampton_UK_021214, complete genome +---------------------------gcag-acca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagttggtttttcggcctgaagtgctctggaatcatcctatccaacgggt +tatccacaatgaacttgaacagta---ctgtcgggccc-gggctggtcgttgtctagaggttggggcccacc +ctagatccatcaatgacaacccaaatgttctacaccggtgcttcctgcgaccagttgggagggatgttcagc +gctggtactctgctcccacccgcggccctgcggctaactgccgccgttctgccttgcgaggcctccctcctg +ttgatcgtacctactgttttgatggattctcccgctgttcatttgctgcagaaactggggttgctctttatt +ctctgcatgacctctggccggccgatgttgcggaggctatggcccggcacgggatgacacgtttgtatgctg +cactacatctc-ccccctgaagtactgctaccacccggtacttaccatacaacttcatacctcctgattcac +gacggtgatcgtgctgttgtaacctatgagggtgatactagtgcaggctacaaccatgatgtctccatactt +cgtgcatggatccgcacaactaagatagtcggcgatcatccgctggtgatagagcgtgtgcgggctattggt +tgccatttcgtgctgctgcttactgcagcccctgagccgtcaccaatgccttatgttccatacccccggtcg +acagaggtgtatgtccgctctatattcggccctggc---------gggtccccatccctattcccatcagct +t----------gctctactaaatcca-catttcacgctgtcccggttcatatttgggaccggctcatgcttt +ttggcgctactctggatgatcaggcattttgctgttcacggcttatgacctacctccgcgggattagttaca +aggtcactgttggcgcccttgtcgctaatgaggggtggaatgcttcggaggacgctcttaccgctgttatta +ctgcagcgtatttgaccatttgccatcagcgttatctccgtacccaggctatatccaagggtatgcgccgac +tggaggttgagcacgcccaaaaattcattacaagactttatagttggctgttcgagaagtc---------cg +gacgtgactatatccccggccgtcagctccagttttatgcacagtgccgccgttggttatcggcgggtttcc +atcttgacccaagggtgcttgtttttgatgagtctgtgccctgc---cgttgtaggacatttcttaagaa-- +----ggctgtgggtaagttctgctgttttatgaagtggttgggacagga------gtgcacctgcttcttgg +----------------aaccagcagagggtctagttggcgaccatggc--------cacgataatgaagcct +atgagggctctgaggtcgatcaggccgagcccgcccatcttgatgtttctgggacttatgccgtccatggcc +gccaacttgaggccctgtatagggcgcttaacatcccgcatgatatcgccgcccgagcctcccgtttgactg +ccaccgtcgaactcgttgcaggtccagaccgcttggagtgccgcactgtgctcgggaataagacttttcgga +cgacggtggttgatggcgcccatcttgaggcgaacggccc------------------------cgagcagt +atgttctttcgtttgacgcctctcgccagtctatgggggccgggccgcatagtctctcctacgagctcactc +ctgctggtttgcaggtcaagatatcatcc-------aatggcctggattgcactgcaacattcccc---ccg +ggcggcgcccctagcgccgccccgggagaggtagcagccttttgcagtgccctttacaggtataacagattc +actcagcgccattcgcttataggcggcttgtggctgcatcctgaggggttgttgggtatcttcccccctttc +tctcctgggcacctttgggagtccgctaaccctttttgtggggagagaaccttgtacacccggacatggtca +acatctggtttttctagtgacttttccccccctgaggcagccgtcgcagcgccggctgctacccc----ggt +gttccgtc---accctacacctcccgctagtgacat-----------------ttgggtgtt---------- +---------accgccacct----tctgaggaat--------------ttcaggttgacacagcgcccgctcc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcccgctcaactacctagc +cccgctgggccaaaa-------------------------------------gctcccgtgcgtaagccgcc +aacaccacc--------------------------------------atccccgcgcacccgccgcc----- +-------------------ttctttacacctatccggatggggcaaaggtttacgcggggtcactgtttgag +tctgactgtgattggctggtcaatgcgtcgaatcccggccatcgtccaggaggcggcctttgccatgccttc +taccaacgctaccccgagtctt------ttcacccaactgagttcattatgcgcgacgg---tctagccgcg +tacactttaactccccggcctattattcatgcagtggctcctgattatagggttgagcataacccaaagagg +cttgaggcagcataccgagagacttgctctcgccgcggtaccgccgcctatccactcctcggctcgggcata +taccaagttcccgttagcctcagctttgacgcctgggagcgtaaccaccgccccggggacgagctctaccta +accgacctcgccgctacc-------------------------------------------------tggtt +tgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------gccggccctcacaataactgaggatgcagc +tc------------gcacagccaacctggcgctggagatcg------------atgccgctacggaggttgg +ccgggcgtgt---gccggctgtgcagttagtcctggggttgtgcactatcagtttactgctggggtcccagg +ttcggggaagtcgcgttctatacagcagggggatgttgacgtagtggtcgttcccactcgggagctccggaa +tagttggcgccgccggggttttgcagcttttacacctcatacggcggcccgtgtcaccacgggccgccgtgt +tgtgattgatgaggccccatccctcccaccgcatttgttgctactacatatgcagcgagcctcgtcggtcca +ccttcttggcgacccaaaccagatccctgccatagacttcgagcacgccggcctggtccccgctatacgccc +tgagcttgcacccaccagttggtggcatgtcacccatcgctgccccgctgacgtgtgcgagcttatacgtgg +ggcttatcctaaaatccaaaccactagccgcgtgctgcggtctttattctggaatgag------cctgccat +tggccagaagttagttttcacccaggctgctaaggccgccaatcccggagcgatcacagtccacgaggccca +gggcgccactttcacggaaactacgatcatagccacggctgatgctagggggctcatccaatcttcccgagc +tcacgccatagtcgcacttacccgtcacacagagaagtgcgttattcttgacgcccctggcttgttacgtga +ggttggtatatcggatgtgattgttaacaacttt------------------------------ttcctcgc +tggcg--gggaggtaggtcaccatcgcccctctgtgatacctcgcggtaaccctgaccagaacctcgcggt- +-----actacaggcttttccaccttcttgccagattagtgcctatcaccagttagctgaggaacttggccac +cgcccagctcccgtcgccgctgtcttgcccccctgccctgaacttgagcaaggcttgttatacatgccgcag +gagctcacggtgtctgatagcgtgctggtcttcgaactcacggacatagtccactgccggatggctgccccc +agccagcggaaggccgtcctatcgacgcttgtgggtaggtacggccgtcggacgaagctgtatgaagcagct +cactctgacgtccgcgagtccctggctagattcatccccaccattgggcccgttcaggccactacgtgtgag +ttatatgagctggttgaggccatggtggagaaaggtcaggatggctctgccgtgcttgagctcgacctttgc +aatcgtgatgtatcgcgtatcacatttttccagaaagattgtaataaattcaccacaggggagaccattgcc +catggtaaggtcggccagggcatctcggcttggagtaagaccttctgtgccctgtttggtccgtggtttcgt +gctattgaaaaagaaatactagccctgctcccgcctaatattttctacggcgacgcatacgaggagtctgtg +tttgccgccgctgtgtcaggggcaggctcaagcatg---gtatttgagaatgatttttcagagtttgatagc +acccaaaataacttctccct------------------tggtctcgagtgtgtagtcatggaggagtgtggc +atgccccagtggctaatccggttgtaccatttggttcggtcggcctggatcttacaggcgccgaaggagtct +cttaagggattttggaagaagcattctggtgagccaggcaccctcctctggaacactgtttggaatatggcg +atcatagcgcattgctatgaatttcgtgattttagggtcgccgctttcaagggagatgattccgtggtcctc +tgtagcgactaccgtcagagccgcaatgcggcggccctgattgcaggttgtgggctcaaattgaaggttgac +tatcgccctattgggctgtatgcaggtgtggtggtggcccccggcctggggacgctacccgatgtagtgcgc +tttgctggccggctgtctgagaagaactggggccctgggccggagcgagccgagcagttgcgccttgctgtt +tgtgacttccttcgagggttaacgaatgttgcgcaggtatgtgttgatgtcgtatcccgag-------ttta +tggggttagccctgggctggtacataaccttattggcatgttacaaaccatagctgatggcaaagcccattt +tacagagactgttaaacctgtgcttgacctcacgaattctattatacagcgggtggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcatcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtaccgcaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgtgatcagtccca----------- +------gcgcccctccgctgtcccacgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgccatatcacctgcccccgatacagcccccgtacctgatgttgactcgcgcggcgccatattgcgacgcca +gtataatttatccacatccccgctcacatcatctgtcgcttcgggtactaatctggtcctttatgctgcccc +gctaaaccctttgctgccccttcaggatggcactaacactcacattatggccactgaggcatctaattatgc +ccagtatcgggttgtccgagctacgattcgttacaggccactggtgccaaatgctgttggcggttatgcaat +atccatttcattctggcctcagaccactactacccccacgtctgttgatatgaactctattacttccactga +tgttaggattctagttcagcccggtattgcctctgagttagttatccccagtgagcgcctccactatcgtaa +tcagggctggcgctctgtggagacctcgggtgtggctgaagaggaggctacttctggtttggtaatgctttg +tatccatggctctcctgttaattcctacaccaataccccctataccggggcgcttggactccttgatttcgc +tttagagcttgagtttaggaacctgacacccgggaacaccaacacccgtgtgtcccggtatacaagcacagc +ccgtcatcggctgcgccgcggtgctgatggcaccgctgaacttaccaccacagcggccacgcgcttcatgaa +ggacctgcacttca---ccggcacgaat---ggggtcggtgaggtgggtcgtggtattgctctcacactctt +taatctcgctgatacgcttctcggtggtttgccgacagaattaatttcgtcggctgggggacagttattcta +ctcccgccccgtcgtctcagccaatggcgagccgactgtcaagttatacacatctgtagagaatgcgcagca +ggataaagggatcgctattccacatgacatagatctgggtgactcccgtgtggtcatccaggactatgacaa +ccagcatgagcaggatcgacccaccccctcgcctgccccttctcgccccttttcggttcttcgcgctaatga +tgttctatggctttc-----------------------------tcttactgccgccgagtatgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctcggatactgtcacatttgt---caacgtggct +acaggagcccaggctgtcgcccgttccctcgattggtctaaagttactctggacggccgccctcttactact +at-----ccagcagtactccaaaacattttatgttc-tcccgcttcgcgggaagttatctttttgggaggcc +gggacgactaag--gctggttatccctataattacaacacgactgctagtgatcagatcctgattgaaaatg +cagctggtcat------cgtgttgctat-ttccacatataccaccagtttggg--------------cgctg +gccctgtgtctgtttc-tgcagtcggtgttttagccccacattcggcccttgcagttcttgaagacactatt +gatt---------accctgcccgtg----ctcacacttttgatgatttttgcccggagtgtcgcactc---t +tggtctgcaggggtgtgccttccagtc--------tactatcgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaatcaa-tt----t--cctt---t------gt +gccc-cct--------tc-atag-tttt-----gc-tt---t----------------attt-c-------c +ttttttct----gc----------------ggtccgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaa----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH504136.1/17218/1-7218 |Hepeviridae isolate HEV_28_Gloucester_UK_251114, complete genome +-------------------------------------cgtatg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagttggttttccgacctgaagtgctctggaatcatcctatccaacgggt +tatccacaatgaacttgaacagta---ctgtcgggccc-gggctggtcgttgtctagaggttggggcccacc +caagatccatcaatgacaacccaaatgttctgcaccggtgcttcctacgaccagttgggagagatgttcagc +gctggtactctgctcctacccgcggccctgcggctaactgccgccgttctgccttgcgtggccttccccccg +ttgatcgtacctattgttttgatggattctcccgctgctcatttgccgcagagactggggttgccctttact +ctctgcatgacctctggccggccgatgttgcggaggctatggcccgacacgggatgacacgcttgtatgctg +cactacatctc-ccccctgaagtactactaccacctggtacttaccatacaacttcataccttttgattcac +gacggtgatcgtgctgttgtgacctatgaaggtgacactagtgcaggctacaatcatgatgtttccatactt +cgtgcatggatccgcacaactaaaatagttggcgaccatccgctggtgatagagcgtgtgagggctattggc +tgccactttgtgctgctgcttactgcagcccctgagccgtcaccaatgccttatgttccatatccccggtcg +acagaggtgtatgtccgctctatattcggtcctggc---------gggtccccatccctattcccatcagct +t----------gctctacgaaatcta-catttcacgctgtcccagttcatatttgggaccggctcatgcttt +ttggcgctactctggatgatcaggcgttttgctgttcacggcttatgacctacctccgcgggattagctaca +aggtcactgttggcgcccttgtcgctaatgaggggtggaatgcttcggaggacgctctcaccgctgttatta +ctgcagcttatttgaccatttgccaccagcgttacctccgtactcaagccatatccaaaggtatgcgccgat +tggaggttgagcatgcccaaaaatttattacaagactttatagttggttgttcgagaagtc---------cg +gccgtgactacatccccggccgccagctccagttttatgcacagtgccgccgttggttatcggcgggtttcc +atcttgacccaagggtgcttgtttttgatgagtctgtgccctgc---cgttgtaggacatttcttaagaa-- +----ggctgtgggtaagttctgctgttttatgaagtggttgggacagga------gtgcacctgcttcttgg +----------------aaccagcagagggtctagttggcgaccatggc--------catgataatgaagcct +atgagggctctgaggtcgatcaggccgagcccgcccatctagatgtttctgggacttatgccgtccatggcc +gccaacttgaggccctgtatagggcacttaacatcccgcatgacattgctgcccgagcctctcgtttgactg +ccaccgtcgaacttgttgcaggtccagaccgtttggagtgccgcactgtgcttgggaataagactttccgga +cgacggtggttgatggcgcccatcttgaggcgaacggccc------------------------cgagcagt +acgtcctttcgtttgacgcctctcgccagtctatgggggccgggccgcatagcctctcctatgagctcaccc +ctgctggcttgcaggttaggatttcatct-------aatggcctggattgcactgcgacattcccc---cag +ggcggggcccctagcgccgccccgggggaggtggcagccttttgcagtgccctctacaggtataataggttt +acccagcggcattcgcttacgggcggcttgtggctgcatcctgaggggttattgggtatcttcccccccttt +tcccccgggcatctctgggagtccgctaatcctttttgcggggaggggaccttgtacacccggacatggtca +acatctggtttttctagtgatttttccccccctgaggcagccgttgcagtgccagctgttactcc----ggg +gttacgtg---accctacaccccctgctagcggcat-----------------ttgggtgtt---------- +---------accaccaccc----tctgaagaac--------------ttcaggttgatacagcccccgctcc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcccgctcagccatctagc +cccgctgggccaaag-------------------------------------gcccccgtgcgtaagccgcc +aacaccacc--------------------------------------atccttgcgcgcccgccgcc----- +-------------------ttctttacacctatccggatggggcaaaggtgtatgcggggtcactgtttgag +tctgactgtgattggctggtcaatgcgtcgaatcccggccatcgtcccggaggcggtctttgccatgccttc +taccaacgctaccccgagtctt------tccatccaactgagtttattatgcgcgacgg---tcttgccgcg +tacactttaactccccggcctattattcatgcagtggcccctgattatagggttgagcataacccaaagagg +cttgaggcagcataccgagagacttgctctcgccgcggtaccgccgcctatccactcctcggctcgggcata +taccaagttcccgtcagcctcagctttgacgcctgggagcgtaaccaccgccccggggacgagctttactta +accgacctcgccgctacc-------------------------------------------------tggtt +cgaggctaataagccagcaca--------------------------------------------------- +------------------------------------------gccggccctcacaataactgaggatgcagc +cc------------gtacagccaacctagcactggagatcg------------atgctgctacggaggtcgg +ccgggcttgt---gccggctgtgcagttagtcctggggttgtgcactatcagtttactgccggggtaccagg +ttcggggaagtcgcggtctatacagcagggggatgtcgatgtggtggttgttcccactcgagagcttcggaa +cagctggcgccgccggggttttgcagcttttacacctcacacggcggcccgtgttaccaagggccgtcgcgt +tgtgattgatgaagccccttctctcccaccgcacttgctgctactacacatgcagcgggcctcgtcggtcca +tcttcttggcgacccaaaccagatccctgctatagacttcgagcatgctggtctggttcccgcaatacgccc +tgagcttgcgcccaccagttggtggcatgttacccatcgctgccccgctgacgtgtgcgagcttatacgcgg +ggcttatcctaaaattcaaaccactagccgcgtgctgcggtctttattctggaatgag------cctgccat +tggccagaagttagttttcacccaggctgctaaggccgccaaccccggtgcgattacagtccacgaggccca +gggcgccactttcacggaaactacaatcatagccacggctgatgctagggggctcatccaatcttcccgagc +tcacgccatagtcgcacttacccgccacacagagaagtgcgttattcttgacgcccccggcttgctacgtga +ggttggtatatcggatgtgattgttaacaatttt------------------------------ttcctcgc +cggcg--gggaggtgggtcaccatcgcccctctgtgatacctcgcggtaaccctgaccagaacctcgcgac- +-----actacaggcctttccaccttcctgccagataagtgcttatcatcagttagctgaggaactaggccac +cgcccagcccccgtagctgccgtcctgcccccttgccctgagcttgagcagggcctgctgtatatgccgcaa +gagctcacggtgtcagatagcgtgttggtctttgaactcacggacatagtccactgccggatggccgcccct +agccagcggaaggccgtcctatcgacgctcgtgggtaggtacggccgtcggacgaagctgtatgaagcagct +cactctgacgtccgtgagtccctggctagattcatccccaccatcgggcccgttcaggctactacgtgtgaa +ttatatgagctggttgaggccatggtggagaaaggtcaggatggctctgccgtgcttgagctcgacctctgc +aaccgtgacgtatcgcgtatcacatttttccagaaagactgtaacaaattcaccacaggtgagaccattgcc +cacggcaaggtcggccagggcatctcggcttggagcaagaccttttgtgccctgtttggtccgtggtttcgt +gctattgaaaaagaaatacttgccctgctcccgcctaatatcttctacggcgacgcgtatgaggagtctgtg +tttgctgccgctgtgtctggggcaggttcatccatg---gtatttgagaatgatttttcagagtttgatagc +acccaaaataacttctccct------------------tggtctcgagtgtgtaattatggaggaatgtggc +atgccccagtggctaatccggttgtaccatttggttcggtcggcctggaccctacaggcgccgaaggagtct +ctcaagggattttggaagaagcattctggtgagccaggcaccctcctttggaacactgtttggaatatggcg +atcatagcacactgctatgaatttcgtgattttagggttgccgctttcaagggagatgattccgtggtcctc +tgtagcgactaccgtcagagccgcaatgcagcggccctgattgcaggttgcgggctcaaactgaaggttgac +taccgtcctattgggttgtatgctggtgtggtggtggcccctggcctggggacgctacccgatgtggtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggctgagcagttgcgcctagctgtt +tgtgatttccttcgagggttaacgaatgttgcgcaggtatgtgttgatgttgtatcccgag-------ttta +tggagttagccctgggctggtacataaccttattggcatgttgcaaaccatagctgatggcaaagcccattt +tacagagactgttaaacctgtgcttgatctcacgaattctattatacagcgggtggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgttccgcaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgtcccacgccgtcgatctgcccca---------actggggctgcgccgttgac +cgccacatcacccgcccctgataccgcccctgtacctgatgttgattcgcgcggcgctatattgcggcgcca +gtacaatttatccacatccccgctcacatcatctgttgcttcgggtactaatctggttctttatgctgcccc +gctaaaccctttgctgccccttcaggatggcaccaacactcacatcatggccactgaggcatctaattatgc +ccagtatcgggttgtccgagccacgattcgttacaggccattggtgccaaatgctgttggtggctatgcaat +atccatttcattctggccacagactactactacccctacgtctgttgatatgaattctataacctctactga +tgtcaggattctggtccagcctggtattgcttctgagttagttatccctagtgagcgcctccattatcgtaa +ccagggctggcgttctgtggagacctcgggtgtggctgaggaggaggccacttctggtttggtgatgctctg +tatccatggctcccctgttaactcttacaccaacaccccctataccggggcgcttggactccttgatttcgc +tttagagcttgagtttaggaacctgacacccgggaacaccaacacccgagtttctcggtatacaagcacagc +ccgtcatcggctgcgccgcggtgctgatggcaccgccgaacttaccactacagcggccacgcgcttcatgaa +ggacctgcacttca---ccggtacgaat---ggggtcggtgaggtgggtcgtggtattgctctcacactctt +taatcttgctgacacgcttctcggtggtttgccgacagaattaatttcgtcggctgggggacagttattcta +ctcccgccccgttgtctcagccaatggcgagccgactgtcaagttatacacatctgttgagaatgcacagca +ggataaagggatcgccatcccacatgacatagatctgggtgactcccgtgtggtcatccaagactatgacaa +ccagcatgagcaggatcgacccaccccctcgcctgccccttctcgccctttttcggttcttcgcgctaatga +tgttctttggctttc-----------------------------tcttaccgccgccgagtacgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctctgacactgtcacatttgt---caacgtggct +acaggggcccaggcagtcgcccgctcccttgactggtctaaagttactctggatggccgcccccttactacc +at-----ccagcagtactctaaaacattttatgtcc-tcccgcttcgtgggaagttgtccttctgggaggcc +gggacaactaag--gctggttacccctataattacaacacaactgctagtgatcagattctgattgaaaatg +cggctggtcat------cgtgttgctat-ttccacgtataccaccagcttggg--------------cgctg +gccctgtgtctgtttc-tgcagttggtgttttagccccacattcggcccttgcagtccttgaagatactatt +gatt---------accccgcccgcg----cccacacttttgatgatttctgcccggagtgtcgcgctc---t +tggtttgcaggggtgtgccttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattaa-tt----t--cctt---t------gt +gccc-cct--------tc-atag-cttt-----gc-tt---t----------------attt-c-------t +ttttttct----gc----------------ggttcgcgctccctg---------------------gaaaa- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH504137.1/17237/1-7237 |Hepeviridae isolate HEV_27_Poole_UK_111114, complete genome +---------------------------gcag-acca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagttggtttttcgacctgaagtgctctggaatcatcccatccaacgggt +tatccataatgaacttgaacagta---ctgtcgggccc-gggctggccgttgtctagaggttggggcccacc +caagatccattaatgacaatccaaatgttctgcaccggtgctttctacgaccagttgggagagatgttcagc +gctggtactctgctcctactcgtggccccgcggctaactgccgccgttctgccctgcgcggcctcccccctg +ttgatcgtacctattgttttgatggattctcccgctgttcatttgccgcagaaaccggagttgccctttatt +ctctgcatgacctctggccggctgatgttgcagaggctatggcccggcacgggatgacacgcctgtatgctg +cactacatctc-ccccctgaagtactactaccacccggtacttaccatacaacttcataccttctgattcac +gacggtgatcgtgctgttgtgacctatgaaggcgatactagtgcaggctacaaccatgatgtttccatactt +cgtgcatggatccgcacaactaagatagtcggcgaccatccgctggtgatagagcgtgtgcgggctatcggc +tgccattttgtgctgctgcttactgcagcccctgagccgtcaccaatgccttacgttccatacccccggtcg +acagaggtgtatgtccgctctatatttggccctggc---------gggtctccatccctattcccatcagct +t----------gctctacgaaatcca-catttcacgccgttccggttcatatttgggaccggctcatgcttt +ttggcgctactctggatgatcaggcgttctgctgttcacggcttatgacctacctccgcgggattagttaca +aggtcactgttggcgcccttgtcgctaatgaggggtggaatgcttcggaggacgctctcaccgctgttatca +ctgcagcgtatttgaccatttgccatcagcgttacctccgtactcaagctatatccaaaggtatgcgtcgac +tggaggttgagcatgcccaaaaattcattacaagactttatagttggctgtttgagaagtc---------cg +gccgtgactatatccccggccgtcagctccagttttatgcacagtgccgccgttggctatcggcaggttttc +atcttgacccaagggtgcttgtttttgatgagtctgtgccctgc---cgttgtaggacatttcttaagaa-- +----ggccgtgggtaagttctgctgttttatgaagtggttgggacagga------gtgtacctgctttttgg +----------------aaccagcagagggtctagtcggcgaccatggc--------cacgataatgaagcct +atgagggctctgaggttgatcaggccgagcccgcccatctcgatgtttctgggacctatgccgtccatggcc +gccaacttgaggccctgtatagggcgcttaacatcccacatgatatcgctgcccgagcctcccgtttgactg +ccaccgtcgaactcgttgcaggtccagaccgtttggaatgtcgcactgtgcttgggaacaagactttccgga +cgacggtggttgatggcgcccatcttgaggcgaacggccc------------------------cgagcagt +acgttctttcgtttgacgcctctcgccagtctatgggggccgggccgcatagtctctcctacgaactcactc +ctgctggtctgcaggtcaagatttcatct-------aatggcctggattgcactgcaatattcccc---ccg +ggcggggctcctagcgctgctccgggggaggtagcagccttttgcagtgccctttacagatacaacaggttc +actcagcgccattcgcttataggtggcctgtggctgcatcctgaggggttgttgggtatcttcccccctttc +tctcccgggcacctctgggagtccgctaaccctttttgtggggagggaaccctgtacacccggacatggtct +acatctggtttttctagtgacttctccccccccgaggcagccgccgcagcgccggttgctgcccc----ggg +gctgcgcc---accctacacctcctgttagtgacat-----------------ttgggtgtt---------- +---------accgccgccc----tctgaagaat--------------ttcaggttgacacagtgcccgctcc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccccgagcccgctcaaccatctaac +cccgctgggccaaag-------------------------------------gctcccgtgcgtaagccgcc +aacgccgcc--------------------------------------atccctgcgcacccgccgcc----- +-------------------ttctttacacctatccggatggggcaaaggtgtatgcgggatcactgtttgag +tctgactgtgattggctggttaatgcgtcgaatcccggccatcgccctggaggtggcctctgccatgccttc +taccaacgctaccccgagtctt------tccacccaactgagttcattatgcgcgacgg---tcttgccgcg +tacactttaaccccccggcctattattcatgcagtggcccctgattatagggttgagcataacccaaagagg +cttgaggcagcgtaccgagagacttgctctcgccgcggtaccgccgcctacccactcctcggctcgggtata +taccaagtccccgtcagcctcagctttgacgcttgggagcgtaaccaccgccccggggatgagctctatcta +actgacctcgccgccacc-------------------------------------------------tggtt +cgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------gccggccctcacaataactgaggatgcagc +cc------------gtacagccaacctagcactggagatcg------------atgctgctacggaggtcgg +ccgggcttgt---gccggctgcgcagttagtcctggggttgtgtactatcagtttactgctggggtcccagg +ttcggggaagtcgcgttctatacagcagggggatgttgacgtagtggttgttcccactcgggagctccggaa +tagttggcgtcgccggggttttgcggcttttacacctcatacggcggcccgtgtcaccacgggccgtcgtgt +tgtgattgatgaggccccatccctcccaccgcatttgttgctactacacatgcagcgggcctcgtcggtcca +ccttcttggcgacccaaaccagatccctgccatagacttcgagcatgccggcctggtccccgcaatacgccc +tgagcttgcgcccaccagttggtggcatgtcacccatcgctgccccgctgatgtgtgcgagcttatacgcgg +ggcttatcccaaaatccaaaccactagccgcgtgctgcggtctttattctggaatgag------cctgccat +cggccagaagttagttttcacccaggctgctaaggctgccaaccccggtgcgatcacagtccacgaggccca +gggcgctactttcacggaaactacaatcatagccacggctgatgctagggggctcattcaatcctcccgagc +ccatgctatagtcgcacttacccgccacacagagaagtgcgttattcttgatgcccccggcttgttacgtga +ggtcggtatatcggatgtgattgtcaacaatttc------------------------------ttccttgc +cggcg--gggaggtgggtcaccaccgcccctctgtgatacctcgcggcaatcctgaccagaacctcgcgac- +-----actacaggccttcccaccttcctgccagattagtgcctatcaccagttagctgaggaacttggccac +cgcccagctcccgttgccgctgtcttgcccccttgccctgaacttgagcagggcctgttatatatgcctcag +gagcttacggtgtctgatagcgtgctggtctttgaactcacggacatagtccactgccggatggccgccccc +agccagcggaaggccgtcctatcgacgctcgtgggtaggtacggccgtcggactaagctgtatgaagcagct +cactctgacgtccgtgagtccctggctagattcatccccaccattgggcccgttcgggctactacgtgtgag +ttatatgagctggttgaggccatggtggagaaaggtcaggatggctctgccgtgcttgagctcgacctctgc +aaccgtgatgtatcgcgtatcacatttttccagaaagattgtaacaaattcaccacaggggagaccattgcc +cacggtaaggtcggccagggcatctcggcttggagtaagaccttctgtgccctgtttggcccgtggtttcgt +gccattgaaaaagaaatactagccctgctcccgcctaatattttctacggtgacgcatacgaggagtctgtg +tttgccgccgctgtgtcaggggcaggctcaagcatg---gtgtttgagaatgatttttcagagtttgatagc +acccaaaataacttctccct------------------tggtcttgagtgtgtagtcatggaggaatgtggc +atgccccagtggctaatccggttgtaccatctggtccggtcggcctggatcctgcaggcgccgaaggagtct +cttaagggattttggaagaagcattctggtgagcccggcacccttctctggaatactgtttggaatatggcg +atcatagcacactgctatgaatttcgtgactttagggttgccgctttcaagggagatgactctgtggtcctt +tgtagcgactaccgtcagagccgcaatgcagcggccctgattgcaggttgcgggctcaaattgaaggttgat +tatcgccctattgggttgtatgctggtgtggtggtggcccctggcctggggacgctacccgatgtggtgcgc +tttgctggccggctgtctgagaagaactggggccctgggccggagcgggctgagcagttgcgcctagctgtt +tgtgactttcttcgagggttaacgaatgttgcgcaggtatgtgttgatgttgtatctcgag-------ttta +cggagttagccctgggctggtacataaccttattggtatgctgcaaaccatagctgatggcaaagctcattt +tacagagactgttaaacctgtgcttgacctcacgaactctatcatacagcgggtagaatgaataacatgtt- +t----------------tgtgcactgcccatggg------------atcaccatgcgccctagggttgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtaccgcaatccgggactggagctcgccctc +gacagccactccg---------------ccccctcggctcctcttggcgcgatcagtccca----------- +------gcgcccctccgctgccccacgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgccgtgtcacctgctcccgatacagctcctgtacctgatgttgactcgcgcggcgccatactgcgacgcca +gtataatctatccacatccccgctcacatcatctgttgcttcgggtactaatttggttctttatgctgcccc +gttaaaccctctgctgccccttcaggatggcactaacactcacatcatggccactgaggcatctaattatgc +ccagtatcgggttgtccgagctacgatccgctacaggccattggtgccaaatgctgtcggcggctatgcaat +atctatttcattctggcctcagactactactactcccacgtctgttgatatgaactctattacttccactga +tgttaggattttagttcagcctggcattgcttctgagttggtcattcctagtgagcgcctccattatcgtaa +ccagggctggcgctctgtggagacctcgggtgtggctgaagaggaggctacttctggcttggtaatgctttg +tattcatggctcccctgttaattcctacaccaataccccttacaccggggcgcttggactccttgattttgc +tttagagcttgagtttaggaacctgacacccgggaacactaacacccgtgtatcccggtatacaagcacagc +ccgtcatcggctgcgccgcggtgctgatggcaccgccgaactcaccaccacagcggccacgcgctttatgaa +ggacctgcatttta---ccggtacgaat---ggggtcggtgaggtgggtcgtggcattgctctcacactttt +taatcttgctgacacgcttctcggtggtctgccgacagaattaatttcgtcggctgggggacagttattcta +ctcccgccccgtcgtctcagccaatggcgagccgactgtcaagttatatacatctgtagagaatgcgcagca +ggataaagggatcgctatcccacatgacatagatctgggtgactcccgtgtggtcatccaagattatgacaa +ccagcatgagcaggatcgacccaccccctcgcctgccccttctcgccctttttcggttcttcgcgctaatga +tgttctatggctttc-----------------------------tcttactgctgccgagtacgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctcagatactgtcacatttgt---caatgtggct +acaggagcccaggctgtcgcccgctccctcgactggtctaaagttactctggacggccgccctcttactact +at-----ccagcagtactctaaaacattttatgttc-tcccgctccgcgggaagttatctttttgggaggcc +gggacgactaag--gccggctacccctataattacaacacaactgctagtgatcagattttgattgagaatg +cggctggtcat------cgtgtcgccat-ttccacgtataccaccagcttggg--------------cgctg +gccctgtgtctgtttc-tgcagttggtgttttagccccacattcggctcttgcagtccttgaagacactact +gact---------accctgcccgtg----cccacacttttgatgatttttgcccggagtgtcgcgctc---t +tggtttgcaggggtgtgccttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattaa-tt----t--cctt---t------gt +gccc-cct--------tc-atag-ctttg----ct-tt---a----------------tttc-t-------- +tttcttct----gc----------------gtttcgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaa----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH504140.1/17241/1-7241 |Hepeviridae isolate HEV_24_Nottingham_UK_181214, complete genome +----------------------------gcagacca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccaccagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggctaactccgccttggcgaatgctgtggtggtccggccgtttctgtctcgtactcagactgacatcct +tatcaatttgatgcaaccccggcaacttgtattccgccctgaagtcttgtggaaccatccgatccagcgagt +tatacataatgagctggagcagta---ttgccgtgccc-gcgccggccgctgcctggaggtcggggctcatc +caagatccattaatgacaaccctaatgttctgcatcggtgttttctccgcccggttggaagagatgtacagc +gttggtattccgccccgactcgtggcccagcggctaattgccgtcgctccgcgttgcgtggcctaccccctg +tcgaccgtacctactgtttcgacgggttctcccgctgctcctttgccgctgagactggaatcgccttatatt +cattacatgacctctggcccgccgatgtcgcggaggctatggcccgccatgggatgacgcgtctgtatgcag +ccctccaccta-ccccctgaggttttgttaccacctggtacttaccataccacctcttacttgctaatccac +gacggcgatcgcgccgtcgtgacttatgagggggataccagtgcgggctataaccatgatgtgtccattctc +cgtgcatggattcgcacgaccaagattgttggtgatcacccactggttatagagagggtccgcgccattggc +tgccattttgtactactccttactgctgctcccgaaccatctcctatgccttatgtcccgtaccctcgctcg +acagaggtgtatgttaggtctatattcggccccggt---------gggtcgccatccttgtttccatcagcc +t----------gctctactaaatcta-catttcacgctgttccggtccatatctgggaccggctcatgcttt +tcggcgccactctggacgaccaggccttctgttgctcgcggcttatgacctacctccgagggattagctata +aggtgaccgttggtgcactcgtcgccaacgaaggctggaacgcttcagaggatgcgctcaccgccgtgatca +ctgcagcatatctgactatctgccaccagcgctacctccgaactcaggctatatctaaaggcatgcgtcggt +tggaagtcgagcacgcccagaagtttattactaggctttacagctggttgtttgagaagtc---------cg +gtcgtgattatatccccggccgtcaacttcagttctatgcgcagtgccgccgttggctctctgccggcttcc +atttagaccctagagttcttgtctttgatgaggcggtcccctgc---cgctgtcggagctttctgaagaa-- +----ggttgctggtaagttttgctgttttatgaagtggctagggcagga------gtgtacctgttttctag +----------------agccggccgagggcttagtcggtgactgcggc--------catgataacgaggcct +acgagggttctgaagtagatcctgctgagcctgcctaccttgatgtctctgggacctacgcagttcacggcc +gccagcttgaggccctatatagggcgctcaatatcccacaagacattgcggctcgtgcatcacgcttgacgg +ccaccgtagagcttactgctggcccgggccgccttgaatgccgtacagtgcttgggaataagacctttcgca +catcaataaccgatggtgcccacctcgaggctaatggccc------------------------tgagcagt +atgttttaacatttgatgattcccgccaggcgatgggggctgggcctcatagtctcacatatgagctcaccc +ccgccggcctgcaggttagtatatcttct-------aatggtcttgactgcaccgctgtttttccc---ccc +ggtggggcgccgagcgccgaaccgggtgaggtcgcggctttctgcagtgcattatacagatacaatagattc +actcagcgccactcgctgaccggcgggttgtggctgcaccctgaggggcttctgggtctgtttccccctttc +tcccctggacacctctgggagtctgcaaatcctttttgtggtgagggcacactttatactcgaacctggtca +acatctggcttttctagtgatttttccccccctgaggcggctttcgccgccccagcacccggtgg----ggg +gcagcccccaggaacccccccttctgttagcgacgt-----------------ttgggtgct---------- +---------cccgccgccc----tctgagggat--------------cagtggctgctgcaccgcctgcagc +cccggt------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------------------------tagtaagcctactagcctgcccagt +cctgtcacacctaag-------------------------------------ccccccgctcgtaagtcgcc +accaccgct--------------------------------------gccggcccgtacccgccggc----- +-------------------ttctctacacttatccagatggggccaaggtctatgcaggttccctatttgag +tcagactgtgattggctggtcaatgcgtccaaccctggtcaccgtcctggcggtggcctctgtcatgccttt +tatcagcgcttcccagagtcgt------tttatccgaccgatttcatcatgcgcgaggg---cctagccgct +tataccttgaccccacgcccgatcattcatgctgtagctcctgactatagagttgagcagaatcccaagagg +ttagaggcggcgtaccgcgagacctgctcccgcctcggcacagccgcctacccactactggggtcggggata +tatcaagtccccgtgggtttaagttttgacgcctgggagcgcaaccatcgcccaggcgatgagctctatctc +actgagcccgctgctgcg-------------------------------------------------tggtt +tgaggctaataagccgactca--------------------------------------------------- +------------------------------------------accagccctaacgattactgaagatactgc +cc------------gcacggctaacctcgcgcttgagatcg------------attccgccaccgaggtggg +ccgtgcttgt---accggctgtactgtcagccctgggattgttcattaccagtttactgccggggtgcctgg +ctccgggaagtctaggtctatacaacaaggggacgtcgatgttgtggttgtgccaactcgcgagctccgtaa +tagctggcgacgtcgtggttttgctgcttttacaccccatacggcagcccgcgtcactgctggtcgacgtgt +tgtgattgatgaggcaccttcacttccaccgcatctgctgctgcttcatatgcagagggcttcgtcggttca +ccttctcggcgaccccaaccagattcccgctattgattttgagcatgcgggcctggttccagcgattcgccc +cgagcttgccccgactagttggtggcacgttacacaccgctgccctgctgacgtgtgtgaacttatacgcgg +ggcttatcctaaaatccagaccactagccgcgtgatgcgatctctgttttggaatgag------cccgcggt +gggccagaaactggtcttcacgcaggcagctaaagcggccaaccccggcgcaattactgtccatgaggccca +gggtgctacattcacagagactaccattatagccacggccgatgctaggggccttattcagtcttctcgtgc +gcatgcaattgtcgcactcacccgccacacagaaaagtgtgtaattttggacgctcccggcctattgcgcga +ggtcggcatctctgatataattgtcaacaatttc------------------------------tttctggc +tggcg--gagaagtaggccaccaccgcccctctaccataccccgtggtaacccggaccggaatttagacat- +-----tttgcaggcattccctccatcttgtcaaattagtgcctatcatcagttagctgaagagctgggccat +cggccggccccagtggctgctgtactaccaccctgccctgagcttgagcagggcttactttatatgccacaa +gagctcacagtgtccgatagtgttttggtctttgagctcacggacatagtccactgccgaatggcagcccct +agtcaacggaaggccgtcctctcaacgctcgttggcaggtatggccgtcggacgcggctgtacgaggcggcc +cactctgatgtccgcgagtctctggggaggttcatccctaccatcggaccagttcaggccaccacatgtgag +ttgtatgagttagtagaggctatggtcgagaagggccaggatggttccgctgtactagagcttgatctttgt +agccgagatgtctcgcgtattacattcttccagaaggactgtaacaagttcacaacaggtgagaccatcgcc +catggtaaggtgggccagggcatctcggcctggagcaaaaccttctgcgctctatttgggccgtggttccgt +gccattgagaaggaaatcctggccctgctcccacctaatatcttttatggtgatgcttttgaagagtcagtg +ttctctgcagccatctctggagcgggttctagcatg---gtttttgagaatgatttctctgagtttgacagc +acccaaaacaacttctccct------------------cggcctcgagtgtgtaattatggaagagtgtggt +atgcctcaatggctcatccggctgtaccatctggttaggtcggcctggactttgcaggccccgaaagagtcc +ctgaaaggtttttggaagaagcactccggcgagcctggtacacttctctggaacacggtttggaatatggcg +atcatagcgcattgctacgagtttcgtgacctgagagtggcagcgttcaaaggggatgattcagtggttctt +tgtagtgactatcgccagagccgtaatgcggccgccttgatcgctggctgcgggctaaagctgaaggttgat +taccgccccatagggttgtacgccggtgtcgtggtagccccgggtcttggggcactcccagacgtcgtccgg +ttcgccggccggctgtctgagaagaattggggcccgggtcccgagcgcgctgagcagttgcgcctggcagtt +tgtgatttccttcgaaggctaacgaatgttgcgcaggtctgtgttgatgttgtgtcccgtg-------ttta +cgaggttagtcctgggttggtacataaccttattggcatgctacaaactatagctgatgggaaggctcattt +tactgagactatcaagcctgtattggatcttacaaattctatcatacagaggttagaatgaataacatgtt- +g----------------tgtgcatcgcccatggg------------gtcaccatgcgccctcgggctgtttt +gctgttgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagtcgtctggcc------------gccgtcgtgggcg-gcgcagcggcagtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgccgacgtcgtatcacaatccggggctggagctcgccctc +gacagccgccccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgcctcccgtcgtcgatctacccca---------gctggggctgcgccgttaac +tgctgtctcccctgcgcctgatacggctccagtccccgacgtagattctcgcggtgctattttgcgtcgcca +gtataatttgtctacttcccctctaacttcctctgttgcttctggcaccaatcttgttctgtatgctgctcc +acttaatcctctcctacctctccaggacggtaccaatactcacatcatggcgactgaggcgtctaattacgc +ccagtatcgggttgttagggctacaatccgataccgccctttggtgccgaatgctgttggcggctacgcaat +ctctatatctttttggccccagaccacaactacacccacctctgttgatatgaattccattacttctactga +tgttaggattctggttcagcccggtgtggcctctgagttggtcatccctagtgagcgcctccattaccgtaa +tcagggttggcgctctgttgagacctcgggcgtggccgaggaggaggcaacatcgggcttggttatgctctg +tattcatggttcccctgttaattcctataccaatacgccctatactggggcattgggactccttgattttgc +acttgagcttgaatttaggaacttgacccccgggaacactaacacccgtgtgtcccgatacactagcacggc +ccgtcatcgtctacgccgcggtgctgatgggactgccgagctcacaaccactgcggccacccgctttatgaa +ggacctgcatttca---ccgggacgaat---ggcgttggtgaggtgggccgtggcatagccctaactttatt +taaccttgctgatacacttctcggcggtctgccgacagaattgatttcgtcggccggaggccagcttttcta +ctctcgtccagttgtctcggccaatggcgagccagctgttaaattatacacctccgtcgagaatgcacagca +ggataagggtattgccataccacatgatatagatctaggagattcccgtgtggttatccaggattacgacaa +tcagcatgagcaggataggcccaccccttcgccggccccgtcccgtcctttttcagtcctccgtgctaatga +tgttttgtggctatc-----------------------------tctcactgccgctgagtatgac------ +caaaccacttatggctcgtcgactaatcctatgtatgtttcagatactgttacttttgt---caatgtggct +acgggggcccaggctgttgcacgctcccttgactggtctaaggtcaccttggacggtcgacctctcaccact +at-----tcagcagtactctaagacattttatgttc-tcccgcttcgcggtaagctttctttttgggaggcc +ggcactactaag--gccgggtatccttataactacaacaccactgctagcgatcagattttgatagagaacg +cagctggccac------cgtgttgctat-atccacctatactactagtcttgg--------------tgctg +gcccagtgtctgtctc-tgccgttggtgttcttgccccccactctgctttagctgtgcttgaagatactatt +gatt---------accccgcccgcg----cccatacttttgatgatttctgccctgagtgccgtaacc---t +tggccttcagggctgtgctttccaatc--------tactgttgctgaacttcagcgcct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-ttt---cc-cttt----------gt +gccc-cct--------tc-tagg-tt-ct----gc-tt-ta-------------------tt-t-------c +ttttttct----gcg----------------ttccgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaa---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH504141.1/17222/1-7222 |Hepeviridae isolate HEV_23_Portsmouth_UK_171214, complete genome +-----------------------------------a-cgcatg-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttgtcccgtattcagactgagattct +tatcaacttgatgcaaccccgacagcttgtgttccgccctgaggttttgtggaatcacccgatccagcgtgt +catacacaatgaacttgagcagta---ctgtcgtgccc-gcgcaggtcgctgtttggaggttggggcccacc +ctagatccattaatgataaccccaatgtcttgcaccggtgtttcctccgcccggttgggagagatgtgcagc +gttggtactctgcaccgactcgcggtccagcggctaactgccgccgctccgcattacgtggtttgccccctg +tcgatcgtacctactgcttcgatgggttctcccgctgtgcctttgccgctgagactggaattgccttgtatt +cactacatgacctctggcctgcagacgttgcggaggccatggctcgccacgggatgacacgcctgtacgcag +cccttcacttg-ccccctgaggtcctgctaccacctggaacctatcataccacctcttatctattgatccac +gacggcgaccgcgccgtcgtaacttatgagggggatactagcgcaggttataaccatgatgtgtccattctc +cgtgcatggattcgtacaaccaagatagttggtgaccacccgctggttatagagagggtccgtgccattggc +tgccattttgtgctactcctcactgcagcccctgaaccatctcccatgccttatgtcccataccctcgttca +acagaggtgtatgttaggtctatatttggtcccggc---------gggtcaccctccctctttccgtcagcc +t----------gctctactaaatcta-cattccatgctgtcccagtccacatctgggaccggctcatgcttt +tcggcgccactttggacgaccaagccttttgttgctcgcggcttatgacctatctccgcgggatcagttata +aggtgaccgttggtgcactcgtcgccaacgagggctggaacgcctcggaggatgcgctcactgcggtgatta +ctgcagcatacttgaccatctgtcatcagcgctacctccggactcaagctatatctaaaggtatgcgtcgtc +tagaggttgaacatgcccagaagtttataactaggctctatagctggttatttgagaagtc---------cg +gccgtgactatatccccggccgccagctccaattttatgcgcagtgccgccgctggctctcagccggcttcc +atctagaccctagagtccttgtttttgatgaggcggtcccctgt---cgctgtaggagtttcttaaagaa-- +----ggttgctggcaagttctgctgttttatgaagtggctggggcaaga------gtgcacttgcttcctgg +----------------agccggctgagggcttggttggtgactgcggt--------catgataatgaggctt +atgagggttcagaggtagatcctgccgagcccgtccatcttgatgtctccgggacctacgcagtccatggcc +gtcagcttgaagctttatacagggcgctcaatatcccacatgacattgcggctcgtgcgtcacgcttgacgg +ccactgtagagctcaccgctgctccgggccgccttgaatgccgtacggtgctcggaaataagaccttccgta +catcaataactgacggcgcccacctcgaggttaatggccc------------------------tgagcagt +atgttttaacatttgatgacacccgccaagcgatgggggctgggcctcatagtctcacatatgagctcactc +ctgctggcctgcaggttaggatatcttct-------aacggcctagactgtactgctgtttttccc---cct +ggtggggcacctagtgccgaacctggtgaggttgcagccttctgtagtgccttatatagatacaatagattc +acccaacgtcactctctaaccggcgggttgtggctgcaccctgaggggcttttgggcctgttccctcctttt +tctcccgggcatatctgggagtctgctaatcctttttgtggtgagggtacgctttacacccggacttggtct +acatctggtttttctagcgatttttcccctcccgaagcggcttttgctgccccagctcctgatgg----ggg +gttgcctttgggtaccccctcttctgttagtgatgt-----------------ttgggtgct---------- +---------cccgccaccc----tcagaggggt--------------cagtggttgctccgccgcctgcagc +cccggt------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------------------------tagtaagcctactagcctgcccagc +cccgccatacctaaa-------------------------------------ccccccgctcgtaagccgcc +ctcaccgcc--------------------------------------accggcccgtacccgccggc----- +-------------------ttctctacacctacccggatggagctaaggtttatgctggctctctgtttgag +tcagattgtgattggctggttaacgcgtccaaccccggccatcgccctggtggcggcctttgtcatgctttt +taccaacgtttcccggagtcat------tctacccgactgattttatcatgcgcgaggg---cctcgccgcg +tatactctgaccccacgcccgatcattcacgctgtggctcctgattatagggttgagcagaaccccaagagg +cttgaggctgcgtaccgtgagacctgctcccgcctcggcacagccgcttacccactattgggttctgggatc +tatcaggtccctgtgggtttaagttttgacgcctgggagcgtaaccatcgcccaggcgacgagctctacctc +accgagcccgctgctgcg-------------------------------------------------tggtt +tgaggccaacaaaccagccca--------------------------------------------------- +------------------------------------------accagccctaacaatttctgaagacaccgc +cc------------gcacggctaacctcgcgcttcagatcg------------actctgccaccgaggtagg +tcgtgcctgt---accggctgcactgttagccctgggattgtccattatcaatttactgccggcgtgcccgg +ttccgggaagtctaggtctatacagcagggggatgttgatgttgtggttgtgccgacccgtgagctccgcaa +cagttggcgacgccggggttttgctgcttttacacctcacactgcagcccgcgtcaccgctggtcgacgtgt +tgtgattgacgaggcaccctctctcccaccacatttgctgctgcttcatatgcagcgggcttcgtcggtcca +tctccttggcgaccccaaccagattcctgccatcgattttgagcatgcgggcctggtgccggcgattcgccc +tgagctcgccccaactagttggtggcacgttacacaccgctgccccgccgacgtgtgtgagcttatacgtgg +ggcttaccccaagatccaaaccactagccgtgtgacgcggtctctgttctggaatgag------cctgcggt +tggccagaagctggtctttacgcaggcagctaaggcggctaatcccggtgcaattactgtccatgaggccca +gggcgcaacattcaccgagactactattatagccacggccgatgctaggggccttatccagtcctctcgtgc +gcacgcaatagttgcacttactcgccacacagagaaatgtgttattctggacgcccccggcctactgcgtga +ggtcggtatttctgatataattgttaataacttc------------------------------tttcttgc +tggtg--gtgaagtgggtcaccatcgcccctctaccataccccggggcaatccagaccggaacctagatac- +-----cttgcaggcattccctccatcttgtcagattagtgcttaccaccagctagctgaggagttgggccac +cggccggctccggtggctgcagtactaccgccctgccctgagctcgagcaaggtttactctatatgccgcaa +gaacttacggtgtccgatagtgttttggttttcgagctcacggacatagtccactgccgaatggcggcccct +agtcaacgaaaggccgtcctttcaacactcgttggcagatacggccgtcgaacgaagctgtacgaggcagcc +cactctgacgttcgtgagtctttagggaggtttatccctaccatcggaccagttcaggccactacatgtgag +ttgtatgagttagttgaggctatggttgagaagggccaggatggttctgctgtgctagagcttgatctctgt +agtcgcgatgtttcgcgtattacgttcttccagaaagactgtaataagtttacaacaggtgagaccattgcc +catggtaaggtaggccagggtatttcggcttggagcaaaaccttctgtgctctatttggaccgtggttccgc +gccattgagaaggagatcttagccctgctcccacctaatattttctatggtgatgcttttgaagagtcagtg +ttctctgcagccattgctggagcgggttccagtatg---gtttttgagaatgatttctctgagtttgacagt +acccaaaacaatttctccct------------------cggtcttgagtgtgtcattatggaagagtgtggc +atgccccagtggcttatccggctgtaccatttagtcaggtcagtctggactttacaggccccgaaagagtcc +ttgaaaggcttttggaagaaacactctggcgaacctggtacactgctatggaacactgtgtggaatatggcg +attatagcgcactgctacgaattccgtgacctgagagtggcagcgttcaaaggggatgactcagtggtcctt +tgcagtgactaccgccagagccgtaatgcggctgccttaattgctggttgtgggctaaaattgaaggttgat +taccgccccatagggctgtatgccggcgtcgtggtggccccgggtctcggggcactccctgacgtcgtccgg +ttcgccggccggctgtctgaaaagaattggggcccaggccccgaacgtgctgagcagttacgtctagcagtt +tgtgatttccttcgagggttgacgaatgttgcgcaggtctgtgttgatgttgtttcccgtg-------ttta +cggggttagtcctgggttggtacataaccttattggcatgctacagactatagccgatgggaaagctcattt +tactgagactatcaaacctgttctggaccttacaaattctatcatacagaggttggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgtgccctcgggctgttct +gttgttgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccga------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcagtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaatccggggctggagctcgctctc +gacagccgccccg---------------ccccctcggttcctcttggcgtgaccagtccca----------- +------gcgcccccccgcccccccccgtcgtcgatctacccca---------gctggggctgcgccgttaac +tgctgtgtctcccgcgcccgacacggccccagtccccgatgttgattcccgcggtgctattttgcgccgcca +gtataatttgtctacctctcctttgacctcctctgtcgcttccggcactaatcttgtcttatatgctgcccc +gctcaaccccctcctccccctccaggatggtaccaacactcacatcatggctactgaggcgtctaactacgc +ccagtatcgggttgtccgtgctaccatccgctaccgccctttggtgccgaatgctgttggcggctatgcaat +ttctatctccttttggccccagactacaactactcccacctctgttgacatgaattccattacttctactga +tgttaggattctagtccaacctggcatagcctctgagttggttattccaagcgagcgcctacactatcgtaa +tcagggctggcgctccgttgagacctcgggtgttgccgaggaggaggcaacatcgggcctggttatgctttg +cattcatggttcccccgttaattcttataccaacacgccctacactggggcgttggggcttcttgactttgc +actagagcttgaatttaggaacttgacccctgggaacactaacacccgtgtgtcccggtatactagcacggc +tcgtcaccgcctacgccgcggcgctgatgggactgccgaacttacgaccactgcagccacgcgctttatgaa +ggacttgcatttca---ctgggactaat---ggcgttggcgaggtgggccgtggtatagccctaactttgtt +caatctcgctgatacacttctcggcggtctgccgacagaattgatttcgtcggccggaggtcaactcttcta +ctcccgcccggttgtctcggccaatggcgagccaactgtcaaattatacacctccgtcgagaatgcacagca +ggataagggcattgccataccacatgacatagaccttggcgattctcgtgtggttatccaggattacgataa +ccagcatgagcaggataggcccaccccttcgccggccccgtctcgccccttctcggtcctccgcgccaatga +tgttctgtggctttc-----------------------------tcttactgctgctgagtatgat------ +cagaccacttacggctcatctaccaaccctatgtatgtttcagatactgtcacctttgt---caatgttgct +acgggagcccaggctgtcgctcgctcccttgattggtctaaggttacccttgatggtcgacctctcactacc +at-----ccagcagtactctaagacattctatgtcc-tcccactacgtgggaagctttctttttgggaggcc +ggcactaccaag--gccgggtacccttataattataacaccactgctagtgatcagattttgatagagaatg +cagccggtcac------cgtgttgctat-atctacctatactactagtcttgg--------------cgctg +gcccagtgtctgtttc-cgcggtcggtgttcttgctccccactctgctttagctgtgcttgaagatactatc +gatt---------accctgctcgtg----cccacacttttgatgatttttgtcccgagtgccgtaatc---t +tggcttacaaggctgtgctttccaatc--------tactattgctgaacttcagcgcct------------- +--------taaaacgaaggtaggtaaaacccgggagtcctaattaa-ttt---ca-tcct----------gt +accc-cct--------tc-tagg-tt-tt----gt-tt-ta-------------------tt-t-------c +tttcttct----gcg----------------ttccgcgctccctg---------------------gaaaa- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH504145.1/17241/1-7241 |Hepeviridae isolate HEV_19_Surrey_UK_180814, complete genome +----------------------------gcagacca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggctaactccgccttggcgaatgctgtggtggtcaggccgttcttgtcccgtattcagactgaaatcct +cattaatctgatgcaaccccggcagctcgtattccgtcctgaggtcttgtggaaccacccgatccaacgggt +tatacacaatgaactggagcagta---ctgccgtgctc-gtgccggacgctgcctggaagtgggtgctcacc +caagatctattaatgacaaccccaatgtcctgcaccggtgctttcttcgcccggtcgggagagatgtgcagc +gttggtactccgctccgacccgcggccctgcggctaattgccgccgctccgcactacgtggcctaccccctg +tcgaccgcacttactgcttcgacgggttttcgcgctgcgccttcgccgctgaaactggaattgctttatact +ctctacatgacctttggcctgcggatgttgcggaggccatggcccgccatgggatgacacgcttgtatgcag +ccctccattta-ccccctgaggttttgctaccgcctggtacttaccataccacctcttatttgttgattcac +gatggcgaccgcgctgtcgtaacctacgagggggacaccagtgccggctataaccatgacgtgtccattctc +cgcgcatggatccgcacaactaagatagtcggtgaacacccgctggttatagagagggtccgtgccattggt +tgccattttgtgctgctcctcacagctgctcctgaaccatctcctatgccttacgtcccgtaccctcgctca +acagaggtgtatgttaggtctatatttggccctggc---------gggtcaccttctctcttcccatcagcc +t----------gctccaccaaatcca-cgttccatgccgttccggtccatatttgggaccggctcatgcttt +tcggcgccaccttagacgatcaagccttttgctgctcgcggcttatgacctatctccgcgggatcagttata +aggtgaccgtcggggcactcgtcgccaacgaaggatggaacgcctcagaggatgcgctcactgctgtgatca +ccgcagcgtatctgaccatctgccaccagcgctacctccgaacccaggctatatctaagggcatgcgtcggc +tagaggtcgagcacgcccagaagtttattactagactttatagttggctgtttgaaaagtc---------cg +gccgagactacatccccggccgtcaacttcagttttatgcacagtgtcgtcgttggctctctgccggcttcc +atttagaccccagggtccttgtttttgatgaggcggtcccttgc---cgctgtaggagcttcctgaagaa-- +----ggttgccggtaagttctgctgctttatgaagtggttagggcagga------gtgcacctgtttcctgg +----------------agccggctgagggcttgatcggtgactgcggc--------cacgacaatgaggcct +atgagggctctgaggtagattcagccgagcctgcccatcttgatgtctctgggacctacgcagttcatggcc +gccagcttgaggccctatatagggcgctcaacattccacacgacattgcggcccgtgcatcacgcttgacag +ccaccgtagagctcgctgctagcccaggccgtctagaatgccgcacggtgcttggaaataagacctttcgca +cctcaataactgatggtgcccaccttgaggtcaatggccc------------------------cgagcagt +atgttttgacatttgatgactcccgtcaagcgatgggggctgggcctcatagtcttacatatgaactcaccc +ctgctggcttgcaggttagaatatcttct-------aatggtctagactgcactgctgtcttcccc---ccc +ggtggggcgccaagtgccccaccgggtgaggttgcaggtttttgtagcgctctatataggtacaacaggttt +actcagcgacattcgctaaccggcggattgtggttacaccctgaggggctgttaggtctattcccccctttc +tcccctgggcatctctgggagtctgcaaaccccttttgtggtgagggcacactttacactcggacttggtcc +acatctggtttttcgagtgacttttctccccctgaggcggcttttgccgccccagccccagacgg----agg +gctgcccccgggcaccccctcttctgtcagtgatgt-----------------ctgggtact---------- +---------tccgccgccc----tctgaggggt--------------cagtggttgctccgccgcctgcagc +cccggt------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------------------------tagtaagcctactggcccgcctagc +cctgccatatctaaa-------------------------------------ccccccgttcgcaagccatc +ttcaccacc--------------------------------------accggctcgtacccgccggc----- +-------------------ttctctatacttatccagatggggctaaggtctatgcaggctccctgtttgag +tcagactgtgactggttggtcaatgcatctaatcccggccaccgtcctggtggtggtctctgtcacgccttt +tatcagcgctttccagagtcgt------tctatccgactgatttcattatgcgcgaggg---ccttgccgcc +tacaccttgaccccacgcccgatcatccatgctgtggcccctgattatagggttgagcagaaccccaagagg +ctagaggcggcgtaccgtgagacctgttctcgcctcggtacagccgcttatccactgctggggtctgggatt +tatcaagtccctgtgggcttaagttttgatgcctgggagcgtaaccatcgcccaggcgatgagctttacctc +accgagcccgctgcagcg-------------------------------------------------tggtt +tgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------accagccttaactattactgaggacactgc +tc------------gcacggctaatctcgcgcttgaaattg------------actctgccaccgaggtggg +ccgtgcctgc---actggctgtactgttagccctgggattgttcattatcagtttactgccggggtgcctgg +ctccgggaagtctagatctatacaacaaggggacgtcgatgttgtggttgtgccaacccgcgagctccgcaa +tagctggcggcgccgtggctttgctgcatttacaccccacacggcggcccgcgtcacagcccgccggcgtgt +tgtgattgacgaagcgccctctcttccgccacatttgctattgctccatatgcagcgagcttcgtcggtcca +ccttctcggcgaccccaaccagattcctgctattgattttgagcatgcaggcctggtcccggcgattcgccc +cgagcttgccccaactagttggtggcatgttacacaccgttgccctgccgacgtgtgcgagctcatacgtgg +ggcctaccccaagattcaaactaccagccgtgtgatgagatctttgttttggaatgaa------cctgcagt +aggccagaagttggttttcacgcaggcagctaaagcagccaatcctggcgcaattactgttcatgaggccca +gggtgctacttttactgagactaccattatagctacggcagatgccaggggccttattcagtcttctcgtgc +acatgcaattgtcgcacttacccgtcatactgaaaaatgtgtcattttggatgcccctggcctgctgcgtga +ggttggtatctctgatataattgttaataatttc------------------------------tttctggc +cggcg--gtgaggttggccaccaccgtccctccaccataccccggggcaatccagaccagaatttagatac- +-----cttgcaggcattccctccatcttgccaaattagcgcttaccaccagctagctgaggagctaggccac +cgaccagccccagtggctgctgtactaccgccctgccccgaacttgagcagggcctactctatatgccacaa +gagctcacagtgtccgatagtgttctggtttttgagctcacggacatagttcactgtcgaatggcggcccct +agtcagcggaaggccgtcctttcaacacttgtcggcaggtacggccgccgaacgaagctgtatgaggcggcg +cattccgacgtccgtgagtcattagcaaggtttatccccactatcggaccagttcaagccaccacatgtgag +ttatatgagttagtagaagccatggttgagaagggccaggacggttctgctgtgctagagcttgatctctgt +agccgtgacgtctcccgtattacatttttccagaaggactgtaataaatttacaacgggcgagactgttgcc +cacggtaaagtgggtcagggtatctcggcgtggagtaagaccttttgtgctctatttggaccgtggttccgt +gccatcgagaaggagatcctggccctgctcccgcctaatattttctatggtgatgcttttgaagagtcagtg +ttctctgcggccatcgctggagcaggttctagtatg---gtttttgagaacgatttctctgagtttgacagt +acccaaaataatttttctct------------------cggcctcgagtgtgttattatggaagagtgtggc +atgcctcagtggcttattcggttgtaccatttggttaggtcagcctggactttgcaggccccgaaggagtcc +ctgaaaggtttttggaagaagcactctggtgagcctggtacactcctctggaacactgtctggaacatggcg +atcatagcgcactgctatgaatttcgagacctgagcgtggcagcgttcaaaggagatgattcagtggttcta +tgcagtgattaccgccagagccgtaatgcagccgccctgattgctggttgtgggttaaaactgaaggttgat +taccgccccattgggttgtacgctggaattgtggtggccccgggtctcggggcactccctgatgttgtccgg +ttcgccggccggctgtctgagaagaattggggccctggccccgagcgagccgaacagttgcgtttggcagta +tgtgatttcctccgaaggctgacgaatgttgcgcaggtctgtgttgatgttgtgtcccgtg-------ttta +tgaggttagtcctgggctggtacataaccttattggcatgctacagactattgccgatgggaagggtcattt +tactgaaactgttaaacctgtacttgatctcacaaactctattacacagaggttggaatgaataacatgtt- +g----------------tgtgcatcgcccatggg------------atcgccatgcgccctcgggctgttct +gttgctgttcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgctgacgtcgtatcacaatccggggctggagctcgccctc +ggcagccgccccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------gctggggctgcgccgctgac +tgccgtctcccctgcacctgatacggctccggtccctgacgttgactctcgtggtgctattctgcgccgcca +gtacaacctatctacttctcctctgacctcttctgttgcttctggtactaaccttgtcctgtatgctgcccc +gcttaatcctctcttacctctccaagatggcactaacactcacatcatggcgactgaggcgtctaactacgc +ccagtatcgggttgtccgggctacaatccgctatcgccctctggtgccgaatgctgttggcggctatgcaat +ttctatttccttctggcctcagaccacaaccacccctacctctgttgatatgaattccatcacgtctactga +tgttaggatcttagttcagcctggcatagcctctgagttggttatcccgagtgagcgcctccattatcgcaa +ccagggttggcgctctgttgagacctcgggtgtggccgaggaggaggcgacttcaggtttggttatgctctg +cattcatggctctcctgtaaactcttataccaacacgccctacactggagcattgggccttcttgactttgc +acttgagcttgagtttagaaatttgactcctgggaacactaacacccgtgtctcccggtacactagcacggc +tcgtcaccgcttacgccgtggcgctgatggaactgctgagctcacgaccactgcggctacgcgttttatgaa +ggacctgcacttca---ctgggacgaat---ggcgtcggtgaggtgggccgtggcatagccctaactctatt +caaccttgctgacacacttctcggcggcttgccgacagaattgatttcgtcggccggaggtcagctctttta +ctcccgcccagttgtctcagccaatggcgagccggctgttaaattgtacacttccgtcgagaatgcacagca +ggataagggtattgccataccccatgatatagatctcggggattcccgcgtggttattcaggattatgacaa +ccagcatgagcaggacaggcccaccccttcgccggccccgtctcgccccttttcagtccttcgtgctaatga +cgttctgtggctttc-----------------------------tctcactgctgctgagtatgac------ +caaaccacctatggttcgtcgaccaatcctatgtatgtttcagacactgtgacttttgt---caatgtggct +acgggagcccaggcagtcgcccgctccctagactggtctaaggtcaccctggacggtcgaccccttaccact +at-----ccagcagtattctaagacattctatgtgc-tcccactccgtgggaagctctcattctgggaggct +ggcactactaag--gccgggtatccctataattataacactactgctagtgatcagattctaatagagaatg +cagccggccac------cgcgttgctat-atccacctatactactagccttgg--------------agccg +gcccagtgtctgtttc-tgcagtcggcgttcttgccccccattctgctctagctgtgcttgaggatactatt +gatt---------accctgcccgcg----cccacacttttgatgatttttgccctgagtgccgtaatc---t +tggcctacagggctgtgctttccaatc--------tactattgctgaacttcagcgcct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattca-ttt---ca-cctt----------gt +gccc-cct--------tc-tatg-tt-tt----gt-tt-ta-------------------tt-t-------c +ttttttct----gcg----------------tttcgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaa---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH504146.1/17241/1-7241 |Hepeviridae isolate HEV_18_Chichester_UK_300914, complete genome +----------------------------gcagacca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggctaactccgccttggcgaatgctgtggtggtccggccgttcttgtcccgcactcagactgacatcct +tattaatctgatgcaaccccggcagctcgtattccgccctgaggttttgtggaatcatccgatccagcgagt +catacataacgaactggagcaata---ctgccgtgctc-gcgccggtcgctgtctggaagtgggggcccatc +caagatctattaatgacaaccctaatgttttgcaccggtgtttcctccgtccggtcgggagggatgtgcagc +gttggtactccgccccgacccgcggcccagcggctaactgccgccgttctgcactacgcggcctaccccctg +tcgaccgtacctactgtttcgacgggttctcccgctgcgccttcgctgctgagactggaattgccttatact +cactacatgacctttggcctgctgacgttgcagaagccatggcccgccacgggatgacacgcttgtatgcag +cccttcaccta-ccccctgaggtcttgttaccacctggtacttatcataccacctcttatttgttgattcac +gacggtgatcgcgctgtcgtgacttacgagggggacaccagtgcaggctataaccatgatgtgtccattctc +cgtgcatggattcgcacaactaagatagtcggtgatcacccgctggtcatagagagggtccgtgctatcggc +tgccattttgtgctgctccttactgccgcccctgaaccatctcccatgccttatgtcccataccctcgctca +acagaggtgtatgttaggtctatatttggccccggc---------gggtcgccttctctcttcccatcagcc +t----------gctccaccaaatcta-catttcatgcggtcccggtccatatttgggaccggctcatgctct +tcggcgccaccttagacgaccaagccttctgttgctcgcggctcatgacttatctccgcgggatcagttata +aggtgaccgtcggtgcacttgtcgccaatgaaggctggaatgcctcggaggatgcgctcactgctgtgatca +ctgcagcgtatttgactatctgccatcaacgctacctccggactcaggccatatctaagggcatgcgccggc +tagaggtcgagcatgcccagaagtttattactaggctttatagttggttgtttgagaagtc---------cg +gccgtgattatatccccggccgccaactccagttttatgcacagtgccgccgctggctctccgccggctttc +acttggaccctagggtcctcgtttttgatgaggcggttccctgc---cgttgtaggagctttttgaagaa-- +----agtcgccggtaagttctgttgctttatgaagtggttagggcagga------gtgcacttgctttctgg +----------------agccggctgagggcctggttggtgactgtggc--------catgataacgaggcct +atgagggctccgaggtagatcctgccgagcctgtccatcctgatgtctctgggacctatgcagtttatggtc +gccagcttgaggctctatatcgtgcgctcaatatcccgcacgatatcgcggcccgtgcatcacgcctgacgg +ccaccgtagagctcactgctagtccaggccaccttgaatgccgtacggtgcttggaaataagaccttccgca +catcaataactgatggcgcccaccttgaggttaatggccc------------------------tgagcagt +atgtcttgacatttgacgactcccgccaggcgatgggggctggaccccatagtctcacatatgagctcaccc +ctgctggcctgcaggttaaaatatcttct-------aacggcttggattgtgtcgccgttttcccc---cct +ggcggagcgccaagtgccccaccgggtgaggtcgctgctttttgcagtgccttgtacagatacaatagattc +acccagcgtcattcgctaactggtgggttgtggctgcaccctgaggggcttttgggcttgttccctcctttc +tcccctgggcatgtttgggagtccgcaaatcccttctgcggtgagggcacactttacacccggacctggtca +acatctggtttctcaagtgatttctccccccctgaggcggcttttgccgccccagctcctgatgg----ggg +gttgcctttgggtaccccctcttctgttagtgatgt-----------------ttgggtgct---------- +---------cccgccaccc----tcagaggggt--------------cagtggttgccccaccgcctgcagc +ctcggt------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------------------------tagtaagcctactagcccgcccagc +cctgccatatctaaa-------------------------------------ccccccgctcgtaagccgcc +cccaccgcc--------------------------------------gccggctcgtacccgccggc----- +-------------------ttctttacacttatccggatggggctaaggtctatgcgggttcccttttcgag +tcagactgtgactggttggttaatgcatctaaccctggccaccgccctggtggcggtctttgccacgccttc +taccagcgtttcccagagtcgt------tccatccgactgattttattatgcgcgacgg---cctcgccgcc +tacaccctcaccccgcgtccaatcattcatgctgtggcccctgattatagggttgagcagaaccctaagagg +ctggaggcagcgtaccgcgagacttgttcccgcctcggtacggccgcatacccactgctggggtctgggatt +tatcaagttcctgtgggcttaagttttgatgcctgggagcgtaatcatcgcccaggtgacgagctctacctt +accgagcctgccgccgcg-------------------------------------------------tggtt +tgaggccaataaaccaaccca--------------------------------------------------- +------------------------------------------accagccttaacgattactgaggacgctgc +tc------------gcacggccaatctcgcgcttgagatcg------------attctgctactgaggtagg +tcgtgcctgc---accggttgcactattagccctgggattgttcattaccagttcactgctggggtacctgg +ttccgggaagtctaggtctatacaacaaggggacgttgatgtcgtggtcgtcccaacccgcgagctccgcaa +tagctggcggcgccgtggttttgctgcttttacgccccacacggcagcccgcgtcacagccggccgacgtgt +tgtgattgatgaagcgccttctctcccaccacacttgctattgcttcacatgcagcgagcttcgtcggtcca +ccttctcggtgatcccaaccagatccctgccattgatttcgagcatgcaggcctggtcccggcgattcgccc +cgagctcgccccaaccagttggtggcatgttacacatcgttgccctgccgacgtgtgcgagctcatacgtgg +ggcttaccctaagattcaaaccaccagccgtgtgatgcgttctttgttttggaatgag------ccagcggt +aggccagaagttggtcttcacgcaggcagctaaggcagccaaccccggcgcaattactgtccatgaggctca +gggcgccacttttactgagactactattatagctacggccgatgccaggggcctcattcaatcctctcgtgc +gcatgcaatagtcgcgcttacccgtcacacagaaaaatgtgtcattttggacgcccctggcttattgcgtga +ggttggtatctctgatataattgttaataatttc------------------------------tttctggc +tggtg--gtgaggttggccaccatcgcccctccactataccccgaggtaacccagaccagaatttaaatac- +-----cttgcaggcattccctccatcttgtcaaattagtgcttatcatcagctagctgaggagttgggccac +cgacccgccccggtggctgctgtgttaccgccctgccctgagcttgagcagggtctactctatatgccacaa +gaacttacagtgtccgatagtgtcttggttttcgagctcacggacatagttcactgccgaatggcagcccct +agccagcggaaggctgtcctttcaacacttgtcggcaggtacggccgccgaactaagctgtacgaggcggct +cattctgatgtccgtgagtctttaggaagatttatccctactatcgggccggttcaggccactacatgtgag +ttatatgagttggtggaagccatggttgagaagggtcaggacggttctgctgtgttagagcttgatctctgt +agccgagatgtttcgcgcatcacgttcttccagaaggactgtaataaatttacaacaggcgaaactattgcc +cacggcaaggtgggccagggcatctcggcatggagcaagaccttttgtgctctatttggaccgtggttccgt +gccattgagaaagagatcctggctctgctcccgcccaatattttctacggtgacgcctttgaagagtcagtg +ttctccgcagccatctctggggcgggtactagtatg---gtctttgagaatgatttctccgagtttgacagc +acccaaaataacttctccct------------------cggcctcgagtgtgtcatcatggaagagtgtggt +atgcctcagtggcttatccggctgtaccatctggtgaggtcagcctggaccttgcaggccccgaaagagtcc +ctgaaaggtttttggaagaagcactctggcgagcctggtacactcctttggaacaccgtctggaacatggcg +atcatagcgcactgctatgaattccgtgacttgagagtggcagcgttcaaaggagatgattcagtggtcctt +tgtagtgactatcgccagagccgtaatgcggccgccctgattgctggttgtgggttaaaactgaaggttgac +taccgccccattggattgtacgccggcgtcgtggtggcccctggtctcggggcgctccccgacgttgtccgg +tttgccggccggttatccgagaagaattggggccctggccccgagcgcgctgaacagctgcgcttagcggtt +tgtgattttctcagaaggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tgaggttagtcctgggttggtacataaccttattggcatgctacagactatcgctgatgggaaggcccattt +cactgagactgtcaagcctgtacttgaccttacaaactctattatacagaggttggaatgaataacatgtt- +g----------------tgtgcattgcccatggg------------atcgccatgcgccctcgggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaacccggggctggagctcgctctc +gacagccgccccg---------------cccccttggttcctcttggcgtgaccagtccca----------- +------gcgcccctctgccgccccccgccgtcgatctacccca---------gctggggctgcgccgttaac +tgctgtttctcctgcgcctgatacggctccggtccccgatgttgattcccgcggtgctattctgcgccgcca +gtacaacttgtctacttcccctttaacctcctctgttgcttctggaactaatcttgttttatatgctgcccc +gcttaatcctcttttacccctccaggatggcaccaatactcacatcatggctactgaggcgtctaattacgc +ccagtatcgggttgtccgggccacaatccgctaccgccctttggtgccaaatgctgttggtggctatgcaat +ttctatttctttttggccccagaccacaactactcccacctctgtcgatatgaattctattacttctactga +tgttaggattttggtccagcccggtatagcctctgagttggttatccctagcgagcgcctccattatcgtaa +tcagggttggcgctctgttgagacctcgggtgtggccgaggaggaggcgacatcgggtctggttatgctttg +tattcatggctcccctgtcaattcctacaccaatacgccctatactggggcattaggtcttcttgattttgc +acttgagctcgaatttaggaatttaacccccgggaacactaacacccgtgtatcccggtacactagcacggc +ccgtcatcgcctgcgccgtggcgccgacggaactgctgagctcacgactactgcagccacgcgcttcatgaa +ggacctgcacttca---ctgggacgaat---ggcgttggtgaggttggccgcggcatagccctaaccttgtt +caaccttgctgatacacttctcggcggcttgccgacagaattgatttcgtcggctggaggtcagctctttta +ctcccgcccagtcgtctcggccaatggcgagccgactgtcaaattatacacttccgtcgagaatgcacagca +ggataagggtatcgctatacctcatgacatagatctaggggactcccgcgtggttatccaggactacgataa +ccagcatgagcaggataggcctaccccttcgccggccccgtctcgccccttttcggtcctccgtgccaatga +tgttttgtggctctc-----------------------------tcttaccgctgctgagtatgac------ +caaactacttatggctcatcgaccaaccctatgtatgtctcagatactgtcactcttgt---caatgtggct +acgggagcccaggctgttgctcgctcccttgactggtctaaggtcaccttggatggtcggcctctcaccacc +at-----ccagcaatattctaagacattttatgtgc-tcccacttcgcggtaagctttctttttgggaggct +ggtactactaag--gctgggtatccctacaactataacaccactgccagcgaccagatcttgatagagaatg +cagccggccac------cgtgttgctat-atctacttatactactagccttgg--------------tgctg +gtccagtgtctgtctc-tgcggtcggcgtccttgccccacactctgctctcgctgttctcgaagatactatc +gatt---------accctgcccgtg----ctcatacttttgacgatctttgccctgaatgccgtaatc---t +tggcctgcagggctgtgctttccaatc--------tactattgctgaacttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagttttaattaa-ttt---ta-ccct----------gt +gccc-cct--------tc-tagg-ct-tt----gc-tt-ta-------------------tt-t-------c +ttttttct----gcg----------------tctcgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaa---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH504148.1/17222/1-7222 |Hepeviridae isolate HEV_16_Bristol_UK_180814, complete genome +-----------------------------------a-cgcatg-------------t-----ggtcgatgc- +---catggaggcccaccagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +agcggctaactccgccttggcgaatgctgtggtggtccggccgtttttatcccgtgttcagactgacatcct +tattaacctgatgcaaccccgtcagctcgtattccgccctgaagtcttgtggaaccacccgatccagcgagt +tatacataacgagctagaacaata---ctgtcgtgctc-gtgctggccgctgcctggaggttggggctcatc +caagatctatcaatgacaaccctaatgttttgcaccggtgtttcctccgtccggttgggagagatgtacagc +gctggtattctgccccgacccgtggtccggcggctaactgccgccgctccgcattgcgtggcttgccccctg +tcgatcgtacctactgcttcgacgggttttcccgctgcgcctttgccgctgaaaccggaattgctctgtact +cactgcatgacctctggcctgcggatgtcgcggaggctatggcccgccatgggatgacacgcttgtatgcgg +ccctccatcta-ccccctgaggtcttgttaccacctggtacctatcacaccacctcttatttgctgattcac +gatggtgaccgcgctgttgtaacctacgagggggacaccagcgcaggctataaccatgatgtgtccattctt +cgtgcatggattcgtacaactaagatagttggtgaacacccgctggtcatagagagggtccgtgccattggc +tgccattttgtgctgcttcttactgccgcccctgaaccatctcctatgccttatgtcccgtaccctcgttca +acagaggtgtatgttaggtccatatttggccctggc---------gggtcgccttctctttttccatcagcc +t----------gctctaccaaatcta-cattccatgctgtcccagtccacatctgggaccggctcatgcttt +tcggcgccactttagacgaccaagccttttgctgctcgcgacttatgacctatcttcgcgggattagttata +aggtgaccgttggggcactcgtcgccaacgaaggctggaacgcctcggaggatgcgctcactgctgtgatta +ctgcagcgtacttgactatttgccaccagcgctacctccgaactcaggccatatctaaaggcatgcgtcggc +tagaagtcgagcacgctcagaagtttatcactaggctttatagttggctgtttgagaaatc---------cg +gccgtgattacatccccggccgccaacttcagttctatgcgcagtgccgccgctggctttctgctggcttcc +atttagatcccagagtccttgtttttgatgaagcggttccttgt---cgctgtaggagttttttgaagaa-- +----agttgctggcaagttctgctgctttatgaagtggctagggcagga------gtgcacatgcttcctgg +----------------agccggctgagggactgattggcgactttggc--------catgataacgaggcct +atgagggttccgaggtggaccctgctgagccagcccacctcgatgtctctgggacctacgcagttcatggcc +accagcttgaggctctatacagggcactcaatatcccacatgacattgcggcccgtgcatcacgtttgacag +ccaccgtggagcttaccgctagcccaggccgcctagagtgccgtactgtgctcgggaataagacctttcgca +catcaataactgatggcgcccacctagaggtcaacggccc------------------------tgagcaat +atgttttaacatttgatgactcccgccaggcgatgggggctggtcctcatagtctcacatatgagcttaccc +ctgccggcctgcaggtcaagatatcctcc-------aatggccttgattgtactgctgttttcccc---ccc +ggtggggcaccaagtgccgcaccgggtgaggttgcagccttctgcagtgccttatacagatacaacagattt +actcagcgccactcgctaaccggcggcttgtggttgcaccctgaggggcttctgggcttgttcccccccttt +tcccccgggcatctctgggagtccgcaaaccccttctgtggtgagggcacactttacacccgaacctggtct +acatctggtttttctagtgatttttcacctcctgaggcggctcttgccgccccagcccctgatgg----cag +tttgcccccaggcaccccctcttctgttagtgacgt-----------------ctgggtgct---------- +---------cccaccgccc----tctaaggagt--------------tagtggctactccttacctattagc +cccggt------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------------------------tagtaagcccactagcccgcctagc +cctgctgtacctaag-------------------------------------ccccccgttcgtaagccgcc +cccatcgcc--------------------------------------accagcccgtacccgccggc----- +-------------------ttctttacacttacccggatggtgctaaggtctatgcaggctctctgttcgag +tcagactgtgattggctggttaatgcgtccaatcctggccaccgccccggtggcggcctttgccatgctttt +taccaacgcttcccggagtcgt------tccatccgactgatttcattatgcgcgaggg---cctcgccgcg +tacactttgaccccacgtccgatcatccatgctgtggctcctgattacagggtagagcagaaccccaagagg +ctggaggcggcgtatcgcgagacttgctcccgtctcggcacagccgcttatccattactggggtcggggatt +taccaagtccctgtgggcctgagtttcgacgcctgggagcgtaaccatcgcccgggtgacgagctttacctc +accgagcccgccgccacg-------------------------------------------------tggtt +tgaagctaataaacctaccca--------------------------------------------------- +------------------------------------------accagccctaacgatcaccgaagataccgc +cc------------gcacggctaacctcgcacttgagatcg------------actctgctaccgaggttgg +ccgtgcttgc---actggttgtactgttagccctggtgttgtccattaccagtttactgccggagtgcctgg +ttcagggaagtctagatctatacaacaaggggacgtcgatgttgtggttgtcccaacccgcgagcttcgcaa +tagttggcggcgccgcggttttgccgcttttacacctcatactgcggcccgtgttaccgctggtcggcgagt +tgtgattgatgaggcaccttcactcccgccacatttgctactgcttcatatgcagcgagcctcgtcggttca +cctcctcggcgatcccaaccaaattcccgccattgattttgagcacgcgggcttggtaccggcaatccgccc +tgagcttgccccgactagttggtggcatgttacacatcgttgccccgctgacgtgtgtgagctcatacgtgg +ggcttaccctaagatccagactactagccgtgtgatgcgatccttgttctggaatgag------cccgcggt +gggccagaagctggtattcacgcaggctgctaaggcagccaatcctggtgcaatcactgtccatgaagccca +gggtgctacatttacagagactaccatcatagctacggccgatgctaggggccttatccagtcatcccgtgc +acatgcaatcgtcgcactcacccgccatacagaaaaatgtgtcatccttgatgcccccggtctattgcgtga +ggttggcatctctgatataattgttaataatttc------------------------------tttttggc +tggcg--gtgaggtgggccaccaccgcccctccaccatacctcgaggtaacctagaccggaacttagatat- +-----tctgcaggcattccccccatcttgtcaaattagtgcttaccaccagctagctgaggagctgggccat +cgaccggctccagtggctgctgtattaccaccctgtcctgagcttgagcagggtctactttatatgccacaa +gaactcacagtgtctgatagtgttttggtctttgagcttacggacatagttcactgccgaatggcggcccct +agtcagcggaaggccgtcctctcaacgctcgtcggcaggtacggccgccggacaaagctgtatgaggcagcc +cactctgatgtccgtgagtctctagggaggtttatccctaccattggaccagttcaggccaccacatgtgag +ctatatgagttagttgaagctatggttgagaagggtcaggacggttctgctgtattagagcttgatctctgt +agccgtgatgtctcgcgtattacattctttcagaaggactgcaataaatttacaacaggcgagaccattgct +catggtaaggtgggccagggcatctcggcctggagcaagaccttttgtgctctatttggaccttggttccgt +gctattgagaaggagatcttagcccttctcccacccaatattttctatggtgatgcctttgaggagtcagtg +ttctctgcggccatctcaggagcaggttctagtatg---gtcttcgagaatgatttctccgaatttgacagc +acccaaaataatttctccct------------------cggccttgagtgtgtcatcatggaagagtgtggt +atgccccaatggcttatccggctgtaccatttagttaggtcagcctggactttgcaggccccgaaagagtct +ttgaaaggcttttggaagaagcattctggcgagccaggcacactcctttggaacactgtttggaacatggca +atcatagctcattgttatgagtttcgtgatttgagagtggcagcattcaaaggggatgactcggtggttctt +tgtagtgattaccgccagagccgcaatgccgccgccttgattgctggttgcgggttaaagctgaaggttgac +taccgccctattgggttgtacgctggtgtcgtggtggccccgggcctcggggcgctccctgacgttgtccgg +tttgccggtcggttatctgagaagaactggggcccgggccctgagcgcgccgaacagttgcgtctggcagtt +tgtgatttcctccgaaagttgacgaatgtggcgcaggtctgtgttgatgttgtgtcccgtg-------ttta +tgaggttagtcctgggttggtacataaccttatcggtatgttacagactatagccgacgggaaggcacattt +tactgagactgtcaaacctgtactggatcttacaaattctatcatacagaggttggaatgaataacatgtt- +a----------------tgtgcatcgcccatggg------------atcgccatgcgccctcgggctgttct +gttgttgttcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagccctttg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaatccggggttggagctcgccctc +gacagccgccccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgccgtcgatctacccca---------gctggggctgcgccgttaac +tgctgtctcccctgcacctgatacggctccagtccccgacgttgattcccgcggtgccatcttgcgccgcca +gtacaacctatctacttcccctcttacttcctccgttgcttccggtactaatcttgttttgtatgctgcccc +acttaaccctctcctacctctccaggatggtactaatactcacattatggcaactgaggcgtctaattacgc +tcagtaccgggttgtccgggctacaatccgttaccgccctttagttccaaacgctgttggtggctatgcaat +ttccatttccttttggccccagactacaactacccccacttctgttgatatgaattccatcacctccactga +cgttaggattttagtccagcctggtatagcctctgagttggtcatcccgagcgagcgcctccattatcgcaa +tcagggctggcgctctgttgagacttcgggtgtggccgaggaagaggcgacatcgggtttggttatgctttg +tattcatggttcccccgttaactcctacaccaatacaccctatactggggcgttggggcttcttgactttgc +acttgagcttgaattcaggaatttgacccctgggaacactaacacccgtgtgtcccggtacactagtacggc +ccgtcaccgcctacgccgtggcgccgacgggactgctgagctcacgaccactgcggctacgcgttttatgaa +ggacctgcatttca---ccgggacgaat---ggtgttggtgaagtgggccgtggcatagccctaactctgtt +caatcttgctgatacacttctcggtggtctgccgacagaattgatttcgtcggccggaggtcaactcttcta +ctcccgcccagtcgtctcagccaatggcgagccgactgtcaaattatatacatccgtcgagaatgcacagca +ggataagggcattgctataccacatgacatagatctaggagattcccgcgtggttatccaagattacgataa +ccagcatgaacaggataggccaaccccttcgccggccccgtctcgtcccttctcggtcctccgtgctaatga +tgtcctgtggctctc-----------------------------tctcacctctgctgagtacgac------ +cagactacttatggttcatccaccaaccctatgtatgtttcagacactgtcacctttgt---taatgtagct +acaggagcccaggctgtcgcccgctcccttgactggtccaaggtcactctggacggtcggcctcttaccacc +at-----ccagcagtactctaagacattctatgtgc-tcccacttcgtgggaagctttctttttgggaggct +ggtactaccaag--gccgggtatccctataactataataccactgccagtgatcagattttgatagaaaatg +cagccggtcat------cgtgttgctat-atccacctatactactagtcttgg--------------tgctg +gccctgtatccgtttc-agcggtcggtgttcttgccccgcattctgctttagctgtacttgaagatactatc +gact---------accccgctcgtg----cccatacttttgatgacttttgtcctgagtgtcgtaatc---t +tggtctacaaggctgcgctttccaatc--------tactattgctgaacttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-ttt---tt-cctt----------gt +accc-cct--------tc-tagg-tt-tt----gc-tt-ta-------------------tt-t-------c +ttttttct----gcg----------------tttcgcgctccctg---------------------gaaaa- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH504150.1/17236/1-7236 |Hepeviridae isolate HEV_14_South_Sheilds_UK_130914, complete genome +---------------------------------cca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccaccagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggctaattctgccttggcgaacgctgtggtggttaggccgttcctttcccgtttacagactgacatcct +cattaatttgatgcaaccccggcaactcgtattccgtcctgaggttctgtggaatcacccaatccagcgtgt +catacataatgagttggagcagta---ttgccgcgccc-gcgctggccgctgcttggaggtcggggctcacc +caagatctattaatgacaaccctaatgtattgcaccggtgtttccttcgcccggttgggagagatgtacagc +gctggtactctgccccgactcgcggcccggcggctaactgccgccgttccgcgctacgcggcctaccccctg +tcgatcgtacttactgtttcgacgggttttcccgctgcgctttcgctgctgagactggaattgccttgtact +cactacatgacctctggcctgcggatgtcgcagaagccatggcccgccacgggatgacacgcttgtatgcag +ctctccaccta-ccccctgaggtcttgctaccacccggcacttatcacaccacctcttatctgctgattcac +gatggcaaccgagctgttgtaacctatgagggagatactagtgcgggttataaccatgatgtgtccattctc +cgcgcatggatccgtacaactaagatagttggtgaccatccgctggttatagagagggttcgtgctattggt +tgccattttgtgctacttcttactgctgcccctgagccgtctcctatgccttatgttccatacccccgatca +acagaggtgtatgttcggtctatattcggccctggc---------gggtcgccctctctcttcccgtcagcc +t----------gctccaccaaatcta-catttcatgctgttccagtccatatttgggaccggctcatgcttt +ttggcgctaccttagatgaccaagccttctgctgctcgcggcttatgacctatctccgcgggatcagttata +aggtgacagttggcgcacttgtcgctaacgaaggctggaacgcctcggaggatgcgctcactgctgtgatta +ctgcggcgtacctaaccatctgtcaccagcgctacctccgtacccaggccatatctaaaggcatgcgccggc +tagaagttgagcatgcccagaagttcattactagactttacagttggctgttcgagaaatc---------cg +gacgtgactacatccccggccgccaacttcagttttatgcacagtgccgccgctggctctctgccggcttcc +atttagatcctagagtccttgtttttgatgaggccgttccttgc---cgctgtaggagctttttgaaaaa-- +----ggttgctggcaaattctgctgctttatgaagtggctagggcagga------gtgcacctgcttcttag +----------------aaccggctgagggcctggttggtgactgcggc--------catgataatgaggcct +atgagggctccgaggtggatcctgccgagcctgcccaccttgatgtctctggtacttatgcagtccatggcc +gtcagcttgaagctttgtacagggcgcttaatatcccgcatgacattgcagctcgtgcatcgcgcctgacgg +ccactgtagagctcaccgctagcccgggccgccttgaatgtcgcacggtgctcggaaacaagaccttccgta +catcaataactgacggcgcccaccttgaagtcaatggccc------------------------tgagcagt +atgtcttgacatttgacgacgcccgtcaggcgatgggggctgggccccatagtctcacatatgagctcactt +ctgctggcctgcaagttaagatttcttct-------aatggcctagactgtactgctgtttttccc---cct +ggtggggcgccgagtgccgcaccggctgaggttgcagccttctgtagtgccttatacagatataatagattc +actcagcgccactcgctaaccggtggcctgtggttgcaccctgaggggcttctggggctgttccctcctttc +tcccccgggcatgtctgggagtccgcaaatcccttttgtggtgagggtacactttacacccggacctggtct +acgtctggtttttctagtgatttttctcctcctgaggcggcttttgccgccccaactcctgatgg----ggg +gttgcctttgggtaccccctcttctgttagtgatgt-----------------ttgggtgct---------- +---------cccgccaccc----tcagaggggt--------------cagtggttgctccgccgcctgcagc +cccggc------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------------------------tagtaagcctgctagtctgcccagc +cctgccacacctaag-------------------------------------ccccctgttcgtaagcctcc +ccttccgcc--------------------------------------accggcccgcacccgccgac----- +-------------------ttctttacacttacccggatggggctaaggtttatgcaggctccctgtttgag +tctgactgtgactggctggttaacgcctccaaccctggtcaccgccctggtggcggtctctgccatgctttt +taccagcgtttcccagagtcgt------tccacccgactgattttgtcatgcgcgaggg---cctcgccgcg +tatactttgaccccgcgtccgattattcacgctgtggctcctgattacagggttgagcaaaatccaaagagg +ctggaggcagcttatcgcgagacctgctcccgcctcggcacagccgcttatccactgttggggtctgggatc +tatcaggtccctgtgggtttaagtttcgacgcctgggagcgtaaccatcgcccaggcgatgagctctacctt +accgaacccgctgccgcg-------------------------------------------------tggtt +tgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccttaacaatcactgaggacactgc +tc------------gcacggctaatcttgcgcttgagattg------------actcagctaccgaggtggg +ccgtgcctgc---accggctgcaccgttagacctggaattgttcattatcagtttactgctggggtacccgg +ttccgggaaatctaggtccatacaacagggggacgtcgatgttgtggttgtgccaacccgcgagcttcgcaa +tagctggcggcgccgaggtttcgctgcttttacacctcacacggcggcccgtgtcaccgccggccgtcgtgt +tgtgattgatgaggcaccctcgctcccgccacacttgctactgctgcatatgcagcgggcctcatcggtcca +cctcctcggcgaccccaatcagattcccgccattgattttgagcatgcaggcctggtcccggcgattcgccc +tgagcttgccccgactagctggtggcatgtcacacatcgttgccctgctgatgtttgtgagctaatacgcgg +ggcttaccctaagattcagactaccagccgcgtgatgcgatctttgttttgggacgag------cctgcggt +aggccagaagttggtcttcacgcaggcagctaaggcagccaaccccggtgcaattaccgttcatgaggccca +gggcgccacatttacagagaccactattatagccacagccgatgctaggggcctcatccagtcctctcgtgc +gcacgccattgtcgcacttacccgtcacacagaaaaatgcgtcattttggacgcccccggcctactgcgtga +ggtcggcatttctgatataattgttaacaacttc------------------------------tttttggc +cggcg--gtgaggtaggtcaccaccgcccctctactatacctcgagggaacccagaccagaacttagatac- +-----cttgcaggcattccctccgtcctgccaaattagtgcctatcaccagctagcagaggagctgggccac +cgaccggccccagtggctgctgtattgccgccctgccccgagctcgaacagggtttactctacatgccacag +gaacttacagtgtctgatagcgttctggtatttgagctcacggacatagtccactgccgaatggcggcccct +agtcagcggaaggccgtcctttcaacactcgtcggcaggtatggccgccgaactaagttgtatgaagctgcc +cattccgacgtccgtgaatctttgggaaggtttatccctaccatcgggccagttcaggccaccacatgtgag +ttgtatgagttagtggaggctatggttgaaaagggccaggacggttccgctgtgttagagcttgatctctgc +agtcgtgatgtttctcgtattactttcttccagaaggactgcaataaatttacaacaggtgagactatcgcc +catggtaaggtgggtcagggcatttcggcctggagcaaaactttctgcgctctattcgggccatggttccgt +gccattgagaaggagattttagccctgctcccacctaatatcttctacggcgatgcttttgaagagtcagtg +ttctcggcagccatctctggggcgggttccagtatg---gttttcgagaacgacttctctgagtttgacagt +acccagaataatttctccct------------------cggccttgagtgtgttataatggaagagtgtggc +atgcctcagtggcttatccggctgtaccatctagttaggtcggcctggaccttgcaggccccaaaagagtcc +ttgaaaggtttttggaagaagcattctggcgagcccggcacactcctctggaacactgtctggaatatggcg +ataatagcgcattgctatgaatttcgcgatctgagagtggcagcgttcaaaggggatgattcggtggtcctc +tgtagtgactaccgtcagagccgtaatgcggccgccttgattgctggttgtgggttaaaattgaaagttgac +taccgccctatagggttatacgccggtgtcgtagtggctccgggtctcggggcactccctgacgtcgtccgg +tttgccggtcggctgtctgagaagaactggggcccaggccccgatcgcgccgagcagttacgcctagcggtt +tgtgatttcctccgaaggctgacgaatgttgcgcaggtctgtgttgatgttgtgtctcgtg-------ttta +tggggttagtccagggctggtacataaccttattggcatgttacagactatcgccgatgggaaggcacattt +taccgagactgttaaacctgtactggatcttacaaattctatcatacggaggttggaatgaataacatgtt- +g----------------tgtgcatcgcccatggg------------gtcaccatgcgccctcgggctgttct +gttgttgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcagtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagccctttg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcatatcacaacccggggctggagctcgccctc +gacaaccgccccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgctccccgccgtcgatctacccca---------gctggggctgcgccgttaac +tgccgtatctcctgcacccgacacggccccagttcccgatgttgattcccgtggtgccatcttgcgccgcca +gtataatttgtctacttcgcctctgacttcctctgttgcttctggtaccaatcttgttttgtacgcagcccc +gcttaatcctctcctaccccttcaggacggtaccaatactcatatcatggcgactgaggcgtccaattacgc +ccagtatcgggttgttcgggccacaatccgttatcgccctttggtgccgaatgctgtcggtggctatgcaat +ttctatttccttctggccccagactacaaccacccccacctccgtagatatgaattctattacttctactga +tgttaggatcttagttcagcctggtgtggcctccgagttggtcatcccgagcgagcgcctccattatcgcaa +ccaaggttggcgttctgttgagacctcgggtgtggccgaggaggaggctacatcgggtttagttatgctttg +tattcatggctctcctgtcaactcctataccaacacgccctatactggggcattgggacttcttgactttgc +acttgagcttgaatttaggaatttgacccctgggaacaccaacacccgtgtatcccgatacactagtacggc +ccgtcaccgcttacgccgtggtgctgacgggaccgctgagctcaccaccactgctgccacacgtttcatgaa +ggacctgcacttca---ctgggatgaat---ggtgtcggcgaggttggccgcggcatagccctaaccctgtt +caatcttgctgatacacttctcggcggtttgccgacagaattgatttcgtcggccggaggtcaactctttta +ctcccgcccagttgtctcggccaatggcgagccgactgtcaaattgtatacttctgttgagaatgcacagca +agataagggcattgctataccacatgatatagatttaggggactcccgtgtggttatccaggattacgacaa +tcagcatgaacaggataggcccaccccttcgccggctccgtctcgccccttctcggtcctccgtgctaatga +tgttttgtggctctc-----------------------------tcttactgccgctgagtatgac------ +caaactacttacggctcgtcgaccaatcctatgtatgtttcagacaccgttacctttgt---caacgtggcc +acgggggctcaggctgtcgctcgatcccttgattggtctaaggtcactttggatggtcgacctcttactact +at-----tcagcagtactccaagacattttatgtgc-tcccacttcgtgggaagctttctttctgggaggca +ggcaccactaag--gctggctacccttataattacaataccactgctagtgatcagattctgatagagaatg +cagccggccac------cgtgttgccat-atctacctataccactagtctcgg--------------cgctg +gcccagtgtctgtctc-tgcggttggtgttcttgccccgcattctgctttagctgtgcttgaggacactact +gatt---------accctgcccgtg----cccacactttcgatgacttctgccctgagtgccgtaatc---t +cggcctgcagggctgtgctttccaatc--------tactgttgctgaacttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-ttt---ta-ccct----------gt +gccc-cct--------tc-tagg-ct-tt----gc-tt-ta-------------------tt-t-------c +ttttttct----gcg----------------tcccgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaa---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH504151.1/17216/1-7216 |Hepeviridae isolate HEV_13_Swansea_UK_210814, complete genome +-------------------------------------------------------------------atgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggtccggccgtttttatcacgtgttcaaactgatattct +tattaatttgatgcaaccccggcagcttgtgtttcggcctgaagtcctttggaatcatccgatccagcgagt +catacataatgagttggagcaata---ctgccgagccc-gtgcaggccgctgccttgaggtgggcgctcatc +ccagatccattaacgacaaccccaatgttctgcaccggtgctttctccgcccggttggaagagatgtccagc +gctggtactctgcccccactcgtggtccagcggccaattgccgccgttctgcgctacgcggtctgcccccag +tcgatcgcacatactgcttcgacgggtactcccgctgtgcctttgccgctgagaccgggatcgctttatact +cattgcatgacctttggccctccgacgttgcggaggccatggcccgccacgggatgacacgcttgtatgctg +ccctccaccta-ccccccgaggttttgctaccacccggcacttaccacacaacctcttatctcctgattcat +gacggcaaccgtgccgtcgtgacttatgagggggatactagtgcgggctataaccatgatgtgtctatactt +cgtgcttggatccgcaccactaaaatagttggtgatcacccactggtgatagagagggttcgcgccattggc +tgccattttgtcttacttcttactgcagcccccgagccgtccccaatgccttatgttccgtaccctcgttca +acagaggtgtacgttagatctatatttggccctggt---------gggtcgccgtctctttttccatcagcc +t----------gctctaccaaatcca-catttcatgctgttccggttcatatttgggaccggcttatgctct +ttggtgccaccttagacgatcaggccttctgctgctcgcggctcatgacctatctccgcgggattagttata +aagttaccgttggcgcacttgttgccaacgagggctggaatgcctcagaggacgcgcttaccgctgtgatta +ccgcagcgtacttgactatctgtcaccagcgctatttacgaacacaggccatttctaaaggcatgcgtcggc +tagaggttgagcacgcccaaaagtttattacaaggttatatagctggctgtttgaaaagtc---------ag +gccgtgactacatccccggccgccagcttcagttttatgcacaatgccgccgctggctctcggctggctttc +acctggaccctagagttctcgtttttgatgaggcggtcccctgc---cgttgccggagcttcttgaagag-- +----ggctgccgggaaattttgttgttttatgaaatggttggggcagga------gtgcacctgttttctgg +----------------agccagcggagggcctggttggtgattgtggc--------catgataacgaggcct +atgaagggtctgaggtggaccctgccgaacctgctcaccttgatgtttctgggacttatgcggtccacggcc +gtcagcttgaggctctatatagggcgcttaatatcccggatgacattgcggcccgtgcgttacgtctgacgg +ccactgtagagcttgccgccagcccgggtaggctcgagtgccgcacggtgcttgggaataaggttttccgta +catcaatagccgatggtgcccacctcgaagccaacggtcc------------------------cgagcagt +acgtcttgacattcgatgattctcgtcaggcaatgggggctgggcctcacagcctcacgtatgaacttgttc +ctgccggtctgcaggttagaatatcttct-------aatggcttggactgtaccgctatattcccc---ccc +ggtggggcgccaagcgcagcaccgggtgaggtggcggctttctgcagtgccctatacaggtacaataggttt +actcagcgccactcgctgaccggcgggctgtggttgcaccctgaggggctccttggtttgttcccccctttc +tccccggggcatcattgggagtctgcaaaccccttttgcggcgagagcacactttatacacggacttggtct +acatctggtttctctagcgacttctccccgcccgaggcagtttacgccgcccctacccctgacac----ggg +gctgccctcgggtgtcccctcgtctgctagtgatgt-----------------ttgggtgct---------- +---------tccaccgccc----tccgaggggt--------------cggttgtcgctccaccaccagaaac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtaagccagctaacctgccttgc +cccaccacacctggg-------------------------------------ccccccgtccgtaagccacc +tacaccacc--------------------------------------gccggctcgcactcgccggc----- +-------------------ttctttacacgtatcctgacggggccaaggtgtatgctggttccttgtttgag +tcaggctgcgattggttggttaatgcatcaaaccctggccaccgccctggcggcggtctctgccatgcattc +taccagcgtttcccggagtcgt------tccacccgaccgattttgttatgcgtgaagg---cctcgccgct +tacactttgagcccgcgcccgatcattcacgccgtggcccccgactatagggttgagcagaaccctaagagg +ctggaggcggcatatcgtgagacctgctcccgcctcggtacagctgcctatccgctactagggtctgggatt +taccaagtccctgtaggcttaagctttgacgcctgggagcgcaaccaccgcccgggtgacgagctttatctc +actgaaccagctgccgcc-------------------------------------------------tggtt +cgaggccaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaagacactgc +cc------------gcacagctaaccttgcgcttgagattg------------actccgctactgaggtggg +tcgtgcttgc---gccggctgcactatcaatcccgggatagtccattatcagtttaccgccggggtccctgg +ctccgggaaatctaggtccattcggcagggggacgttgatgtcgtggttgtgccaactcgtgagcttcgtaa +cagctggcgacgccgcggctttgccgcttttacaccccacacagcagcccgtgttactgccggccggcgtgt +ggtgatagatgaggcgccttcgctaccaccgcacttgctgctgctccatatgcagcgagcttcatcggtcca +tcttcttggtgatcccaaccagatccctgctatcgattttgagcacgccggtttggtcccagcgatccgtcc +cgagcttgcccctactagctggtggcacgtcacccatcgctgccccgccgatgtgtgtgagcttatacgcgg +ggcttacccaaagattcagacgaccagccgtgtgttgcgatctttattctggaatgag------cctgcggt +gggtcagaggctggtcttcacgcaggcagccaaggcggccaaccccggtgcgattaccgtccatgaagccca +aggtgccacgtttacggagactaccatcatagccacggccgacgctagaggtcttattcagtcttcccgtgc +acacgccatcgttgcactcactcgccatacagagaaatgcgttattcttgacgctcctggcctactgcgcga +ggttggcatatctgatataattgttaataacttt------------------------------ttcctggc +cggcg--gtgaagtgggccaccatcgcccatctattataccccgcggtaacccagaccagaatttagacac- +-----cctgcgagcgttccctccgtcctgtcaaattagtgcctaccaccagctggctgaggagctcggccac +cgtccggccccagtggccgctgtcctgcccccctgccctgagcttgagcaggggttactctatatgccgcag +gagcttacggtgtccgatagtgtcctaatctttgaactcacggacatagttcattgtcgtatggcagctccc +agtcaacgtaaggcggttctttcgacgctcgtcggtaggtatggccgccgaacgaagctgtatgaagcggcc +cattccgacgttcgcgagtctttagggaggttcatccctactatcgggccggttcaagccactacgtgtgag +ctatatgagctggtcgaggccatggtggagaagggccaagacggctccgctgtgctcgagctcgacctttgc +agtcgtgatgtctctcgtatcacattcttccagaaggattgtaataaattcacaacaggtgagaccattgct +cacggcaaggtcggccagggcatttcggcttggagtaaaaccttttgtgctttattcggcccgtggttccgt +gctattgagaaggagattctggctctgctcccacctaacattttctatggcgatgcctatgaggagtcagtg +ttctctgcagccgtctctggggctggctccagtatg---gtttttgagaatgatttttctgagttcgatagt +acccaaaacaatttttccct------------------tggccttgagtgcgttattatggaagagtgtggc +atgccccagtggcttattcgactgtaccatttagtgagatcagcctggaccctgcaagccccgaaagagtct +ttgaaaggtttttggaagaagcattccggcgagcctggcactctcctttggaacaccgtctggaatatggcg +atcatagcacactgctatgaatttcgtgatttgagagtggcagcgtttaagggggatgattctgttgttctc +tgcagtgattaccgtcagagccgcaatgcagctaccctgatagccggctgtgggttgaagctgaaggttgat +tatcggcctataggtttgtatgccggtgttgttgtggccccgggcctcggagcacttcctgatgtcgtccgg +tttgccggtcgattatctgagaagaactggggcccgggccccgagcgcgccgagcagttgcgcctagcagtt +tgtgattttcttcgagggctaacgaatgttgcacaggtttgtgttgacgttgtgtcccgtg-------ttta +tggggtcagccccgggctggtgcataaccttattggcatgctacagactattgctgacggaaaggcccactt +tactgagactattaaacctgtgttagatcttacaaattctataatacagaggttggaatgaataacatgtt- +c----------------tgtgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gttgttgctcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgcgggcg-gcgcagcggcagtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcgcaacccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgcggtttcaccagcgcctgatacagccccagttcccgatgttgattcccgtggcgctattttgcgccgcca +gtataatctgtccacctcccctttaacttcatctgttgcttctggaaccaatcttgtattgtacgctgcccc +tcttaatcctcttctgcccctccaagatggcactaatactcacatcatggcgactgaggcgtctaattatgc +tcagtaccgggttgtccgggccacaatccgctatcgccccttggtgccgaatgccgtcggcggttatgcaat +ttctatctccttctggcctcagactacaactacacccacctctgttgatatgaattccatcacttctactga +tgttaggattttagtccagcctggcatagcctctgagttggtcatccctagtgagcgcctccattatcgtaa +tcagggctggcgatctgttgagacatcgggtgtagctgaggaggaggcgacatcaggcttggtcatgctttg +tattcatggttcccctgttaattcttataccaacacgccttataccggagcattgggactcctcgacttcgc +actcgagcttgaatttagaaatttgacccctgggaacactaacactcgtgtgtctcgttacaccagcacagc +ccgacatcgtctgcgtcgtggtgccgatggaacagccgaacttacaaccactgcagccacacgttttatgaa +ggatttgcatttca---ccgggacaaat---ggtgttggtgaggtgggccgtggtatagctttaacgctatt +taaccttgctgacacacttctcggcgggctgccgacagaattaatttcgtcggccggaggtcaattgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctccgtcgagaatgcacagca +ggacaagggcattgctataccacacgatatagatttaggggattcccgtgtggttatacaagactatgacaa +ccaacacgaacaggaccggcctaccccgtcgccggccccgtcccgccctttctcagtccttcgagctaatga +tgtcctgtggctatc-----------------------------tttgactgcggctgaatatgac------ +cagaccacctatggttcatcgaccaaccctatgtatgtttcagatactgtcacatttgt---taatgtggcg +acaggcgcccaggctgttgctcgttcccttgattggtccaaggtcactctggatggccggccactcacaacc +at-----ccagcagtactctaagacattttatgttt-tgccgcttcgtggtaagctttccttttgggaggcc +ggcacgactaaa--gctggctacccttataactataatactactgctagtgaccagattttgattgagaatg +cagccggccac------cgtgttgctat-atctacttacactactagccttgg--------------tgccg +gtcctgtgtctgtctc-tgcggtcggtgttcttgctccgcactccgctttagctgtgcttgaagatactatt +gact---------atcctgcccgtg----ctcatactttcgatgatttctgccctgagtgccgtaatc---t +cggtttgcagggctgtgctttccagtc--------tactattgctgagcttcagcgcct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattaa-tt----tc-cccttttt------gt +gccc-cct--------tc-taaa-tt-ct----gt-tc-tgt----------------tatt-t-------c +ttttttttt-ctgcg----------------tctcgcgctccctg---------------------gaa--- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH504152.1/17235/1-7235 |Hepeviridae isolate HEV_12_Belfast_UK_300714, complete genome +----------------------------------ca-cgcatg-------------t-----ggtcgatgc- +---catggaggcccaccagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggctaactccgccttggcgaatgctgtggtggtccggccgtttttatctcgtactcagactgacatcct +cattaatttgatgcaaccccggcagctcgtatttcgacctgaggttttgtggaaccatccgatccagcgagt +catacataatgagctggagcagta---ttgccgcgctc-gtgccggccgctgcctggaggtcggggctcatc +caagatccatcaatgacaaccctaatgtcctgcaccggtgctttctccgtccggttggtagggatgtacagc +gttggtactctgccccgactcgcggcccggcggctaattgccgccgttccgcgttacgcggcttaccccctg +tcgaccgtacctactgtttcgacgggttttctcgctgctccttcgctgctgaaactggaattgccttatatt +cactacatgacctctggcctgcggacgttgcggaggccatggcccgccatgggatgacacgcctgtacgcag +ccctacatttg-ccccctgaggtccttttaccacctggtacctatcataccacctcctatttgttgattcac +gacggcaaccgcgccgtcgtgacttacgagggtgataccagtgcgggctataatcatgatgtatccattctc +cgtgcatggattcgtacaaccaagattgttggtaaccacccgctggttatagagagggtccgtgctattggc +tgccattttgtgttacttctcactgctgcccccgagccatctcctatgccttatgtcccgtaccctcgctcg +acagaggtgtatgttaggtctatatttggccccggt---------gggtcgccatctctgtttccatcagcc +t----------gctctactaagtcaa-catttcatgccgtcccggtccacatctgggaccggctcatgcttt +tcggcgccactttggacgaccaagccttttgctgttcgcggcttatgacctatctccgcgggattagttaca +aagtgaccgttggtgcactcgttgccaacgagggctggaacgcctcagaggatgcgctcaccgccgtgatca +ctgcagcatatttgactatttgtcaccagcgctacctccggacccaggctatatctaaaggtatgcgtaggc +tggaagtcgagcacgcccagaagtttattactaggctttatagctggctgtttgagaagtc---------cg +gtcgtgactatatccccggtcgtcaactgcagttctacgcgcagtgccgccgctggctctctgccggctttc +acttagaccctagagttcttgtttttgatgaggctgttccttgc---cgctgtaggagctttctgaagaa-- +----ggttgctggcaagttctgttgttttatgaagtggctaggacagga------gtgcacttgcttcctgg +----------------agccggctgagggtttggtcggtgactgtggc--------catgataatgaggcct +acgagggttccgaggtagatcctgccgaacccgcccacctcgatgtttctgggacctatgcagttcatggcc +gtcagcttgaggctctatatagggcgctcaatattccacatgacattgcggcccgtgcatcacgtttgacgg +ccaccgtagagcttaccgctggcccgggccgccttgaatgtcgcacagtgcttggaaataagacctttcgca +catcaataactgatggtgcccacctcgaggttaatggccc------------------------tgagcagt +atgttctaacatttgacgactcccgtcaagcgatgggggctgggcctcacagtcttacatacgaactcaccc +ctgctggcctgcaggttaatatatcttgc-------aatggccttgattgcaccgctgtctttccc---cct +ggaggggcaccgagcgccgaaccgggtgaggttgcggccttctgcagtgccttatatagatacaatagattc +actcagcgccattcgctaactggtgggttgtggctgcaccctgaggggcttttgggtttgttcccccctttc +tcccccgggcatctctgggagtctgcaaaccccttttgcggtgagggcacactctacactcgaacctggtct +acatctggcttttctagtgatttttccccccctgaggcggcttttgccgccccagccccaaatgg----agg +gctgcccccgggcacccccttttctgttagtgacgt-----------------ctgggtgct---------- +---------cccgccgccc----tctgagggat--------------cggcggctactccaccacctgcggc +cctggt------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------------------------ttgtaagcccactagcccgcccagc +cccgccacatctaag-------------------------------------ccccccgctcgtaagccgcc +tccacctcc--------------------------------------gccgacccgtacccgccggc----- +-------------------ttctctacacttatccggatggggctaaggtttatgcaggttccctctttgaa +tcagactgcgactggctggtcaacgcatccaaccctggtcaccgtcctggtggtggcctttgtcatgctttc +tatcagcgcttcccagagtcgt------tctacccggccgattttgtcatgcgcgaggg---cttagccgcg +tacaccttgaccccacgcccgattatccatgctgtggcccccgattacagagttgagcagaatcccaagagg +ctggaggcggcgtatcgcgagacctgttcccgtctcggcacagccgcctacccattactggggtcggggatc +taccaggtccccgtgggcttaagctttgacgcctgggagcgtaaccatcgcccgggcgatgagctctatctc +accgagcccgctgctgcg-------------------------------------------------tggtt +tgaggccaataagccgactca--------------------------------------------------- +------------------------------------------gccagctctaacgattactgaagatactgc +tc------------gcacggctaacctcgcgcttgagattg------------attctgccaccgaggtagg +ccgtgcttgt---accggttgtactgtcagccctgggattgttcattatcagttcactgctggggtgcccgg +ttccgggaaatctaggtctatacaacaaggggacgtcgacgttgtggttgtgccaacccgtgaactccgcaa +cagctggcgacgccgtggctttgctgcttttacacctcacacggcagcccgcgtcactgccggtcgacgtgt +tgttatagatgaggcaccttcgctcccgccacacttgctgttgctccacatgcagcgagcttcatcagtcca +tctcctaggtgaccccaatcagatccccgccattgactttgagcatgcgggcttggtaccggcgatccgccc +tgagcttgccccaactagttggtggcatgttacacaccgttgccctgctgatgtgtgtgagctcatacgcgg +ggcttatcctaagatccagactactagccgcgtgatgcgatccttgttttggaacgaa------cctgccgt +aggccagaagttagtcttcacgcaggcagctaaggcggccaaccccggcgcaattactgttcatgaagccca +gggcgctacatttacagagactaccattatagccacggccgatgcaaggggcctcatccagtcttctcgtgc +gcatgcaatcgtcgcacttacccgtcacacagaaaaatgcgtcattcttgacgctcccggcctcttgcgtga +ggtcggtatctctgatataattgtcaacaatttt------------------------------ttcctggc +tggcg--gtgaagtaggccaccaccgcccctctaccataccccgaggcaatccagaccggaatttagacac- +-----cctgcaggcatttcctccatcttgccagattagtgcctaccaccagttagctgaggagttgggccac +agaccagccccagtggctgctgtgctgccgccctgccctgagcttgagcagggcttactctacatgccacaa +gagctcactgtgtccgatagcgttctggttttcgagctcacagacatagtccactgccgaatggcggcccct +agtcaacggaaggccgtcctttcaacgctcgtcggcaggtacggtcgccgaacgaggctgtatgaggcggct +cactctgatgtccgcgagtctttagggaggtttatacctactattggaccagttcaggccaccacatgtgag +ctgtacgagctagtagaggctatggttgagaagggccaggacggttccgctgtgctggagcttgatctctgc +agccgagatgtttcgcgcattacgttcttccagaaggactgtaataagtttacaacaggtgagactattgcc +catggtaaggtgggccagggcatctcggcttggagcaaaaccttttgtgctctttttggaccgtggttccgt +gccattgagaaggaaattctggccctgctcccacctaacatattctatggtgacgcttttgaagagtcagtg +ttctctgcagccatttctggggcgggctctagtatg---gtttttgaaaatgacttctctgagtttgacagt +acccaaaacaatttctccct------------------cggcctcgagtgtgttatcatggaagaatgtggc +atgccccagtggctcatccggttgtaccacttagtcaggtcagcctggactctgcaggctccgaaagagtcc +ctgaaaggcttttggaagaagcactctggtgagcccggtacgctcctctggaacactgtttggaatatggcg +atcattgcgcattgctacgaatttcgtgatctgagggtggcagcgttcaaaggggacgattcagtggtcctc +tgcagtgattaccgccagagtcgtaacgcggccgccttgattgctggttgtgggttaaaattgaaggttgat +tatcgccccatagggctgtacgccggtgtcgtagtggccccgggtctcggggcactccctgacgtcgtccgg +ttcgccggccggttgtctgagaagaattggggtccgggtccagagcgtgctgagcagttgcgtctagcagtt +tgtgatttccttcgagggctgacgaacgttgcgcaggtctgtgtggatgttgtgtcccgtg-------ttta +cggggttagtcctgggttggtacataaccttattggcatgctacagactatagccgatgggaaggctcattt +cactgagactatcaaacctgtactggatcttacaaattctatcatacagaggttggaatgaataacatgtt- +g----------------tgtgcatcgcccatggg------------atcaccatgcgccctcgggctgttct +gctgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcagtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcgcaacccggggctggagctcgctctc +gacagccgccccg---------------ccccctcggttcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgcccctcgccgtcgatctacccca---------gctggggctgcgccgttaac +tgctgtctcccctgctcctgatacagccccagttcctgacgttgattcccgcggtgctattctgcgccgcca +gtacaatttgtctacttcccctctaacttcctctgttgcttctggtactaaccttgtcttgtatgctgcccc +gctgaaccccctcttacctctccaggacggcactaatactcatattatggcgactgaggcgtctaactacgc +ccaataccgggttgtccgggctacaatccgttaccgccctttggtgccgaatgctgtcggcggctatgcaat +ttccatatccttctggccccagaccacaactaccccaacctctgtcgacatgaattccatcacctctactga +tgttaggattttagttcagcccggtgtggcctctgaattggtcatccctagcgagcgcctccattatcgcaa +tcagggttggcgttctgttgagacctcgggtgtggccgaggaagaggccacatcaggcttggttatgctctg +tattcatggttcccctgttaattcttacaccaacacgccctatactggggcattgggacttcttgactttgc +acttgaacttgaatttcggaacttgacccctgggaacactaacacccgtgtatcccggtacactagcacggc +ccgtcaccgcttgcgtcgtggtgccgacgggaccgctgagctcacgaccactgcggccacgcgctttatgaa +ggacctgcatttca---ctgggacgaat---ggcgttggtgaggtgggccgtggtatagccctaactttatt +taatcttgctgatacacttctcggcggtttgccgacagaattgatttcgtcggctggaggccagctctttta +ttcccgcccagttgtctcagccaatggcgagccagctgttaaattatacacttccgtcgagaatgcacagca +ggataagggtattgctataccacatgacatagacctaggagattcccgcgtggttatccaggattatgacaa +ccagcatgagcaggataggcccaccccttcgccggccccgtctcgccccttttcagtcctacgtgctaatga +tgtcttgtggctttc-----------------------------tctcactgccgctgagtatgat------ +caaaccacttacggctcgtcgaccaatcctatgtatgtttcagatactgttacttttgt---caatgtggct +acgggagctcaggctgttgcccgctcccttgactggtctaaggttactctggatggtcgacctcttactact +at-----tcagcaatactctaagacattctatgttc-tcccactccgcgggaagctctctttttgggaggcc +ggcactactaag--gccgggtatccttataattataacaccactgctagtgatcagattctgatagagaatg +cagcaggccac------cgcgttgctat-atctacctataccactagcctcgg--------------tgctg +gcccagtgtctgtttc-cgcagttggtgttcttgccccccattctgctttggctgtgcttgaagatactatt +gact---------accccgctcgtg----cccatacttttgatgatttctgccctgagtgccgcaatc---t +cggcctacagggctgtgcttttcaatc--------tactatcgctgaacttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-ttt---ca-tcct----------gt +gccc-cct--------tc-taag-tt-ct----gc-tt-ta-------------------tt-t-------c +tttcttct----gcg----------------ttccgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaa---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH504154.1/17197/1-7197 |Hepeviridae isolate HEV_10_Hillingdon_UK_020315, complete genome +-------------------------------------catatg-------------t-----ggtcgatgc- +---catggaggcccaccagtttatcaaggctcctggcatcactactgctattgag---caggctgctctagc +agcggctaactctgccctggcgaatgctgtggtagttaggccttttctctctcatcagcagatcgagatcct +tattaacctaatgcaacctcgccagcttgttttccgccccgaggttttctggaatcaccccattcagcgtgt +catccataatgagttggagcttta---ctgccgcgccc-gctccggccgctgcctcgaaattggcgcccacc +ctcgctcaataaatgataatcctaatgtggtccaccgctgcttcctccgccctgttgggcgtgatgttcagc +gctggtatactgcacctactcgcgggccggccgctaattgccggcgttccgcactgcgcgggctccccgctg +ccgaccgcacctactgcttcgacgggttttctggctgtaactttcccgctgagacgggcattgccctctatt +ccctccacgatatgtcaccatctgacgtcgccgaggccatgtctcgccatggtatgacgcggctttatgccg +ccctccatctc-ccgcccgaggttttgctgccccctggcacataccgcactgcatcgtatttgctgattcat +gacggcaggcgcgttgtggtgacgtatgagggtgacactagtgctggctacaaccatgatgtctccagcctg +cgctcctggattagaaccaccaaggtcactggagaccacccccttgttatcgagcgggttagggccataggc +tgccactttgtcctcttgcttacggcggccccggagccatcacctatgccttatgtcccttacccccggtcc +accgaggtctatgttcgatcgatttttggcccgggt---------ggtactccttctttatttccaacttca +t----------gctcaactaaatcca-ccttccacgccgtccctacccatatttgggaccgtcttatgttgt +tcggagccaccctggatgaccaagccttctgttgctcccgtttaatgacctatcttcgcggcattagctaca +aggtcactgtgggtacccttgtggctaacgagggctggaatgcctctgaggacgccctcacagctgtcatca +ccgccgcctatcttaccatttgtcaccagcggtatctccgcacccaggctatatctaaagggatgcgccgcc +tggaacgggagcatgcccagaagtttataacacgtctctacagctggctcttcgagaagtc---------cg +gccgtgactacatccccggccgtcagttggagttttacgctcagtgtaggcgctggctttcggccggcttcc +atcttgacccacgggtgctggtctttgacgagtcggccccctgc---cactgcaggactgtgatccgtaa-- +----ggctctttcaaagttctgctgcttcatgaagtggcttggtcagga------gtgtacttgtttccttc +----------------agcctgcagagggcgtcgttggcgaccaaggc--------cacgataatgaggcct +atgaggggtccgatgttgaccccgctgagtccgccattagtgatatatctgggtcctatgtcgtccttggca +cagccctccaacccctttaccaggctctcgatctccccgctgagattgtggctcgtgcgggtcggttgaccg +ccacagtaaaggtctcccagaccgatgggcggattgattgtgagacccttcttggtaacaaaaccttccgca +cgtcattcgttgacggggcggtcctagagaccaatggccc------------------------tgagcgcc +acaatctttcttttgatgtcagtcagagcactatggctgctggccctttcagtctcacctatgccgccactg +cagctgggctggaggtgcgttatgttgct-------gccgggcttgaccaccgggcggttttcgcc---ccc +ggagtttcaccccggtcagcccctggcgaggtcaccgccttttgctctgccctatacaggtttaatcgtgag +gcccaacgccactcgctgaccggtaatctatggtttcatcctgaggggctccttggcctctttgccccgttt +tcacccgggcatgtttgggagtcggccaatccattctgtggcgagagcacattatatacccgcacttggtcg +gaggttgacgccgtttctagtccggcccggcctgatttgggttttatgtctgagccctctttacctagtagg +gccgccac----------------------------acctgt-----------ccctgcggc---------- +---------ccctctacct----tcctttgcac--------------cggatccatctccccccccctctgc +cccgg------------------------------------------------------------------- +-------------------------------------------------------------cgc-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcgatgagccggct------cctggc +actaccgc-----------------cgg------------------------ggccccggccataacccacc +aga----------------------------------------------cggcccggcaccgccgcc----- +-------------------tgctcttcacctacccggacggctctaaggtatttgccggctcactgttcgag +tcgacatgtacgtggcttgtcaacgcgtctaatgttgaccaccgtcctggtggcgggctttgccatgcattt +taccaaaggtaccccgcctcct------ttgacgccgcctcttttgtgatgcgtgacgg---cgcggccgcg +tacacattaaccccccggccaataatccatgctgtcgcccctgattataggttggaacataacccaaagagg +cttgaggctgcttatcgggagacctgctcccgccttggcaccgctgcatacccgctcctcgggactggcata +taccaggtgccgatcggccccagttttgacgcctgggagcggaatcaccgccccggggatgagttgtacctc +cctgagcttgctgccagg-------------------------------------------------tggtt +tgaggccaatcggccgacccg--------------------------------------------------- +------------------------------------------cccaactctcactataaccgaggatgttgc +ac------------ggacagcgaacctggccattgagctgg------------actcagccacagatgtcgg +ccgggcctgt---gccggctgccgggtcacccccggcgttgttcagtaccagtttactgctggtgtgcctgg +gtccggcaagtcccgctctattactcaagccgatgtggacgttgtcgtggtcccgacacgcgagttgcgcaa +tgcctggcgccgccgtggcttcgctgctttcactccacacacagccgctagagtcacccaggggcgccgggt +tgtcattgatgaggctccgtcactcccccctcatctgctgctgcttcacatgcagcgggccgccaccgtcca +tctccttggcgacccgaaccagatcccagccatcgactttgagcacgctgggcttgttcccgccatcaggcc +cgacctggcccctacctcctggtggcatgtcacccatcgctgccctgcggatgtttgtgagctgatccgtgg +tgcataccccatgatccagaccactagccgggtcttccgttcgctattctggggcgaa------cctgccgt +tgggcagaaactagtgtttacccaggcggctaaggccgccaaccccggctcagtgacagtccacgaggcaca +gggcgctacctatacggagaccaccattattgccacggcagacgcccgaggccttattcagtcgtctcgggc +tcatgccatcgtcgccctgacgcgccacactgagaagtgcgtcatcattgacgcaccgggcctgcttcgcga +ggtgggcatctccgatgcaatcgtcaataacttt------------------------------ttcctcgc +cggtg--gcgaagttggtcaccagcgcccatctgttattccccgtggcaatcctgatgccaatgttgacac- +-----cctggctgcctttccaccgtcttgccagattagtgccttccatcagctggctgaggagcttggccac +agacctgcccctgttgcagctgttttaccaccttgccccgagcttgaacagggcctcctctacctgccccag +gaactcaccacctgtgatagtgttgtaacatttgaattaacagatattgtgcactgccgcatggccgccccg +agccaacgcaaggctgtgctgtccacactcgtgggccgctacggccgtcgcacaaaactttacaatgcctcc +cactctgatgttcgcgactctcttgcccgttttatccccgccattggccccgtacaggttacaacctgtgaa +ttgtacgagctagttgaggccatggtcgagaagggccaggatggctccgccgtccttgagctcgacctttgc +aaccgtgacgtgtccaggatcaccttctttcagaaagattgtaataagttcaccacgggcgagaccattgcc +catggtaaagtgggccagggcatttcggcctggagcaaaaccttttgcgccctctttggcccttggttccgt +gctattgagaaggctattctggccctgctccctcagggtgtgttttacggtgatgcctatgatgacaccgtc +ttctcggcggctgtggctgcagcaaaggcatccatg---gtgtttgagaatgacttttctgaatttgactcc +acccagaataatttctctct------------------aggccttgagtgtgctattatggaggagtgcggg +atgccgcagtggctcatccgtttgtatcaccttataaggtctgcgtggattttgcaggccccgaaggagtct +ctgcgggggttttggaagaaacactccggtgagcccggcactctcctatggaatactgtctggaatatggcc +gttattacccactgctatgacttccgcgatttgcaggtggctgccttcaaaggtgatgattcgatagtgctt +tgcagtgagtaccgtcagagcccgggggctgctgtcctgatcgccggctgtggcttgaagttgaaggtagac +tttcgcccgattggtttgtatgcaggtgttgtggtagcccctggccttggcgcgcttcctgatgttgtgcgc +ttcgccggccggcttaccgagaagaactggggccctggccctgagcgggcggagcagctccgtctcgctgtg +agtgattttctccgcaagcttacgaatgtagcacagatgtgtgtggatgttgtttcccgtg-------ttta +tggggtttcccctgggctcgttcataacctgattggcatgctacaggctgttgctgatggcaaggcccattt +cactgagtcagtaaagccagtgcttgacctgacaaactcaattttgtgtcgggtagaatgaataacatgtc- +t----------------tttgctgcgcccatgggt---------tcgcgaccatgcgccctcggcctatttt +gctgctgttcctcatgtttctgcctatgctgcccgcgc---------------------------------- +-caccgc------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcagttc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----caatcccctatattcat---- +--------------ccaaccaaccccttcgcccccgatgtcaccgctgcggccggggctggacctcgtgttc +gccaacccgcccg---------------accactcggctccgcttggcgtgaccaggccca----------- +------gcgccccgccgctgcctcacgtcgtagacctaccgca---------gctggggccgcgccgttaac +cgcggtcgctccggcccatgacaccccgccagtgcctgatgtcgactctcgcggcgccatcctgcgccgtca +gtataacctatcaacatctcccctcacctcttccgtggccaccggcaccaatctggttctctatgccgcccc +ccttagcccgcttttacccctccaggacggcaccaatacccatataatggccacggaggcttctaattatgc +ccaataccgggttgcccgtgccacaatccgttaccgcccgctggtcccaaatgctgtcggcggttatgccat +ctccatctcattctggccacagaccaccaccaccccgacgtccgtcgatatgaactcaataacctcgacgga +tgttcgtattctagtccagcctggaatagcctctgagcttgtgattccaagtgagcgcctgcactaccgcaa +ccaaggttggcgctccgttgagacttccggggtggctgaggaggaagccacctctggtctcgttatgctttg +catacacggttcacccgtaaattcctacactaacacaccctataccggtgcccttgggttgttggactttgc +cctcgagcttgagttccgcaaccttacccccggtaacaccaatacacgggtctcccgttattccagcactgc +tcgccaccgccttcgtcgcggtgcagacgggactgccgagctcaccaccacggctgctacccgctttatgaa +ggacctttatttta---ctagcactaat---ggtgttggtgagatcggccgtgggatagcccttaccctttt +taacctcgctgacactctgctcggtggcctgccgacagaattgatttcgtcggctggtggccagctgtttta +ctcccgccccgttgtctcagccaatggcgagccgactgttaagctgtatacatctgtggagaacgctcagca +ggataagggtattgcaatcccgcatgacattgacctcggggagtcccgtgtggttattcaggattatgataa +tcaacatgaacaagatcggccgacgccctctccagccccgtcgcgccctttctctgtccttcgagctaatga +tgtgctttggctctc-----------------------------tctcaccgctgccgagtatgac------ +cagtccacttacggttcttcgactggcccagtttatgtttctgactctgtgaccctggt---taatgtagcg +accggcgcgcaggctgttgctcggtcgctcgattggaccaaggtcacacttgatggtcgccccctttccacc +at-----ccagcagtactcgaagactttctttgtcc-tgccgctccgcggtaagctctctttctgggaggcg +ggtacaactaag--gccgggtacccctacaattataacaccactgctagtgaccaactgcttgttgagaacg +ccgccgggcac------cgggttgctat-ttctacttacaccactagcctagg--------------tgccg +gccccgttcccatttc-tgcggttgctgtcttagcccctcactctgcactggcactgcttgaggataccttg +gact---------accctgcccgtg----cccatacttttgacgacttttgcccagagtgccgccccc---t +cggcctccagggctgcgctttccagtc--------cactgtcgctgagcttcagcgcct------------- +--------taagatgaaggtgggtaaaactcgggagttatagttta-ttt------gctt----------gt +gcccccct--------tc------tttctg------tt-----------------gcttatt-t-------c +tcttttct----gcg----------------tttcgcgctccctg---------------------aaaaaa +aaaaaaa----------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH504155.1/17189/1-7189 |Hepeviridae isolate HEV_9_Brighton_UK_221214, complete genome +----------------------------------ca-catatg-------------t-----ggtcgatgc- +---catggaggcccatcagtttatcaaggctcctggcatcactactgctattgag---caggctgctctagc +agcggccaactctgccctggcgaatgctgtggtagttaggccttttctctctcaccagcagattgagatcct +tattaacctgatgcaacctcgccagcttgttttccgccccgaggttttctggaaccatcccatccagcgcgt +catccacaatgagctggagcttta---ctgccgcgccc-gctccggccgctgcattgaaattggtgcccatc +cccgctcaataaatgataatcctaatgtggttcaccgctgtttcctccgccctgtcgggcgtgatgttcagc +gctggtatactgctcccactcgcggtccggctgccaattgccgacgttccgcgctgcgcgggctccctgctg +ccgaccgcacttactgcttcgacgggttttccggctgtaactttcccgccgagacgggcatcgctctctatt +ccctccatgacatgtcaccacctgacgtcgccgaagccatgtttcgccacggtatgacgcggctttatgctg +ccctccatctc-ccacctgaggttttgctgccccctggcacttatcgcaccgcatcgtatttgctgattcat +gacggtaaacgcgttgtggtgacgtatgagggtgatactagtgctggttataaccatgatgtctccaatctg +cgctcctggattaggaccaccaaggtcaccggggaccaccccctcgttatcgagcgggttagggccattggc +tgccattttgttcttttgcttacggcggccccggagccgtcacctatgccctatgtcccttacccccggtct +accgaggtctacgttcgatcgattttcggcccgggt---------ggtaccccttccctgtttccgacctca +t----------gctccactaagtcga-ccttccacgctgtccctgcccatatctgggaccgtcttatgctgt +ttggggctaccctggacgaccaggccttttgctgctcccgtttaatgacctatctccgcggcattagctaca +aggtcactgtgggtaccctcgtggcaaatgaaggctggaacgcctccgaggatgccctcacagctgtcatca +ctgctgcctaccttactatctgccaccagcgatacctccgcacccaggctatatctaaggggatgcgtcgtc +tggagcgggagcatgcccagaagtttataacacgcctctacagctggctcttcgagaagtc---------tg +gccgtgattacatccccggccgccagttggagttctacgcccagtgtaggcgctggctctcggccggcttcc +accttgacccacgggtcctggtttttgacgagtcggccccctgc---cattgtaggactgttattcgcaa-- +----ggctttctctaagttttgctgctttatgaaatggctcggccagga------gtgcacctgttttctcc +----------------agcctgcggagggcgccgttggcgaccaaggc--------catgacaacgaggcct +acgaagggtctgatgttgaccctgctgagtccgctattagtgatatatctgggtcctatgtcgtccctggca +ctgccctccaaccgctctaccgggccctcgatctccccgctgagattgtggctcgtgcgggtcggttgactg +ctacagtaaaggtctcccaggctgatgggcggatcgattgtgagacccttcttggtaacaaaaccttccgca +cgtcatttgtcgacggtgcggtcttagagaccaacggccc------------------------agagcgct +acaatctctccttcgacgccggccagagcaccatggccgctggccctttcagtctcacctatgccgtttctg +cggccgggctggaggtgcgctatgttgct-------gccgggtttgaccaccgggcggtctttgcc---ccc +ggtgtctcaccccggtcagcccccggcgaggtcaccgccttttgttctgccctatacaggttcaatcgtgag +gcccagcgccactcactgactggtaacttatggttccatcctgaggggcttctcggcccttttgccccgttt +tcacccgggcatgtttgggagtcggctaacccattctgtggcgaaagtacactctacactcgtacttggtcg +gaggttgatgccgtttctagtccagcccggcccgacttaggttttgtgtctgagccttctatacctagtagg +gctgccac----------------------------acccac-----------cccggcggc---------- +---------ccctctaccc----ccttttgcac--------------cgggccctcccccccctccttctgc +cccgg------------------------------------------------------------------- +-------------------------------------------------------------tgc-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctgatgagctggct------tctggc +gctaccgc-----------------cgg------------------------gaccctggccataacccacc +aga----------------------------------------------cgccccggcatcgccgcc----- +-------------------tgctttttacctatccggatggttccaaggtgtttgccggctcgctgttcgag +tcgacatgtacatggctcgttaatgcgtctaatgttgaccaccgccctggcggagggctttgccatgcattc +taccagaggtaccccgcctcct------ttgatgctgcctcttttgtgatgcgcgacgg---cgcggccgca +tacacattgaccccccggccaataattcatgctgtcgcccctgattacaggttggaacataacccaaagagg +ctcgaggctgcttatcgggagacctgctcccgcctcggcaccgctgcatatccgctcctcgggactggcata +taccaggtgccgatcggccccagttttgacgcctgggagcggaatcaccgccccggggacgagttgtatctt +cctgagcttgctgccaga-------------------------------------------------tggtt +tgaggctaataagccgactcg--------------------------------------------------- +------------------------------------------cccagctctcactataactgaggatgctgc +ac------------gaacagcgaatcttgccatcgagcttg------------attcagccacagaagtcgg +ccgggcctgc---gctggctgtcgggttacccccggcgttgttcagtaccagtttaccgcaggtgtgcctgg +atccggcaagtcccgctcaatcgctcaggccgatgtggacgttgtcgtggtcccgacgcgtgagctgcgtaa +tgcctggcgccgtcgcggcttcgctgctttcaccccgcacactgccgctagagtcacccaggggcgccgggt +tgtaattgatgaggccccatccctcccccctcacctgttgctgctccacatgcagcgggccgccaccgtcca +ccttctcggcgacccgaaccagattccagccattgacttcgagcatgctgggctcgtccccgccatcaggcc +tgatttggcccctacctcctggtggcatgttacccaccgttgccctgcggatgtatgtgagttgatccgtgg +tgcataccctatgatccaaaccactagccgggttcttcgttcgctgttctggggtgag------cctgccgt +tgggcagaagctagtgttcacccaggcggctaaggccgccaaccccggctcagtgacggtccacgaggcaca +gggcgctacctatacggagaccactattattgccacggcagatgcccgaggccttattcagtcgtctcgggc +tcatgccattgttgctctaacgcgccacactgagaagtgtgtcatcatcgacgcaccaggtttgctccgcga +ggtgggcatttcggatgcaatcgttaacaatttc------------------------------ttcctcgc +tggcg--gtgaaattggccaccagcgcccatctgttatcccccgtggtaaccctgacgccaatgttgatac- +-----cctggctgccttcccgccgtcttgtcagattagtgccttccatcagttggctgaggagctcggccat +agacctgcccctgttgcagctgttttaccgccctgccccgagctcgaacagggccttctctacctgccccag +gaactcaccacctgcgatagtgttataacatttgaactaacagatattgtgcattgccgcatggccgctcca +agccagcgtaaggctgtgctgtccacactcgtgggccgctacggccgccgcacaaagctctacaatgcctct +cactctgatgttcgcgactctctcgcccgttttatcccggccattggtcccgtgcaggtcacaacttgtgaa +ttgtacgagttagtggaggccatggtcgagaagggccaggatggctccgccgtccttgagctcgacctttgc +aaccgtgatgtgtccaggatcaccttctttcagaaagactgtaacaagttcactacgggtgagaccattgcc +catggtaaggtgggccagggcatctcggcctggagcaagaccttctgcgccctctttggcccctggttccgt +gctattgagaaggctatcctcgccctgctcccccagggcgtgttttatggtgatgcctttgacgacaccgtc +ttctcggcggctgtagccgcagcaaaggcatctatg---gtgtttgagaatgacttttcggagtttgactcc +acccagaataatttctcttt------------------gggtttagagtgcgctatcatggaggagtgtggg +atgccgcagtggctcattcgcttgtatcaccttataaggtctgcgtggatcctgcaggccccgaaggagtct +ctgcgggggttttggaagaaacactccggtgagcctggcactcttctatggaacactgtttggaacatggcc +gttattacccactgttatgacttccgtgatctgcaggtggctgcctttaaaggtgatgattcgatagtactc +tgcagtgagtaccgccagagcccgggagctgctgtcctgattgccggctgtggcctaaagttgaaggtagat +ttccgcccgatcggtttgtatgcaggtgttgtggtggcccccggccttggtgcgctccctgatgttgtgcgc +ttcgccggccggcttaccgagaagaattggggtcccggccctgagcgggcggagcagctccgcctcgctgtg +agtgatttcctccgcaagcttacgaatgtagctcagatgtgtgtggatgttgtttctcgcg-------tcta +tggggtctctcctgggcttgttcataacctgattggcatgctacaggctgttgccgatggcaaggcccattt +cactgagtcagtaaagccagtgctcgacctgacaaattcgatcctgtgtcgggtggaatgaataacatgtc- +t----------------tttgctgcgcccatgggt---------tcgcgaccatgcgccctcggcctatttt +gctgttgctcctcatgtttttgcctatgctgcccgcgc---------------------------------- +-caccgc------ccggtcagccgtctggcc------------gccgtcgcgggcg-gcgcagcggcggttc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----caatcccctatattcat---- +--------------ccaaccaaccccttcgcccccgacgtcaccgctgcggccggggctggacctcgtgttc +gccaacccgcccg---------------accactcggttccgcttggcgtgaccaggccca----------- +------gcgccccgccgctgcctcacgtcgtagacctaccaca---------gctggggccgcgccgctgac +cgcggtcgccccggcccatgacaccccgccagtgcctgatgtcgactcccgcggcgctattttgcgccggca +gtataacctttcaacatcaccccttacttcttccgtggccactggcactaacctggttctttatgccgcccc +tcttagtccgctcttacctcttcaggacggcaccaatactcacataatggccacggaggcctccaattatgc +tcagtaccgggttgcccgtgccacaatccgttaccgcccgctggtccccaacgctgtcggcggttacgccat +ctccatttcattctggccacagaccaccaccaccccgacgtccgttgatatgaattcaataacctcgacgga +tgttcgcattttggtccagcccggcatagcctctgagcttgtgatcccaagcgagcgcctacactatcgtaa +ccaaggttggcgctccgtcgagacctctggggtggctgaggaggaggctacctctggtcttgttatgctttg +catacacggctcacctgtaaattcctacactaatacaccctataccggtgccctcgggctgctggactttgc +tcttgagcttgagtttcgcaaccttacccccggtaacactaacacgcgggtctcccgttattccagcactgc +tcgccaccgccttcgtcgcggtgcggacgggactgccgagctcaccaccacggctgccacccgctttatgaa +ggatctctatttta---ctagtactaat---ggtgtcggtgagatcggccgtgggatagctcttaccctgtt +taatcttgctgatactctgcttggcggcctgccgacagaattgatttcgtcggctggtggccagctgtttta +ctctcgccccgttgtctcagccaatggcgagccgactgttaagctgtatacatctgtagagaatgctcagca +ggataagggtattgcaatcccacatgacattgacctcggagaatcccgtgtggttattcaggattatgataa +tcaacatgaacaagatcggccgacgccttccccggccccatcgcgccctttctctgtccttcgagctaacga +tgtgctttggctttc-----------------------------tcttaccgctgccgagtacgac------ +cagtccacttacggctcctcgactggcccagtatatgtttctgactctgtgaccttggt---taatgttgct +accggcgcgcaggccgttgcccggtcgcttgactggaccaaggtcacacttgacggccgccccctctccacc +at-----tcagcagtactcgaaaaccttctttgtcc-tgccgctccgcggtaagctttccttctgggaggca +ggcacaactaag--gccgggtacccttataattataacaccactgccagtgaccagttgctcattgagaatg +ctgccggacac------cgggttgctat-ttccacttacactactagcctggg--------------tgctg +gccccgtctccatttc-tgcggttgccgttttagccccccactctgcgttagcactgcttgaggataccttg +gact---------accctgcccgcg----cccatacttttgatgacttctgcccagagtgccgccccc---t +cggcctccagggctgcgctttccagtc--------tactgtcgctgagcttcagcgtct------------- +--------caagatgaaggtgggtaaaactcgggagttatagttta-ttt------gctt----------gt +gcccccct--------tc------tttctg------tt-----------------gcttatt-t-------c +tttcttct----gcg----------------ttccgcgctccctg---------------------aaa--- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH504157.1/17184/1-7184 |Hepeviridae isolate HEV_7_London_UK_210614, complete genome +---------------------------------------tatg-------------t-----ggtcgatgc- +---catggaggcccatcagtttatcaaggctcctggcatcactactgctattgag---caggctgctctagc +agcggccaactctgccctggcgaatgctgtggtagttaggccttttctctctcaccagcagattgagattct +cattaacctaatgcaacctcgccagcttgttttccgccccgaggttttctggaatcatcctatccagcgtgt +catccacaacgagctggagcttta---ctgccgcgccc-gctccggccgctgcctcgagattggcgcccacc +cccgctcaataaacgataaccctaatgtggtccaccgctgcttccttcgccctgtcgggcgtgatgttcagc +gctggtatactgcccccacccgcgggccggccgctaattgccgccgttccgcgctgcgtgggctccctgctg +ctgaccgcacatactgcttcgacgggttttctggctgtagcttccccgccgagacgggcatcgccctttact +ctcttcatgatatgtcaccatccgatgttgctgaggccatgtctcgccatggtatgacgcggctttatgctg +ccctccatctt-ccgcctgaggtcctgctgccccccggcacatatcgcaccgcatcgtacttgttgattcat +gacggcaggcgcgttgtggtgacgtatgagggtgatactagcgctggttataaccacgatgtttccaacttg +cgctcctggattagaaccaccaaggttaccggagaccatcccctcgttatcgagcgggtcagggccatcggc +tgccactttgttcttttgctcacggcagccccggagccatcacctatgccttatgtcccttacccccggtct +accgaggtctatgtccgatcgatcttcggcccgggt---------ggtaccccttccttattcccaacctca +t----------gctccactaagtcga-ccttccatgctgtccctgcccatatttgggaccgtctaatgctgt +tcggggccactttggacgaccaagctttctgctgctcccgtttgatgacctatcttcgcggcattagctaca +aggtcactgttggcacccttgtggctaatgagggttggaatgcttctgaggacgccctcacagctgtcatca +ctgccgcctacctcaccatttgccaccagcggtacctccgcacccaggctatatccaaggggatgcgccgtc +tggaacgggagcatgcccagaagtttataacacgcctttacagctggctcttcgagaagtc---------cg +gccgtgattatatccctggccgtcagttggagttctacgctcagtgtaggcgctggctctcggccggctttc +atcttgatccacgggtgctggtttttgacgagtcggctccctgc---cattgtaggactgtcatccgcaa-- +----ggcgctctcgaagttttgctgctttatgaagtggctcggccagga------gtgcacctgtttccttc +----------------aacctgcagaaggcgtcgttggcgaccagggt--------catgataatgaggcct +atgaggggtccgacgttgaccctgctgagtccgccattagtgacatctctgggtcctatgtcgtccctggcg +cagccctccaaccgctttatcaggtcctcgatcttcccgctgagattgtggcccgtgcgtgccggctgaccg +ccacagtaaaggtgtcccaggtcgatgggcggatcgattgtgagacccttcttggtaacaagaccttccgta +cgtcgtttgttgatggggcggtcttagagaccaatggccc------------------------agagcgcc +ataatctctcctttgacgccagtcagagcactatggccgctggccctttcagtctcacctatgccgcctctg +cagctgggctggaggtgcgttatgtcgct-------gccgggcttgaccatcgggcgatttttgct---ccc +ggcatttcaccccggtcagcccccggcgaggtcaccgccttctgctctgccctatataggttcaaccgtgag +gcccagcgccactcgctgaccggtaacttatggttccatcctgaggggcttattggcctctttgccccgttt +tcgcccgggcatgtctgggagtcggctaatccgttttgcggggagagcacactctatacccgcacttggtcg +gaggttgatgccgtctctagtccagcccggcccgacttaggttttgtgtctgagccctctatacctagtagg +gccgccac----------------------------gcctat-----------cttggcggc---------- +---------ccctctatcc----cctcctgcat--------------cggttcctcccccccttctttttgc +cccgg------------------------------------------------------------------- +-------------------------------------------------------------cgc-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ccgatgagccggct------gccggc +accaccgc-----------------ctg------------------------ggccccggccataacccacc +aaa----------------------------------------------tggcccggcaccgccgcc----- +-------------------tgctcttcacctacccggatggctctaaggtgtttgccggctcgctgttcgag +tcgacatgcacgtggctcgtcaatgcgtctaatgttgaccaccgccctggtggtgggctctgccatgcattt +taccaaaggtaccccgcctctt------ttgatgctgcctcttttgtgatgcgcgacgg---tgcggccgcg +tatacattaaccccccggccaataattcatgctgttgcccctgattataggttggaacataacccaaagagg +cttgaggctgcttaccgggagacttgttcccgcctcggtactgctgcatacccgctcctcgggaccggcata +taccaggtgccgatcggtcccagctttgacgcctgggagcggaaccaccgccctggggatgagctgtacctt +cctgagcttgctgccaga-------------------------------------------------tggtt +tgaggccaataggccaacctg--------------------------------------------------- +------------------------------------------cccaactcttactataactgaggatgttgc +ac------------ggacagcgaacctggccatcgagcttg------------actcagccacagatgtcgg +ccgggcctgt---gctggctgtcgggttacccccggcgttgttcagtaccagtttaccgcgggtgtgcctgg +gtccggcaagtcccgctctattacccaagccgatgtggacgttgtcgtggtcccgacgcgtgagttgcgtaa +tgcttggcgccgtcgcggctttgctgctttcaccccgcacactgccgctagagtcacccaggggcgccgggt +tgtcattgatgaggccccatctctcccccctcacctgctgctgctccacatgcagcgggctgccactgtcca +ccttctcggcgacccgaaccagatcccagccattgactttgagcacgctgggctcgtccccgccatcaggcc +cgacttagcccccacctcctggtggcatgttacccaccgctgccctgcggatgtgtgtgaattgatccgtgg +tgcataccccatgatccagaccaccagccgggttctccgttcgttgttctggggtgag------cctgccgt +cgggcagaagctagtgttcacccaggcggctaaggccgccaaccccggctcagtgacggtccatgaggcgca +gggcgctacctacacggagaccactattattgccacagcagatgcccggggccttattcagtcgtctcgggc +tcatgccatcgttgctttgacgcgccacactgagaagtgcgtcatcattgacgcaccaggcctgcttcgcga +ggtgggtatctccgatgcaatcgttaataacttt------------------------------ttcctcgc +tggtg--gcgaaattggtcatcagcgcccatctgttattccccgtggcaaccctgacgccaacgttgacac- +-----tctggctgccttccccccgtcttgccagattagtgccttccaccagttggccgaggagctcggccac +aggcctgcccctgttgcagctgttctaccaccctgccccgagctcgaacagggcctcctttacctgccccag +gagctcactacctgtgacagtgtcctgacatttgaattaacagatattgtgcactgccgcatggccgccccg +agccagcgtaaggccgtgctgtccacacttgtgggccgctacggccgccgcacaaagctgtacaatgcttct +cactctgatgttcgcgactctctcgcccgtttcatcccggccattggccctgtgcaggttacaacttgtgaa +ctgtacgagctagtggaggccatggtcgagaagggtcaggatggttccgccgtccttgagcttgacctttgc +aatcgtgacgtgtccaggatcacctttttccagaaagactgtaataaattcaccacaggtgaaaccattgcc +catggtaaagtgggccagggcatctcggcctggagcaagaccttctgcgccctttttggcccttggttccgc +gctattgagaaggctattctggccttgctccctcagggtgtgttctatggtgatgcctttgatgacaccgtc +ttctcggcggctgtggccgcagcaaaggcatctatg---gtgtttgagaatgatttttctgagtttgactcc +acccagaataatttctctct------------------gggcctagagtgcgctataatggaggagtgtggg +atgccgcagtggctcatccgcctgtatcatcttataaggtccgcgtggatcctgcaggctccgaaggagtct +ctgcgagggttttggaagaaacactccggtgagcccggcactcttctatggaatactgtctggaacatggcc +gttatcacccactgctatgacttccgcgatttgcaggtggctgcctttaaaggtgatgattcgattgtgctt +tgcagtgagtaccgtcagagcccaggagctgctgtcctgatcgccggctgtggcttgaagttgaaggtggat +ttccgcccgatcggtctgtatgcaggtgttgtggtggcccccggtcttggcgcgcttcctgatgttgtgcgc +ttcgccggccggcttactgagaagaattggggccccggccctgagcgggcggagcagctccgcctcgctgtt +agtgatttcctccgcaagctcacgaatgtcgctcagatgtgtgtggatgttgtttcccgtg-------ttta +cggggtttcccctgggctcgttcataacctgattggtatgctacagtctgtcgctgacggcaaggcacattt +cactgagtcagtaaaaccagtgctcgacctgacaaactcaattttgtgtcgggtagaatgaataacatgtc- +t----------------tttgctgcgcccatgggt---------tcgcgaccatgcgccctcggcctatttt +gctgctgttcctcatgtttctgcctatgctgcccgcgc---------------------------------- +-caccgc------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggttc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----caatcccctatattcat---- +--------------ccaaccaaccccttcgcccccgatgtcaccgctgcagccggggctggacctcgtgttc +gccaacccgcccg---------------accactcggctccgcttggcgtgaccaggccca----------- +------gcgccccgccgctgcctcacgtcgtagacctaccaca---------gctggggccgcgccgctaac +tgcggtcgctccggcccatgataccccgccggtgcctgatgtcgactcccgcggtgccattctacgccggca +gtacaacctatcaacatctccccttacctcttccgtggccaccggcactaatttggttctttatgccgcccc +tctcagtccgcttttaccccttcaggacggtactaatactcacataatggccacggaggcatctaattatgc +ccagtatcgggttgcccgtgccacgatccgttaccgcccgttggttccaaatgctgttggcggttacgccat +ttccatctcgttttggccacagaccaccaccaccccgacgtccgttgatatgaattcaataacctcgacgga +tgttcgtattttagtccagcccggcatagcctctgagcttgtgatcccaagcgagcgcctgcactaccgtaa +ccaaggttggcgctccgttgaaacctccggggtggctgaggaggaggccacctctggtcttgttatgctctg +catacatggctcacccgtaaattcctataccaatacaccctacaccggcgcccttgggctgctggactttgc +ccttgagcttgagttccgcaaccttacccccggtaacactaatacgcgggtctcccgttattccagcactgc +tcgccaccgccttcgtcgcggtgcggatgggactgccgagctcaccaccacagctgctacccgctttatgaa +ggacctctatttca---ctagtactaat---ggtgtcggtgagatcggccgcgggatagccctcaccctgtt +caaccttgctgatacattgcttggcggcctgccgacagaattgatttcgtcggctggcggccagctgttcta +ctctcgtcccgtcgtctcagccaatggcgagccgactgttaagctctatacatctgtagagaatgctcagca +ggataagggtatcgcaatcccgcatgatattgacctcggagagtctcgtgtggttattcaggattatgataa +ccaacatgaacaggaccggccgacgccctccccagccccttcgcgccctttctctgttcttcgggctaatga +tgtgctttggctctc-----------------------------tctcaccgctgccgagtatgac------ +cagtccacctatggctcttcgaccggcccagtctatgtctctgactctgtgaccttggt---taatgttgcg +accggcgcgcaggccgttgcccggtcgctcgactggaccaaggtcacacttgacggccgccctctctccacc +at-----ccagcagtactcgaagaccttctttgttc-tgccgctccgcggcaagctctctttttgggaggcg +ggcacgactaag--gccgggtacccttataattacaacaccactgcgagcgaccaactgcttgtcgagaatg +ccgctgggcat------cgggttgctat-ctctacttacaccactagcctggg--------------tgctg +gccctgtctctatttc-tgcggttgccgtcttagcccctcactctgcactagcattactcgaggacaccttg +gatt---------accctgcccgcg----cccatacttttgatgatttttgcccggagtgccgccccc---t +tggcctccagggctgcgctttccagtc--------tactgttgctgagctccagcgcct------------- +--------taagatgaaggtgggtaaaactcgggagttatagttta-ttt------gctt----------gt +gcccccct--------tc------tctcta------tt-----------------gcttatt-t-------c +tcttttct----gcg----------------tttcgcgctccctg---------------------aa---- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH504162.1/17210/1-7210 |Hepeviridae isolate HEV_2_Aylesbury_UK_240314, complete genome +---------------------------------cca-catatg-------------t-----ggtcggtgc- +---catggaggcccatcagtttatcaaggctcctggcatcactactgctattgag---caggctgctctagc +agcggccaactctgccctggcgaatgccgtggtagttaggccttttctctctcaccagcagattgagatcct +tattaacctaatgcaacctcgccagcttgttttccgccccgaggttttctggaatcaccctatccagcgtgt +catccataatgagctggagcttta---ctgccgcgccc-gctccggccgctgccttgaaattggcgcccacc +cccgctcaataaatgataaccctaatgtggtccaccgctgcttcctccgccctgttgggcgtgacattcagc +gttggtatactgcacccacccgcgggccggctgctaattgccggcgttccgcgctgcgcgggctccctgctg +ccgaccgcacctactgcttcgacgggttttctggctgtaactttcccgccgagacgggcatcgccctctatt +ccctccatgatatgtcaccatctgacgtcgccgaggccatgtctcgccatggtatgacgcggctttatgccg +ccctccatctt-ccgcccgaggtcctgctgcctcctggcacataccgcaccgcttcgtatttgctgattcat +gacggcaggcgcgttgtggtgacgtatgagggtgacactagtgctggttacaaccacgatgtctccaacctg +cgctcttggattagaaccaccaaggtcactggagaccacccccttgttatcgagcgggtcagggccataggc +tgccactttgtcctcttgcttacggcggccccggagccatcacctatgccttatgtcccttacccccggtct +accgaagtctatgttcgatcgattttcggcccgggt---------ggtactccatccttatttccaacctca +t----------gctcgactaagtcca-ccttccacgccgtccctacccacatttgggaccgtcttatgttgt +tcggggccaccctggacgaccaagccttttgctgctcccgtttaatgacctatcttcgcggcattagctaca +aggttactgtgggtacccttgtggctaacgaaggctggaacgcctctgaggacgccctcacagctgtcatca +ccgccgcctaccttaccatttgtcaccagcggtaccttcgcacccaagctatatctaaagggatgcgtcgcc +tggaacgggagcatgcccagaagtttataacacgtctctacagctggctctttgagaagtc---------cg +gccgtgattacatccccggccgtcagttggagttttacgcccagtgtaggcgctggctttcggccggcttcc +atcttgacccacgggtgttggtcttcgacgagtcggccccctgc---cattgcaggaccgcgatccgtaa-- +----ggctctctcaaagttctgctgctttatgaagtggcttggtcagga------gtgtacttgtttccttc +----------------agcctgcagaaggtgttgttggcgaccggggc--------cacgataatgaggcct +atgaggggtccgatgttgaccccgctgagtccgccatcagtgatatatctgggtcctatgtcgtccttggca +cagccctccaacctctttaccaggccctcgacctccccgctgagattgtagctcgtgcgggtcggctgaccg +ccacagtaaaggtctcccagaccgatgggcggatcgattgtgagacccttcttggtaacaaaacctttcgca +cgtcattcgttgacggggcggtcttagagaccaatggccc------------------------ggagcgcc +ataatctctcttttgatgtcagtcagagcactatggctgctggccctatcagtctcacctatgccgccactg +cagctgggctggaggtgcgttatgttgct-------gccgggcttgaccaccgggcggtttttgct---ccc +ggagtttcaccccggtcagcccctggcgaggtcaccgccttttgctctgccctatacaggttcaatcgtgag +gctcagcgccactcgctgaccggtaatctatggttccatcctgaagggctccttggcctcttcgccccgttt +tcacccgggcatgtctgggagtcggctaatccattctgtggcgagagcacactatatactcgcacttggtcg +gaggttgacgccgtctctagtccggcccggcctgatttgggttttatgtctgagccctctatacctagtagg +gccgccac----------------------------acctac-----------ctttgcggc---------- +---------ccccctacct----tcctctgcgc--------------cggacccatccccctccccctctgc +cctgg------------------------------------------------------------------- +-------------------------------------------------------------cgc-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ccgatgagccggcc------tccggc +actaccgt-----------------cgg------------------------ggccccggccataacccacc +aga----------------------------------------------cggtccggcaccgccgcc----- +-------------------tgctctttacctacccggatggctctaaggtatttgccggctcgctgttcgag +tcgacatgtacgtggcttgtcaacgcgtctaatgttgaccaccgtcccggcggcgggctttgccatgcattt +taccaaaggtaccccgcctcct------ttgatgccgcctcttttgtgatgcgcgacgg---cgcggccgcg +tacacattaacccctcggccaataattcatgctgtcgcccctgattataggttggaacataacccaaagagg +cttgaggctgcttatcgggagacttgctcccgcctcggcaccgctgcatacccgctcctcgggaccggcata +taccaggtgccggtcggccccagttttgacgcctgggagcggaatcaccgccccggggatgagttgtacctc +cctgagcttgctgccaga-------------------------------------------------tggtt +tgaggccaatcggccgacccg--------------------------------------------------- +------------------------------------------cccaactctcactataaccgaggatgctgc +ac------------ggacagcgaacctggccattgagttgg------------actcagccacagatgtcgg +ccgggcctgt---gccggctgccgagtcaccccgggcgttgttcagtaccagtttactgctggtgtgcccgg +atccggcaagtcccgctctatcactcaagccgatgtggacgttgtcgtggtcccgacgcgcgagttgcgcaa +tgcctggcgccgccgcggctttgctgctttcactccgcacacagccgctagagtcacccaggggcgccgggt +tgtcattgatgaggctccgtctctcccccctcacctgctgctgctccacatgcagcgagccgccactgtcca +tctccttggcgacccgaaccagatcccagccatcgattttgagcacgctgggcttgtccccgccatcaggcc +cgacttagcccctacctcctggtggcatgttacccatcgctgccctgcggatgtatgtgagttgatccgtgg +tgcataccccatgatccagaccactagccgggtctttcgttcgctattctggggcgag------cctgctat +tgggcagaaactagtgttcacccaggcggctaaggccgccaaccccggctcagtgacagtccacgaggcaca +gggcgctacctatacggagaccaccattattgccacggcagatgcccgaggccttattcagtcgtcccgggc +ccatgccatcgtcgctctgacgcgccacactgagaagtgtgttatcattgacgcaccgggcctgcttcgtga +ggtgggcatctccgatgcaatcgtcaataacttt------------------------------ttcctcgc +cggtg--gcgaaattggtcaccagcgcccatctgttattccccgcggcaatcctgatgccaatgttgacac- +-----cctggctgcttttccaccgtcttgccagattagtgcctttcaccagctggctgaggagcttggtcac +agacctgcccctgttgcagctgttttaccaccctgccccgagcttgaacagggcctcctctacctgccccag +gaactcactacctgtgatagtgttgtgacatttgaattaacagatattgtgcactgccgcatggccgctccg +agccagcgcaaggctgtgctgtccacactcgtgggccgctacggccgtcgcacaaaactatacaatgcctcc +cactctgatgttcgtgactctcttgcccgttttatccctgccattggccccgtacaggttacaacctgtgaa +ttgtacgagctagttgaggccatggtcgagaagggccaggatggctctgccgtccttgagctcgacctttgt +agccgtgacgtgtccaggatcacctttttccagaaagattgtaataagttcaccacgggcgagaccattgcc +catggtaaagtgggccagggcatttcggcctggagtaagaccttttgcgccctcttcggcccttggttccgc +gctatcgagaaggccattctggccctgctccctcagggtgtgttttacggtgatgcctatgatgacaccgtc +ttctcggcggctgtggctgcagcaaaggcatccatg---gtgttcgagaatgacttttctgagtttgactcc +acccagaataatttctctct------------------aggcctagagtgtgctattatggaggagtgcggg +atgccacagtggctcattcgtttgtatcaccttataaggtctgcgtggatcctgcaggccccgaaggagtct +ctgcgagggttttggaagaaacactccggtgaacccggcactcttctatggaatactgtctggaatatggcc +gttattacccactgctatgatttccgcgatttgcaggtggctgccttcaaaggtgatgattcgatagtgctt +tgcagtgaataccgtcagagcccgggggccgctgtcctgatcgccggctgtggcttaaagttgaaggtagat +tttcgcccgattggtttgtatgcaggtgttgtggtggcccctggcctcggcgcgctccccgatgttgtgcgc +ttcgccggccggcttaccgagaagaattggggccctggccctgagcgggcggagcagctccgcctcgctgtg +agtgattttctccgcaagcttacgaatgtagcacagatgtgtgtggatgttgtttcccgtg-------ttta +cggggtctcccccgggctcgttcataacctgattggcatgctacaggctgttgctgatggcaaggcccattt +tactgagtcagtaaagccagtgcttgacctgacaaattcaattttgtgtcgggtggaatgaataacatgtc- +t----------------tttgctgcgcccatgggt---------tcgcgaccatgcgccctcggcctatttt +gttgctgctcctcatgtttttgcctatgctgcccgcgc---------------------------------- +-caccgc------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggttc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----caatcccctatattcat---- +--------------ccaaccaaccccttcgcccccgatgtcaccgctgcggccggggctggacctcgtgttc +gccaaccagcccg---------------accactcggctccgcttggcgtgaccaggccca----------- +------gcgccccgccgctgcctcacgtcgtagacctaccgca---------gctggggccgcgccgttaac +tgcggtcgccccggcccatgacaccccgccggtgcctgatgttgactctcgcggcgccatcctgcgccgtca +gtataacctatcaacatctcccctcacctcttccgtggccaccggcactaatctggttctttatgccgcccc +tcttagtccactcttacccctccaggacggcaccaatactcatataatggccactgaggcctccaattatgc +ccagtatcgggtcgcccgtgccacaatccgttaccgcccgctggtcccaaatgctgttggcggttatgccat +ttccatctcattctggccgcagaccaccaccaccccgacgtccgtcgacatgaattcaataacttcgacgga +tgttcgtattttagtccagcccggcatagcctctgagcttgtgattccaagtgagcgcctacattatcgtaa +tcaaggttggcgctccgtcgagacctcgggggtggctgaggaggaggccacctctggtctcgttatgctctg +catacacggttcacccgtaaattcctacactaacacaccctataccggtgccctcgggctgttggacttcgc +cctcgagcttgagttccgcaacctcacccccggtaacaccaacacgcgggtctcccgttattccagcactgc +tcgccaccgccttcgccgcggtgcagacgggactgccgagctcactaccacggctgctacccgctttatgaa +ggacctttatttta---ctaacactaat---ggtgttggtgagatcggccgcgggatagcccttaccctttt +caacctcgctgacactctgcttggtggcctgccgacagaattgatttcgtcggctggtggccagctgtttta +ctcccgccccgttgtctcagccaatggcgagccgactgttaagctgtatacatctgtggagaatgctcagca +ggataagggtattgcaatcccgcatgacattgacctcggagaatctcgtgtggttattcaggattatgataa +tcaacatgaacaagaccggccgacgccttctccagccccgtcgcgccctttctctgtcctccgagctaatga +tgtgctttggctctc-----------------------------tctcaccgctgccgagtatgac------ +cagtccacttacggctcttcgactggcccggtttatgtttctgactctgtgaccctggt---taatgttgcg +accggtgcgcaggccgttgctcggtcgctcgattggaccaaagttacacttgatggtcgccccctctccacc +at-----ccagcagtactcgaagactttctttgtcc-tgccgctccgcggtaagctttctttctgggaggca +ggtacaactaag--gccgggtatccctacaattacaacaccactgctagtgaccaattgctcgttgagaatg +ccgccgggcac------cgggttgctat-ttctacttacaccactagcctagg--------------tgccg +gtcccgtttccatctc-tgcggttgctgttttggccccccactctgcactagcactgcttgaggataccttg +gact---------accctgcccgcg----cccatacttttgatgatttttgcccagagtgccgccccc---t +cggcctccagggctgcgctttccagtc--------cactgtcgctgagcttcagcgcct------------- +--------taagatgaaggtgggtaaaactcgggagttatagttta-ttt------gctt----------gt +gcccccct--------tc------tttctg------tt-----------------gcttatt-t-------c +tcttttct----gcg----------------tttcgcgctccctg---------------------aaaaga +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444028.1/17227/1-7227 |Hepeviridae isolate XTLSEDU1, complete genome +-----------------------------------------------------------------cgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttctatctcgtgtccaaactgatatcct +tattcacttgatgcaacctcggcagcttgtgttccgacctgaagtcctctggaaccacccgatccagcgagt +tatacataatgagctggagcaata---ctgccgggccc-gcgccggccgctgtcttgaggtgggcgctcacc +caagatctattaatgataaccccaatgttctgcaccggtgcttcctccgcccggtcggaagagacgtccagc +gttggtactctgcccccactcgtggcccagcggctaactgccgccgctctgcgctacgtggtttgccccctg +tcgatcgcacatactgcttcgacgggttttcccgctgcgcttttgccgcagagaccgggattgctctgtact +cactgcatgatctttggccctcggacgttgcggaggctatggcccgccacgggatgacgcgtttgtacgctg +cccttcattta-ccccctgaggtcctgttaccacctgggacttaccacacaacctcctatcttctgattcac +gacggcaatcgcgccgtcgtaacttatgagggtgataccagtgcgggctataaccatgatgtgtctatactc +cgcgcatggatccgcaccactaaaatagttggtgaccacccactggtaatagagagggtccgcgccatcggc +tgccattttgttttacttcttaccgcagcccctgagccatccccaatgccttatgttccgtaccctcgctca +acagaggtgtacgttagatccatattcggccctggt---------gggtcgccttctcttttcccatcagcc +t----------gctctactaaatcta-cattccatgccgtcccggttcatatctgggaccggcttatgcttt +ttggtgccactctagatgatcaggccttctgctgctcgcggcttatgacctacctccgcggaattagctata +aagtaactgttggcgcacttgtcgccaacgagggctggaatgcctcggaggatgcgcttaccgccgtgatca +ccgcagcgtacctgaccatctgccatcagcgctacctacgaacacaggccatctccaaaggcatgcgtcggc +tggaggttgagcacgcccaaaaatttatcacaaggttatacagctggctgtttgaaaagtc---------ag +gtcgtgattatatccccggtcgccagctcgagttttacgcacagtgccgccgttggctctcagctggttttc +atctagaccctagggttcttgtctttgacgaggcggtcccctgc---cgctgccggagctttttaaagaa-- +----agtcgccgggagattctgctgctttatgaaatggttggggcagga------gtgcacctgttttctgg +----------------agccagcggaaggcctggttggtgactgtggc--------catgataatgaggctt +atgaggggtccgaggtggaccccgccgagcctgctcaccctgatgtttctgggacctatgcggtccatggcc +gacagcttgaggctctatatagagcgcttaatatcccggatgatattgcggcccgtgcgtcacgcctgacag +ctactgtggaacttgtcgccagcccaggccgactcgagtgccggacagtacttgggaataagacctttcgta +catcaatagttgatggtgcccacctcgaagccaacggacc------------------------cgagcagt +acgtcttgacatttgatgattcccgccaggcaatgggagccgggccccataacctcacgtatgaacttgtcc +ctgccggtttgcaggttaaaatatcttct-------aatggcttagattgtaccgccatattcccc---cct +ggtgcggcgccaagtgctgcaccaagtgaagtggcggctttttgcagcgccctatataggtacaataagttt +acccagcgccattcgctgaccggtgggctgtggctgtaccctgaagggcttcttggcttgttcccccctttc +tctccggggcacctttgggagtctgcaaaccccttctgcggtgagagcacactttatacacgaacttggtct +acatcaggtttctctagcgacttttccccgcccgaggcagctcatgccgccccagtccctgacgt----cgg +gttaccttcgggtgccccctcgtctgctagtgatgt-----------------ttgggtgtt---------- +---------cccaccgccc----tctgaggggt--------------cggcgatcgttccaccacccgaaac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtaagccagctaacccgccttgt +tctattacacctaga-------------------------------------ccccccgttcgtaagccacc +tacaccacc--------------------------------------accggctcgcacccgtcggc----- +-------------------tcctttatatgtatcccgatggggccaaggtatatgcaggctctctgttcgag +tcggattgtgactggctggtcaatgcatctaaccccggccaccgtcctggcggtggtctttgtcatgcattt +tatcagcgtttcccggagtcat------tccatccgactgattttgtcatgcgtgaggg---tcttgccgcg +tacactttgagcccgcgcccgatcatccatgctgtggcccccgactatagggttgaacagaaccccaagagg +ctggaggcggcatatcgtgagacctgttcccgcctcggcacagctgcctacccgctactggggtcggggatt +taccaggtgcctgtaggcttaagtttcgacgcctgggagcgtaatcaccgccctggcgatgaactttacctt +actgagccggctgccgcc-------------------------------------------------tggtt +tgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------accagccttaacaattactgaagacactgc +cc------------gtacagccaaccttgcgctcgagatgg------------actctgctaccgaggttgg +tcgcgcttgc---gccggctgcactattaaccccgggattgttcattaccagtttaccgccggggttcctgg +ctccgggaagtctaggtctatacaacagggggatgttgatgtagtagttgtgccaactcgtgagcttcgtaa +cagttggcgacgccgcggctttgctgcttttacaccccacacagcagctcgtgtcaccgccggtcggcgtgt +ggtgatagatgaggcaccctcgcttccaccgcatttgctgttgctccatatgcagcgggcctcatcggttca +cctccttggcgaccccaaccatatccctgctatcgactttgagcatgccggtttagtcccggcgatccgccc +tgagcttacccctactagttggtggcacgttacccaccgttgccccgctgatgtgtgtgaactcatacgtgg +ggcttacccaaagattcagacgaccagccgtgtgttgcggtctttattctggaatgag------cctgcggt +aggccataggctagttttcacgcaggcagccaaggcggctaaccccggtgtaatcaccgttcatgaggccca +gggcgccacgttcacggagaccaccatcatagccacagccgatgccagaggtcttattcagtcttcccgtgc +gcatgccatcgttgcacttacccgtcatacagaaaaatgcgtcattcttgatgcccccggtttactgcgtga +ggtcggcatttctgatataattgttaataacttt------------------------------ttcctggc +tggkg--kwgaagggggtcatcatcgcccctcttccataacccgcggcaatccagaccagaacttagacac- +-----cctgcgagctttccccccgtcctgccaaattagtacctaccatcagctggctgaggagctgggccat +cggccggccccagtggccgccgtcctgcccccatgccctgagcttgagcaggggctactatacatgccgcag +gagcttacggtgtgtgacagcgtcataattttcgaacttacggacatagttcactgccgcatggctgccccc +agtcaacgtaaggcggtcctttcgacactcgttggtaggtacggccgccgaacgaagttgcacgaagcggcc +cactctgatgttcgcgagtctttagggcggttcatccccactatcggaccggtccaggccaccacgtgcgag +ctatatgagctggttgaggctatggtggagaagggccaggacggctctgccgtgctcgagcttgatctctgc +agccgtgacgtctcgcgtattacattcttccagaatgattgtaataaatttacaacaggtgagaccattgcc +cacggcaaggtgggccagggcatctcggcttggagtaagaccttctgtgctttattcggcccgtggttccgt +gccattgagaaggagattctggctttgcttccacccaatattttctatggcgatgcctatgaggagacagtg +ttttctgcagctatctctggggccggctccagtatg---gttttcgaaaacgatttctctgagtttgatagt +acccaaaataatttttctct------------------tggccttgagtgtgttattatggaggagtgtggc +atgccccagtggctaatccgactgtaccatctggttaggtcagcctggaccttgcaagccccgaaagagtct +ttgaaaggtttttggaagaagcattctggcgagcccggtactctcctctggaacactgtctggaacatggcg +attatagcacactgctacgagttccgtgatttgagagtggcagcgttcaaaggggatgattcagtggttctt +tgcagtgattaccgccagagccgcaatgcggccactctgatagctggttgcggattgaaactgaaggttgat +tatcggcctataggtctgtatgccggcgttgtagtggctccgggcctcggggcacttcccgatgttgtccgg +tttgccggtcgattatctgagaagaactggggcccgggtcctgagcgcgccgaacagttgcgcctagcggtt +tgtgattttcttcgaaggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgcg-------tcta +tggggttagccctgggctggtgcataaccttattggtatgctacaaactattgctgatggaaaggctcactt +tactgagaccgttaagcctgtgctggatcttacaaattctatcatacagaggttggaatgaataacatgtt- +c----------------tgtgcatcgcccatggg------------atcgccatgtgccctagggctgttct +gctgctgttcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcatatcacaatccggggctggagctcgccctc +gacagccggyccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------gctggggctgcgccgttaac +tgctgtttcaccggcgcctgatacggccccagttcctgatgttgattctcgtggtgctattttrcgtcgcca +gtataatctgtccacctcccctttaacctcatctgttgcttctggaactaatcttgtcttgtatgctgcccc +gcttaatccccttctacctctccaagatggcactaatactcacatcatggcgactgaagcgtctaattatgc +tcagtaccgggttgtccgcgccacaatccgctatcgccctttggtgccgaatgccgtcggtggttatgcaat +ctctatttctttctggcctcagactacaactacacccacctctgttgatatgaactctattacttccactga +tgttaggattttagtccagcctggtatagcctctgagctggtcatcccgagtgagcgccttcactaccgtaa +tcagggttggcgctctgttgagacatcgggtgtggctgaggaggaggcaacatcaggtttggtcatgctttg +tattcatggttcccctgttaattcctataccaatacgccctatactggggcattggggctcctcgactttgc +acttgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgctatactagcacagc +ccgacaccgtctgcgccgtggcgccgatggtacagccgagctcacaaccaccgctgccacacgttttatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggcgaggtaggccgtggtatagccctaacgctatt +taatcttgctgatacacttctcggtgggctgccgacagaattgatttcgtcggctggaggtcaactgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagctatacacctctgtcgagaatgcacagca +ggacaagggcatcgctataccacacgatatagacttaggggactcccgagtagttatacaagactatgacaa +ccaacatgagcaggaccggcctaccccgtcgccggccccgtcccgtcctttttcagtccttcgagctaatga +tgttttgtggctctc-----------------------------tctgaccgcggctgaatatgac------ +caaactacttatggctcgtcgaccaaccctatgtatgtctcagatactgttacatttgt---taatgtggcg +acaggtgcccaggccgtcgcccgttcccttgattggtccaaggtcactttggacggccggccactcaccacc +at-----ccagcagtactccaagacattctatgtgc-tgccgcttcgtggcaagctttccttttgggaagct +ggtacgactaag--gctggttacccttataattacaatactactgctagtgaccagattttgattgagaatg +ctgctggtcac------cgtgttgccat-atctacttatactactagtcttgg--------------tgccg +gccctgtgtctgtttc-tgcagtgggtgttcttgctccgcactctgccttagctgtacttgaggacactatc +gact---------accccgcccgtg----cccacactttcgatgatttctgccctgagtgccgtaatc---t +cggcctgcagggttgcgctttccagtc--------cactgttgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagttctaattaa--tt---tc-ccc--tt-------gt +gccc-cct--------tc-taga-ct-tt----gc-tt-tgt----------------tatt-t-------c +ttttttct----gcg----------------ttcctcgctccccg---------------------gaaaaa +aaaaaaa---------------aaaaa--------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444029.1/17227/1-7227 |Hepeviridae isolate XTLSECOE, complete genome +------------------------------------------g-------------k-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactaccgccatcgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggtccggccgtttttatctcgtgttcaaactgatattct +tattcacctgatgcaaccccggcagcttgtgttccgacccgaagttctctggaaccacccgatccagcgggt +tatacataatgagctggaacaata---ctgccgagccc-gcgctggccgctgtcttgaggtaggcgctcacc +cgagatccattaacgataaccccaatgttctgcatcggtgctttctccgtccggttggaagagacgtccagc +gctggtactctgctcccacccgtggtccagcggctaactgccgccgttctgcgctacgtggcttgccccctg +tcgaccgcacatattgcttcgacgggttctcccgctgcgcctttgccgctgagactgggatcgctttatatt +cactgcatgacctttggccctcggacgttgcagaggctatggcccgccacgggatgacgcgcttgtatgctg +ccctccatcta-ccccctgaggttctgttaccacctggcacttaccacacaacctcctatcttctgattcat +gacggcaatcgtgccgtcgtgacttatgagggggataccagtgcgggctacaaccatgatgtgtccatactt +cgtgcatggattcgcaccactaaaatagttggtgaccacccactggtaatagagagggtccgtgccattggc +tgccattttgtcctacttcttactgcagcccccgagccatccccgatgccttatgttccataccctcgttca +acagaggtctatgttaggtccatatttggtcctggc---------gggtcgccttctctttttccatcagcc +t----------gctctaccaaatcta-cattccatgccgttcccgttcatatctgggaccgacttatgcttt +ttggtgccactctagacgatcaggccttttgctgctcgcggctcatgacttacctccgcgggatcagctata +aagtgaccgttggcgcacttgttgccaacgagggctggaatgcctcggaagatgcgcttactgctgtgatta +ccgcagcgtatttgactatctgtcatcagcgctacttacggactcaggccatctccaaaggcatgcgtcggc +tagaggttgagcatgctcagaagtttattacgaggttatacagctggttgtttgaaaagtc---------ag +gccgtgactacattcctggccgccagcttcagttttatgcacagtgccgccgttggctctcagctggttttc +atctggaccctagagtccttgtcttcgatgaggcagtcccttgc---cgctgccggagcttcttaaagaa-- +----ggttgccggaaaattttgttgttttatgaaatggttggggcagga------gtgtacctgcttcctgg +----------------agccagcggaaggcttggttggtgattgtggc--------catgataatgaggcct +atgaggggtctgaggtggaccctgccgagcccgctcaccttgacgtttctgggacttacgcggtccatggcc +gtcagcttgaggctttatatagagcgcttaatatcccagatgacattgcggctcgtgcgtcacgcctgactg +ccactgtggaacttgctaccagcccgggccgactcgagtgtcgtacggtgcttgggaacaagaccttccgca +catcaataactgatggtgctcacctcgaagccaacggccc------------------------cgagcagt +acgtcttgacatttgatgattctcgccaggcaatgggggctgggccccacagcctcacgtatgaacttgtcc +ccgccggtctgcaggttaaaatatcttct-------aatggtttagactgtaccgctatatttccc---cct +ggtggggcgccaagcgctgcaccaggtgaagtggcggctttttgcagcgccctatacaggtacaataggttc +acccagcgccattcgctgaccggtgggctgtggctgcaccctgaggggcttcttggcctgtttccccctttc +tccccaggacatgtttgggagtctgcaaaccccttttgcggtgagagcacactttatacacggacttggtct +acatctggtttttctagtgatttctccccgcccgaggtggctcacgctgccccagttcctgccgt----agg +gccactctcgggcaccccttcgtctgctagtgatgt-----------------ctgggtgtt---------- +---------cccaccgccc----tctgaggggt--------------cggcgatcgtcccgccacccgagac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtaagccagctaacttgcctagc +cccactccgcctggg-------------------------------------ccccccgcccgtaagccacc +tacaccacc--------------------------------------gccggctcgcacccgccggc----- +-------------------tcctttacacatatcctgatggggccaaggtgtatgcaggttctctgtttgag +tctgactgtgattggctggttaatgcatctaaccccggccaccgtcctggcggtggtctctgccatgcgttt +tatcagcgcttcccggagtcgt------tccacccaactgattttgtcatgcgtgaggg---cctcgccgca +tacactttgagcccgcgcccgattatccatgcagtggcccccgattacagggttgagcagaaccccaagagg +ctagaggcggcatatcgtgagacctgctcccgcctcggtacagctgcctacccgctactggggtcggggatc +taccaggtgcccgtaggcctaagcttcgacgcctgggagcgtaaccaccgcccaggcgatgaactttacctt +actgagccagctgccgcc-------------------------------------------------tggtt +tgaggctaataagccaactca--------------------------------------------------- +------------------------------------------gccggccctaacaatcactgaggacactgc +cc------------gcacagccaaccttgcccttgcgattg------------attccgctactgaggtggg +tcgtgcttgc---gctggctgtaccattaaccccgggattgtccattaccagttcaccgccggggtccctgg +ctccgggaagtctaggtctatacagcagggggacgttgatgttgtagtcgtgccaactcgtgagctccgcaa +cagttggcgacgccgcggctttgctgctttcacaccccacacagcagcccgtgttactgccggtcggcgtgt +ggtgatagacgaggcgccttcgcttccgccgcacttgctgctgctccatatgcagcgagcctcatcggtcca +tcttcttggcgaccctaaccagatccccgccattgattttgagcatgccggtttagtcccggcaattcgccc +cgaacttgcccctactagctggtggcatgttacccatcgctgtcccgctgatgtgtgcgagctcatacgcgg +ggcctatccgaagattcagacgaccagccgtgtgctgcgatctctattttggaatgag------cctgcggt +gggtcagaggctagtttttacgcaggcagccaaggcggccaaccccggcgcaatcaccgtccatgaggccca +gggcgccacattcacggaaaccaccatcatagccacggccgatgctagaggtcttattcagtcctcccgtgc +gcatgccatcgtagcactcactcgccatacagaaaagtgcgtcattcttgacgcccccggcctactgcgtga +ggtcggcatttctgatataattgttaacaacttt------------------------------ttcctggc +tggag--gtgaagtgggccaccaccgcccctctactataccccgcggcaacccggaccagaacttagacat- +-----cctacgagcgtttcctccgtcctgccaaattagtgcctatcaccagctggctgaggagctgggccac +cggccagccccggtggccgccgtcctgcccccctgccccgagcttgagcaggggttactttatatgccgcag +gagcttacggtgtccgatagcgtcttaatttttgagctcacagacatagttcactgccgtatggctgcccca +agccaacgtaaggcggtcctctcgacgctcgtcggcaggtacggccgccgaacgaagctgtatgaagcggcc +cattctgatgttcgcgagtctctagggagattcatccctgccatcggaccggttcgggccaccacatgcgag +ctatatgagctggttgaggctatggtagagaagggccaggatggctccgccgtgctcgagctcgacctctgc +agccgtgatgtctcgcgtattacatttttccagaaggactgtaataaatttacaacaggtgagaccattgcc +cacggcaaggtgggccagggcatctcggcttggagtaagaccttttgtgctctatttggcccgtggttccgt +gctatcgagaaggagattttagctctgcttccacccaatattttttatggtgatgcctatgaggagtcagtg +ttttctgcagccatctctggggctggctccagtatg---gtttttgagaacgatttttctgagtttgatagc +acccaaaacaatttttctct------------------tggccttgagtgtgttattatggaggagtgtggt +atgccccagtggcttatccgactatatcatttggttaggtcagcctggaccctgcaagccccgaaagagtct +ttgaaaggtttctggaagaagcactctggcgagcccggtaccctcctctggaataccgtttggaacatggcg +atcatagcacactgttatgaattccgtgatctgagagtagcggcgtttaagggggatgattcagtggttctt +tgcagtgattaccgccagagccgtaatgcggccactctgatagccggttgtgggttgaaactgaaggttgat +tacaggcctataggcttgtatgccggtgttgtagtggccccgggcctcggggcacttcctgatgttgtccgg +tttgccggtcgattatctgagaagaactggggcccgggccccgagcgcgccgaacagttacgtctagcagtt +tgtgatttccttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtctcgtg-------tcta +tggggttagccccgggctagtacataaccttattggtatgctacagactattgctgatggaaaggcccattt +tactgagactgttaagcctgtacttgatctcacaaattctatcatacagaggttggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgccatgtgccctagggctgttct +gttgctgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccaccgacgtcgtatcacaatccggggctggagctcgctctc +gacagccggcccg---------------cccccttggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtctcaccagcgcctgatactgccccagttcctgatgttgattctcgtggcgctattctgcgccgcca +gtataatctgtctacttctcctttaacctcgtctgttgcttctggaactaatcttgttttgtatgccgcccc +gctcaacccccttctgcctctccaggacggcaccaatactcacatcatggcgactgaagcgtctaattatgc +tcagtaccgggtcgtccgggccacaatccgctatcgccctttggtgccgaatgccgtcggtggttacgcaat +ttctatttccttctggcctcagaccacaactacacccacctctgttgatatgaattccataacctccactga +tgttaggattttagtccagcctggtatagcctctgagctggtcatcccgagtgaacgccttcactatcgtaa +tcaaggctggcgctctgttgaaacatctggcgtggccgaggaggaggcgacatcaggtttggtcatgctctg +cattcatggctcccccgttaattcctatactaacacgccctatactggggcattggggcttcttgactttgc +actcgaacttgaattcagaaatctgacccctgggaacactaacacccgtgtgtcccgttacactagcacagc +ccgacaccgcttgcgccgtggtgccgacgggacagccgagcttacaaccaccgcagccacacgttttatgaa +ggacttgcacttta---ccgggacaaat---ggtgttggcgaggtaggccgtggtatagccctaacgctatt +taatcttgctgatacccttctcggcgggctgccgacagaattgatttcgtcggctggaggtcaattgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggcattgctataccacatgatatagacctaggtgactcccgtgtggtcatacaagactatgacaa +ccaacacgaacaggaccggcctaccccgtcgccggccccgtcccgccccttttcagtcctccgagccaatga +tgttctgtggctttc-----------------------------tttaactgcggctgaatatgac------ +cagactacttatggctcgtcgaccaaccccatgtatgtctcggatactgtcacacttgt---taatgtggcg +acaggtgcccaggctgttgcccgttcccttgattggtccaaggtcactttggatggccggccacttaccacc +at-----ccagcagtactccaagacattctatgtgc-tgccgctccgtggtaagctttccttttgggaagct +gggacgactaag--gctggctacccctacaattataatactactgctagtgaccagattttgattgagaatg +cagccggtcac------cgtgttgccat-atctacctacactactagtcttgg--------------tgccg +gccctgtgtctgtttc-tgcagtcggcgttcttgctccacactctgctttagctgtgcttgaagatactatt +gatt---------accccgcccgcg----ctcatacttttgatgacttctgccccgagtgccgtaatc---t +cggtttgcaggggtgtgcttttcagtc--------tactattgctgagctacagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-ccc--ttt------gt +gccc-cct--------tc-taaa-ct-ct----gt-tc-tgt----------------tatt-t-------c +ttttttct----gcgg--------------tttcckcgctccccg---------------------gaa--- +----------------------aaaaaaa------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444030.1/17235/1-7235 |Hepeviridae isolate XTLSEGIR, complete genome +----------gacca--------------caccacg-actatg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggttcggccgttcttatctcgcgtgcagactgagattct +tattaatttgatgcaaccccggcaactggtctttcgtcctgaggtgctctggaatcaccccatccaacgggt +tatacataatgagttggaacagta---ctgccgggctc-gggctggccgttgtttagaggtcggagcccacc +caagatctattaatgacaaccctaatgttctgcaccggtgtttcctgcgaccagtcgggagggacgtccagc +gctggtactccgcccctacccgcggccctgcggctaattgccgccgttccgccttgcgcggtctccctcccg +tcgatcgtacctactgctttgatggattttcccgttgtgcttttgctgcagagactggcgtggccctctatt +ctctgcatgatctctggccagctgacgttgcagaggctatggcccgtcacgggatgacacgtttgtatgccg +cactacacctc-ccccccgaggtgttactgccacctggtacctatcacacaacctcgtacctcctgatccac +gatggcgatcgtgctgtcgtgacctacgagggtgacactagtgcggggtataatcatgatgtttctatcctc +cgtgcgtggatccgcacgaccaagatagttggtgaccacccgttagtgatagagcgtgtgcgggctattggg +tgtcattttgtgttgctactcactgcggcccctgagccgtcacccatgccttatgtcccatacccccggtca +acagaggtgtatgtccgctctatatttggccctggg---------ggctctccgtccctgttcccgtcagct +t----------gttctacaaaatcta-cattccatgccgtcccagttcatatctgggaccggctcatgctct +ttggcgccaccttggatgaccaggcgttctgctgctcgcggctcatgacctacctccgcgggattagctaca +aggtcaccgtaggtgcccttgttgccaatgagggttggaacgcatcagaggacgccctcactgctgttatta +ctgcagcgtatttgaccatttgccaccagcgctacctccgcacccaggcgatatccaagggtatgcgccggt +tggaggttgagcatgctcaaaaatttatcacaagactttacagctggctatttgaaaagtc---------tg +gccgcgattatatccccggccgtcagcttcaattttatgcacagtgtcgccgctggctgtcagcaggcttcc +accttgaccctagggtgcttgtctttgatgaatcagtgccctgc---cgctgtaggacgttccttaaaaa-- +----ggttgcgggtaagttctgctgtttcatgaagtggttggggcagga------atgcacttgtttcttgg +----------------agcctgctgaaggcctggtcggcgattgtggc--------catgataatgaagcct +atgagggctccgaggtcgaccaggctgagcccgcacatcttgacgtttcggggacctatgctgtttatgggc +gccagcttgagaccctatacagggcgctcaacatcccacacgacattgctgcccgcgcatcacgcctgaccg +ctactgttgagctcgctgctggtccagatcgtttggagtgccgcactatactcgggaacaagaccttccgga +caacggtggttgacggcgcccaccttgaggccaacggccc------------------------tgagcagt +atgtcctctcatttgacgcgtccagccagtctatgggggctgggtcgcacaaccttacttatgagctcaccc +ccgctggcctgcaggtgaagatctcgtcc-------aatggcctggattgcaccgcaacattcccc---ccg +ggcggggctcctagcgctgcgccgggggaggtggcagccttctgcagtgccctttataggtataacagattt +actcagcggcattcgctgacgggcggcttgtggttacaccctgaggggctgttrggcattttcccccccttt +tctcccgggcatctttgggagtccgccaatcctttctgcggggaggggaccctttatactcggacttggtct +acatctggtttttctagtgacttctcacctcccgaggcggccgcccctgcaccggccgccgtcca----ggg +gccttttc---accctactccccctgccagcgacat-----------------ttgggtgct---------- +---------accgccgccc----tccgaagatt--------------ctcaggtcgacttgaaatctgtccc +cccca------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccccgaacctgctccgccatccagg +cctgctgagcctagg-------------------------------------gctcctgtgcgtaagccacc +gacaccacc--------------------------------------accccctcgcacccgccgtc----- +-------------------tcctctacacctacccggacggtgctaaggtgtatgcggggtcactgttcgag +tcggattgtgactggctggttaatgcatcaaatcccggccaccgccctgggggcggtctctgccacgccttc +taccagcgtttccccgagtcgt------tccacccgaccgagttcattatgcgggacgg---cctcgctgca +tataccttggtgccccgccccatcatccatgcggtggcccctgactatagggttgaacagaacccaaagagg +ctcgaggcagcgtaccgagagacttgctcccgccgcggcaccgctgcctacccactcttaggcgcgggtata +tatcaagtcccagtcggccttagctttgacgcttgggagcgtaaccaccgccccggcgatgagctttacctg +acygaccctgccgctgcc-------------------------------------------------tggtt +cgaggctaataagcccacgca--------------------------------------------------- +------------------------------------------gccggccctcacgataactgaggacacagc +tc------------gcacggccaacctggcactagagatcg------------atgctgccacagaggttgg +ccgtgcttgt---gccggctgcacagttagcccagggattgtgcactaccagttcactgctggggttccggg +ctcagggaaatcgaggtctatacagcaaggagatgttgacgtggtggttgttcccacccgggaacttcgtaa +cagctggcgccgccgaggttttgcggccttcacacctcacacggctgcccgtgttactacgggccgccgtgt +tgtgattgatgaggccccatcccttccgccacatctattgctgctgcatatgcagcgggcttcgtcggttca +cctccttggtgacccaaatcagatccctgccatagactttgagcacgccggcctggtccccgctatacgccc +tgagcttgcgcctaccagctggtggcacgtcacacatcgttgtcccgcagacgtgtgcgaactcatacgtgg +agcctatcctaagatccagactacgagccgtgtgctgcgatctctattctggaacgaa------cctgccay +tggccaaaagttagtcttcacgcaggccgctaaggctgctaaccctggtgcaattacagtccatgaggccca +gggtgccacttttacggagactacaatcatagccacggccgacgccaggggtcttattcaatcttcccgggc +tcatgctatagtcgcacttacccgtcacacggagaagtgcgtcatattagatgccccyggcctgttgcgtga +ggtcggcatatcagacataattgttaataacttt------------------------------ttccttgc +cggag--gagaggtgggtcatcaccgcccctctgtgataccccgtggtaatcctggtcagaatctcgagac- +-----tctgcaggcctttccaccctcttgtcagattagtgcttaccaccagttagctgaggagctaggccat +cgcccggcccctgttgctgcagttttgcccccctgccctgagctcgagcagggtttgttatacatgccccag +gagctcacggtgtctgacagtgtgttagtgttcgagctcacggacatagtccactgtcgtatggctgccccc +agtcaacggaaggccgtcttatccacgcttgtggggaggtatggccgcaggacgaagttgtacgaggcggct +cattctgatgtccgtgagtctctcgctaggtttatccctactattgggcccgtccaggccaccacatgtgag +ctatatgagttggttgaggctatggtggagaagggtcaggatggctctgccgtgctagaactcgacctatgc +aatcgcgatgtatcgcgtatcacatttttccagaaagattgcaacaagtttaccaccggggagaccattgcc +catggtaaggtcggccaaggtatttcagcctggagtaagaccttctgtgccctgtttggcccgtggtttcgt +gctatcgagaaggaaatactagcgctactcccgcctaatatcttttacggcgacgcttatgaggactctgtg +tttgctgccgccgtttctggggcgggaacgtgcatg---gtgtttgagaatgatttctcagagtttgatagc +acccagaacaatttttccct------------------tggccttgagtgtgtgattatggaggaatgtggt +atgccccagtggctgatccggttgtaccatctagtccggtctgcctggattttgcaggcaccgaaggagtcc +cttaaaggtttttggaagaagcactctggtgagcctggcaccctcctttggaacaccgtctggaacatggca +atcatagcacactgctatgaatttcgtgatttcagggttgctgcttttaagggtgatgattcggtagtcctt +tgcagtgactaccgtcaaagccgcaatgcggcagccttgattgcaggctgcgggctcaaactgaaggttgac +tatcgccctattgggttgtatgctggcgtggtggtggcccctggtttggggacattacccgatgtggtgcgt +tttgctggtcggctttctgagaagaactggggcccaggccccgagcgggctgagcagctacgccttgcggtt +tgcgatttccttcgtgggttaacgaatgtggcgcaggtatgtgttgatgttgtatcccgtg-------ttta +tggagtcagtcctgggctggtacataaccttatcggcatgctgcagactattgctgatggcaaggctcattt +tacagagactgtgaaacctgtgctcgaccttacaaattctatcatacatcgggtggaatgaataacatgtc- +t----------------tgtgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgactggcc------------gtcgtcgtgggcg-gcgcagcggcaatgc +cagcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcattccacaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggttcctcttggcgcgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgccgtatcaccggcccccgacacagcccctgtgcctgatgtcgattcgcgcggcgctatcctgcggcggca +gtataacttatctacatccccgctcacatcatctgttgcttcgggtactaatctggttctatatgctgcccc +gttaaaccctcttctaccccttcaggatgggaccaacacccatatcatggctacagaggcatccaattatgc +ccagtaccgggttgttcgagctacgatccgttaccgccctctggtgccgaatgctgtcggcggctatgcaat +atctatttctttttggcctcagactaccactacccccacatccgttgacatgaattctattacttctactga +tgtcaggattttggtccaacccggtattgcctccgaactggttattcccagcgagcgcctccactaccgcaa +tcaagggtggcgctctgttgaaacctcaggtgtggccgaagaggaggctacttccggcttggttatgctttg +catccatggttctcctgtcaattcctataccaacaccccttacactggggcgcttggtcttcttgactttgc +actggagcttgaatttaggaatctaacacctggtaacaccaacacccgcgtgtcccggtatacaagtacagc +ccgccaccgactgcgtcgtggcgccgacggtaccgctgaacttaccaccacggcagctacacggttcatgaa +ggatctacatttca---ccggtacgaat---ggggtcggtgaggtcggtcgtggcattgctctgacactgtt +caaccttgctgatacgcttctcggtggattgccgacagaattaatttcgtcggctgggggtcagttattcta +ctcccgccccgttgtctcagccaatggcgagccgaccgttaagttatatacatctgttgagaatgcgcagca +agacaaaggtatcgctatcccgcatgatatagacctgggtgactcccgtgtggtcatccaggattatgacaa +tcaacacgagcaggatcggccgactccttcacccgctccatcccgcccgttctctgtccttcgtgccaatga +tgtcttgtggctttc-----------------------------ccttactgctgccgagtatgac------ +cagactacatatgggtcgtccaccaatccaatgtatgtctcggataccgtgacatttgt---caatgtagct +acaggggcccaggctgttgctcgctcccttgactggtctaaagttactttggacggccgccctctcactact +at-----tcagcagtactccaagacattttatgttc-tcccgctccgcgggaagttatctttctgggaggcc +ggtacaaccaag--gccggctacccttataattataacacaactgctagtgatcaaattttgattgaaaatg +cggctggtcat------cgtgtcgctat-ttccacctatactactagcttggg--------------tgccg +gccctgtgtcggtctc-cgcagtgggtgtactagcgccacactcggcccttgctgtccttgaggacactgtc +gatt---------acccggctcgcg----ctcatacatttgatgatttctgcccggagtgtcgcgccc---t +tggtctgcaggggtgtgccttccagtc--------tactatcgctgagcttcaacgtct------------- +--------taagatgaaggtaggtaaaacccgggagttttaattaa-tt----c----tt-cct------gt +gccc-cct--------tc-gtaa-tcttt---tgc-t----t----------------tatt-t-------c +tcttttct----gg----------------ttcct-cgctccccg---------------------gaaaaa +aaaa-------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444032.1/17197/1-7197 |Hepeviridae isolate HEPAC1, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatctcgtgttcaaactgatattct +tattaacctgatgcaaccccggcagcttgtgttccgacccgaagtcctctggaaccacccgatccagcgagt +tatacataatgagctggagcaata---ctgccgagccc-gcgctggccgctgtcttgaggtgggcgctcacc +cgagatccattaacgataaccccaatgtyctgcaccggtgctttcttcgtccggttggaagagacgtccagc +gttggtactctgcccccacccgtggtccagcggctaactgccgccgttctgcgctgcgtggtttgccccctg +tcgaccgcacatactgtttcgacgggttctcccgytgcacctttgccgctgagaccgggatcgctttatact +cattacatgacctttggccctcggatgttgcggaggctatggcccgccacgggatgacgcgtttgtatgctg +ccctccattta-ccccctgaggttctgttaccacctggcacttaccatacaacctcttatcttctgattcat +gacggcaatcgcgccgtcgtgacttatgagggggataccagtgcgggctataaccatgatgtgtccatactt +cgtgcatggatccgcaccactaaaatagttggtgatcacccactggtaatagagagggtccgtgccatcggc +tgccattttgtcctactgcttactgcagcccccgagccatccccgatgccttatgttccgtaccctcgctca +acagaggtttatgttaggtccatatttggtcctggc---------gggtcgccytctcttttcccatcagcc +t----------gctctaccaaatcca-cattccatgctgttcctgttcatatctgggaccgacttatgctct +ttggtgccactctwgacgatcaggccttttgctgctcgcggcttatgacttatctccgcgggattagctata +aagtgaccgttggcgcacttgttgccaacgagggctggaatgcctcggaagatgcgcttactgctgtgatca +ccgcagcgtacttgactatctgtcatcagcgctatttacgaacacaggccatctccaaaggcatgcgccggc +tagaggttgagcatgctcagaagtttatcacgaggttatacagctggttgtttgaaaagtc---------ag +gccgcgactacatccccggccgccagctycagttttaygcacagtgccgccgttggctctcagctggtttcc +atctggatcctagagtycttgtcttcgatgaggcggtcccctgc---cgttgtcggagtttcttaaagaa-- +----ggttgccggaaagtcttgttgttttatgaaatggttggggcagga------gtgtacctgcttccttg +----------------agccagcggaaggcttggttggcgactgtggc--------catgataatgaggcct +atgaggggtctgaggtggaccctgccgagcccgctcaccttgacgtttctgggacttacgcggtccatggtc +gtcagcttgaggctttatatagagcgcttaacatcccagatgacattgtggcccgtgcgtcacgcctgacgg +ccactgtggaacttgccgctagcccgggccgactcgagtgccgtacggtgcttgggaataagaccttccgta +catcaataactgatggtgctcacctcgaagccaacggccc------------------------cgaacagt +aygtcttgacatttgatgactctcgycaggcaatgggggctgggccccacagcctcacgtatgaacttgtcc +ccgccggtctgcaggttaaaatatcttct-------aatggcctagactgtaccgctatattttcc---cct +ggtggggcgccaagcgctgcaccaggcgaagtggcggccttttgcagctccctatataggtataataggttc +acccagcgccattcgctgaccggtgggctgtggctgcaccctgaggggctccttggcctgttcccscctttc +tcyccggggcatgtttgggagtctgcaaaccctttttgcggtgagagcacactttatacacggacttggtct +acatctggtttctctagcgacttctccccgcccgaggcggcccatgccgccccagttcctgtcgt----agg +gctaccttcgggtaccccttcgtctgctagtgatgt-----------------cygggtgtt---------- +---------cccaccgccc----tctgaggggt--------------cggcgatygttctgccacccgaaay +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtaagccagctagcccacctagt +cccactccgcctggg-------------------------------------ccccccgcccgtaagccrtc +tacaccgyc--------------------------------------gccggcycgcactcgccggc----- +-------------------tcctttacayataccctgatggtgccaaggtgtatgcaggttctctgtttgag +tctgactgtgattggctggttaatgcatctaaccytggccaccgtcccggcggtggcctctgccatgcgttt +tatcagcgcttcccggagtcgt------tccatccaactgattttgttatgcgtgaggg---cctcgccgca +tacactttgagcccgcgcccgattattcatgcagtagcccccgattacagggttgagcagaaccccaagagg +ctagaggcggcatatcgtgagacctgctcccgcctcggcacagctgcctacccgctattggggtcggggatc +taccaggtgcctgtaggcctaagctttgacgcctgggagcgtaaccaccgcccaggcgatgaactttacctt +actgagccagccgccgcc-------------------------------------------------tggtt +tgaggctaataagccaactca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacactgc +cc------------gcacagccaaccttgcccttgcgattg------------attccgccactgaggtggg +ccgtgcttgc---gctggctgtaccattaaccccgggattgtccattaccagttcaccgccggggtccctgg +ctccgggaagtctaggtctatacagcagggggacgttgatgttgtagtcgtgccaactcgtgagctccgcaa +cagttggcgacgccgcggctttgctgcttttacaccccacacagcagcccgtgttaccgctggccggcgtgt +ggtgatagacgaggcgccttcgcttccgccgcacctgctgttgctccacatgcagcgagcctcatcggtcca +tcttcttggcgaccccaaccagatccccgcyattgattttgagcatgccggtttagtcccggcaattcgccc +cgagcttgccccgactagctggtggcatgttacccatcgttgccccgctgatgtgtgcgagctcatacgcgg +ggcctatccgaagattcagacgaccagccgtgtgctgcgatctctattctggaatgag------cccgcggt +gggtcagaggctagttttcacgcaggcagccaaggcggccaaccccggcgcaatcaccgttcatgaggccca +gggtgccacattcacggagaccaccatcatagccacggccgatgctagaggtcttattcagtcctcccgtgc +gcatgccatcgttgcacttactcgccatacagaaaagtgcgtcattcttgatgcccccggcctactgcgcga +ggttggcatttctgatataattgttaacaacttt------------------------------ttcctggc +tggtg--gtgaagtgggccatcatcgcccctctaccataccccgcggcaacccggaccagaacttagacac- +-----cctacgagcgtttccgccgtcctgccaaattagtgcctaccatcagctggctgaggagctgggccac +cggccagctccggtggccgccgtcctgcccccctgccccgagcttgagcaggggctactttacatgccgcag +gagcttacggtgtccgatagcgtcctaatctttgagctcacagacatagttcactgtcgtatggctgcccct +agccaacgtaaggcggtcctctcgacgctcgtcggcaggtacggccgccggacgaagctgtatgaagcggcc +cactctgatgttcgtgagtctctagggagattcatccctaccatsggaccggttcaggccaccacatgcgag +ctatatgagctggttgaggctatggtggagaagggccaggatggctccgccgtgctcgagctcgacctctgc +agccgtgatgtctcgcgtattacattcttccagaaggactgtaataaatttacaacaggtgagaccattgcc +cacggcaaggtgggccagggcatttcggcttggagtaagaccttytgtgctctatttggcccgtggttccgt +gctatcgagaaggagattctagctctgctcccacccaatattttttatggtgatgcctatgaggagtcagtg +ttttctgcagccatctctggggctggctccagtatg---gttttcgagaacgatttttctgagtttgatagc +acccaaaacaatttttctct------------------tggccttgagtgtgttattatggaggagtgtggc +atgcctcagtggcttattcgactatacyatttggttaggtcagcctggactctgcaagccccgaaagagtct +ttgaaaggtttctggaagaagcaytctggcgagcccggtactctcctctggaataccgtttggaacatggcg +atcatagcacactgttatgaattccgtgacctgagagtagcggcgtttaagggggatgattcagtggttctt +tgcagtgattaccgtcagagycgtaatgcggccactctgatagccggttgygggctgaaactgaaggttgat +taccggcctataggcttgtatgccggtgttgtagtggccccgggcctyggggcacttcctgatgttgttcgg +tttgccggtcgattatctgagaagaattggggcccgggccccgagcgcgccgaacagttacgcctagcagtt +tgtgatttccttcgagggttgacgaacgttgcgcaggtttgtgttgatgttgtgtctcgcg-------tcta +tggggttagccccgggctagtacataaccttattggcatgctacagactatcgctgatggaaaggcccactt +tactgagactgttaarcctgtacttgacctcacaaattctatcatacagaggttggaatgaataacatgtt- +t----------------agtgcatcgcccatggg------------atcaccatgtgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-cacmgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cagcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccaccgacgtcgcattacaacctggggctggagctcgctctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtctcaccagcgcctgatactgccccagtycctgatgtcgactcccgtggcgctattttgcgccgcca +gtataatttgtctacttctcctttaacttcatctgttgcctctggaactaatcttgttttgtatgctgcccc +gctyaacccccttctgcccctccaggacggcactaatactcatatcatggcgactgaagcgtctaattatgc +tcagtaccgggtcgtccgggctacaatccgctatcgccctctggtgccgaatgccgtcggtggttacgcaat +ttctatctccttctggcctcagactacaactacacccacatctgttgatatgaattccataacctcgactga +tgttaggattttagtccagcctggtatagcctctgagttggtcatcccgagtgaacgccttcactatcgtaa +tcaaggttggcgctctgttgaaacatctggcgtagccgaggaggaggcgacatcaggcctggtcatgctttg +cattcatggttcccccgttaattcctataccaacacgccctataccggggcgttggggctccttgactttgc +actcgaacttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgttacactagcacagc +ccgacaccgcttgcgccgtggtgccgacgggacagccgagcttacaaccaccgcagccacacgttttatgaa +ggacttgcatttta---ccgggacaaat---ggtgttggygaggtaggtcgtggtatagccytaaccttatt +taatcttgctgatacccttctcggcgggctgccgacagaattgatttcgtcggctggaggtcaattgtttta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaarggcattgctataccacatgatatagacctaggggattcccgtgtggttatccaagactatgataa +ccaacatgaacaggaccggcctaccccgtcgccggccccgtcccgccccttctcagtcctccgggccaatga +tgttctgtggctctc-----------------------------tttaactgcggctgaatatgat------ +cagactacttatggctcgtcgaccaaccccatgtatgtttcggatactgtcacacttgt---taatgtggcg +acaggtgcccaggctgttgcccgttcccttgattggtccaaggttactttggatggccggccactcaccacc +at-----ccagcaatactccaagacattctatgtgc-tgcctctccgtggtaagctctccttttgggaagct +gggacgactaag--gctggctacccctataattataatactactgccagtgaccagatcttgattgagaatg +cagccggtcac------cgtgttgccat-atccacctacactactagtcttgg--------------tgcyg +gccctgtgtctgtctc-tgcggtcggcgttcttgctccgcactctgctttagctgtgcttgaagatactatt +gatt---------accccgcccgtg----cccatacttttgatgacttctgccctgagtgccgtaatc---t +cggtttgcagggatgtgctttccagtc--------tactattgctgagctacagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc--cc--ttt------gt +gccc-cct--------tc-taaa-ct-ct----gc-cc-tgt----------------tatt-t-------c +ttttttc----------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444035.1/17267/1-7267 |Hepeviridae isolate HEPAC178, complete genome +-----------------------gcta----tagat-gtgcac-------------g-----ggtcgaygc- +---catggaggcccatcagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatcccgtgcccaaactgatatcct +tattaatttgatgcaaccccggcaactagtgtttcggcctgaagtcctttggaatcatccgatccagcgggt +tatacataatgagctggagcagta---ctgccgagccc-gcgctggccgttgtcttgaagtgggcgctcatc +caagatctattaatgataaccccaatgttctgcatcggtgctttctccgcccggttgggagagacgtccagc +gctggtattccgcccccactcgtggcccagcggccaactgccgccgttctgcgctacgcggtttgccccccg +tcgatcgcacgtattgcttcgacgggttctcccgttgcgcctttgccgctgagaccggggtcgctttatact +cattgcatgacctttggccctcggatgtcgcggaggcgatggcccgccacgggatgacgcgcttgtatgctg +ccctccaccta-ccccctgaagttctgttaccacctgggacttaccatacaacttcctatcttctgattcac +gacggcagtcgcgccgtcgtgacttatgagggggacactagtgcgggttataatcacgatgtgtctatactt +cgtgcatggattcgcaccactaaaatagttggtgaccacccgctcgtaatagagagggtccgtgccattggc +tgccattttgtcttactccttactgcagcccccgagccgtccccgatgccttatgtcccgtaccctcgttca +acagaggtgtacgttagatccatatttggccccggc---------gggtcgccctctcttttcccatcagcc +t----------gctctactaagtcta-cattccatgccgtcccggtccatatctgggaccggcttatgcttt +ttggtgccaccttggatgaccaggccttttgctgttcccggcttatgacctatctccggggaattagctata +aagtgaccgttggcgcgcttgtcgccaacgaaggctggaatgcctcggaggacgcgctaactgctgtgatta +ctgcagcatatttgactatctgccatcagcgctacctacgaacacaggccatttctaaaggcatgcgtcggc +tagaggttgagcacgcccaaaaatttatcacaaggctgtatagctggctgtttgaaaagtc---------ag +gccgtgattacatccccggtcgccagctccaattttacgcgcagtgccgccgttggctctcggctggcttcc +acctggaccccagagttctcgtctttgatgaggcggtcccctgc---cgatgccggagcttcttaaagaa-- +----ggtcgccgggaaattttgctgctttatgaagtggttggggcagga------gtgcacttgtttcttgg +----------------agccagaggaaggcctggttggtgactgtggc--------catgataatgaggcct +atgaggggtctgaggtggaccccgccgagcctgcttatattgatgtttctgggacttatgcggtccacggcc +gtcagcttgaggccctatatagggcgcttaatattccagatgatattgcagctcgtgcatcacgtctgacag +ctaccgtggagcttgccgccagcccaggcagactcgagtgccgtacggtccttgggaataagatcttccgca +catcaataactgatggtgcccacctcgaggccaacggtcc------------------------tgagcagt +acgttttgacatttgacgactctcgccaagtgatgggagctgggcctcatagcctcacgtatgaacttgtcc +ctgctggcctgcaggttagaatatcttct-------aatggcttggattgcaccgccatattccct---cct +ggcggtgctccgggtgctgcgccaggtgaagtcgcggctttctgtagcgccctttacaggtacaataggttt +acccagcgtcattcgctgactggtgggttgtggctgcaccctgaggggctccttggcctgtttccccctttc +tccccagggcatctttgggagtctgcaaaccccttctgtggtgagagcacactttacacacgaacttggtct +acatctggtttttctagcgacttttccccacccgaggcggctcatgccgccccagtccctgacac----ggg +gttaccttcgggtgccctctcatccgctagtgatat-----------------ctgggtgtt---------- +---------tccgccgccc----tctgaggggt--------------cggtgatctctccgccacccacaac +cccggtcggtaggccaactga---------------------------------------tccgcc------ +------------------------------------------------------------------------ +-tggccacac-------------------------------------------------------------- +-------------tacacct----aggttatccatccgtgagccgtctgtaccaccacccgccctgacccca +g---------------------------------------------ttagtaagccagctaatccgcttagc +cttactgcacctagg-------------------------------------ccccccgtttgcgagccgcc +cacaccgcc--------------------------------------atcggcccgtactcgccggc----- +-------------------ttctttatacataccctgatggggccaaggtgtatgcaggctctttgtttgag +tcagattgctactggctggtcaatgcatctaaccctggccaccgtcctggtggtggcctctgtcatgcattt +taccagcgttttccagagtcgt------ttcaccctaccgattttgttatgcgcgaggg---tctcgccgca +tataccttgagcccgcgcccgatcattcatgctgtggcccctgactatagggttgagcagaaccccaagagg +ctggaggcggcatatcgtgagacttgctcccgcctcggcacagctgcctacccgctactggggtcagggatc +taccaggtccccgtaggcctaagttttgacgcctgggagcgtaatcaccgcccgggcgatgaactctacctt +actgagccagctgccgcc-------------------------------------------------tggtt +tgaggctaataagcctactca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacaccgc +tc------------gcactgctaaccttgcgcttgagatcg------------actccgccactgaggtagg +ccgtgcttgt---gccggctgcactattaaccccgggattgtccactaccagttcactgccggggttcctgg +ttccgggaagtctaggtccatacagcaaggggatgtggatgttgtggttgtgccaacccgtgagcttcgcaa +cagttggcggcgccgcggctttgctgcttttacacctcacacagcagctcgtgttactgccggccggcgtgt +ggtgatagatgaagcaccttctcttccaccgcacctgctgttgcttcatatgcagcgagcctcatcagtcca +tcttcttggcgaccccaatcagattcctgccattgactttgagcacgccggtttggtcccggcgattcgccc +tgagctagcccctactagctggtggcatgtcacccaccgctgccccgccgatgtgtgtgagctcatacgcgg +ggcttacccaaagatccagacgaccagccgtgtgctgagatctctattttggaacgag------cctgcgat +aggtcagaagctggttttcacgcaggcagccaaggccgccaatcccggtgcaatcaccgtccacgaggccca +gggggccacgtttactgagactaccattatagccacggccgacgctagaggtcttattcagtcttcccgcgc +acatgccatcgttgcgcttactcgccatacagaaaaatgcgttattctcgacgctcctggcctattgcgtga +ggttggcatttctgatataatagttaacaacttc------------------------------ttcctggc +tggcg--gtgaagtgggccaccatcgcccttctatcatcccccgcggcaacccagaccagaatttagacac- +-----cctccaagcgttccctccgtcatgccaaatcagcgcttaccaccagctggctgaggagttgggccac +cggccggccccagtggccgccgtcctgcccccctgccctgagctagagcaggggttactctatatgccgcag +gagcttacggtgtccgatagtgtcctaatttttgaactcacggacatagttcactgtcgtatggctgccccc +agtcaacgtaaggcggtcctctctacgctcgtcggcaggtacggccgccgaacgaagttgtatgaagcggcc +cattctgatgtccgcgagtctttaggtaggtttatccctactatcggaccggtccaggccaccacatgtgag +ctatatgagctggttgaggccatggtggagaagggtcaggatggatccgctgtgcttgagcttgacctctgc +aaccgtgacgtctcgcgtattacatttttccagaaggattgtaacaaatttacaacaggtgagactattgcc +cacggtaaggtaggccagggcatttcggcttggagtaaaaccttctgtgctttatttggcccatggttccgt +gccattgagaaggagatcctggctctgctcccacccaatattttctatggcgacgcctatgaggagtcagtg +ttttctgcagccatctctggggctggctccagtatg---gtttttgagaatgatttttctgagtttgacagc +actcaaaataatttctccct------------------tggccttgagtgtgttattatggaggagtgtggc +atgccccaatggcttatccgattgtaccatttagttagatcagcctggattctgcaagccccgaaagagtct +ctgaaaggattctggaagaagcattcyggcgagccyggcrykcwcmtctrkaryaccgtctggaacatggcg +atcatagcacactgctatgaattccgtgacctgagagtggcagcgtttaaaggggatgattcagtggttctt +tgcagcgattaccgtcagagccgcaatgcggccactctgatagccggttgtgggttgaaactgaaggttgat +taccggcctataggtttgtatgccggcgttgtggtggccccgggtctcggggcactccctgatgttgttcgc +tttgcaggtcggttatccgagaagaattggggtccgggccccgagcgcgccgaacagttgcgcctagcggtt +tgtgattttcttcgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacagactattgctgatgggaaggcccattt +cactgagactgttaagcctgtgttggatcttacaaactctatcatacagaggttagaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcagtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaatccggggctggagctcgcccta +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgccgtttcaccagcgcctgacacggccccagtccctgacgttgactctcgtggcgctatcctgcgccgtca +gtacaatctgtccacctctcctctaacttcatctgttgcctctggaactaatcttgtcttgtatgccgcccc +gcttaaccctcttctgcctcttcaggacggcaccaatactcacattatggcgactgaggcgtctaattacgc +ccagtaccgggttgtccgggctacaatccgttaccgtcccttggtgccgaatgccgttggtggttatgcaat +ttctatttcattctggcctcagactacaactacacccacctctgttgacatgaactctattacttccactga +tgttagaattttagtccagcctggcatagcctcagagttggtcatcccgagtgagcgccttcactatcgtaa +tcaaggttggcgttctgtcgagacgtcgggtgtggccgaggaggaggcgacatcaggcttggtcatgctttg +tattcatggttcccctgtaaattcctataccaacacgccctatactggggctttggggctcctcgattttgc +actcgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgttacactagtacagc +ccggcaccgcctgcgtcgtggtgctgatgggacagctgagcttacaaccactgcagccacacgttttatgaa +ggacctgcatttca---ccgggacgaat---ggtgttggtgaggtgggtcgtggtatagccctaacgctatt +taatcttgctgatacacttctcggtgggctgccgacagaattgatttcgtcggctggaggtcaactgtttta +ctcccgcccggttgtctcggccaatggcgagccaactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggtattgctataccacacgatatagacttaggggactcccgtgtggttatacaggactatgacaa +tcaacacgaacaggaccggcccaccccgtcgccggccccatcccgtcccttttcagtccttcgagccaatga +tgttttgtggctctc-----------------------------tctgaccgcagctgaatatgac------ +cagactacttatggctcctcaactaaccccatgtatgtttcagatactgtcacatttgt---taatgtggcg +acaggcgcccaggctgttgcccgatcccttgattggtccaaggttaccttggatggccggccacttactacc +at-----ccagcagtattccaagacattttatgtcc-taccgcttcgtggcaagctctccttttgggaagct +ggttcgactaag--gctggctacccctacaattacaacactactgctagtgatcagattctgatcgagaatg +cggccggtcac------cgcgttgctat-atctacttacactactagtctcgg--------------cgccg +gtcctgtgtctgtttc-tgcagttggcgttcttgctccgcactctgctttagctatgcttgaagatactatt +gatt---------atcctgcccgtg----cccatactttcgatgatttctgccctgagtgccgcaatc---t +cggcctgcagggttgtgctttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-t-c--ctt------gt +gccc-cct---------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444038.1/17290/1-7290 |Hepeviridae isolate HEPAC92, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactctgccctggcgaatgctgtggtggttcggccgtttctatcccgtattcagactgatatcct +tattaacctgatgcaaccccgacagcttgttttccggcctgaagttctctggaatcacccgatccagcgcgt +tatccataatgagctggagcaata---ctgccgagccc-gcgctggccgctgtcttgaggtgggcgctcacc +cgagatccatcaatgataaccccaatgttctgcaccggtgctttctccgcccggtcggtagagacgtccagc +gctggtattctgcccccactcgtggtccagcggctaactgccgccgctctgcactacgtggtttgccccctg +tcgatcgtacatattgcttcgacgggttttcccgctgcgcctttgccgctgagaccggaattgctttatatt +cactgcatgacctttggccctcggacgtcgcggaggccatggctcgccacgggatgacgcgattgtatgctg +ccctccaccta-ccccctgaggttctgttaccacctggcacttaccacacaacttcctatcttctgattcac +gacggcaatcgtgccgtcgtgacttacgagggtgatactagtgcgggctataatcacgatgtgtctatactt +cgtgcatggatccgcaccaccaaaatagttggcgaccacccactggtaatagagagagtccgcgccatcggc +tgccattttgtcctacttcttactgcagcccccgagccatccccaatgccttatgttccgtaccctcgctca +acagaggtgtatgttagatccatatttggtcctggt---------gggtcaccttctcttttcccgtcagct +t----------gctctactaagtcta-cattccatgccgtcccagttcatatctgggaccggctaatgctct +ttggtgccaccttagacgaccaggccttttgctgctcgcggcttatgacctatctccgcgggattagctata +aagtgactgttggcgcacttgtcgccaacgaaggctggaatgcctcagaggacgcgctcaccgctgtgatta +ctgcagcgtatctgaccatctgccatcagcgctacttacgaacacaggccatttccaaaggcatgcgtcggt +tagaggttgagcatgcccaaaagtttatcacaaggttatatagttggctgtttgaaaagtc---------ag +gccgtgactacatccccggtcgccagctccagttttatgcacagtgccgccgctggctctcggccgggtttc +atctggaccctagggttctcgtttttgacgaggcggtcccttgc---cgctgccggagcttcttaaagaa-- +----ggttgccggaaaattttgttgttttatgaaatggttgggccagga------gtgcacctgctttttgg +----------------agccagcggaaggcctggttggtgattgtggc--------catgataacgaggcct +atgaggggtctgaggtggaccccgccgagcctgcttatcttgatgtttccgggacctatgcggtccacggct +gtcagcttgaggctctatatagagcgctcaatattccagatgacatcgcggctcgtgcgtcacgtctgacgg +ctactgtagaacttgccgccagcccaggtcgactcgagtgccgtacggtgcttgggaataagacttttcgca +catcaataactgatggcgcccatctcgaggccaacggtcc------------------------cgagcagt +acgtcctgacatttgacgactctcgccaggccatgggggctgggccacacagccttacgtatgaacttgtcc +ctgccggcttgcaagtcaaaatatcttct-------aatggcctggattgtactgccatattcccc---cct +ggtggggcaccaagtgcagcaccaggtgaagtggcggctttctgcagcgccttatacaggtacaataggttc +acccagcgccattcgctgaccggcgggttgtggctgcaccctgaggggcttcttggccttttcccccctttc +tccccggggcatctatgggagtctgcaaaccccttttgtggtgagagtacactttacacacgaacatggtct +acatctggtttttccagcgacttctccccacccgaggcggcctatgcctccccagcgcccgacat----ggg +gttaccctcgggcacctcctcatccgctagtgatat-----------------ctgggcgtt---------- +---------cccaccgccc----tctgagaggt--------------cggcgaccgccccaccacccgtaat +tccagctagtaagccagctaa---------------------------------------tccacc------ +------------------------------------------------------------------------ +-aagtcttgc-------------------------------------------------------------- +-------------cacacct----aggtcccccgtttgtgagccgcctacactaccaccggccctcaccccg +g---------------------------------------------tcagtaaaccagctagcccgtctagc +cttactacatacagg-------------------------------------tctcctgcccgtaagccacc +ctcaccacc--------------------------------------accggctcgcacccgccggc----- +-------------------tcctttatacataccctgatggggccaaggtgtatgcaggctctttgtttgag +tctgattgtgactggcttgttaatgcatctaatcctggccaccgtcctggcggcggtctctgtcatgcattt +taccaacgcttcccggagtcat------tccatccgactgattttgtcatgcgtgaagg---tctcgccgca +tatactttgagcccgcgcccgatcattcacgcagtggcccccgattatagggttgagcagaaccccaagagg +ctggaggcggcatatcgtgagacctgctcccgcctcggcacagccgcgtatcctctattggggtcagggatt +taccaggtccctgtgagtttaagtttcgacgcctgggagcgtaaccaccgcccaggtgatgaactgtacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaataactgaggacaccgc +cc------------gcacggccaaccttgcgcttgagattg------------actctgccactgaggtggg +ccgtgcttgc---gccggctgtactattaaccccgggattgtccattaccagttcaccgccggggtccctgg +ctctgggaagtctagatccatacagcagggggatgtygatgtcgtggttgtaccaactcgtgagcttcgcaa +cagttggcgacgccgtggctttgctgcttttacaccccacacagcagctcgtgttaccgccggccggcgtgt +ggtgatagacgaggcaccttcgcttccaccgcacttgttgctgctccacatgcagcgagcctcatcggtcca +tctccttggtgatcccaaccagattcctgccattgactttgagcacgctggtttggtcccggcgattcgtcc +cgagttagctcctactagttggtggcatgttacccaccgctgccccgccgatgtatgtgagcttatacgcgg +ggcctaccccaagatccagacgaccagccgtgtgctaaggtctttattctggaatgaa------cctgcggt +gggtcagaggctggttttcacgcaggcagccaaagcggccaaccccggcgcaatcaccgtccatgaggccca +gggtgccacgtttactgagactactatcatagccacggccgatgctagaggtcttattcaatcttcccgcgc +acatgccattgttgcgctcactcgccatacagaaaagtgcgtcattctcgacgctcctggcctgttgcgtga +ggtcggcatctctgatataattgttaataatttt------------------------------ttcctggc +cggtg--gcgaagtgggccaccaccgcccttcaattataccgcgcggcaaccctgaccgaaatttagacac- +-----cctacaggcattccctccgtcctgccaaattagtgcctaccaccaattggctgaagagctgggccac +cggccggcccctgtggccgccgtcctgcccccttgccctgagcttgagcaggggttactctacatgccgcag +gagcttacggtgtccgacagcgtcctaatttttgaactcacggacatagtccactgccgtatggccgccccc +agccagcgtaaggcggtcctttctacgctcgtcggtaggtacggccgccgaacgaagctgtatgaagcggcc +cattctgatgttcgtgagtctttgggaaggttcgtccctactatcggcccggtccaggccaccacatgtgag +ttatatgagttggttgaggccatggtggagaagggccaggatggctccgccgtgcttgagctcgacctctgc +aaccgtgatgtctcgcgtattacattcttccagaaggattgtaataaatttacaacgggtgagaccattgcc +cacggcaaggtgggccagggcatttcggcttggagtaagactttttgtgctttattcggtccgtggttccgt +gctattgagaaggagatcctggctctgctcccacccaacattttctatggcgatgcctatgaggagtcagtg +ttttctgcagccatttctggggctggctccagtatg---gtttttgagaatgatttctctgagtttgatagc +acccaaaacaatttttctct------------------tggccttgagtgtgtcattatggaggagtgtggc +atgccccagtggcttatccgactgtatcatttagttagatcggcctggattttgcaagcccctaaagagtct +ctgaaaggtttctggaagaagcattcyggcgagcctggcaccctcctttggaacaccgtttggaatatggct +atcatagcacactgctatgagttccgtgatctgagggtggcagcgtttaagggggatgattcagtggttctt +tgcagtgattaccgccagagccgcaatgcagctaccctgatagccggttgtgggttgaaactgaaggttgat +taccggcctataggtttgtatgccggcgttgtagtggccccgggcctcggggcacttcctgacgtcgtccgg +ttcgccggacgactgtctgagaagaactggggcccgggccccgagcgcgccgaacagctgcgcctagcagtt +tgtgatttccttcgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacagactattgctgatgggaaggcccattt +tactgagactatcaaacctgtgctggatcttacaaattctatcatacagaggttggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgtttt +gttgttgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcagcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcttaccacaacccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtttctccagcgcctgacacggccccagttcctgatgttgattctcgtggtgctatcttgcgccgtca +gtataatttgtctacctctccattaacttcatctgtagcttctggaactaatcttgtcctgtatgccgcccc +gcttaaccctcttctgcctctccaagacggcaccaatactcacattatggcgactgaggcgtctaattacgc +ccagtatcgggttgtccgggctacaatccgttatcgccctttggtgccgaatgccgtcggtggttacgcaat +ttcaatttccttctggcctcagactacaactacacccacctccgttgatatgaattccattacttctactga +tgttaggattctagtccagcctggcatagcctctgagcttgtcatcccgagtgagcgccttcactatcgtaa +tcaaggctggcgttctgttgagacatcgggtgtggctgaggaggaggcgacatcaggcctggttatgctctg +tattcatggctcccctgttaattcctatactaatacaccctatactggggcattagggctccttgactttgc +actcgagcttgagtttagaaatttgacccctgggaacactaacacccgtgtgtcccggtacactagtacagc +ccggcaccgtttgcgccgcggtgccgatgggacagccgagcttacaaccaccgcagccacacgttttatgaa +ggacttgcatttca---cagggacaaat---ggagttggtgaggtaggccgtggtatagccctaacgctatt +taatcttgctgacacacttctcggcgggttgccgacagaattgatttcgtcggccggaggtcaactgttcta +ctcccgcccggtcgtctcagccaatggcgagccaactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggcattgctataccacatgacatagacttaggggattcccgcgtggttatacaagactatgacaa +tcaacatgagcaggaccggcctaccccgtcgccggccccgtcccgccccttctcggtccttcgagccaatga +tgttctgtggctctc-----------------------------tctgactgcggctgaatacgat------ +cagaccacctatggctcgtctactaaccccatgtatgtttcagatacagtcacatttgt---taatgtggcg +acaggagcccaggccgttgcccgatcccttgattggtccaaggtcactttggatggccggccacttactacc +at-----acagcagtactccaagacattttatgtac-tgccacttcgtggcaagctttccttttgggaagct +ggcacgactaag--gctggctacccttacaattataacactactgctagtgaccagatcctgatcgagaatg +cagccggtcac------cgtgttgccat-atctacttataccactagtcttgg--------------tgccg +gccctgtgtctgtttc-tgcggtcggcgtccttgccccgcattctgctttagctgtgcttgaagatactatt +gact---------atcctgcccgtg----cccacactttcgatgacttctgccctgagtgccgcaatc---t +tggcttgcagggctgtgctttccagtc--------tactgttgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-cccc-ttt------gt +gccc-cct--------tc-taaa-ct-tt----gc-tc-tgt----------------tatt-t-------c +ttttttct----gcg--------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444039.1/17253/1-7253 |Hepeviridae isolate HEPAC151, complete genome +--------------------------------------------------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatcccgtgttcaaactgatatcct +tattaacttgatgcaaccccgacagcttgtgttccggcccgaagtcctctggaatcatccgatccagcgagt +tatacataatgaattggagcagta---ctgccgagccc-gcgctggccgttgtcttgaagtgggagctcacc +caagatctattaatgataaccccaatgtcctacaccggtgctttcttcgtccggttggaagagacgtccagc +gctggtattccgcccccactcgtggtccagcggccaattgccgccgttctgcgctacgcggtttgccccctg +tcgaccgcacgtattgcttcgacgggttctcccgctgcgcctttgccgctgagaccgggatcgctttatact +cactgcatgacctttggccctcggatgttgcggaggctatggcccgccatgggatgacgcgcttgtatgctg +ccctccactta-ccccctgaagttctgttaccacctgggacttaccacacaacttcctatcttctgattcac +gacggcaatcgtgccgtcgtgacttatgagggggatactagtgcgggttataatcacgatgtgtctatactt +cgtgcatggattcgcaccactaaaatagttggtgaccacccgctggtaatagagagggttcgcgccatcggc +tgccatttcgtcttactccttactgcagcccccgagccgtccccaatgccttatgtcccgtaccctcgttca +acagaggtgtacgttagatccatatttggccccggc---------gggtcgccttctctttttccatcagct +t----------gctccaccaagtcta-cattccatgccgtcccggtccatatctgggaccggcttatgcttt +ttggtgccaccttagatgaccaggccttttgctgctcgcggcttatgacttacctccgcgggattagctata +aagtgaccgttggtgcacttgtcgccaacgaaggctggaatgcctcggaggatgcgctgaccgctgtgatta +ctgcagcgtatttgaccatttgccatcagcgctacctacgaacacaggccatttctaaaggcatgcgccggc +tggaggttgagcacgctcaaaaatttatcacaaggctatacagctggctgtttgaaaagtc---------ag +gtcgtgattacatccccggtcgccagctcgaattttatgcgcagtgccgccgttggctctcggctggcttcc +atctggaccctagagttctcgtctttgacgaggcagtcccctgc---cgatgccggagcttcctaaagaa-- +----ggtcgctgggaaattttgctgctttatgaagtggttggggcagga------gtgcacctgctttttgg +----------------agccagcggaaggcctggttggggactgtggc--------catgataatgaggctt +atgaggggtctgaggtggaccccgccgagcctgctcaccttgatgtttctggtacttatgcggtccacggcc +gccagcttgaggccctatatagagcacttaatatcccagatgacattgcagctcgtgcgtcacgtctgacgg +ctaccgtggagcttgccgccagcccaggcagactcgagtgccgcacggtgcttgggaataagacttttcgca +catcaataactgacggtgcccatctcgaggcyaacggtcc------------------------tgagcagt +acgtcttgacatttgatgattctcgccaagtgatgggggctgggcctcacagcctcacgtatgaacttgtcc +ctgccggtctacaggttaaaatatcttct-------aatggcttggattgtaccgctatattcccc---cct +ggtggggcgccgagcgctgcaccaggtgaagtggcggctttctgcagcgccctatacaggtacaataggttc +acccagcgccattcgctgaccggtgggctgtggctgcaccctgaggggctccttggcctgttcccccctttt +tccccggggcatctttgggagtctgcaaaccccttttgcggtgagagcacactttatacacgaacttggtct +acatctggtttttctagcgacttctctccacccgaggcggcttatgccgccccagcccctgacat----ggg +gttaccctcgggtgccccctcctccgctagtgatat-----------------ctgggtgtt---------- +---------tccaccgccc----tctgaggggt--------------cggcggttattccaccacccataac +cccggtcggtaagccaactaa---------------------------------------ttcgcc------ +------------------------------------------------------------------------ +-tggtcatac-------------------------------------------------------------- +-------------tacacct----aggccacctgtccgtgagccgtctacaccactaccggccctaacccca +g---------------------------------------------ttagtaagccagctaacccgtctagc +ctcactgctcctaag-------------------------------------ccccccgttcgcgagccgcc +tacaccgcc--------------------------------------atcggcccgcgctcgccggc----- +-------------------ttctttatacatatcctgatggggctaaggtgtatgcaggctctttgtttgag +tcagattgttactggctggtcaatgcatctaaccctggccaccgtcctggtggtggtctctgccatgcattt +taccagcgctttccagagtcgt------ttcatccgaccgattttgtcatgcgcgaggg---tctcgccgca +tataccttgagcccgcgtccgatcatccatgctgtggcccccgactacagggttgagcagaaccccaagagg +ctggaggcggcataccgtgagacctgctcccgcctcggcacagctgcctacccgctactggggtcagggatt +taccaggtccctgtaggtctaagctttgacgcctgggagcgtaatcaccgcccaggcgatgaactttacctt +actgagccagctgccgcc-------------------------------------------------tggtt +tgaggctaataaacctaccca--------------------------------------------------- +------------------------------------------gccagccctaacaatcactgaggataccgc +cc------------gcacggccaaccttgcgcttragatyg------------actccgctactgaggtggg +tcgtgcctgc---gccggctgtactatcaaccccgggattgtccactaccagttcaccgccggggttcctgg +ctccgggaagtctaggtctatacagcaaggggatgttgatgttgtggtcgtgccaactcgcgagctccgtaa +cagttggcggcgtcgtggctttgctgcttttacacctcacacagcagcccgtgttactgccggtcggcgtgt +ggtgatagatgaagcaccttctcttccgccgcacctgctgttgctccatatgcagcgagcctcatcagtcca +tctcctcggcgaccctaatcagatccctgccatcgactttgagcacgccggtttggtcccggcaattcgccc +tgagctagcccctactagttggtggcatgtcacccaccgttgccccgccgatgtgtgtgagctcatacgcgg +ggcttacccaaagattcagacgaccagccgtgtgttgagatctctattctggaatgag------cctgcgat +aggtcagaggctggttttcacgcaggcagctaaggccgccaatcccggtgcaattaccgttcacgaggccca +gggggccacgttcactgagactaccatcatagctacggccgacgctagaggtcttattcagtcctcccgcgc +acatgccatcgttgcacttactcgccatacagaaaagtgcgttattcttgatgctcctggcctattgcgtga +ggtcggcatttctgatataattgttaataacttc------------------------------ttcctggc +tggcg--gcgaggtgggccaccatcgcccttccaccatcccccgtggcaatccagaccagaacttagatac- +-----cctccaagcgttccctccatcctgccaaatcagcgcttaccaccagttggctgaggagctgggtcac +cggccggccccagtggccgccgtcttgcccccctgccctgagcttgaacaggggttactctacatgccgcag +gagctcacggtgtccgatagtgtcctaatttttgaactcacggatatagtgcactgtcgtatggctgccccc +agtcaacgtaaggcggttctttccacactcatcggcaggtatggccgcagaacgaagttgtatgaagcggcc +cattctgacgtccgcgrgtctctagggaggttcatccctactatcggaccggtccaggccaccacttgtgag +ttatatgagttggttgaggccatggtggagaagggccaggatgggtccgctgtgcttgagcttgacctctgc +aatcgtgatgtctcgcgtattacattcttccagaaggattgtaacaaattcacaacaggtgagactattgcc +catggtaaggtgggccagggcatctcggcttggagtaaaaccttctgtgctttattcggcccatggttccgt +gccattgagaaggagattctggctctactcccacccaatattttctatggcgacgcctatgaggagtcagtg +ttctctgcagccatttctggggctggctccagtatg---gtctttgagaatgatttttctgagtttgacagc +acccaaaataatttctctct------------------tggccttgagtgcgttattatggaggagtgtggc +atgccccaatggcttatccgactgtaccatttagttagatcagcctggattctgcaagccccgaaagagtct +ttaaaaggtttctggaagaagcaytcyggygagccyggcactctcctttggaacaccgtctggaacatggcg +atcatagcacactgctatgaattccgtgacctgagagtggcggcgtttaaaggggatgattcaatggttctt +tgcagtgattaccgtcagagccgtaatgcggctactctgatagccggttgtgggttgaaattgaaggttgac +taccggcctataggtttgtatgccggtgttgtagtggttccgggcctcggggcacttcctgatgttgtccgc +tttgcgggtcgattatctgagaagaattggggcccgggccccgagcgcgccgaacagttgcgcctagctgtt +tgtgatttccttcgagggctgacgaatgttgcgcaggtttgcgttgatgttgtgtcccgtg-------ttta +tggggttagtcccgggctggtgcataaccttattggcatgttacagactattgctgatggaaaggcccattt +tactgagactgttaagcctgtgctggatcttacaaattctatcatacagaggttagaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------ttcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttttgcctatgctgcccgcgy---------------------------------- +-caccgg------ccggccagccgtytggcc------------gccgtcgtgggcg-gcgcagcggcggttc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcatatcacaatccggggctggagctcgcccta +gacagccggcccg---------------ccccctcggttcctcctggcgcgaccagtccca----------- +------gcgcccctccgctgctccccgtcgtcgatctacccca---------gctggggctgcgccgctaac +tgctgtttcaccagcgcctgatacggccccagtccctgatgttgactctcgtggcgctatcctgcgccgaca +gtataatctgtccacctctcctttaacttcatctgttgcctctgggactaatcttgtcttgtatgctgcccc +gcttaatcctcttctgcctcttcaagacggcaccaatactcacatcatggcgactgaggcgtctaactacgc +tcagtatcgggttgtccgggctacaatccgctatcgccctttggtgccaaacgctgtcggcggttatgcaat +ttctatttctttctggcctcagactacaactacacccacctctgtcgatatgaactccattacttctactga +tgttaggatcttagttcagccaggcatagcctctgagttggtcattccaagtgagcgccttcactatcgtaa +tcagggctggcgctctgttgagacatcgggtgtggccgaggaagaggcgacatcaggcttggtcatgctttg +tatccatggctcccctgttaactcttatactaacacgccctacactggggcattggggctccttgattttgc +actcgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgttatactagcacagc +ccggcaccgcctgcgccgtggtgccgatgggacggctgagcttacaaccactgcagctacacgttttatgaa +ggacctgcatttca---ccgggacaaat---ggtgtgggtgaggtgggtcgtggtatagctctaacgctatt +taatcttgctgatacacttctcggtgggttgccgacagaattgatttcgtcggccggaggtcaactgtttta +ctcccgcccggttgtctcagccaatggcgagccaactgttaagttatatacctctgtcgagaatgcacagca +ggataagggtattgctataccacacgatatagacttaggggactcccgtgtggttatacaggactatgacaa +ccaacatgaacaggaccggcctaccccgtcgccggccccatcccgtcccttttcagtccttcgggccaatga +tgtcctgtggctctc-----------------------------tctgactgtagctgaatatgac------ +cagactacttatggctcgtcaaccaatcctatgtatgtttcagatactgtcacatttgt---taatgtagcg +acaggcgcccaggctgttgctcgatcccttgactggtccaaggtcactttggatggccgaccgcttactacc +at-----ccagcagtactctaagacattttatgtgt-tgccgcttcgtggcaagctttccttttgggaagct +ggcacgactaag--gctggctacccctacaattacaacactactgctagtgaccagattctgattgagaatg +cagccggtcat------cgtgttgctat-atctacttacactactagtctcgg--------------cgccg +gccctgtgtctgtttc-tgcagtcggcgtccttgccccgcactctgccttagctgtgcttgaagatactatt +gatt---------atcccgcccgtg----cccatactttcgatgatttctgccctgagtgccgcaacc---t +cggcctgcagggctgtgctttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattaa-tt----tc-ccc--ttt------gt +accc-cct---------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444040.1/17243/1-7243 |Hepeviridae isolate HEPAC115, complete genome +--------------------------------------------------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggttcggccgtttttatcccgtattcagactgatatcct +tattaacctgatgcaaccccggcagcttgttttccggcctgaagttctctggaaccatccaatccagcgggt +catacataatgagctggagcaata---ctgccgagccc-gcgctggccgctgtcttgaggtgggcgctcacc +caagatccatcaatgataatcccaatgttctgcaccggtgctttcttcgtccggtcggaagagacgtccagc +gctggtattccgcccccactcgtggtccagcggctaactgccgccgctctgcgctacgcggtttgccccctg +tcgatcgcacatattgcttcgacgggttctcccgctgcgcctttgccgctgagaccgggattgctttatact +cactgcatgacctttggccctcggacgttgcggaggccatggctcgccacgggatgacgcgcttatatgctg +ccctccaccta-ccccctgaggttctgttaccacctggtacttaccacacaacctcctatcttttgattcac +gacggcaaccgtgccgtcgtgacttatgagggtgatactagtgcgggctataatcacgatgtgtctatactt +cgtgcatggatccgcaccactaaaatagttggtgatcacccactggtaatagagagggtccgcgccatcggc +tgtcattttgtcctactccttactgcagcccccgagccatccccaatgccttatgttccgttccctcgctca +acagaggtgtatgttagatccatattcggtcctggt---------gggtcgccttctcttttcccgtcagcc +t----------gctctaccaagtcta-cattccacgccgtcccggtccatatctgggaccggctcatgcttt +ttggtgccaccttagatgaccaggccttttgctgctcgcggcttatgacctatctccgcgggattagctata +aagtgactgttggcgcacttgtcgccaacgaaggctggaatgcttcggaggatgcgcttaccgctgtgatta +ctgcagcgtatctgactatctgccatcagcgctacctacgaacacaggccatttccaaaggcatgcgtcggc +tagaggtcgagcatgcccaaaagtttatcacaaggttatatagttggctgtttgaaaagtc---------ag +gccgtgactacatccccggtcgccagctccagttttatgcgcagtgccgccgttggctctcggccggctttc +atctggaccctagagttctcgtttttgacgaggcggtcccttgc---cgctgccggagctttttaaagaa-- +----ggttgccgggaaattttgttgttttatgaaatggttggggcagga------gtgcacctgttttttgg +----------------agccagcggaaggcctggttggtgactgtggc--------catgataacgaggcct +atgaagggtctgaggtggaccccgccgagcctgcccaccttgatgtctccgggacttatgcagtccacggcc +gtcagcttgaggctctatatagagcgcttaatatcccggatgacattgtggctcgtgcgtcacgtctgacgg +ctactgtagaacttgccgccagcccaggtcgactcgagtgccgtacggtgcttgggaataagactttccgca +catcaataactgatggcgcccatctcgaggctaacggccc------------------------tgagcagt +acgtcctgacatttgatgactctcgtcaggctatgggggctgggccacacagcctcacgtatgaacttgtcc +ctgccggtctgcaagttaaaatatcttct-------aatggcttggattgtaccgctatattcccc---cct +ggtggggcaccaagcgcagcaccaggtgaagtggcggctttctgtagcgccctatacaggtacaataggttt +acccagcgccattcgctgaccggtgggctgtggctgcaccctgaggggcttcttggcctgttcccccctttc +tctccggggcacctttgggagtctgcaaaccccttttgcggagagagcacactttatacacgaacttggtct +acatctggtttttctagcgacttctccccacccgaggcgacttatgccgctccagcacccgacat----gga +gccaccttcgggtgctccctcgtccgctagtgatat-----------------ctgggtgtt---------- +---------tccacagccc----tctgagaggt--------------cggcgatcgccccgccacccatgac +cccggttagtaagccagctaa---------------------------------------cccgcc------ +------------------------------------------------------------------------ +-agttcttgc-------------------------------------------------------------- +-------------tacacct----gggccgcctgtccgtgagccgcctacaccaccgccggctctaatctcg +g---------------------------------------------tcagtaagccagctagcccgtctagc +ctcaccacatataag-------------------------------------cctcctgtccgtaagccgcc +tacaccacc--------------------------------------accggcccgcacccgtcggc----- +-------------------tcctttatatatatcctgatggggccaaggtgtatgcaggctctttgtttgag +tcagactgtgattggctggttaatgcakctaaccctggccaccgtcctggtggtggtctctgccatgcattt +taccagcgcttcccggagtcgt------tccatccgactgattttgtcatgcgtgaagg---tctcgctgca +tatactctgagcccgcgtccgatcattcatgcagtggcccccgattatagggttgagcagaaccctaagagg +ctggaggcggcatatcgtgagacctgctcccgcctcggcacagccgcttatcctctattggggtcgggtatt +taccaggtccctgtgagtttaagttttgacgcctgggagcgtaaccaccgcccaggcgatgaactgtacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacaccgc +cc------------gcacggctaaccttgcgcttgagattg------------actctgctactgaggtggg +ccgtgcttgc---gccggctgtactattaaccccgggattgtccattaccagttcaccgccggggtccctgg +ctccgggaagtctagatcyatacagcagggggatgtygatgtcgtggtcgtgccaactcgtgagcttcgtaa +cagttggcgacgccgcggctttgctgcttttacaccccacacagcagctcgtgttactgccggccggcgtgt +agtgatagatgaggcaccttcgcttccaccgcacttgctgctgctccatatgcagcgagcctcatcggtcca +tctccttggtgaccccaaccagatccctgccattgactttgagcacgccggtctggtcccagcgattcgccc +tgagctagctcccactagttggtggcatgtcacccaccgctgccctgccgatgtatgtgagctcatacgygg +ggcctaccccaagatccagacgacaagccgtgtgttgagatctttattttggaacgag------cctgcagt +gggtcagaggctggttttcacgcaggcagccaaagcggccaaccccggcgcaatcaccgtccatgaggccca +gggtgccacgttcactgagactactatyatagccacggccgatgctagaggtcttattcaatcttcccgcgc +acaygccatcgttgcgcttactcgccatacagagaaatgcgtcattytcgacgctcctggcctgctgcgtga +ggtcggcatctctgatataattgttaataacttt------------------------------ttcctggc +tggtg--gtgaagtgggycaccaccgcccttctattataccgcgcggcaaccaagatcagaacttagacac- +-----cctacgggcgtttcctccgtcctgccagatyagcgcctaccaccaattggctgaggagctgggccac +cggccggcccctgtggccgccgtcctgcccccytgccctgrgcttgagcaggggctactttacatgccgcag +gagcttacggtgtccgatagcgtcctaatttttgaactcacggacatagttcactgccgtatggccgccccc +agtcagcgtaaggcggtcctttctacgctcgtcggcaggtacggccgccgaacgaagctgtatgaagcggcc +cattctgatgttcgtgagtctttaggaaggttcatccctactatcggcccggtccaggccaccacatgcgag +ttatatgagctggttgaggccatggtggagaagggccaggacggctccgccgtgcttgagctcgacctctgc +agccgtgatgtctcgcgtattacattcttccagaaagattgtaataaatttacaacaggtgagaccattgcc +cacggcaaggtgggccagggcatttcggcttggagtaagactttctgtgctttattcggcccgtggttccgt +gctattgagaaggraatcctggctctgcttccacccaacattttttatggcgatgcctacgaggagtcagtg +ttttctgcagccatttctggggctggctccagtatg---gtctttgagaacgatttttctgagtttgatagc +acccaaaacaatttttctct------------------tggccttgagtgtgtcattatggaggagtgtggc +atgccccagtggcttatccgactgtatcatttagttagatcagcctggactctgcaagccccgaaagagtct +ttgaagggtttctggaagaagcattcyggcgarccyggcaccctcctttggaacaccgtctggaatatggcg +atcatagcacactgctatgaattccgtgatttgagggtggcagcgtttaagggggatgattcagttgttctt +tgcagtgattaccgccagagccgtaatgcggccaccttgatagccggctgtgggttgaaattgaaggtygat +taccggcctataggtttgtatgccggcgttgtagtggctccgggyctcggggcacttcctgatgttgtccgg +ttcgccggtcgattatctgagaagaactggggtccgggccccgagcgcgccgaacagttgcgcctagcagtt +tgtgatttyctccgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggrgttagccccgggctggtgcataaccttattggcatgctacagactattgctgatggaaaggcccactt +tactgagactgtcaaacctgtgctggatcttacaaactctatcatacagaggttggaatgaataacatgtt- +c----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gctgctgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttygcccccgatgtyttatcacaacccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccycccgtcgtcgatctacccca---------gccggggctgcgccgttaac +tgctgtttcaccagcgcctgacacggccccagtccctgatgttgactctcgtggtgctatcttgcgccgtca +gtataatttgtccacctcwcctttaacttcwtctgttgcttctggaactaaccttgtcttgtatgccgcccc +gcttaatcctcttctgcctctccaagacggcaccaatactcacatcatggcgactgaggcatctaattacgc +tcagtatcgggttgtccgggctacaatccgttatcgccctttggtgccgaatgccgtcggyggttatgcaat +ttctatttccttctggcctcagactacaactacacccacctctgttgatatgaattccattacttctactga +tgtyaggattttagtccagcctggcatagcctctgagttggtcatcccgagtgagcgccttcactaccgtaa +tcaaggctggcgctctgtygagacatcgggtgtggccgaggaggaggcgacatcaggcctggtcatgctttg +tattcatggctcccctgttaattcctataccaacacgccttatacyggggcattagggctccttgactttgc +actcgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgatacactagtacagc +ccggcaccgtttgcgtcgcggtgccgatgggacagccgagcttacaactactgcagccacacgttttatgaa +ggacttgcatttta---ctggractaat---ggtgttggtgaggtrggccgcggtatagccctaacgctatt +taatcttgctgacacacttctcggcgggctgccgacagaattgatttcgtcggctggaggtcaactgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggcattgctataccacatgatatagacttaggtgattcccgcgtggttatacaagactatgacaa +ccaacatgagcaggaccggcctaccccgtcgccggccccgtcccgccccttctcagtccttcgagccaatga +tgtcctgtggctctc-----------------------------tctgactgcggctgaatatgat------ +cagaccacctatggctcgyctaccaaccccatgtatgtttcagatacagtcacatttgt---taatgtggcg +acaggtgcccaagccgttgcccgatcccttgattggtccaaagtcactttggatggycggccgctcactacc +at-----ccagcagtactccaagacgttttatgtac-tgccgcttcgtggcaagctttccttttgggaggct +ggtaccactaag--gctggctacccttacaattatgacactactgccagtgaccagattctgattgagaatg +cagccggtcac------cgcgttgccat-atctacttacacccatagtcttgg--------------tgccg +gccctgtgtctgtttc-tgcggtcggtgttcttgccccgcactctgctttagctgtgcttgaagatactatc +gact---------atcctgcccgtg----cccatactttcgatgatttctgccctgagtgccgcaatc---t +tggcttgcagggctgtgctttccagtc--------tactgttgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattaa-tt-----c-cccc-cc--------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444042.1/17219/1-7219 |Hepeviridae isolate HEPAC97, complete genome +-----------------------tcgctctaga-----gtgtg-------------a-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcatcactactgccattgag---caagctgctctggc +cgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +cattaatttgatgcaaccccggcagctggttttccgacctgaagtgctctggaatcatcctatccagcgggt +tattcataatgagttagaacagta---ctgccgggccc-gggctggtcgctgtttagaggttggggcccatc +caagatccatcaatgacaacccgaatgttttgcatcgctgcttcctacgaccagttggcagagatgttcagc +gctggtactctgcccctacccgtggccctgcggccaattgccgccgctccgctttgcgtggcctcccacccg +ttgaccgcacctactgttttgatggattctctcgttgctcgtttgctgcggagactggtgtcgccctctatt +cattacatgacctctggccggccgatgttgcggaggccatggcccgacatgggatgacacgcttatatgctg +cactacatctc-ccccctgaagtattactaccacctggtacttaccacacaacttcataccttctcattcac +gacggggaccgtgccgttgtgacttatgagggtgacactagtgcaggttacaaccatgatgtttctatactc +cgcgcatggatccgcacaactaagatagttggcgaccatccgctggtgatagagcgtgtgcgggctattggc +tgccactttgtgctgctgctcactgcggcccctgagccgtcaccaatgccttatgtcccatacccccggtcg +acagaggtgtatgttcgttccatatttggccctggc---------gggtccccgtccctgtttccatcagct +t----------gctccacaaaatcca-catttcatgccgtcccagttcatatttgggaccggctcatgctct +ttggtgccaccctggacgatcaggcgttttgctgctcacggcttatgacttaccttcgtgggattagttaca +aggttactgtaggtgcccttgttgctaatgaagggtggaatgcttcggaggacgctcttaccgctgttatca +ccgcagcgtacttgaccatttgtcatcagcgttacctccgtactcaagccatatccaagggcatgcgccggc +tggaggttgagcatgcccaaaaatttattacaagactctatagttggctgtttgagaagtc---------tg +gccgtgactacatccccggccgtcagctccagttctatgcacagtgccgccgctggttatcggcgggtttcc +acctcgacccaagggtgcttgttttcgatgagtctgctccctgc---cgttgtaggacgtttcttaagaa-- +----ggttgcaggtaagttctgctgttttatgaagtggctggggcagga------gtgcacctgcttcctgg +----------------aaccggctgagggcctggttggtgaccacggc--------cacgataatgaggcct +atgagggttctgaggtcgaccaggccgagcccgcccatcttgatgtttctgggacttatgccgtccatggga +gccaacttgaggccctgtatagggcgcttaacatcccgcacgatattgtcgctcgagcctcccgtttaactg +ccactgttgaacttactgcaggtccagaccgtttggagtgtcgcactgtgctcgggaataagaccttccgga +caacggtggttgatggcgctcatcttgaggcgaatggccc------------------------cgagcagt +atgtcctttcgttcgacgcctcctgccagtctatgggggccgggccgcataacctcacctatgagctcactc +ctgctggtttgcaggttaagattttatcc-------aatggcctggattgcactgcgacattcccc---ccg +ggcggagcccctagtgcagctccgggggaggtcgcagctttctgcagtgccctctataggtacaacaggttt +acccagcgacattcgcttacaggcggtttgtggctgcatcctgaggggctattgggaatcttcccccccttt +tcccccgggcatctctgggagtccgctaatcctttttgtggggagggaactttgtacacccggacttggtca +acatctggtttctctagtgatttttccccccctgaggcggctgccgctgtgccggccgctgccac----agg +gttgctcc---accctacaacccctgttagtgacat-----------------ctgggtgtt---------- +---------gccgccaccc----tctgaggggt--------------ctcaggttgatgcagcgcctgctcc +tccag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tccctgagcccgttcaaccgcccggc +cctgctaggccgaag-------------------------------------gcccccgtgtgtaagccacc +aacaccacc--------------------------------------acctccgcgtacccgccgcc----- +-------------------tcctctacacttatccggatggggcgaaggtgtatgcggggtcactgtttgag +tcagactgtgattggctggtcaatgcgtcgaatcccggccatcgtcccggaggtggcctttgccatgctttt +taccaacgctaccccgagtcgt------ttcacccaactgagttcattatgcgtgacgg---tcttgccgca +tatactctgactcctcggcctattatccatgcggtggctcccgattatagggttgagcagaacccgaagagg +cttgaggcagcataccgagagacctgctcccgccgtggcaccgccgcttacccacttctcggctcaggtata +taccgagttcccgttagcctcagctttgatgcttgggagcgtaaccaccgccccggggatgagctttacttg +actgatctcgccgctacc-------------------------------------------------tggtt +cgaggccaacaagccagcaca--------------------------------------------------- +------------------------------------------accggcccttacaataactgaagatacagc +cc------------gtacagccaacctagcactagagatcg------------acgctgctacggaggttgg +ccgggcttgt---gccggttgtacagttagccctggggttgtgcactatcaatttaccgccggggttccagg +ttcagggaagtcgcggtctatacagcaaggggaygtygatgtggtggttgttcccactcgggagcttcggaa +tagttggcgccgccggggttttgcagccttcacgcctcacacggcggcccgcgttaccacgggtcgccgtgt +cgtgattgatgaggccccatccctcccgccgcatctactgcttttacacatgcagcgggcctcgtcggtcca +ccttctcggcgacccaaatcagatccccgctatagactttgagcatgccggtttggtccctgcaatacgccc +cgagcttgcacccaccagctggtggcatgttactcatcgctgccccgctgatgtgtgcgagcttatacgcgg +ggcctatcccaaaatccagactactagccgcgtgctgcggtctttattctggaatgag------cccgccat +tggccagaagttagtctttacacaggccgctaaggctgccaaccccggtgcgattacagtccatgaggccca +gggcgccactttcacggagactacaattatagccacggccgatgccagggggctcatccaatcttcccgagc +tcacgccatagtcgcacttacccgccacacagagaagtgcgttatccttgatgcccccggtttgttacgtga +ggtcggtatatctgatataattgtcaacaatttc------------------------------ttccttgc +cggtg--gggaagtgggtcaccaccgcccctctgtgataccccgcggcagtcctgaccagaacctcgcgac- +-----attacaggcttttccaccctcctgtcagatcagtgcttatcatcagttagctgaggagctgggccac +cgcccggcccccgtcgctgccgtcctgcccccctgccctgaactcgagcagggcctgctgtatatgccacaa +gagctcacggtgtctgatagcgtgttggtctttgaactcacggacatagttcattgccggatggctgcccct +agccagcggaaggccgtcctatcgacgcttgtaggtaggtatggccgccggacgaagctgtatgaggcggct +cactccgatgtccgtgagtccctgacaagattcatccccaccatcgggcccgttcaggcaactacgtgtgag +ctatacgaactggttgaggccatggtggataagggtcaggacggctctgccgtacttgagcttgatctttgc +aatcgtgatgtatcgcgtattacattcttccagaaagactgtaacaagttcaccacaggggagaccattgcc +cacggtaaggtcggccaaggcatttcggcttggagcaagaccttctgtgccctctttggcccgtggtttcgt +gctattgaaaaagaaatactggccctgctcccgcccaacatcttctacggcgacgcatatgaagagtctgtg +tttgctgccgccgtgtctggggcaggctcatgcatg---gtatttgagaatgatttctcagagtttgatagc +actcaaaataatttctccct------------------tggccttgagtgtgtagtcatggaggaatgcggc +atgccccagtggctaattcggttgtaccacttggttcggtcagcctggattctacaggcgccgaaggagtct +cttaaagggttttggaagaagcattcyggygagcccggcaccctcctttggaacaccgtttggaatatggcg +atcatagcccattgctatgagtttcgtgatcttagggcagccgccttcaagggagatgattcggtggtcctc +tgtagtgactaccgtcaaagccgtaacgcagcggccctgattgcaggttgcgggctcaaactgaaggtcgat +tatcgccctatcgggttgtatgccggtgtggtggtggcccccggcctggggacgctacccgatgtagtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggccgagcagctgcgtcttgctgtt +tgtgattttcttcgagggctgacgaatgttgcgcaggtgtgtgttgatgttgtatcccgag-------ttta +cggggttagccctgggctggtacataaccttattggcatgttgcaaaccattgctgatggtaaggcccactt +tacagagactgttaaacctgtgcttgacctcacgaactctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcctcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagtcgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccaccgatgtcatttcgcaacccggggctggagctcgccctc +gacagccatcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccacgtcgtcgacctgcccca---------actggggctgcgccgctgac +tgctatatcacctgctcctgatgcggcccccgtgcctgatgttgattctcgtggcgctatattgcggcgcca +gtataatttatctacatccccactcacatcatccgttgcttcgggtactaatctggttctttatgctgcccc +gctaaatcccctgttacctcttcaggatggcactaacacccacatcatggctactgaggcgtccaactatgc +ccagtaccgggttgtccgagctacgatccgttacaggccgttggtgccgaatgctgtcggtggctatgcaat +ctccatctcattttggcctcagaccaccaccacccctacgtctgttgacatgaattctatcacttccactga +tgttaggatcctagttcagcccggtattgcttctgagttagttattcctagtgaacgcctccactaccgtaa +ccaaggttggcgctctgtggagacctcgggtgtggccgaggaggaggccacttctggtttggtgatgctatg +catccatggttcccccgttaactcctacaccaataccccctataccggggcgcttgggctccttgactttgc +tctagagcttgagtttaggaacttgacacccgggaacactaacacccgtgtttcccggtatacaagcactgc +ccgtcatcggctgcgccgcggcgccgatggcaccgctgagcttaccaccacagcggctacacgtttcatgaa +ggacctgcacttca---ccggcacgaat---ggggtcggtgaggtgggccgtggtattgctcttacactctt +taatcttgctgacacgctcctcggtggtctgccgacagaattaatttcgtcggctgggggacagttgttcta +ttcccgccccgtcgtctcagccaatggcgagccggctgttaagttatatacatctgtggagaacgcgcagca +ggataaaggtattgctattccacatgacatagatttaggtgactctcgtgtggttattcaagattatgataa +tcagcacgagcaggatcggcccaccccttcgcccgccccatctcgccctttttcggttcttcgtgctaatga +tgttctatggctttc-----------------------------tcttaccgctgccgagtatgac------ +cagactacatatgggtcgtccaccaacccaatgtatgtctcagatactgtcacatttgt---caacgtggct +acaggggcccaggctgttgcccgctctcttgactggtctaaagttactttagatggtcgcccccttactact +at-----tcagcagtattccaaaacattttatgttc-tcccgcttcgcgggaagctatccttttgggaggct +gggacaactaaa--gctggttatccttataattataacacgactgctagtgaccagattttaattgaaaatg +ctgctggtcac------cgtgttgccat-ctctacttatactaccagccttgg--------------cgctg +gccctgtgtcagtttc-tgcagtcggtgtgttagccccgcattcggctcttgcagttcttgaggatactact +gact---------accctgctcgcg----cccacacttttgatgatttctgcccggagtgtcgcgccc---t +tggtttgcaggggtgtgccttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattaa-tt----t--cctt---t------gt +gccc-cct--------tc-atag-tttct----gc-ct---t-----------------att-t-------c +ttttttct----gc----------------tg-tcgcgctccc----------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444043.1/17229/1-7229 |Hepeviridae isolate HEPAC162, complete genome +------------------------------------------g-------------c-----ggtcgaygc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaactctgccctggcgaatgctgtggtggttcggccgttcttatctcgtgtacaaactgagattct +tattaatttgatgcaacctcggcaactggttttccgacctgaagtgctctggaatcatcctattcaacgggt +tatccacaatgagttagaacagta---ctgccgggccc-gggccggccgttgcttagaggttggcgctcacc +caagatccatcaatgacaacccaaatgttcttcacaggtgttttctacgaccagtcgggagggatgttcagc +gttggtactctgcccccacccgtggccctgcggccaattgccgccgcaccgctctacgtggcctcccccccg +ttgaccgcacctactgttttgatgggttttcccgctgctcgtttgccgcagaaactggtgttgccctctact +ctttgcatgacctctggccggccgatgttgcagaggccatggctcgacacggcatgacacgtctatatgctg +cactacatctt-ccccctgaggtactactaccacccggtacctatcatacaacttcataccttctgatccac +gacggcgatcgcgccgttgtaacctacgaaggtgacactagtgcaggttacaaccatgatgtttccatactt +cgtgcatggatccgcacaaccaagattgttggtgatcatccactggtgatagagcgtgtacgggcaattggc +tgccattttgtgctcctgcttactgcagctcctgagccgtcaccaatgccctatgtcccgtacccccggtcg +acagaggtgtatgtccgctctatctttggccctggt---------gggtccccatctttgtttccatcagct +t----------gctctacgaaatcca-catttcatgctgtcccggttcacatctgggaccgactcatgctct +ttggcgccactttggacgatcaggcattctgctgctcacgtctcatgacctatctccgcgggatcagctaca +aggtcactgttggtgccctcgttgccaacgaggggtggaacgcctcggaggacgctcttaccgctgttatca +ccgcagcgtacttgactatctgccaccagcgttacctccgcacccaggctatatccaagggcatgcgccgat +tggaggttgagcatgctcaaaaatttattactagactttatagctggctgtttgagaagtc---------tg +gtcgtgactacatccccggccgtcagctccagttctatgcacagtgccgccgctggttatctgcgggcttcc +accttgaccctagggtgcttgtttttgatgaatctgtgccctgc---cgttgtaggacgtttcttaagaa-- +----ggttgcgggcaagttctgctgctttatgaagtggctggggcagga------gtgcacctgctttctgg +----------------aaccggcagagggcctggtcggcgaccacggc--------catgataatgaggcct +atgagggctctgaggttgatcaggctgagcccgcccaccttgatgtctctgggacttatgccgtccatgggc +gccaacttgaggccctgtatcgggcgcttaatgtcccgcatgacattgctgctcgagcttcccgtttaactg +ctactgtcgagctcgttgcaggtccagaccgcctggagtgtcgtaccgtgctcgggaataagacctttcgga +caacggtggttgatggtgcccaccttgaggtgaacggccc------------------------tgagcagc +acgtcctttcgttcgatgcctcccgccagtctatgggggccgggtcgcataatcttacttatgaacttactc +ctgcaggcctgcaagtcaagatttcatct-------aatggtttggactgtactgcaacattcccc---ccg +ggcggcgcccctagcgctgatccgggggaggtagcggccttttgcagcgccctttacaggtataataggttc +acccagcgacattcgcttacaggtggtttgtggttgcatcctgaggggttgctgggtatctttccccctttt +tctcccgggcatatttgggagtccgccaaccccttctgtggagagggaactttgtatactcgaacttggtca +acatctggtttttctagtgacttctcccccccggaaccagctgtcgctgcgccggctgcctctcc----gag +gttacccc---cccccacaccccctgttagtgacat-----------------ttgggtgtt---------- +---------gccgccgccc----tctgaagaac--------------tccaggttgacgcagcgcctgccgc +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctcctgagtctgttcaatcgtccggt +cctgtcgagccgaag-------------------------------------acccccacgcgtaagccacc +aacaccacc--------------------------------------ggccccgcgtactcgccgcc----- +-------------------tcctttatacttatccggacggggcaaaggtgtacgcggggtcactgttcgag +tctgactgtgactggctggttaatgcatcgaaccctggccatcgtcctggaggcggcctttgccatgccttt +taccaacgctatcccgagtctt------tctacccaactgagtttattatgcgcgacgg---tcttgccgca +tacactttaacccctcggcctattatccatgcagtggcccctgattatagggttgagcagaatccaaagagg +cttgaggcagcatatcgtgagacctgctcccgccgcggtaccgccgcttacccactccttggctcgggcata +tatcaagtccccgtcagcctcagctttgacgcttgggagcgcaatcaccgccccggggacgagctttacttg +accgatcttgccgctgcc-------------------------------------------------tggtt +tgaggccaataagccaaccca--------------------------------------------------- +------------------------------------------accagcccttacaataactgaggatacagc +tc------------gcacggccaacctagccctggagatcg------------atgctgctacagaggttgg +ccgcgcttgt---gccggctgcacagttaggcccgggattgtgcactatcaatttactgctggggtcccggg +ctcggggaagtcgcggtccatacagcagggggatgtygatgtggtggttgtccccactcgggagcttaggaa +cagttggcgtcgccggggctttgcagcttttacacctcacacggcggcccgagtcactacgggccgtcgtgt +tgtgattgatgaggccccgtccctcccaccacacttgctgctgctgcatatgcagcgggccgcgtcagtcca +tcttcttggcgacccaaaccagatccccgccatagacttcgagcatgccggtcttgtccccgcaatacgccc +cgaacttgcgcctaccagctggtggcatgtcacccatcgttgccccgctgatgtatgcgagcttatacgcgg +ggcttaccctaaaatccagaccactagccgtgtgttgcggtctctattctggaatgag------cccgccat +cggccaaaagttggtttttacgcaagccgctaaggctgccaaccctggtgcaattacagtccatgaggccca +gggtgccacctttacggaaaccacagtcatagccacggccgatgctagggggcttatccaatcctcccgagc +tcacgctatagtcgcactcacccgccacacggagaagtgcgtcattcttgacgcccccggcctgctacgtga +ggtcggcatatcagatattattgttaacaacttc------------------------------tttcttgc +tggcg--gggaggtgggccatcatcgcccctctgtgattccccgcggtagtcctgaccagaacctcgcgac- +-----attacaggcttttccaccttcctgtcagattagtgcttaccaccagttagccgaggaattaggccac +cgcccagcccccgtcgccgctgttctgcccccctgccctgaacttgagcagggcttgttgtacatgccgcag +gagcttacggtgtctgatagtgtgctggtctttgaactcacggacatagtccactgccggatggctgctcct +agccagcggaaggccgttctatcgacgcttgtgggcaggtacggtcgtaggacgaagctgtatgaagcggct +cactctgatgtccgtgagtccttggctagatttattcctaccattgggcccgtccaggccactacgtgtgag +ttatatgagctggttgaggccatggtggagaagggtcaggatggctctgccgtgctcgagctcgacctttgc +aatcgtgatgtatcgcggataacgttcttccagaaagattgtaacaagttcaccacaggggagaccatcgct +cacggtaaggtcggccagggcatttcggcttggagtaagaccttctgtgctctgtttggcccgtggtttcgt +gctatcgaaaaagagatactggccttgctcccgcccaacattttctacggtgatgcatatgaggagtccgtg +tttgctgctgctgtgtctggggcaggttcatgcatg---gtatttgagaatgatttctcagagtttgatagc +acccaaaacaacttctccct------------------tggcctcgagtgcgtagttatggaggaatgtggc +atgcctcagtggctaatccggttgtaccacctggtccggtcggcctggatcttacaggcgccgaaggagtct +cttaaaggattttggaagaarcaytccggtgagcccggcaccctcctttggaacaccatctggaatatggcg +atcatagcgcactgctatgagtttcgtgattttagggttgctgctttcaagggggatgattcggtagttctt +tgtagtgactaccgtcagagtcgcaatgcagcggccctgatcgcaggttgtgggctcaagctgaaggttgac +taccgccctatcgggctgtatgcaggtgtggtggtggcccccggtctggggacgctacccgatgtagtgcgc +tttgccggccgactgtccgagaagaactggggccccgggcccgagcgggccgagcagttgcgccttgctgtt +tgtgatttccttcgagggttaacgaatgttgcgcaggtatgtgttgatgttgtatcccgag-------ttta +tggagttagccctggactggtacataaccttatcggtatgctgcaaaccattgctgatggcaaggcccactt +tacagagactgttaaacctgtgcttgacctcacaaattctatcatacagcgggtagaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgcgccctcgggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgcttcgcaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggttcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccacgtcgtcgatctgcccca---------actggggctgcgccgttgac +cgccgtatcacctgcccccgatacagcccctgtgcctgatgttgattcgcgcggcgctatattgaggcgcca +gtataatctgtccacatctccactcacatcatctgttgcttcgggtaccaatctggttctttacgctgcccc +gcttaatccattgctaccccttcaggatggcactaacacccatattatggccactgaggcgtctaactatgc +ccagtatcgggtcgtccgagccacgatccgttacaggccactggtgcctaatgctgttggtggttatgcaat +atctatttcattttggccccagactactaccacccctacgtcggttgatatgaattctattacttctactga +tgttaggattctagtccagcccggtattgcttccgagctggttattcctagtgagcgtctccattatcgtaa +tcaaggttggcgctctgtggagacctcgggtgtggctgaggaggaggctacttctggtttggtgatgctttg +tatccatggctcccctgttaattcttatactaataccccctacactggggcgcttgggctccttgattttgc +tttagagcttgagtttaggaacttgacacccgggaacaccaacacccgcgtttcccggtatacaagcacggc +ccgtcatcggctgcgccgtggtgctgatggcaccgccgaacttaccaccacagcggccacgcggttcatgaa +ggaccttcatttca---ccggaacaaat---ggggtcggtgaggtcggccgtggtattgctctcacactctt +taatcttgctgacacgcttctcggtggtttgccgacagaattaatttcgtcggctgggggacagctattcta +ctcccgccccgtcgtctcagccaatggcgagccgactgttaagctatatacatctgtagagaatgcgcagca +ggataaggggattgctattccacatgatatagacctgggtgactcccgtgtggttattcaggactatgataa +tcagcatgagcaagatcggcccaccccttcgcctgccccatcccgccctttctcggttcttcgtgctaatga +tgtcctatggctatc-----------------------------tcttaccgctgctgagtacgat------ +cagaccacatatgggtcgtctaccaatccaatgtacgtctcagatactgtcacatttgt---taacgtggct +acaggggcccaggctgtcgcccgctctcttgattggtctaaagttactctggatggtcgccctctcacgacc +at-----ccagcagtactccaaaacattttatgttc-tcccgcttcgtgggaagttatccttctgggaggct +gggacaactaag--gctggctacccctataattataatacaactgctagtgatcagatcttgattgaaaatg +cagccggtcac------cgtgttgctat-ttccacctacaccaccagcctgag--------------cgctg +gccctgtgtcaatttc-tgcggtcggtgtgttagccccacattcggccctcgcagtccttgaggatactatt +gact---------accctgctcgcg----ctcacacatttgatgatttctgtccggagtgtcgcgctc---t +tggtttgcaggggtgtgccttccagtc--------cactgttgctgagcttcagcgcct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattaa-tt----t--ccct-ttt------gt +gccc-cct--------tc-atag-ctttt-------gc---t----------------tatt-t-------c +ttttttct----gc----------------cgtccccgccccccc---------------------ggaaaa +aaaaaaa---------------aaaaaaa------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444045.1/17304/1-7304 |Hepeviridae isolate HEPAC113, complete genome +------------c-acgtcgtatatcgag---------------------------------tgtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatctcgtgttcaaactgatatcct +tattaaccttatgcaacctcgacagcttgtgttccggcctgaagtcctctggaaccatccgatccagcgagt +catacataacgagcttgagcagta---ctgccgagccc-gcgccggccgctgtcttgaggtgggcgctcacc +cgagatctattaatgacaaccccaatgttctgcaccggtgttttctccgcccggttggaagagacgtccagc +gttggtattccgctcccactcgtggcccagcggccaactgccgccgttctgcgctacgcggtttgccccctg +tcgatcgtacatattgtttcgacgggttttcccgctgcgcctttgccgctgagaccgggatcgctttatact +cactgcatgacctttggccctcggacgttgcagaggctatggcccgccacgggatgacgcgcttgtatgctg +cccttcacctc-ccccctgaggttctgttaccacctggtacttatcacacaacctcctatcttctgattcat +gacgggaatcgtgccgtcgtgacttatgagggggatactagtgcgggctataaccacgatgtatctatactt +cgtgcatggattcgcactactaaaatagttggagatcacccattggtaatagagagagtccgcgccattggc +tgccattttgttttacttctcactgcagcccccgaaccatccccaatgccttatgtaccgtatccccgctca +acagaggtgtatgttcggtccatatttggtcctggt---------gggtcgccctctcttttcccgtcagcc +t----------gctctaccaagtcta-cattccatgctgtcccagtccatatctgggaccggctcatgcttt +tcggtgccaccttagatgatcaggccttttgctgctcgcggcttatgacctacctccgtgggattagctata +aagtgaccgttggcgcgcttgtcgccaacgagggctggaatgcctcggaggatgcgcttaccgctgtgatta +ccgcagcgtacttgacgatctgtcatcagcgctacttacgaacacaggctatctctaaaggcatgcgtcggc +tagaagttgagcacgcccaaaagtttattacaaggttatatagctggttgtttgaaaagtc---------ag +gccgtgattacatccccggccgccagcttcagttttatgcgcagtgccgccgctggctctcggctggctttc +atctggaccccagagttctcgtttttgacgaggcggtcccctgc---cgctgccggagtttcttaaagaa-- +----ggttgctggtaaattttgttgtttcatgaaatggctggggcagga------gtgcacctgctttttgg +----------------agccggcagaaggcctggttggtgactggggc--------catgataatgaggcct +atgaggggtctgaggtggaccccgccgagcctgcccaccttgatgtctctgggacctatgcggtttacggcc +gtcaacttgaggctctatatagagcacttaatatcccggatgatgttgcggcccgtgcgtcacgtttgacgg +ccactgtggaactcgccgccagccctggccgacttgagtgtcgtaccgtgcttggaaataagacgttccgta +catcaataactgatggcgcccatcttgaagccaatggccc------------------------tgagcagt +acgttttgacatttgacgactctcgtcaggcgatgggggccggacctcacagcctcacgtatgagcttgtcc +ctgccggcctgcaggttaaaatatcttct-------aatggcctggattgcaccgctatattccct---cct +ggtggggcgccaagcgctgcaccaggtgaagtggcggccttttgcagcgccttatacaggtacaacaggttc +acccagtgccattcactgaccggtgggctgtggctgcatcctgaggggcttcttggcctgttcccccctttc +tctccagggcatctctgggagtccgctaaccctttctgcggtgagagcacactatatacacgaacttggtcc +acgtctggtttttctagtgacttctctccacccgaggccgcttatgtcgccccggcccctgacat----ggg +gccaccctcgggtgctccctcgtccgctagtgatat-----------------ctgggcgtt---------- +---------tccaccgccc----tctgaggagt--------------cggcgattgtttcgccacctgtaac +ttcggtcagcaagccaactaa---------------------------------------tccacc------ +------------------------------------------------------------------------ +-tggtcctat-------------------------------------------------------------- +-------------tacatcc----aggccacccgctcgtgagtcgcctacaccatcgctggccctagccccg +g---------------------------------------------ccagtaagccaatcggtccacctagt +cttactacacctagg-------------------------------------ccccctgtccgtgagccgtc +tacaccatc--------------------------------------accggcccgcacgcgtcggc----- +-------------------tcctttatacatatcctgacggggccaaggtgtatgcaggttctttgtttgag +tcggattgtgattggctggttaatgcatctaatcccggccaccgccctggtggcggtctttgtcatgcattt +taccagcgcttcccggaggcct------tccatccgactgattttgttatgcgcgaagg---ccttgccgca +tatactttgagcccgcgtccgatcattcatgctgtggcccccgattacagggttgagcagaacccaaagagg +ctagaggcggcgtatcgtgagacctgctcccgcctcggcacagctgcctacccactactggggtcagggatc +taccaggtccctgtaggcttaagctttgatgcctgggagcgtaaccaccgcccaggcgatgaactttacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagccggcaca--------------------------------------------------- +------------------------------------------gccggccctaacaattactgmggacactgc +tc------------gcacagctaaccttgcgcttgagatcg------------actctgctaccgaggtggg +tcgtgcttgc---gccggctgcactattaatcccgggatcgtccactatcagtttaccgccggggttcctgg +ctccgggaagtccaggtctatacagcagggggatgtygatgtcgtggttgtcccaactcgcgaacttcgcaa +cagttggcggcgccgcggctttgctgcttttacaccccacacagcagctcgtgttactgccggccggcgtgt +ggtgatagacgaggcaccctcgcttccaccgcacctgctgttgctccatatgcagcgagcctcatcggtcca +tcttcttggtgaccccaaccagatccctgctattgattttgagcacgccggtttggttccagcgattcgccc +cgagctagcccctactagttggtggcatgttacccaccgctgccccgccgatgtgtgtgagctcatacgcgg +ggcttacccaaagatccaaacgaccagccgtgtgttgagatctttattttggaatgag------cctgcggt +gggtcagaggctggttttcacgcaggcagccaaggccgccaaccccggcgcaattactgttcatgaggccca +gggcgctacgtttactgagaccaccatcatagccaccgccgatgctagaggccttattcaatcttcccgcgc +acacgccatcgtggcgctcactcgccacaccgaaaaatgcgtcattcttgacgctcctggcctactgcgtga +ggtcggcatttccgatataattgttaataacttt------------------------------ttcttggc +tggtg--gtgaagtgggccaccatcgcccttctatcataccccgtggtaacccagaccagaatttagatac- +-----cctgcgagctttcccaccgtcctgccaaattagtgcctaccaccagctggctgaagagctgggccac +cggccggccccagtggccgctgtcctgcctccctgccctgagcttgagcaggggttactctacatgccgcag +gagcttacggtgtccgacagcgtcctaatctttgaactcacggacatagttcattgtcgtatggctgcccca +agtcaacgcaaggcggtcctttccacgctcgtcggcaggtacggccgccgaacgaagctgtatgaagcggcc +cattctaatgtccgtgagtctttagagaggttcatccctactatcggaccggttcaggccaccacatgcgag +ctatatgagctggttgaggccatggtggagaagggccaggacggctccgccgtgcttgagcttgacctctgc +agccgtgatgtctcgcgtattacatttttccagaaggactgcaataaatttacaacaggtgagaccatcgcc +cacggtaaggttggccagggtatttcggcttggagtaaaaccttttgtgctttattcggcccgtggttccgc +gccattgagaaggagattctggctctgctcccacctaacgtcttctatggcgatgcctatgaagagtcagtg +ttctccgcagycatctctggggctggttccagtatg---gttttcgagaacgatttttcagagtttgatagc +acccaaaataatttttctct------------------tggccttgagtgtgtcatcatggaggagtgtggc +atgccccagtggcttatccgactgtaccatttgattagatcagcctggaccctgcaagccccgaaagagtct +ttgaaaggcttttggaagaagcactctggcgagcctggtaccctcctttggaataccgtctggaacatggcg +atcatagcacactgctatgaattccgtgatctgagagtagcagcctttaagggagatgattcagtggttctt +tgcagtgattaccgccagagccgcaatgcggccactctaatagctggttgtgggttgaaattgaaggttgat +taccggcctataggtttgtatgccggcgttgtggtggctccgggcctcggggcacttcctgatgttgtccga +tttgccggtcgattatctgagaagaactggggcccgggccctgagcgtgccgagcagctacgcctagcagtt +tgtgatttcctccgtgggctgacgaatgttgcgcaggtttgtgttgatgttgtgtctcgtg-------ttta +tggggttagccccgggctggtgcataaccttatcggcatgctacagactatcgctgatggaaaggcccattt +tactgagactgtcaaacctgtgctagatcttacgaattctattatacagaggttggaatgaataacatgtt- +c----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gctgctgttcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggtc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaatccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------gctggggctgcgccgctaac +tgctgtttcaccggcgcctgacacggccccagtccctgatgttgactctcgtggcgctatcttgcgccgtca +gtataatctgtccacctctcctttaacctcatctgttgcctctggaactaatcttgtcttgtatgctgcccc +gcttaaccctcttctgcctctccaagacggtaccaatactcacatcatggcgactgaggcgtccaattacgc +ccagtatcgggtcgtccgggctacaatccgctatcgccctttggtgccgaatgctgtcggtggttatgcgat +ttccatttccttctggcctcagactacaactacacccacttctgttgatatgaattccattacttctactga +tgttaggattctagtccagcctggtattgcctccgagctggtcatcccgagtgagcgcctccactaccgtaa +tcaaggctggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggtctggttatgctttg +tattcatggttcccctgttaattcctacaccaatacgccctacaccggggcattggggctcctcgactttgc +actcgagcttgagtttagaaatttgacccccgggaacactaatacccgtgtgtcccgttatactagtacagc +ccggcaccgtttgcgtcgcggtgccgatgggacagccgagctcacaaccactgcagcaacacggtttatgaa +ggacttgcatttta---ccgggacaaat---ggcgttggcgaggtcggccgtggtattgccctaacgctatt +caatcttgctgatacacttctcggcgggctgccgacagaattgatttcgtcggctggaggtcaactgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaaaggcattgctataccacacgatatagatctaggggactcccgtgtggtcatacaagactatgataa +ccagcatgaacaggaccggcctaccccatcgccggccccgtcccgccctttctcagtccttcgagccaatga +tgttctgtggctctc-----------------------------tttgactgcagctgaatatgac------ +cagactacctatggctcgtcgactaaccctatgtatgtttcagatactgtcacatttgt---taatgtggcg +acaggtgctcaggctgttgcccgatcccttgattggtccaaggttactttggatggccgaccacttactacc +at-----ccagcagtactctaaggcattctatgtgc-tgccgcttcgtggcaagctttctttttgggaggct +ggtacgactaaa--gccggctatccctataattataacactaccgctagtgaccagattctaatcgagaatg +cggccggccac------cgcgttgccat-atctacttatactactagtcttgg--------------tgccg +gccccgtgtctgtttc-tgcggtcggcgttcttgccccacactctgctttagctgtgcttgaagatactatt +gact---------accctgcccgtg----cccatactttcgatgatttttgccccgagtgccgcaatc---t +cggcctgcagggctgtgcttttcagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagttttaattaa-tt----ca-ccc--ttt------gt +gccc-cct--------tc-taaa-ct-tt----gt-tc-tgt----------------tatt-t-------c +tttcttct----gcg---------------tt---------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444048.1/17288/1-7288 |Hepeviridae isolate HEPAC3, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccaccaattcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggttcggccgtttctatcccgtgttcagactgatatcct +tattaacttgatgcaaccccggcagctcgttttccggcctgaagttctttggaatcacccgatccagcgggt +tatccataatgagctggaacaata---ctgccgagccc-gcgctggccgctgtcttgaggtgggcgctcacc +caagatccatcaatgataaccccaatgttctgcaccggtgctttctccgcccggtcggtagagacgtccagc +gctggtattctgcccccactcgcggtccagcggctaactgccgccgctctgcactacgtggtttgccccctg +tcgaccgtacatattgcttcgacgggttttcccgctgcgcctttgccgctgagaccggaattgctttatact +cactgcatgatttgtggccctcggacgttgcggaggctatggctcgccacgggatgacgcgattgtacgctg +ccctccaccta-ccccctgaggttctgttaccacctggcacttaccatacaacttcctatcttttgattcac +gacggcaatcgtgccgtcgtgacttacgagggtgatactagtgcgggctataatcacgatgtgtctatactt +cgtgcatggatccgcaccaccaaaatagttggcgaccacccactggtaatagagagagtccgcgccatcggc +tgccattttgtcctacttcttactgcagcccccgagccatccccaatgccttatgttccgtaccctcgctca +acagaggtgtacgttagatccatatttggtcctggt---------gggtcaccctctctttttccgtcagcc +t----------gctctactaagtcta-cattccatgccgtcccggttcatatttgggaccggctaatgctct +ttggtgccaccttagatgaccaggccttttgctgctcacggcttatgacctatctccgcgggattagctata +aagtgactgttggtgcacttgtcgccaacgagggctggaatgcctcagaggacgcgctcaccgctgtgatta +ctgcagcgtatctgaccatctgccatcagcgctacttacgaacacaggccatttctaaaggcatgcgtcggt +tagaggttgagcatgcccaaaagtttatcacaaggttatatagttggctttttgaaaagtc---------ag +gccgtgactacatccccggtcgccagctccagttttatgcacagtgccgccgttggctctcggccgggtttc +atctggaccctagagttctcgtttttgacgaggcggtcccttgc---cgctgccggagcttcttaaagaa-- +----ggttgccggaaaattttgttgttttatgaaatggttgggccaaga------gtgcacctgttttttgg +----------------agccagcggaaggtctggttggtgattgtggc--------catgataacgaggcct +atgaggggtctgaggtagaccccgccgagcctgctcatcttgatgtttccgggacctatgcggtccacggcc +gtcagcttgaggctctatatagagcgctcaatatcccagatgacatcgcggctcgtgcgtcacgtctgacgg +ccactgtagaacttgccgccagcccaggtcgactcgagtgccgtacggtactcgggaataagacttttcgca +catcaataactgatggcgcccatctcgaggccaacggtcc------------------------cgagcagt +acgtcctgacatttgatgactctcgccaggctatgggggctgggcctcacagccttacgtatgaacttgttc +ctgccggcttgcaagtcaaaatatcttct-------aatggcctggattgtactgccatatttccc---cct +ggtggggcaccaagtgcagcaccaggtgaagtggcggctttctgcagcgccttatacaggtacaacaggttc +acccagcaccattcgttgaccggcgggttgtggctgcaccctgaggggcttcttggcctcttcccccctttc +tccccggggcatctttgggagtctgcaaaccccttttgtggtgagagcacactttacacacggacatggtct +acatctggtttttccagcgacttctccccacccgaggcggcctatgccgccccagcgcccgacat----ggg +gctaccctcgggcgcctcctcatccgctagtggtat-----------------ctgggcgtt---------- +---------cccaccgccc----tctgagaggt--------------cggcgaccgctccaccacccgtgat +cccagttagtaagccagctaa---------------------------------------ttcacc------ +------------------------------------------------------------------------ +-aagtctcgc-------------------------------------------------------------- +-------------cacacct----gggtcccccgtccatgagccgcctacaccaccattggctctcaccccg +g---------------------------------------------tcagtaaaccggctagcccgtctagc +cctactatatacagg-------------------------------------cctcctgcccgtaagccacc +cacaccacc--------------------------------------accggcccgtactcgccggc----- +-------------------tcctttatacataccctgatggggccaaggtgtatgcaggctctttgtttgag +tctgattgtgactggcttgttaatgcatctaatcctggccaccgtcctggcggcggtctctgtcatgcattt +taccaacgcttcccggagtcat------tccatccaactgattttgtcatgcgtgaagg---cctcgccgca +tatactctgagcccgcgcccgatcatccacgcagtggcccccgattatagggttgagcagaaccccaagagg +ctcgaggcggcatatcgtgagacctgctcccgcctcggcacagccgcgtatcccctactggggtcagggatt +taccaggtccctgtgagtttaagtttcgacgcctgggagcgtaaccaccgcccaggtgatgaactgtacctt +actgagcctgctgccgcc-------------------------------------------------tggtt +cgaggctaataagccaactca--------------------------------------------------- +------------------------------------------gccggctctaacaattactgaggacaccgc +cc------------gcacggctaaccttgcgcttgagattg------------actctgccactgaggtggg +ccgtgcttgc---gccggctgtactattaaccctgggattgtccattaccagtttaccgccggggtccctgg +ctctgggaagtctagatcyatacagcagggggatgtygatgtcgtggtcgtaccaactcgtgagctccgtaa +cagttggcgacgccgtggctttgctgcttttacaccccacacagcagctcgtgttaccgccggccggcgtgt +ggtgatagatgaggcaccttcgcttccaccgcacttgttgctgctccacatgcagcgagcctcatcggtcca +tctccttggcgaccccaaccagattcctgccattgactttgagcacgctggtttggtcccggcgatccgtcc +cgagttagctcctactagttggtggcatgttacccaccgctgccccgccgatgtatgtgagcttatacgcgg +ggcctaccccaagatccagacgaccagccgtgtgctgagatccttattttggaatgaa------cctgcggt +gggtcagaggctggttttcacgcaggcagccaaagcggccaaccccggcgcaatcaccgtccatgaggccca +gggtgccacgtttactgagactactatcatagccacggccgatgctagaggtcttattcaatcttcccgcgc +acatgccatcgttgcgcttactcgccatacagaaaagtgcgtcattcttgacgctcctggcctgttgcgtga +ggtcggcatctccgatataattgttaataatttt------------------------------tttttggc +tggtg--gtgaagtaggccaccaccgcccttcaattataccgcgtggtaacccagaccgaaatttagacat- +-----cctacaggcatttcctccgtcttgccaaattagtgcctaccaccaattggctgaggagctgggccac +cggccggcccctgtagccgccgtcctgcccccttgccctgagcttgagcaggggttactctacatgccgcag +gagctcacggtgtccgacagcgtcctaatttttgaactcacggacatagtccactgccgtatggctgctccc +agccagcgtaaggcggtcctttctacgctcgtcggtaggtacggccgccgaacgaagctgtatgaagcggcc +cattctgatgttcgtgagtctttgggaaggttcatccctactatcggtccggtccaggccaccacatgtgag +ttatatgagctggttgaggccatggtggagaagggccaggatggttccgccgtgcttgagctcgacctctgc +aaccgtgatgtttcgcgtattacattcttccagaaggattgtaataaattcacaacaggtgagaccattgcc +catggcaaggtgggccagggcatttcggcttggagtaagactttctgtgctttattcggtccgtggttccgt +gctattgagaaggagatcctggctctgctcccacccaacattttttatggcgatgcctatgaggagtcagtg +ttttctgcagccatttctggggccagctccagtatg---gtttttgagaatgatttttctgagtttgatagc +acccaaaacaatttttctct------------------tggccttgagtgtgtcattatggaggagtgtggc +atgccccagtggcttatccgactgtatcatttagttagatcggcctggattttgcaagcccctaaagagtct +ttgaaaggtttctggaagaagcattccggcgagcctggcaccctcctttggaacaccgtttggaatatggct +atcatagcacactgctatgagttccgtgacctgagggtggcagcgtttaagggggatgattcagtggttctt +tgcagtgattaccgccagagccgcaatgcggccaccctgatagccggttgtgggttgaaattgaaggttgat +taccggcctataggtttgtatgccggcgttgtggtggccccgggcctcggggcacttcccgatgttgtccgg +ttcgccggacgactatctgagaagaactggggcccgggccccgagcgcgccgaacagctgcgcctagcagtt +tgtgatttccttcgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacagactattgctgatgggaaggcccactt +tactgagactatcaaacctgtgctggatcttacaaattctattatacagaggttggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gttgttgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcttatcacaacccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtctctccagcgcctgatacggccccagtccctgatgttgactctcgtggtgctattttgcgccgtca +gtataatttgtccacctctccattgacttcatctgttgcttctggaactaatcttgtcctgtatgccgcccc +acttaatcctcttctgcctctccaagacggtaccaatactcacattatggcgactgaagcgtctaattacgc +ccagtaccgggttgttcgggctacaatccgctatcgccctttggtgccgaatgccgtcggtggttacgcaat +ttcaatttccttctggcctcagactacaaccacacccacctctgttgacatgaattccattacttctactga +tgttaggattttagtccagcctggcatagcctctgagcttgtcatcccgagtgagcgccttcactaccgtaa +tcaaggctggcgttctgttgagacatcgggtgtggctgaggaggaggcgacatcaggcctggttatgctctg +tatccatggctcccctgttaactcctatactaatactccctatactggggcattagggctccttgactttgc +actcgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgatacactagtacagc +ccggcaccgtttgcgccgcggtgctgatgggacggccgagcttacaaccaccgcagccacacgtttcatgaa +ggacttgcatttca---ctgggacaaat---ggagttggtgaggtaggccgtggtatagccctaacgctatt +taatcttgctgatacacttctcggcgggttgccgacagaattgatttcgtcggccggaggtcaactgttcta +ctcccgcccggttgtctcggccaatggcgagccaactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggcattgctataccacatgatatagacttaggggattcccgcgtggttattcaagattatgacaa +ccaacatgagcaggaccggcccaccccgtcgccggccccgtcccgccctttctcggtccttcgagctaatga +tgtcctgtggctctc-----------------------------tctgactgcggctgaatacgac------ +cagaccacctatggctcgtctaccaaccccatgtatgtttcagatacagtcacatttgt---taatgtggcg +acaggtgcccaggccgtcgcccgatcccttgattggtccaaggtcactctggatggccggccacttactacc +at-----acagcagtactccaagacattttatgtac-tgccacttcgtggcaagctttccttttgggaggct +ggcacgactaag--gctggctacccttacaattataacactactgctagtgaccagattttgattgagaatg +cagccggtcac------cgtgttgccat-atctacttataccactagtcttgg--------------tgccg +gccctgtgtctgtttc-tgcggtcggcgttcttgccccgcactctgctttagctgtgctcgaagatactatt +gact---------accctgctcgtg----cccatacttttgatgacttctgccctgagtgccgcaatc---t +tggcttgcagggctgtgctttccagtc--------tactgtcgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattat-tt-----c-cccc-ttt------gt +gccc-cct--------tc-taaa-ct-tc----gc-tc-tgt----------------tatt-t-------c +tttttttc----tg---------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444049.1/17194/1-7194 |Hepeviridae isolate HEPAC24, complete genome +-----------------------tcgctctagagtg-tgaatg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcatcactactgccattgag---caagctgctctggc +ggcggccaattctgccttggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagctggttttccgacctgaagtgctctggaatcatcctatccaacgggt +tatccataatgagttagaacagta---ctgccgggccc-gggccggtcgctgtttagaggttggggcccacc +caagatccatcaatgacaacccgaatgttttgcatcgctgcttcctacgaccagttggtagagatgttcagc +gctggtattctgcccctacccgtggccctgcggccaactgccgccgctccgctttgcgtggcctcccccccg +tcgaccgcacctactgttttgatggattctctcgttgctcgtttgctgcggagactggtgttgccctctact +cattgcatgacctctggccggccgatgttgcagaggccatggcccgacatgggatgacacgcttatatgctg +cactacatctc-ccccctgaagtattactaccacctggtacttatcacacaacttcataccttcttattcac +gacggcgatcgtgccgttgtgacttatgagggtgacactagtgcaggttacaaccatgatgtttccatactc +cgcgcatggatccgcacaactaagatagttggcgaccatccgctggtgatagagcgtgtgcgggctatcggc +tgccattttgtgctgctgctcactgcggcccctgaaccgtcaccaatgccttatgttccttacccccggtcg +acagaggtgtacgtccgttccatattcggccctggc---------gggtccccgtccctgttcccatcagct +t----------gctctacaaaatcca-catttcatgccgtcccagttcatatttgggaccggctcatgctct +ttggtgccaccctggacgatcaggcgttttgctgctcacggcttatgacttaccttcgtgggattagttaca +aggtcactgtaggtgcccttgttgctaatgaaggctggaatgcttcggaggacgctcttaccgctgttatca +ccgcagcgtatttgactatttgtcatcagcgttacctccgcactcaggctatatccaaaggcatgcgccggc +tggaggttgagcatgctcaaaaatttatcacaagactctatagttggctgtttgagaagtc---------tg +gccgtgactacatccccggccgccagctccagttctacgcacagtgccgccgctggttatcggcgggtttcc +accttgacccaagggtgcttgttttcgatgagtctgctccctgc---cgttgtaggacgtttcttaagaa-- +----ggttgcaggtaagttctgctgttttatgaagtggctggggcagga------gtgcacctgcttcctgg +----------------aaccagctgaaggtttggttggtgaccatggc--------cacgataatgaagcct +atgagggttctgaggtcgaccaggccgagcccgcccatcttgatgtttctgggacttatgccgtccatggga +gccaacttgaggccctgtatagggcgctcaacatcccgcacgatattgccgctcgagcctcccgtttaaccg +ccactgttgaacttactgcaggtccagaccgtttggagtgtcgtactgtgctcgggaataagaccttccgga +caacggtggttgatggcgctcatcttgaggcgaatggccc------------------------cgagcagt +atgtcctttcgtttgacgcctcctgccagtctatgggggccgggccgcataacctcacctatgagctcactc +ctgctggtctgcaggttaagatttcatct-------aatggcctggattgcactgcaacattcccc---ccg +ggcggagcccctagtgcagctccgggggaggtagcagctttttgcagtgccctctataggtacaacaggttt +acccagcgccattcgcttacaggcggtttgtggctgcatcctgaggggctattgggtatcttcccccctttc +tctcccgggcatctctgggagtccgctaaccctttttgtggggagggaactttgtacacccggacctggtca +ayatctggtttttctagtgatttttccccccctgaggcggctgctgctgcgccggccgctgccgc----agg +gttactcc---accctacaccccctgttagtgatat-----------------ttgggtgtt---------- +---------gccgccaccc----tctgaggggt--------------ctcaggttgatgcagcgcctgctcc +tcyag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tccctgagcctgttcaactgcccggc +cctgctaggccgaag-------------------------------------gcccccgtgcgtaagccacc +aacatcacc--------------------------------------acctccacgtacccgccgcc----- +-------------------tcctctacacttatccggacggggcaaaggtgtatgcggggtcactgtttgag +tcggactgtgaytggctggtcaatgcgtcgaatcccggccatcgtcccggaggtggcctttgccatgctttt +taccaacgctaccccgaggctt------tccacccaaccgagttcgttatgcgtgatgg---tcttgccgca +tatactttaactcctcggcctatcatccacgcggtggctcccgattatagggctgagcagaacccgaagagg +cttgaggcagcatatcgagagacctgctcccgccgtggcaccgccgcttacccactcctcggctcaggcata +taccgagttcccgttagcctcagctttgacgcttgggagcgtaaccaccgccccggggatgagctttacttg +actgacctcgccgccacc-------------------------------------------------tggtt +cgaggccaacaagccagcgca--------------------------------------------------- +------------------------------------------accggccctcacaataactgaagatacagc +cc------------gcacagccaacctagcactagagatcg------------acgctgccacggaggttgg +ccgggcttgt---gccggttgtacagttagtcctggggttgtgcactatcaatttaccgccggggttccagg +ttcagggaagtcgcggtcyatacagcarggggaygtygatgtggtggttgtccccactcgggagcttcggaa +tagttggcgtcgccggggttttgcagcttttacgcctcacacggcggcccgcgttaccacgggccgtcgtgt +cgtgattgatgaggccccatcccttccaccgcacctgctgcttttacacatgcagcgggcctcgtcggtcca +ccttctcggcgacccaaatcagatccccgctatagactttgagcatgccggtctggtccccgcaatacgccc +cgagcttgcacccaccacctggtggcatgtcactcaccgctgccccgctgatgtgtgcgagcttatacgcgg +ggcctatcccaaaatccagactactagccgcgtgctgcggtctttattctggaatgag------cccgccat +tggccagaagttagttttcacgcaggccgctaaggctgccaaccccggcgcgattacagtccatgaggccca +gggcgccactttcacggagactacaattatagccacggctgatgccagggggctcattcaatcttcccgagc +ccacgctatagtcgcgctcacccgccacacagagaagtgcgttatccttgatgcccctggtttgttacgtga +ggttggtatatctgatataattgtcaacaatttc------------------------------ttcctcgc +cggtg--gggaagtgggycaccaccgcccytctgtgataccccgcggcagtcctgaccacaacctcgcgac- +-----attacaggcttttcccccctcctgtcagatcagtgcttaccatcagttagctgaggagctgggccac +cgcccggcccccgtcgctgccgtcctgcccccctgccccgaacttgagcagggcctgctgtatatgccacaa +gagctcacggtgtctgacagcgtgctggtttttgaactcacggacatagttcattgccgaatggctgcccct +agccagcggaaggccgtcctatcgacgcttgtgggcaggtatggccgccggacgaagctgtatgaggcagct +cactccgatgtccgtgagtccctgacaagattcattcccaccatcgggcccgttcaggcaactacgtgtgag +ctatacgaactggttgaggccatggtgaacaagggccaggacggctcagccgtatttgagcttgatctttgc +aatcgcgatgtatcgcgtattacatttttccagaaagattgcaacaagttcaccacaggggagaccattgcc +cacggtaaggtcggccagggcatctcggcctggagcaagaccttctgtgccctctttggcccgtggtttcgt +gctattgaaaaagaaatactggccctgctcccgcccaatatcttctacggcgatgcatatgaagagtctgtg +tttgctgccgccgtgtccggggcaggttcatgcatg---gtatttgagaatgatttttcagagtttgatagc +actcaaaataatttctccct------------------tggcctcgagtgtgtagtcatggaagaatgcggc +atgccccagtggctaatcaggttgtaccacttggttcggtcagcctggattttacaggcgccgaaggagtct +cttaaagggttttggaagaagcattctggygagcccggcaccctcctttggaacaccgtttggaatatggcg +atcatagcacattgctacgagtttcgtgatcttaaggttgccgccttcaaaggagatgattcggtggtcctc +tgcagtgactaccgtcaaagccgcaacgcagcggccctgattgcaggttgcgggcttaaactaaaggttgat +tatcgccctatcgggctgtatgccggtgtggtggtggcccccggcctggggacgctacctgatgtagtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggccgagcagttgcgccttgctgtt +tgtgattttcttcgagggctgacgaatgttgcgcaggtatgtgttgatgttgtatcccgag-------ttta +cggagttagccctgggctggtacataacctcattggcatgttgcaaaccattgctgatggtaaggcccactt +tacagagactgttaaacctgtgcttgaccttacgaattccattatccagcgggtggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcctcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcatttcgcaacccggggctggagctcgccctc +gacagccatcccg---------------ccccctcggcacctcttggcgtgaccagtccca----------- +------gcgcccccccgctcccccacgtcgtcgacctacccca---------actggggctgcgccgctgac +tgctatatcacctgctcctgatgcggcccccgtgcctgatgttgattctcgcggcgctatattacggcgcca +gtataatttatccacatccccactcacatcatccgttgcctcaggtaccaatctggttctttatgctgcccc +gctaaatcccttgttacctcttcaggatggcaccaacactcacatcatggctactgaggcgtctaactatgc +ccagtaccgggttgtccgagctacgatccgttacaggccgttggtgccgaatgctgtcggcggttatgcaat +ctccatctcattttggcctcagaccactaccacccctacgtctgttgacatgaattctattacctcyactga +tgttaggatcctagttcagcccggtattgcttccgagttagttatccctagtgaacgcctccactaccgtaa +ccaaggttggcgctctgtggagacctcgggtgtggctgaggaggaggccacttctggtttggtgatgctatg +catccatggctcccccgttaattcctacaccaataccccctataccggggcgcttgggctccttgattttgc +cctagagcttgagtttaggaacttgacacccgggaacaccaacacccgtgtttcccggtatacaagcactgc +ccgtcatcggctgcgccgcggcgccgatggcactgctgagcttaccaccacggcggctacacgtttcatgaa +ggacctgcacttca---ccggtacgaat---ggggtcggtgaggtgggccgtggtattgcccttacactctt +taatcttgctgacacgctcctcggcggtctgccgacagaattaatttcgtcggctgggggacagttgttcta +ctcccgccccgtcgtctcagccaatggcgagccggctgttaagttatatacatctgtggagaatgcacagca +ggataaagggattgctattccacatgacatagacttaggtgactctcgtgtggttattcaagattatgataa +ccagcacgagcaggaccggcccaccccttcgcccgccccatctcgccctttttcggtccttcgtgctaatga +tgttttatggctttc-----------------------------tcttactgccgccgagtatgac------ +cagactacatacgggtcgtccaccaacccaatgtatgtctcagatactgttacacttgt---caacgtggct +acaggagcccaggctgttgcccgctctcttgattggtctaaagttactctagatggccgcccccttactacc +at-----tcagcagtactccaaaacattttatgttc-tcccgcttcgcgggaagctatccttttgggaggct +gggacaactaaa--gctggttacccttataattacaatacgactgctagtgaccagattttaattgaaaatg +cagctggtcac------cgtgttgctat-ctctacttatactaccagccttgg--------------cgctg +gccctgtgtcagtttc-tgcagtcggtgtgttagccccacattcggctcttgcagttcttgaggatactact +gact---------accctgctcgcg----cccatacttttgatgatttctgtccggagtgtcgtgccc---t +tggtttgcaggggtgtgccttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattaa-tt----t--cctt---t------gt +gccc-cct--------tc-atag-tttct----gc-c----------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444050.1/17316/1-7316 |Hepeviridae isolate HEPAC94, complete genome +----------------------------------------------------------------tcgatgc- +---catggaggcccaccagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgctttggcgaatgctgtggtggtacggccgtttttatctcgtattcagactgatatcct +tattaacctgatgcaacctcggcagcttgttttccggcctgaagttctctggaatcacccgatccagcgagt +tatacataatgagctggagcaata---ctgccgagccc-gcgctggccgctgccttgaggtgggcgctcacc +caagatccatcaatgataaccccaatgttctgcaccggtgctttctccgcccggttggcagagacgtccagc +gctggtactccgcccccactcgtggtccagcggctaactgccgccgctctgcgctacgtggtttgccccctg +tcgatcgtacatattgctttgacgggttctcccgctgcgcctttgccgctgagaccgggattgctttatact +cactgcacgacctttggccctcggacgttgcggaggccatggcacgccacgggatgacgcgcttgtatgctg +ccctccattta-cctcctgaggttctgttaccacctggcacttatcacacaacttcctatcttttgattcac +gacggcaatcgtgccgtcgtgacttacgagggtgatactagtgcgggctataatcacgatgtgtctatactt +cgtgcatggatccgcaccactaaaatagttggtgatcacccactggtaatagagagagtccgcgctatcggc +tgccattttgttctactccttactgcagcccccgagccatcaccaatgccttatgttccgtaccctcgctca +acagaggtgtatgttagatccatattcggtcccggt---------gggtcgccttctctttttccgtcagcc +t----------gctctactaagtcta-cattccacgccgtcccggtccacatctgggatcggctaatgctct +ttggtgccaccttagatgatcaggccttttgctgctcgcggcttatgacctatctccgcgggattagttata +aagtaactgttggtgcacttgtcgccaacgaaggctggaatgcctcggaggatgcgctcaccgctgtgatta +ctgcagcgtatctgaccatctgtcatcagcgctacctacggacacaggctatttccaaaggcatgcgtcggt +tagaggttgagcatgcccaaaagtttatcacaaggttatacagttggctgtttgaaaagtc---------ag +gccgtgactacatccccggccgccagctccagttctatgcgcagtgccgccgttggctctcggccggctttc +atctggaccctagagtcctcgtctttgacgaggcggtcccttgc---cgttgccggagctttttaaagaa-- +----ggctgccggaaaattttgttgttttatgaaatggttggggcagga------gtgcacctgttttttgg +----------------agccagcggaaggcctggttggtgactgtggc--------catgataacgaggcct +atgaggggtctgaggtggaccccgccgagcctgctcatcttgatgtttccgggacctatgcggtccacggcc +gtcagcttgaggctctatatagagcgcttaatatcccggatgacatcgccgctcgtgcgtcacgtctgacgg +ctactgtagaacttgccgccagcccaggccgactcgagtgccgtacggtgcttgggaataagacttttcgca +catcaataactgatggcgcccatctcgaggtcaacggtcc------------------------cgagcagt +acgttttgacatttgatgactctcgccaggctatgggggctgggccacacagtctcacgtatgaacttgtcc +ctgccggcttgcaagtcaaaatatcttct-------aatggcctagattgtactgccatattcccc---cct +ggtggcgcaccaagcgcagcaccaggtgaggtggcggctttctgtagcgccttatacaggtataataggttc +acccagcgccattcgctaaccggcgggctgtggctgcatcctgaggggcttcttggcctgttcccccctttc +tccccggggcatctctgggagtctgcgaaccccttttgtggtgagagcacactttacacacgaacttggtct +acatctggcttttccagcgatttctccccacccgaggcggcctgtgccgccccagcacccgacat----ggg +gctaccttcgggcgccccctcgtccactagtgatat-----------------ctgggtgtt---------- +---------cccaccgccc----tctgagaggt--------------cggcgatcgctccaccacccgtaac +cccggttagtaagccagctac---------------------------------------cccgcc------ +------------------------------------------------------------------------ +-aagttttgc-------------------------------------------------------------- +-------------tacacct----aggtcccctgtttgtgagccacctacgccaccaccggctctcaccccg +g---------------------------------------------ctagtaaaccagctagcctgtctagc +cctactacatatagg-------------------------------------cctcccgcccgtaagtcacc +cacaccatt--------------------------------------accggctcgcactcgccggc----- +-------------------tcctttatacatacccagatggggccaaggtgtatgcaggctctttgtttgag +tcagattgtgattggctggtcaatgcatctaaccctggccaccgtcccggcggcggtctttgccacgcattt +taccaacgttttccggagtcat------tccatccaactgattttgtcatgcgtgaagg---tctcgccgca +tatactctgagcccgcgtccgatcattcacgcagtggcccccgattacagggttgagcagaaccccaagagg +ttggaggcggcatatcgtgagacctgctcccgcctcgggacagccgcatatcctctattggggtcagggatt +taccaggtccctgtgagtttaagtttcgacgcctgggagcgcaaccaccgcccaggtgatgaactgtacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacacagc +cc------------gcacggctaaccttgcgcttgagattg------------actctgccactgaggtggg +ccgtgcttgc---accggctgtactatcaatcccgggattgttcattatcagttcaccgccggggtccctgg +ctctgggaagtctagatctatacagcagggggatgttgatgtcgtggtcgtgccaactcgtgagcttcgtaa +tagttggcgacgccgtggctttgctgcttttacaccccacacagcagctcgtgttactgccggccggcgtgt +ggtgatagatgaggcaccttcgcttccaccgcatttgttgctgctccatatgcagcgagcctcatcggttca +tctccttggtgaccccaaccagatccctgccattgactttgagcacgccggtctggttccagcgattcgtcc +tgagctagctcctactagttggtggcatgtcacccaccgctgccccgccgatgtatgtgagctcatacgcgg +ggcctaccccaagatccagacgaccagccgtgtgctgagatccttattctggaacgag------cctgcggt +gggtcagaggttggttttcacgcaggcggccaaagcggccaatcccggcgcaatcaccgtccatgaggccca +gggtgccacgtttactgagactactatcatagccacggccgatgctagaggtcttattcaatcttcccgtgc +acatgccattgttgcgcttactcgccatacagaaaagtgcgtcattctcgacgctcctggcctgttgcgcga +ggtcggcatctctgatataattgttaataacttt------------------------------tttytggc +cggtg--gtgaagtgggtcaccatcgcccctctactataccgcgcggcaacccagaccgaaacttagacac- +-----tctacaggcgttccctccgtcctgccaaattagtgcctatcaccaattggctgaagagctgggccac +cggccggcccctgtggccgccgtcctgcccccttgccccgagcttgagcaggggttactctacatgccgcag +gagctcacggtgtccgatagcgtcctaatttttgaactcacggacatagttcactgccgtatggccgccccc +agtcaacgtaaggcggtcctttctacgctcgtcggtaggtacggccgccgaacaaagctgtatgaagcggcc +cattctgatgttcgtgagtccttaggaaggttcatccctactatcggcccggttcaggccaccacatgcgag +ttatatgagctggttgaggccatggtggagaagggccaggatggctccgccgtgcttgagctcgacctctgc +agccgtgatgtctcgcgtattacattcttccagaaggattgtaataaatttacaacaggtgagactattgcc +cacggcaaggtgggccagggcatttcggcttggagtaagactttctgtgctttattcggcccgtggttccgt +gctattgagaaggagatcctggctctgctcccacccaacattttttatggcgatgcctatgaggagtcagtg +ttttctgcagccatttctggggctggctccagtatg---gttttcgagaacgatttttctgagtttgatagc +actcaaaacaatttttccct------------------tggccttgagtgtgtcattatggaggagtgtggc +atgccccagtggcttatccgactgtatcatttagttagatcggcctggactttgcaagcccctaaagagtct +ttgaaaggtttctggaagaagcattctggcgagcccggcaccctcctttggaatactgtttggaatatggcg +atcatagcacattgctatgaatttcgcgacctgagggtggcagcgtttaagggggatgattcagtggttctc +tgtagtgattaccgccagagccgcaatgcagccaccctgatagcaggctgtgggttgaaattgaaggttgat +taccggcctataggtctgtatgccggcgttgtagttgctccgggcctcggggcacttcctgatgttgtccgg +ttcgccggccgattgtctgagaagaactggggcccgggccccgagcgcgccgarcagttgcgcctagcagtt +tgtgatttccttcgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------tcta +tggggttagccccgggttggtgcataaccttattggcatgctacagactatcgctgatgggaaggcccactt +cactgagactatcaaacctgtgctggatcttacaaattctattatacagaggttggaatgaataacatgtt- +c----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gctgttgctcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggagtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcttatcacaatccggggctggagctcgtcctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgccgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtttcaccggcgcctgacacggccccagttcctgatgttgattctcgtggtgctatcttgcgccgtca +gtataatttgtccacctctccactaacttcatctgttgcttctggaactaatcttgtcctgtatgccgcccc +gcttaacccccttttgcctctccaagacggcaccaatactcacatcatggcgactgaggcgtctaattacgc +ccagtatcgggttgttcgggctacaatccgttatcgccctttggtgccgaatgccgtcggtggttatgcaat +ttcaatttccttctggcctcagactacaactacacccacctctgttgatatgaattccattacttctactga +tgttaggatcttagtccagcctggcatagcctctgagcttgtcatcccgagtgagcgccttcactaccgtaa +tcaaggctggcgttctgttgagacatcgggtgtggctgaggaggaggcgacatcaggtctggtcatgctttg +tattcatggctctcctgttaactcctataccaatacaccttatactggggcattagggctccttgactttgc +actcgagcttgaatttagaaatctgactcctgggaacactaacacccgtgtgtcccgatacactagtacagc +ccggcaccgtctgcgccgcggtgccgatgggacagccgagcttacaactaccgcagccacacgttttatgaa +ggacttgcatttta---ctgggacaaat---ggtgttggtgaggtaggccgcggcatagccctaacgctatt +taatcttgctgatacacttctcggtgggctgccgacagaattgatttcgtcggctggaggtcaactgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggcattgctataccacatgacatagacttaggggactcccgcgtggttatacaagattatgataa +ccagcacgagcaggaccggcctaccccgtcgccggccccgtcccgccccttctcggtccttcgggccaatga +tgtcctgtggctctc-----------------------------tttgactgcggctgaatacgac------ +cagaccacctatggctcgtctaccaaccccatgtatgtttcagatacagttacatttgt---taatgtggcg +acaggtgcccaggccgtcgcccggtcccttgactggtccaaggtcactttggatggtcggccacttaccacc +at-----acagcagtactccaagacattttacgtat-tgccacttcgtggcaagctttccttttgggaagct +ggcacgactaag--gctggctacccttacaattataacactactgctagtgaccagattctgatcgagaatg +cagccggccac------cgtgttgccat-atccacttacactactagtctcgg--------------tgccg +gccctgtgtctgtttc-tgcggtcggcgttcttgccccgcattctgctttagctgtgcttgaagatactatt +gact---------atcccgcccgtg----cccatactttcgatgatttctgccctgaatgtcgcaatc---t +tggcttgcagggctgtgcttttcagtc--------tactgttgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt-----c-ctct-ttt------gt +gccc-cct--------tc-taaa-ct-tt----gc-tc-tgt----------------tatt-t-------c +ttttttct----gcg---------------ttccc-cgcccccgg---------------------aaaaaa +aaaaaa----------------aaaaaa-------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444051.1/17258/1-7258 |Hepeviridae isolate HEPAC34, complete genome +----------------------------------------------------------------tcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +cgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatcccgtgttcagaccgatattct +tattaatctgatgcaaccccggcagctcgttttccggcctgaagtcctctggaaccatccgatccagcgagt +catacataatgagctggagcaata---ttgccgggccc-gcgctggccgttgtcttgaggtgggcgcccacc +caagatctattaatgataaccccaatgttctgcaccggtgctttctccgcccggttggaagagacgtccagc +gctggtattccgcccccactcgtggtccagcggctaactgccgccgctctgcgctacgcggtctgccccctg +tcgatcgcacgtactgcttcgatgggttctctcgctgtgcctttgccgctgagaccgggattgccttatact +cactgcatgacctctggccttcggatgttgcggaggctatggctcgccatgggatgacgcgcttgtatgccg +ccctccactta-ccccctgaggttctgttaccacctggtacttaccacacaacctcctaccttctgattcac +gacggcaatcgtgccgtcgtgacctatgagggggatactagtgcgggttataatcacgatgtgtctatactt +cgtgcatggattcgcaccactaaaatagttggcgaccacccgttggtaatagagagggtccgcgccatcggc +tgccattttgttctactcctcactgcagcccccgagccatccccaatgccttatgtcccgtaccctcgttca +acagaggtgtatgtcaggtctatatttggccctggt---------gggtcgccttctcttttcccatcagcc +t----------gctctactaaatcca-ctttccatgctgtcccggtccacatctgggaccggcttatgcttt +ttggtgccaccttagatgatcaggccttttgctgctcgcggcttatgacctatctccgcgggattagctata +aagtgactgtcggcgcacttgtcgccaacgagggctggaacgcctcggaggatgctctaactgctgtgatta +ctgcagcgtacctgactatctgccatcagcgctacttacgaacccaggccatttctaagggcatgcgtcggt +tagaggtcgagcatgcccaaaagtttatcacaaggctatacagctggctgtttgaaaagtc---------ag +gccgtgactatatccccggtcgccagctccagttttatgcgcagtgccgccgctggctctcggctggcttcc +atctggaccctagagttcttgtctttgacgaggcgatcccttgc---cgttgccggagcttcctgaagaa-- +----ggccgccgggaaattttgttgctttatgaaatggttggggcagga------gtgcacctgttttctgg +----------------agccagcggaaggcctggtcggtgactgtggc--------catgataacgaggcct +acgaagggtctgaggtggatcccgctgagcctgttcaccttgatgtttctgggacttatgcggtccacggcc +gtcagcttgaggccctatatagagcgctcaatatcccagatgacattgcggcccgtgcatcacgtctgacgg +ctactgtagagcttgccgccagcccaggtaaactcgagtgccgcacggtgcttgggaacaaggttttccgca +catcgataactgatggtgcccatctcgaggccaacggtcc------------------------cgagcaat +atgtcttgacatttgatgattctcgccaggcgatgggggctgggccttacagcctcacgtatgagcttgtcc +ctgccggtctgcaggttaaaatgtcttct-------aatggtttggattgtaccgctatattcccc---ttt +ggcggggcgccaagcgctgcaccgggtgaagtggcagctttctgtagcgccctatacaggtacaataggttc +acccagcgccattcgctgaccggtgggttgtggttgcaccctgaggggctccttggcctgttcccccccttt +tccccggggcatctctgggagtctgcaaaccccttttgcggtgagagcacactttatacacgaacttggtct +acatctggtttctctagcgacttctccccacctgaggcggcctatgccgccccagtccctaatac----cgg +gtcaccctcgggtgccccctcttctgctagtgatgt-----------------ctgggtgtt---------- +---------tccaccgccc----tctgaggggt--------------cggcgatcgttccaccatccgtaac +cccggtcagtaagccaactaa---------------------------------------cccgtc------ +------------------------------------------------------------------------ +-tagttttac-------------------------------------------------------------- +-------------tatatct----aagccccccgtctgtgagccacccacactatcatcggccctaatcttg +g---------------------------------------------ctagtaatccagctaacccgtctagc +cttattacatctagg-------------------------------------ccacccgcccgcgagctgcc +tacacagct--------------------------------------gccggctcgcactcgccggc----- +-------------------tcctttatacatatcctgatggggccaaagtgtatgcaggctccttgtttgag +tcagattgtgcttggctggtcaatgcatccaaccctggccaccgccctggtggtggcctctgccatgcattt +taccagcgcttcccggagtcgt------tccacccgactgattttgtcatgcgtgaagg---ccttgctgca +tacaccttgagcccacgtccgatcattcatgcagtggcccccgattacagggttgagcagaaccccaagagg +ctagaggcagcatatcgtgagacctgctcccgcctcggtacagctgcctacccgttactggggtcagggatt +taccaggtccctgtaggcttaagctttgacgcctgggagcgtaatcaccgcccaggcgatgaactctacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagccgaccca--------------------------------------------------- +------------------------------------------gccggccctgacaattactgaggacactgc +cc------------gcacagctaaccttgcgcttgaaattg------------actctgctactgaggtggg +tcgtgcttgc---gccggctgtactattaaccccgggattgtccattaccagtttactgccggagtccccgg +ctccgggaagtctaggtccatacagcaaggggatgttgatgtcgtggttgtgccaacccgtgagctccgtaa +tagttggcgacgccgcggctttgctgcttttacaccccacacagcagctcgtgtcactgccggccggcgtgt +agtaatagacgaggctccctcgctcccaccgcacttgctgttgctccatatgcagcgagcctcttcggtcca +ccttcttggtgaccccaatcagattcctgccattgactttgagcacgccggcttggtcccagcgattcgccc +cgagctagcccctactagctggtggcatgtcacccaccgctgccccgccgatgtgtgtgagctcatacgtgg +ggcctacccaaagattcagacgaccagccgtgtgttgagatctttattttggaatgag------cctgcagt +aggtcagaggctggtcttcacgcaggcagccaaggcggccaaccccggtgcaatcaccgttcatgaggccca +gggcgccacgtttactgagaccaccatcatagccacggccgatgctagaggcctcatccagtcttcccgtgc +acatgccatcgttgcacttactcgccatacagaaaagtgcgtcatcctcgacgcccccggcctactgcgtga +ggtcggcatttctgatgtaattgtcaacaacttt------------------------------ttcttggc +tggtg--gtgaagtgggccatcaccgtccttctatcataccccgtggtaacccagaccagaacttagacat- +-----cctccgagcgttccctccgtcctgccaaatcagtgcttaccaccagctggctgaggagctgggccat +cggccggccccagtggccgccgtcctgcccccctgccctgagcttgagcaggggttactttacatgccgcag +gagcttacggtgtccgatagcgtcttaatctttgaacttacggacatagttcactgtcgtatggctgccccc +agccaacgtaaggcggttctttctacgctcgtcggtaggtatggtcgccgaacgaagctgtacgaagcggcc +cattctgatgttcgcgagtctctagggaggttcattcctactatcggaccggtccaggctacaacatgtgag +ttatatgagctggttgaggccatggtggagaagggccaggacggctccgccgtgcttgagcttgacctctgc +aaccgtgatgtctcgcgtataacatttttccagaaagattgtaacaaatttactacaggtgagaccattgcc +catggtaaggtgggccagggcatttcggcctggagtaaaaccttttgtgctttattcggcccgtggttccgc +gccattgagaaggagattctggctctgctcccacctaatattttctatggcgatgcctatgaggagtcagtg +ttttctgcagccatttctggggccggctccagtatg---gtgtttgagaatgatttttctgagtttgatagc +acccaaaacaatttttctct------------------tggccttgagtgcgttattatggaggagtgtggc +atgccccagtggcttgtccgactgtaccatttaattagatcagcctggatcctgcaagccccgaaagagtct +ttgaaaggtttctggaagaagcattcyggcgagcctggcactctcctttggaacaccgtctggaacatggcg +atcatagcacactgctatgaattccgtgacttgagagtggcagcgtttaaaggggacgattcagtggttctc +tgcagcgattaccgtcagagccgcaatgcggccaccctgatagccggttgtgggttgaaattgaaggttgat +taccggcctataggtttgtatgccggcgttgtggtggccccgggcctcggggcacttcctgatatcgtccgg +tttgcaggtcgattatctgagaagaactggggcccgagttccgagcgcgccgaacagttgcgcctggcagtc +tgtgatttcctccgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataacctcattggcatgttacagactattgctgatgggaaggcccactt +tactgagactatcaagcctgtgctggatcttacaaactctatcatacagaggttagaatgaataacatgtt- +c----------------tctgcattgcccatggg------------ttcgccatgtgccctagggctgttct +gctgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaacccggggctggagctcgcactc +gacagccgacccg---------------ccccctcggctcctcttggcgtgatcagtccca----------- +------gcgcccctccgctgtcccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtatcaccagcgcccgatacagctccagtccctgatgttgattctcgcggcgctattttgcgccgtca +gtacaatttgtccacttctcctttaacctcttctgttgcctccggtactaatcttgttttgtatgccgcccc +ccttaatcctcttttgcccctccaagacggcaccaatactcatatcatggcgactgaggcgtctaattacgc +tcagtaccgggttgtccgggctacaatccgctatcgccctttggtgccgaatgccgtcggtggttatgcaat +ttctatctctttctggcctcagaccacaactacacccacctctgttgatatgaattccatcacctccaccga +cgttaggattttagtccagcctggcatagcctctgagctggtcatcccgagtgagcgccttcactatcgtaa +tcaaggctggcgctctgttgagacatcgggtgtggctgaggaggaggcgacatcaggcctggtcatgctttg +cattcatggttctcctgttaattcttatactaacacgccctataccggggcgttggggctccttgactttgc +actcgagcttgagtttagaaatttgacccctgggaacactaacactcgtgtgtcccgttacaccagtacagc +ccgccaccgtttgcgtcgtggcgccgatgggacagctgagcttacaactactgcagccacacgttttatgaa +ggacctgcacttta---ccgggacaaay---ggtgttggcgaggtgggccgtggtatagccttaacgctatt +taatcttgctgatacgcttctcggtgggttgccgacagaattgatttcgtcggctggaggtcaactgttcta +ctcccgcccggttgtctcagccaatggcgagccgactattaaactatacacctcggtcgagaatgcacagca +ggacaagggtattgctataccacacgatatagatttaggggattcccgtgtgattatacaagactatgacaa +ccaacatgaacaggatcggcctaccccgtcaccggccccgtcccgccccttttcagtccttcgagccaatga +tgtcctgtggctctc-----------------------------tttgactgctgctgaatatgac------ +cagactacctatggctcgtcgaccaatcccatgtatgtttcagatactgtcacatttgt---taatgtggcg +acaggcgcccaggctgttgcccgatcccttgattggtccaaggtcactttggatggccggccactcactacc +at-----ccagcagtactccaagacattttatgtgc-tgccgcttcgtggcaagctttccttttgggaagct +ggtacgactaag--gctggctacccctacaattataatactactgctagtgaccagattctggtcgagaatg +cagccggtcac------cgtgttgccat-atctacttatactactagtcttgg--------------tgctg +gccctgtgtctgtttc-tgcggtcggcgttcttgctccacactctgctttagctgtgcttgaagatactatt +gact---------accccgctcgcg----ctcatacttttgatgatttctgccctgagtgccgcaatc---t +cggcctgcagggctgcgccttccaatc--------cactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaatt-a-tt----cc-ccc--ttt------gt +g-cc-cct--------tc-aaaa-tt-tt------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444052.1/17189/1-7189 |Hepeviridae isolate HEPAC5, complete genome +--------------------------------------------------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggctaattccgccttggcgaatgctgtggtggttcggccgtttttgtcccgtgttcaaactgagattct +tattaacctgatgcaaccccggcagcttgttttccgacctgaagtcttctggaaccacccgattcagcgagt +catacataatgagctggaacaata---ctgccgagccc-gcgccggtcgttgtcttgaggtgggtgctcacc +caagrtccattaatgataaccctaatgttctgcaccggtgctttcttcgcccggttggaagagatgtccagc +gctggtactctgctcccactcgtggtccagcggccaaytgtcgccgttctgcgttgcgcggtctgccccctg +ccgatcgcacgtactgcttcgacgggttctcccgctgcgcctttgccgctgagaccgggatcgctttatact +cactgcatgacctttggccctcggacgttgcggaggctatggcccgccacgggatgacgcgcttgtacgctg +ccctccactta-ccccctgaggttctgctaccacctggcacttaccatacaacctcttatcttctgatccac +gayggtaatcgcgcagtcgtgacttatgagggggatactagtgcaggctataatcacgatgtgtctatactt +cgtgcatggatccgcactactaaaatagtcggtgaccacccactggtaatagagagggttcgcgccattggc +tgccattttgttctactccttactgcagcccctgagccatccccaatgccctatgtcccgtaccctcgttcg +acggaggtgtttgtcagatccatatttggccctggt---------gggtcgccttccctttttccatcagcc +t----------gttctaccaaatcca-cattccatgctgttccggttcacatctgggaccggcttatgcttt +ttggtgccaccttagatgatcaggctttttgctgttcgcgacttatgacttatctccgcgggattagctata +aagtgactgttggcgcactcgtcgccaacgagggttggaacgcctcggaggatgcgctcaccgctgtgatca +ctgcggcgtacctgactatttgtcaccaacgctacctacgaacacaggctatttctaaaggcatgcgtcggc +tagaggttgagcatgcccagaaatttatcacaaggttatacagctggctgtttgaaaagtc---------ag +gccgtgactacatccccggccgccagcttcagttttatgcacagtgccgccgttggctctcggccggttttc +atttggaccctagagtcctcgtctttgacgaggcggtcccctgc---cgctgccggagcttcttaaagaa-- +----agttgccggaaaattctgctgttttatgaaatggttggggcagga------gtgtacctgttttttgg +----------------agccagcggaaggcttggttggtgaytgcggc--------catgacaacgaggcct +atgaagggtctgaggtggatcccgccgagcctgcccaccttgatgtttccgggacctatgcggtccacggcc +gtcagctcgaggctctatatagagctcttaatatcccagatgacattgcagctcgtgcgtcacgtctgacgg +ctactgtggaacttgctgctagccctggccggctcgaatgtcgtacggtgcttgggaacaagacctttcgca +catcaattactgatggtgcccacctagaagccaacggtcc------------------------cgagcagt +acgtcttgacttttgatgatgctcgtcaggcgatgggggctggtccccacagcctcacgtatgaacttgtcc +ccgctggtctgcaggttaaaatatcctct-------aatggcctggattgcaccgctatattccct---cct +ggtggggcgccaagcgctgcaccaggtgaagtggcggctttttgcagcgccctttacaggtacaataggttt +tcccagcgccactcgctgaccggtgggttgtggctgcaccccgaggggctcctcggcctgttcccccctttc +tccccggggcacctttgggagtctgcaaaccccttctgtggcgagagcacactttatacgcgaacttggtct +acatctggtttctctagtgacttctccccacccgaggcagctcatgctattccagcccctgatay----tgg +gttgccttcgggtgctccctcttctgccagtgatgt-----------------ctgggtgtt---------- +---------cccaccgccc----tctgagggat--------------cggcgattattccgccacctgagac +cccag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ccagtaagccagctaacccgcctagt +attactacacccatg-------------------------------------ccccccgtccgtaagccayc +tacaccacc--------------------------------------accggctcgcactcgccggc----- +-------------------tcctctatacatatcctgatggggccaaggtgtatgcaggctctctgttcgag +tcraactgcgattggctggttaatgcgtccaaycctggccaccgccccggtggtggtctttgtcatgcgttt +taccagcgtttcccggagtcgt------tccatccagctgattttattatgcrtgaagg---cctcgccgca +tacactttgagccctcgtccaattattcatgctgtggcccccgattacagggttgagcagaaccccaagagg +ctagaggcagcatatcgtgagacctgctcccgcctcggcacagccgcctacccactactggggtcggggatc +taccaggtccctgtgggcttaagctttgacgcctgggagcgtaaccaccgcccaggtgatgaactttacctt +actgagccggctgccgcc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaagacaccgc +cc------------gcacagctaaccttgcgctcgagrttg------------actccgctactgaggtggg +tcgcgcttgt---gccggctgcactattcatcccgggattgtccattaccagtttaccgctggggtccctgg +ctccgrgaagtctaggtctattcagcagggggatgttgatgttgtagtcgtgccaactcgtgagcttcgcaa +tagttggcgacgccgtggctttgctgcttttacaccccacacagcagctcgtgttactgccggccggcgtgt +ggtgatagacraggcaccttcgcttccaccacacttgctgttgctccatatgcagygggcctcmwcggttca +ccttcttggtgaccccaaccagatccctgccattgactttgagcacgccggtttggtcccagcgattcgccc +cgagctcgcccccactagctggtggcacgtcacccatcgctgccccgccgacgtgtgtgagctcatacgcgg +ggcttacccaaagattcagacgaccagccgtgtgctgcgttctttattctggaatgag------cctgcagt +gggtcagaggctggtcttcacgcaggcagccaaagcggccaatcccggtgcaattaccgttcatgaggcaca +aggcgccacgtttacggagacaaccatcatagccacggccgatgctagaggtcttattcagtcttcccgtgc +acatgccatcgtcgcacttactcgccatactgagaagtgcgtcattcttgacgctcctggcctgctgcgtga +ggttggtatttctgatataattgttaataacttc------------------------------ttcctggc +tggcg--gtgaagtgggccaccatcgcccttctaccataccccgcggtaacccagaccagaacctggacac- +-----cctacgagcgttctctccgtcctgtcaaattagcgcctatcatcagctggctgaggagctgggccac +cggccggccccggtggccgctgtcctgcccccttgccctgagcttgagcaggggctactttacatgccgcag +gagcttacggtgtctgatagcgttctaactttcgaactcacggacattgttcattgccgtatggccgccccc +agtcaacgtaaggctgtcctttcgacactcgtcggtaggtacggccgccgaacgaagctgtatgaagcggcc +cactctgacgytcgcgagtctttagggcggttcatccctaccatcggaccggtccaggccaccacgtgcgag +ctgtacgagctggttgaggccatggtggagaaaggccaggacggctccgccgtgctcgagattgacctctgy +agccgcgatgtctcgcgtatcacattctttcagaaggattgtaataaattcacaacaggtgagaccatcgcc +cacggcaaggtgggccagggtatttcggcttggagtaaaaccttttgcgctttattcggcccttggttccgt +gccattgagaaggagattctggctctgctcccacccaacattttctatggtgatgcctatgaggagtcagtg +ttttctgcagccatttctggggctggctccagcatg---gtttttgagaatgatttttctgagtttgatagc +acccaaaacaacttttctct------------------tggcctcgagtgtgycattatggaggagtgtggy +atgccccagtggcttattcgactgtaccatttggttagatcagcctggaccctgcaagccccgaaagagtct +ttgaaaggcttctggaaaaagcattccggcgagcctggcaccctcctttggaacactatctggaacatggcg +atcatagcacactgctatgaattccgtgacttgagagtggcagcatttaagggggatgattcagtggttctc +tgcagtgattaccgccagagccgcaatgcagccaccctaatagccggctgtgggttgaaattgaaggttgat +taccggcctataggtttgtatgccggcgttgtggtggccccgggcctcggggcactccctgatgttgtccgg +tttgccggtcgattatctgagaagaactggggcccgggccccgaccgcgccgaacagttgcgtttggcagtc +tgtgattttcttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacagactatcgcagatggaaaggcccattt +cactgaaactgtcaagcctgtgctggatcttacaaattctattatacagaggttggaatgaataacatgtt- +c----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgccgacgttgtaccgcaatccggggctggagctcgccctc +gacagccggctcg---------------tcccctcggttcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgccgtcgatctacccca---------actggggctgcgccgctaac +tgccatttcaccagcgcctgatacgtccccagtccccgatgttgaytctcgtggcgctatcctgcgccgcca +gtataatttgtctacctctcctctaacttcatctgttgcttctggaactaatcttgttttgtatgccgcccc +gctcaatcctctcctgcctctacaagacggcaccaatactcatatcatggcgactgaggcgtctaattatgc +tcagtaccgggttgttcgggccacaatccgttatcgccctttggtgccgaatgctgttggtggttacgctat +ttctatttccttctggcctcagactacaactacacctacctctgttgatatgaattctattacttctactga +tgttaggattttagtccagcctggtgtggcctctgagctggtcatcccaagtgagcgccttcactatcgtaa +tcaaggttggcgctctgttgagacatcgggtgtggccgaggaagaggcaacatcaggcttggtcatgctttg +cattcatggctcccctgttaattcttataccaacacgccctataccggggcattagggctcctcgactttgc +actcgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgctacactagtacagc +ccggcaccgtctgcgtcgtggtgctgatgggacagccgagctaacaaccaccgcggccacacgattcatgaa +ggacttgtacttca---cagggacaaac---ggtgttggcgaggtaggccgtggtatagctctaacgctatt +taatcttgctgatacacttctcggtgggttgccgacagaattgatttcgtcggccggaggtcaactgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgttgagaatgcacagca +agacaagggcattgccataccacacgatatagatttaggggattcccgcgtggttatacaagactatgacaa +tcaacatgaacaggaccggcctactccctcgccggccccgtcccgccccttttcagtccttcgagctaatga +tgttctgtggctctc-----------------------------tctgactgcggctgaatatgat------ +cagacaacctatggttcgtcgaccaaccctatgtatgtttcagatactgtcacacttgt---taatgttgcg +acaggtgcccaggctgttgcccgttctcttgattggtccaaggtcaccttggatggccggccgcttactacc +at-----ccagcagtactctaagacattttatgtgc-tgcctcttcgtggcaagctttctttttgggaagct +ggtacgactaag--gctggctacccttataactataacactactgctagtgaccagattttaatcgaaaatg +cggccggtcac------cgtgttgccat-atctacttacaccactagcctcgg--------------tgctg +gtcctgtgtctgtttc-tgcggtcggcgttcttgccccccactctgctttagctgtgcttgaagatactatt +gact---------accccgcccgtg----ctcacactttcgatgatttctgtcctgagtgccgtaatc---t +cggcctgcagggctgtgcttttcagtc--------tactattgctgaacttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-ccc--ttt------gt +accc-ccct-------tc-taaa-ct-tt----gc-tc-tgt----------------tatt-t-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444054.1/17346/1-7346 |Hepeviridae isolate HEPAC2, complete genome +-----------------------gcagagtcatgta-tagatg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattctgccttggcgaatgctgtggtggttcggccgttcttatcccgtatccagactgatatcct +cattaacctgatgcaaccccggcagcttgttttccggcctgaagttctctggaatcacccgatccagcgggt +tatacataatgagttggagcaata---ctgccgagccc-gcgctggccgctgtcttgaggtgggcgctcacc +caagatccatcaatgataaccccaatgttctgcaccggtgctttctccgcccggtcggtagagacgtccagc +gctggtattctgcccccactcgtggcccggcggctaactgccgtcgctctgcgctacgtggtttgccccctg +tcgatcgtacatactgcttcgacgggttttcccgctgtgcttttgctgctgagaccgggattgctttatact +cactgcatgacctttggccctcggacgttgcggaggccatggctcgccacgggatgacgcggttgtatgctg +ccctccaccta-ccccctgaggtcctgttaccacctggcacttaccacacaacctcctatcttttgattcac +gacggcaatcgcgccgtcgtgacttacgagggtgatactagtgcgggctataatcacgatgtgtctatactt +cgtgcatggatccgcaccactaaaatagttggtgatcacccactggtaatagagagagtccgcgccatcggc +tgccattttgttctactccttactgcagcccccgagccatctccaatgccttatgttccgtaccctcgttca +acagaggtgtatgttagatccatatttggtcctggt---------gggtcaccttctcttttcccgtcagcc +t----------gctccactaagtcta-cattccatgccgtcccggtccatatctgggaccggctaatgctct +ttggtgccaccttagatgaccaggccttctgctgctcacggcttatgacctatctccgtgggattagctata +aagtgactgttggcgcacttgtcgccaacgaaggctggaatgcctccgaggatgcgctcaccgctgtgatca +ctgcagcgtatctgaccatctgccatcagcgttacttacggacacaggccatttccaaaggtatgcgtcggt +tagaggttgagcatgcccaaaagtttatcacaaggttatatagttggctgtttgaaaagtc---------ag +gccgtgactwcatccccggtcgccagctccagttttatgcgcagtgccgccgttggctctcggccggattcc +acctggaccctagggttctcgttttcgacgaggcggttccttgc---cgctgccggagctttttaaagaa-- +----ggttgccggaaaattctgttgttttatgaaatggttgggccagga------gtgcacctgctttttgg +----------------agccagcggaaggcctggttggtgattgtggc--------catgataacgaggcct +atgaggggtctgaggtggaccccgccgagcccgctcaccttgatgtttccgggacatatgcggtccacggcc +gtcagcttgaggctctatatagagcgcttaatatcccggatgacatcgtggctcgtgcgtcacgtctgacgg +ctactgtagaacttgccgccagcccaggccgactcgagtgccgtacggtgcttgggaataagacttttcgca +catcaataactgatggcgcccacctcgaggccaatggccc------------------------cgagcagt +acgtcttgacatttgatgactcccgccaggctatgggggctgggccatacagccttacgtatgaacttgtcc +ccgccggcttgcaagttaaaatgtcttct-------aatggcttggattgcactgccatattcccc---cct +ggtggggcaccaagtgcagcaccaggcgaagtggcggctttctgtagtgccttatacaggtacaataggttc +acccagcgtcattcgctgaccggtgggctatggttgcaccccgaggggcttattggcctgtttccccctttc +tccccggggcatatttgggagtctgcaaaccccttttgtggtgagagcacactttatacacggacatggtct +acatctggtttctccagcgacttctccccacccgaggcggcctatgccgccccagcacccgacat----ggg +tctcccctcgggcgccccctcgtccgttagtgatat-----------------ctgggcgtt---------- +---------cccaccgccc----tctgagaggt--------------cggcgatcgctccaccacccgtgat +cccagttagtaagccagctaa---------------------------------------tcctcc------ +------------------------------------------------------------------------ +-aagtcctgc-------------------------------------------------------------- +-------------cacaccy----aggccccccgttcgtgagtcacctacaccaccaccggctctcaccccg +g---------------------------------------------tcagtgaatcagctagcccgtctagc +cctactacatacagg-------------------------------------ccctctgcccgtaagccacc +cacaccacc--------------------------------------accggctcgcactcgccggc----- +-------------------tcctttacacataccctgatggggccaaggtgtatgcaggctctttgtttgag +tcagattgtgactggcttgttaatgcatctaaccctggccaccgtcctggcggcggtctttgccatgcattt +taccaacgcttcccggagtcat------tccatccaaccgactttgtcatgcgtgaagg---tctcgccgca +tatactttgagcccgcgtccgatcattcacgcagtggctcccgactatagggttgagcagaaccccaagagg +ctggaggcggcatatcgtgagacctgctcccgcctcggtacagccgcgtatcctctactggggtcagggatt +taccaagtccctgtgagcttaagtttcgacgcctgggagcgtaaccaccgcccaggtgatgaactgtacctt +actgagccagccgccgcc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacaccgc +cc------------gcacggctaaccttgcgcttgagatcg------------actctgccaccgaggtagg +ccgtgcctgc---gccggctgtactattaaccccgggattgtccattaccagttcaccgccggggtccctgg +ctctgggaagtctagatctgtacagcaaggagatgttgatgtcgtggtcgtaccgactcgtgaacttcgtaa +cagctggcgacgccgtggcttcgctgcttttacaccccacactgcagcccgtgttactgccggccggcgtgt +ggtgatagacgaggcgccttcgcttccaccgcacttgctgctgctccatatgcagcgagcctcatcggtcca +tctccttggtgaccccaaccagatccctgctattgattttgagcacgctggtttggtcccagcgattcgccc +tgagctagctcccactagttggtggcatgtcacccaccgctgccccgccgatgtgtgtgagctcatacgcgg +ggcctaccccaagatccagacgaccagccgtgtgctgagatctttattttggaacgag------cctgcggt +gggtcagaggctggttttcacgcaggcagccaaagcggccaaccccggcgcaatcaccgtycatgaggccca +gggtgccacgtttactgagactactatcatagccacggccgatgctagaggtcttattcaatcttcccgcgc +acatgccatcgttgcgcttactcgccacacagaaaagtgcgtcatcctcgacgctcctggcctgttgcgcga +ggtcggcatctctgatataattgttaataacttt------------------------------ttcctggc +cggcg--gcgaagtgggccaccatcgcccttcaatcataccgcgcggtaacccagaccgaaacttagacac- +-----cctacaggcgttcccaccgtcctgccaaattagtgcctaccatcaattggctgaagagttgggccac +cggccggcccctgtggccgccgtcctgcccccttgccctgagcttgagcaggggttactctacatgccgcag +gagcttacggtgtccgacagcgtcctaattttcgaactcacggatatagttcactgccgtatggccgccccc +agtcagcgtaaggcggtcctttctacgctcgtcggtaggtacggccgccgaacgaagctgtatgaagctgcc +cattctgatgttcgtgagtctttaggaaggtttatccctactatcggcccggtccaggccaccacatgtgag +ttatatgagctggttgaggccatggtggagaagggtcaggacggctccgccgtgcttgagcttgacctctgc +agccgtgatgtctcgcgtattacattcttccagaaggactgtaataagtttacaacaggtgagaccattgcc +cacggcaaggtgggccagggtatctcggcttggagtaagactttctgtgctttattcggtccatggttccgt +gctattgagaaggagatcctggctctgctcccacctaacattttctatggcgatgcctatgaggagtcagtg +ttctctgcagccatttctggggctggctccagtatg---gtttttgagaacgatttctccgagtttgatagc +acccaaaacaatttttctct------------------tggccttgagtgcgttattatggaggagtgtggc +atgccccagtggcttatccgactgtaccatttagttagatcggcctggactttgcaagcccccaaagagtct +ttgaaaggtttttggaagaagcattctggcgagccyggcaccctcctttggaacactgtttggaatatggct +atcatagcacactgctatgagttccgtgacctgagggtggcagcgtttaaaggggatgattcagtggttctt +tgcagtgattaccgccagagccgcaatgcggctgccctgatagccggctgtgggttgaaactgaaggttgat +taccggcctataggtctgtatgccggcgttgtagtggccccgggcctcggggcacttcctgatgttgtccgg +ttcgccggacgactatctgagaagaattggggcccgggccctgagcgcgccgaacagttgcgcctggcagtc +tgtgatttccttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacagactattgctgatgggaaggcccactt +tactgagactattaaacctgtgctggatcttacgaattctattatacagaggttggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gctgttgctcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcttaccacaatccggggctggagctcgccctc +gacagccggcccg---------------cccccttggctcatcttggcgcgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtttcaccagcgcctgacacggccccagttcctgatgttgattctcgtggtgctatcttgcgccgtca +gtataacttgtccacctctccattaacttcatctgttgcttctgggactaatcttgtcctgtatgccgcccc +gcttaaccctcttctgcctctccaagacggcaccaatactcacattatggcgactgaggcgtctaattacgc +ccagtatcgggttgtccgggctacaatccgttatcgccctttggtgccaaatgccgtcggtggttatgcaat +ttcaatctctttctggcctcagactacaactacacccacctctgttgatatgaactccatcacttctactga +tgttaggattttagtccagcctggcatagcctctgagcttgtcatcccgagtgagcgccttcactaccgtaa +tcaaggctggcgttctgttgagacatcgggtgtggctgaggaggaggcgacatcaggtctggtcatgctttg +tattcatggctcccctgttaattcctataccaatacaccctatactggggcattagggctccttgactttgc +actcgagcttgaatttagaaacttgacccctgggaacaccaacacccgtgtgtcccgatacactagtacagc +ccggcaccgcttgcgccgcggtgccgacgggacagccgagcttacaaccaccgcagccacacgcttcatgaa +ggacttgcatttca---ctgggacaaat---ggagttggcgaggtaggccgcggtatagccctaacgttatt +taatcttgctgatacacttctcggcgggttgccgacagaattgatttcgtcggctggaggtcaactgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggcattgctataccacatgatatagatttaggggattcccgtgtggttatacaagactatgacaa +ccaacatgagcaggaccggcctaccccgtcgccggccccgtcccgccccttctcggtccttcgagccaatga +tgttctgtggctctc-----------------------------tctgactgcggctgaatacgat------ +cagaccacctacggctcgtctaccaaccccatgtatgtttcagatacagtcacttttgt---taatgtggcg +acgggtgcccaggccgttgcccgatcccttgattggtccaaggtcactttggacggccggccacttactacc +at-----acagcagtactccaagacattttatgtac-tgccacttcgtggcaagctttccttttgggaagct +ggcacgactaag--gctggctacccctacaactataacactactgctagtgaccagattctgatcgagaatg +cagccggtcac------cgtgttgccat-atctacttataccactagtcttgg--------------tgccg +gccctgtgtctgtttc-tgcggtcggcgttcttgccccgcattctgctttagctgtgcttgaagatactatt +gact---------atcctgcccgtg----cccatactttcgatgacttctgccctgagtgccgcaatc---t +cggcttgcagggctgtgctttccagtc--------tactgttgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattaa-tt-----c-cccccttt------gt +gccc-cct--------tc-taaa-ct-tc----gc-tc-tgt----------------tatt-t-------c +tcttttct----gcg---------------ttccg-cgcctcccg---------------------grwaaa +aaaaar----------------aaaaaaaaaa---------------------------------------- +------------------------------------------aaa--------------------------- +------------------------------------------------------------------------ +----------- +>MF444056.1/17178/1-7178 |Hepeviridae isolate HEPAC68, complete genome +--------------------------------------------------------------ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcatcactactgccattgag---caagctgctctggc +tgcggccaattctgccttggcgaatgctgtggtggttcggccgtttttatcccgtttacagaccgagatcct +tattaatttgatgcaaccccggcagctggtctttcgacctgaggtgctctggaaccatcccatccaacgtgt +tatacataatgaattggagcagta---ctgccgggccc-gggccggtcgctgtctggaaattggagctcatc +caaggtcaatcaatgataatcctaatgttctacatcggtgctttttacgacccgtcgggagggacgtccagc +gctggtattccgcccccacccgtggccccgcggccaactgccgccggtctgcgctgcgtggcctcccccctg +tcgaccgcacctactgttttgatggattctcccgttgtgctttcgctgcagagactggtgtggccctctatt +ctctgcatgatctctggccggctgacgtcgcggaggctatggcccgacatgggatgacacgtttatatgccg +cactacacctc-cccccagaggtactgctaccaccaggcacttatcacacaacctcgtatcttttaatccac +gacggtaaccgcgccgttgtaacttatgagggtgatactagtgcgggctataaccatgatgtttctatactc +cgcgcgtggatccgcacgaccaaaatagttggtgaccacccgttggttatagaacgagtgcgggccattggc +tgtcacttcgtgctgctgctcaccgcagcccctgagccgtcacctatgccatacgtcccgtatcctcggtca +acagaggtgtacgttcgttctatatttggccctggc---------ggctccccgtctctgttcccgtcagct +t----------gctccaccaaatcca-catttcatgccgtcccggttcatatctgggaccggctcatgctct +ttggcgccaccctagacgaccaggcgttttgttgctcacggcttatgacatacctccgtgggattagttata +aggttactgttggcgcccttgttgctaatgagggttggaatgcctctgaagatgccctcaccgctgttatca +ctgcagcgtacttgaccatctgccaccagcgttacctccgcacacaagctatatctaagggcatgcgccggc +tagaggttgaacacgctcagaagttcatcacaagactttatagctggctatttgaaaaatc---------tg +gccgtgactacatccccggccgtcaacttcaattttatgcacagtgccgccgttggttatctgcaggtttcc +atcttgacccgcgggtgcttgtttttgatgagtcagtgccctgt---cgctgtaggacgttccttaagaa-- +----agtcgcgggcaaattctgctgctttatgaagtggttggggcagga------atgcacctgcttcttgg +----------------agccggccgagggtctggttggtgatcatggc--------catgataatgaagcct +atgagggttcggaggttgatcaggctgagcccgcacaccttgatgtttcggggacatacgctgttcatgggc +gccagcttgaggccctgtacagggcacttaatatccctcatgacatcgccgctcgggcgtctcgcctaacgg +ccaccgttgagcttgctgcaggtccagaccgtttggagtgccgtactgtactagggaacaagacttttagga +caacggtggtcgacggcgcccatctcgaagcaaatggccc------------------------cgagcagt +atgttctttcatttgacgcctcccgccagtccatgggggccgggtcgcatagtctcacctacgagctaactc +ctgctggcttgctggtgaagatctcgtcc-------aacggtctagactgtaccgcgacgttcccc---cca +ggcggtgctcccagtgccgcaccaggtgaggtagccgccttttgcrgcgccctttataggtataataggttc +acccagaggcattcgctgacaggcggcttgtggctgcatcctgaggggctgttgggcattttcccccctttc +tcacccgggcatctttgggagtccgctaaccctttctgcggagagggtactttatatacccggacttggtct +acatcaggtttttctagtgacttctccccccccgaggcagccgcccctgcgccggttgctacctt----ggg +gccgcccc---accctacaccccctgctagtgacat-----------------ctgggtgct---------- +---------gccgtcgcct----tctgaagagc--------------atcagattgatgcagcgcctgttcc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcttgctcagccacctagc +cctgttaggcctggg-------------------------------------ggccccgtgcgtaagccacc +gacaccgcc--------------------------------------accgtctcgtacccgccgcc----- +-------------------tcctttacacttacccagacggcgccagggtgtatgcggggtcactgtttgag +tctagctgtgactggctggttaacgcgtcaaaccccggccatcgccctgggggtgggctatgccatgccttc +taccaacgctaccccgagtcgt------tccatccgactgagtttattatgcgtgacgg---cctcgccgcg +tacaccttgactccccgccctattattcatgcggtggctcccgactatagggttgagcagaayccaaagaga +cttgaggcggcatatcgggagacctgttctcgccgcggtaccgctgcctacccactcttaggctcaggtatc +tatcaggtccctgtcagcctaagtttcgatgcttgggagcgtaaccaccgccctggggacgagctttatctg +actgaccccgctgctgcc-------------------------------------------------tggtt +tgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------gccggcccttactataaccrrggatacagc +cc------------gtacggccaacttggcactggagattg------------atgccgccacggaagttgg +ccgtgcttgt---gctggctgcacagttagtccaggggttgtacactaccaatttaccgctggcgtccctgg +ttcggggaagtctaggtctatacagcagggrgatgtygatgtggttgttgttcccacccgggagctccgcaa +tagctggcgtcgccggggctttgcggcctttacaccccatacggcggcccgtgttactttgggccgccgtgt +tgtcattgatgaggccccgtccctcccgccacacttgctgctgcttcatatgcagcgggcctcgtcggtcca +ccttcttggcgacccgaaccagrtccctgctatagactttgagcatgccggcctgrtccccgcaatacgccc +tgagcttgcacccaccrgctggtggcatgtcacacaccgttgccccgctgatgtgtgtgagctcatacgcgg +agcctatccgaagatccagacyacgagccgtgtgctgcggtcattattttggaatgaa------cccgccac +cgggcaaaagttagtcttcacgcaggccgccaaggctgctaaccctggtgcgatcacagtccacgaggccca +gggagctacatttacagagaccacaattatagctacagctgacgccaggggccttatccagtcgtctagggc +ccatgccatagtygcactcacccgccacacagagaagtgcgttatattggatgcccccggcctgttgcgcga +agttggcatatctgacataattgttaataacttc------------------------------tttcttgc +cggtg--gggaggtgggccatcatcgcccctctgtgataccccgtggcagccctggtcagaaccttgagac- +-----attgcaggccttcccgccttcttgccagattagcgcttatcatcaactagctgaggagttgggccac +cgaccggctcctgtcgctgctgttttgcccccttgccctgagcttgagcagggtttgctgtatatgccgcag +gagcttacagtgtccgatagcrtgctggttttcgaactcacggatatagttcattgccgcatggccgcccct +agtcagcggaaggcygtcctatcgacactcgtggggaggtatggtcgtagaactaagctgtacgaggccgcg +cactctgatgtccgtgaatccttagccaggttcatccccactatcggacctgttcaggccaccacatgtgag +ctgtatgagttggtcgaggccatggtagagaagggycaggatggctctgccgtgttggagcttgacctctgc +aaccgcgacgtctcgcgtattacattcttccaaaaagactgtaataagttcaccaccggcgagaccattgct +cacggtaaggtcggacagggtatttcagcttggagtaagaccttttgcgccctgtttggcccttggttccgc +gccattgagaaagaaatactggccctactcccgcctaacatcttctatggcgacgcctacgaggagtctgtg +tttgctgcagccgtgtctggggcggggtcatgcatg---gtatttgagaatgatttctcggagtttgacagt +actcagaataacttctccct------------------yggccttgagtgtgtagtcatggaggaatgcggc +atgcctcagtggttaatccggctgtaccatctggttaggtccgcctggatcctacaggcgccgaaggagtcc +cttaaaggcttttggaagaagcaytctggygagcccggtaccctgctctggaacaccatctggaatatggcg +atcatagcacactgctatgaatttcgcgatttcagagtcgctgcctttaagggcgacgactcagtggtcctt +tgtagcgactatcgccagagccgcaatgccgcggccctgattgcaggctgcgggcttaaattaaaggttgat +taccgtcctatcgggttgtatgctggcgtagtggttgcccccggcttggggacactgcccgatgtagtgcgc +tttgctggccggctgtctgagaagaattggggccctggcccggagcgggctgagcagctgcgccttgcggtt +tgtgattttcttcgagggttgacgaatgttgcgcaggtctgtgttgatgttgtatcccgtg-------ttta +cggagttagccctggactggtacataacctcattggtatgttgcagaccattgctgatggcaaggcccactt +cacagagactgtcaaacctgtactcgaccttacaaactccataatacatcggatagaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gttgttgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgactggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgatgtcgtatcacaacccggggctggagctcgccctc +ggcagccgccccg---------------ccccctcggctccacttggcgtgaccagtccca----------- +------gcgcccctccgctgcctcccgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgctgtatcaccggcccccgacacagcccctgtgcctgacgtcgattctcgcggcgccatattgcgacgaca +gtataatttatctacatccccgctcacgtcatccattgcttcgggtactaatttggttctttatgctgcccc +gctgaaycctcttctacctcttcaggacggcaccaatacacatattatggctaccgaggcatctaactatgc +ccagtaccgggttgttcgggccacgatccgttatcgcccgctggtgcctaacgccgtcggtggctatgcaat +ttctatatcgttttggcctcaaaccaccaccacccccacatctgtggatatgaattcyattacctctaccga +tgttaggattctggttcagcccggtattgcttccgaattggtcattcctagcgagcgtctccattaccgtaa +tcagggctggcgctctgttgaaacatcgggcgtggccgaggaggaggctacctctggcttggtgatgctctg +cattcatggctcccctgttaattcctatactaacaccccttacactggagcgcttgggctccttgactttgc +actagaacttgagtttaggaatttgacacccggaaataccaatacccgtgtatcccggtacacgagtacagc +ccgccaccggctgcgccgcggtgccgacggcaccgctgagcttactactacggcagccacgcgcttcatgaa +ggacctgcatttca---ccggtacgaac---ggggttggtgaggtgggccgtgggattgctttgacactgtt +caatcttgctgatacacttctcggcggtctgccgacagaattaatttcgtcggccgggggtcaactgttcta +ctcccgccctgtcgtctcagccaatggcgagccgactgttaaattatatacatctgttgagaatgcacagca +ggataaggggatagctatcccacatgacatagatttgggcgactctcgtgtggtgatccaggattatgacaa +tcagcacgagcaggaccggcccaccccttcgcccgccccgtctcgtcctttttcggttctccgcgccaatga +tgttttgtggctttc-----------------------------tctcaccgctgctgagtatgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctcagacactgtaacatttgt---caatgtggcc +acaggggctcaggctgtcgcccgttcccttgactggtctagggttaccctggacggccgccctcttaccacc +at-----tcagcagtactctaagacattttatgttc-tcccacttcgcgggaagttatctttttgggaggct +ggcacaaccaaa--gccggctacccttataattataacacaactgctagtgaccagatcctgattgaaaacg +cggctggccat------cgtgtcgctat-atctacctatactactagcttggg--------------tgctg +gccctgtgtcagtctc-tgcggttggtgtgctagccccacattcggcccttgctattcttgaagacactgtt +gact---------atccagcccgtg----ctcacatttttgatgacttctgtccggaatgccgtgccc---t +gggtctgcaagggtgtgcttttcaatc--------tactatcgctgagctccagcgtct------------- +--------taagatgaaggtaggcaaaacccgggagttttaattaa-tt--------ctt-ctt------gt +gccc-cct--------tc-acgg-ttct-------------------------------------------- +------------------------------------gctcactt---------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444057.1/17274/1-7274 |Hepeviridae isolate HEPAC28, complete genome +--------------------------------------------------------------------tgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatcccgtgttcagactgatattct +tattaatttgatgcaaccccggcagcttgtgttccggcctgaagttctttggaatcatcctatccagcgggt +catacataatgagcttgagcaata---ctgccgagccc-gcgccggccgctgtttagaggtgggcgctcatc +caagatctatcaatgacaatcccaatgtcctgcaccggtgctttcttcgcccggtcgggagagacgttcagc +gctggtattctgcccccacccgtggtccagcggctaactgccgccgttctgcgctacgtggtttgccccctg +tcgatcgcacatattgcttcgatgggttctcccgctgcgcctttgccgctgagaccgggattgctttgtact +cactgcatgacctctggccctcggacgttgcggaggccatggctcgccacgggatgacgcgcttgtatgctg +ccctccaccta-cctcctgaggtcctgttaccacctggcacttaccacacaacctcctatcttctgattcac +gatggcaaccgtgccgtcgtgacttatgagggtgatactagtgcgggctataatcatgatgtgtccatactc +cgtgcatggatccgcaccaccaaaatagttggtgatcaccccctggtaatagagagggtacgcgccatcggc +tgccattttgttctactcctaactgcagcccccgagccatccccaatgccttatgttccgtaccctcgttca +acagaggtgtatgttagatccatatttggtcctggt---------gggtcgccctctctcttcccgtcagcc +t----------gctctaccaagtcta-cattccacgccgtcccggtccacatctgggaccggctcatgcttt +ttggtgccaccttagatgaccaggccttttgctgctcgcggctcatgacctatctccgcgggattagctata +aagtgactgttggcgcactcgtcgccaacgaaggctggaatgcctcagaggatgcgcttaccgctgtgatta +ctgcagcgtacctgactatttgccatcagcgctacctacgaacacaggccatttccaaaggcatgcgtcggc +tagaggttgaacatgcccagaagtttatcacaaggttgtatagttggctgtttgaaaagtc---------ag +gccgcgactacatccccggtcgccagctccagttttatgcgcaatgccgccgctggctctcggccggctttc +acctggaccctagagttctcgtttttgatgaggcgattccttgc---cgctgccggagctttttaaagaa-- +----ggttgctgggaaattttgttgttttatgaaatggttggggcagga------gtgcacctgttttctgg +----------------agccagaggaaggcctggttggtgactgtggc--------catgataacgaagcct +atgagggttctgaggtggaccccgccgagcctgctcaccttgacgtttccgggacctatgcggtccacggcc +gtcagcttgaggctctatatagagcgcttaatatcccagatgacattgcagctcgtgcgtcacgtctgacgg +ctactgtagaacttgccgccagcccaggccgactcgagtgccttacggtgcttgggaataagacttttcgca +catcaataactgatggtgcccacctcgaagccaacggccc------------------------cgagcagt +acgtcttgacatttgatgactctcgccaggctatgggggctgggccccacagcctcacgtatgaacttgtcc +ctgccggtttgcaggtcaaaatatcttct-------aatggcttggattgtaccgctatattcccc---cct +ggtggggcaccgagtgccgcaccaggtgaagtggcggctttctgtagcgccctatataggtacaataggttc +acccagcgccattcgctgaccggcgggctgtggctgcaccctgaggggcttcttggcctgttcccccctttc +tctccggggcatctttgggagtctgcaaaccccttttgtggtgagagcacactttatacacgaacttggtcc +acatctggcttctctagtgacttctctccacccgaggcggtttacgccgccccagtacccgacgt----gag +gccaccctcgggtgtctcctcgtctgctagtgatat-----------------ctgggtgtt---------- +---------cccaccgccc----tctgagaggt--------------cagcgatcgcaccgccgcccgtagc +cccggttrgtaagccagctgg---------------------------------------cccgcc------ +------------------------------------------------------------------------ +-tagtccttc-------------------------------------------------------------- +-------------tacatcc----gggcccctcgcccgtgagccgccyacaccaccatcggctctaactccg +g---------------------------------------------tcrgtggtccagctaacccgtctagc +ctcactatatatagg-------------------------------------cctcccgtccgtaagccgcc +cacaccgcc--------------------------------------accggcccgtactcgccggc----- +-------------------tcctttacacataccctgatggggccaaggtgtatgcaggttctttgtttgag +tcagattgtgattggctggttaacgcatctaaccctggccaccgtcctggcggtggcctctgtcatgcattt +taccagcgcttcccggagtcgt------tccatccgactgattttgtcatgcgtgaggg---tcttgccgca +tataccctgagtccgcgccctatcattcatgctgtggctcccgactatagggttgagcagaatcccaagagg +cttgaggcggcatatcgtgagacctgctcccgtctcggcacagctgcttaccctctactggggtcaggtatc +taccaggtccccgtaagtctaagcttcgacgcctgggagcgcaatcaccgcccaggtgatgagctatatctt +actgagccagctgccgcc-------------------------------------------------tggtt +tgaggccaataagccaaccca--------------------------------------------------- +------------------------------------------gccagctctaacaattactgaggacaccgc +tc------------gcacagctaaccttgcgcttgagattg------------actctgctactgaggttgg +ccgagcctgc---gccggctgtactgttaaccccggtattgtccactaccagttcaccgccggggttcctgg +ctctggaaagtccagatcyatacagcagggrgatgtygatgtcgtggttgtgccaactcgtgagcttcgtaa +cagttggcggcgccgcggcttcgctgctttcacaccccacacagcagctcgcgttactgccggccggcgtgt +tgtgatagacgaggcaccttcgcttccaccgcacttgctgttgctccatatgcagcgggcctcatcggttca +tctccttggtgatcccaaccagatccctgccattgactttgagcacgccggtttggtcccagcgattcgccc +cgaactagctcctactagttggtggcatgttacccaccgttgccccgccgatgtgtgtgagcttatacgcgg +ggcctaccccaagattcagacgaccagccgtgtgttgaggtctttattttggaacgag------cctgcggt +gggtcagaagctggttttcacgcaggctgccaaggcggccaaccccggcgcaatcactgtccatgaggccca +gggygccacattcactgagactactatcatagcyacggccgatgctagaggtctcatccaatcctcccgcgc +acatgccatcgttgcgcttactcgccacacagagaaatgtgtcatcctcgacgctcctggcctgctgcgtga +ggttggtatttctgatataattgtcaataacttt------------------------------ttcttggc +tggtg--gtgaaatgggtcaccaccgcccctctaccataccgcgcggcaatccagaccaaaacttggacac- +-----cctacgggcgtttcctccgtcctgccaaatcagtgcctatcaccaactggctgaggagctgggccac +cgaccggccccagtggccgccgtcctgcccccttgccctgagctcgagcaggggctactctacatgccgcag +gagcttacggtgtccgatagtgtcctaacttttgaactcacggacatagttcactgtcgtatggccgccccc +agtcaacgtaaggcggttctttctacgctcgtcggcaggtacggccgccgaacgaagctgtatgatgcggcc +cattctgatgttcgtgagtccttagggaggtttatccctactatcggaccggtccaggccaccacatgcgag +ctatatgagctggttgaggccatggtggagaagggccaggatggctccgccgtgcttgagctcgacctctgt +agccgggatgtctcacgtattacattcttccagaaggactgtaataaatttacaacaggtgagaccattgcc +catggcaaggtgggccagggcatttcggcttggagcaagaccttctgcgctttgttcggcccgtggttccgt +gccattgagaaggrgattctggctctacttccacccaacattttctacggcgatgcctacgaggagtcagtg +ttttctgcagccatttctggggccggctccagtatg---gtttttgagaacgatttttctgagtttgatagt +acccaaaataatttttctct------------------tggccttgagtgtgtcattatggaagagtgtggc +atgccccagtggcttattcgactgtatcatttagttagatcagcttggactctgcaggccccgaaagagtct +ttgaaaggcttctggaagaagcattcyggcgagcccggcasmctcctttggaataccgtctggaacatggcg +atcatagcacattgctatgagttccgtgacttgagggtggcagcgtttaagggggatgattcagtggttctt +tgcagtgattatcgccagagccgcaatgcggctaccttgatagccggttgtgggttgaaattgaaggttgat +taccggcctataggtttgtatgccggcgttgtagtggccccgggcctcggggcactccctgatgttgtccgg +ttcgccggtcgactatctgagaagaactggggcccgggtcccgagcgcgctgaacagttgcgtttagcagtt +tgtgatttccttcgagggctgacgaatgtggcgcaggtatgtgttgatgttgtgtcccgtg-------ttta +tggggtcagccccgggctggtgcataaccttattggcatgctacagactattgctgatggaaaggcccactt +tactgagactgtcaaacctgtgctagatcttacaaattctatcatacagaggttggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggttgttct +gctgctgctcttcgtgtttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcttaycgcaacccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggttcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtagatctacccca---------actggggctgcgccgttrac +tgctgtttcaccagcgcctgacacggctccagtccctgatgtagactctcgtggtgccatcttgcgccgcca +gtataatttgtccacttctcctttaacttcatctgttgcttctgggactaatcttgtcttgtatgctgcccc +gctcaatcctcttttgccccttcaagacggcacgaatactcacatcatggcgactgaggcgtctaattacgc +tcagtatcgggttgtccgggctacgatccgctatcgccctttggtgccgaatgccgtcggcggttatgcaat +ttctatttccttttggcctcagactacaactacacccacctctgttgacatgaattctatcacttctactga +tgtaaggattttagtccagcctggcatagcctctgagctggtcatcccgagtgagcgccttcactatcgtaa +tcaaggctggcgctctgtcgagacatcgggtgtggccgaggaggaggcgacgtctggcctggtcatgctttg +tattcatggttctcctgttaattcctataccaacacgccctatactggggcattagggctccttgactttgc +actcgagctcgagtttagaaatttgacccctgggaacactaacacccgtgtgtcccgatacactagcacagc +tcggcaccgtttgcgtcgtggtgccgatgggacagctgagcttacaactaccgcagccacacgttttatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggcgaggtgggccgcggtatagctttaacgctatt +taatcttgctgatacacttctcggcgggttgccgacagaattgatttcgtcggctggaggtcaactgtttta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacttctgtcgagaatgcacagca +ggacaagggcattgctataccgcatgatatagacttaggggattcccgtgtggttatacaagactatgataa +ccaacatgagcaggaccggcctaccccgtcgccggccccgtcccgccccttttcagtcctccgagccaacga +tgttctgtggctctc-----------------------------cctgactgcggctgaatatgat------ +cagaccacctacggctcgtccaccaatcccatgtatgtttcaratactgtcacatttgt---taacgtggcg +acgggtgcccaggccgttgcccgatcccttgattggtccaaggtcacattagatggtcgaccactcaccacc +at-----ccagcagtattctaagacattttatgtgc-tgccgcttcgtggcaagctttccttttgggaagct +ggtacgactaaa--gctggctacccttataattataatactactgctagtgatcagattctgattgagaatg +cagccggtcat------cgtgttgctat-atctacttacactactagtcttgg--------------cgccg +gccctgtgtctgtttc-tgcggtcggcgttcttgccccgcactctgttttagccgtgcttgaagatactatt +gatt---------atcccgcccgtg----cccacacttttgatgatttttgccctgagtgccgcaatc---t +tggcctgcagggctgtgctttccagtc--------tactgttgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattta-at----tc-cccc-ttt------gt +gccc-cct--------tc-taaa-tc-tt----gt-tc-agt----------------tatt-t-------c +ttat-------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444058.1/17432/1-7432 |Hepeviridae isolate HEPAC18, complete genome +---------------------------------------------------------------gtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccatagag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggtccggccgtttttatctcgtgttcaaactgagatcct +tattaacctgatgcaaccccggcagctcgtgtttcggcctgaagtcctctggaaccacccgatccagcgagt +tatacataatgagctggagcaata---ctgccgagccc-gcgctggccgttgtcttgaggtgggcgctcacc +caagatctattaatgacaaccccaatgtcctacaccggtgctttctccgcccggttgggagagacgtccagc +gctggtattccgcccccacccgtggtccagcggccaattgccgccgctctgcgctacgcggcttgccccctg +tcgatcgtacatattgcttcgatgggttttcccgctgcgcctttgccgccgagaccgggatcgctttatact +cactgcatgacctttggccctcggacgttgcggaggctatggcccgccacgggatgacgcgcctgtatgccg +ccctccactta-ccccccgaggttttgttaccacctggcacctatcatacaacatcttatcttttgattcac +gacggcagtcgcgccgtcgtgacttatgagggggacaccagtgcaggttataaccacgatgtgtctatactt +cgtgcatggatccgcaccactaaaatagttggtgatcacccactggtaatagagagggtccgcgccatcggc +tgccattttgttttgcttttaactgcagcccccgagccatccccaatgccttatgttccgtaccctcgttca +acagaggtgtatgttagatccatatttggcccgggt---------gggtcgccttctcttttcccatcagcc +t----------gctctaccaagtcta-cattccatgctgtcccggttcatatctgggaccggctaatgcttt +ttggtgccaccttagatgatcaggccttttgctgctcccggttaatgacctatctccgcgggattagctata +aagtgaccgttggcgcgctcgtcgccaacgagggctggaacgcctcggaggatgcgcttaccgctgtgatca +ctgcagcgtatttgactatttgtcatcaacgctacctacgaacacaggccatttctaaaggtatgcgtcggt +tggaggtcgagcatgcccaaaagttcattacaaggctatatagctggctgtttgaaaagtc---------ag +gccgtgactacatccccggccgccagctccagttttatgcrcagtgccgccgctggctctcggccggcttcc +atttggaccctagagttctcgtctttgatgaggcggtcccctgc---cgctgtcggagcttcctaaagaa-- +----agttgctggaaaattctgctgttttatgaaatggctagggcagga------gtgcacctgttttctgg +----------------aaccagcagaaggcctggttggtgattgcggc--------catgataacgaggcct +acgaagggtccgaggtggactccgccgagcctgcccaccttgatatttccgggacctatgcggttcacggtc +gtcagcttgaagctctatatagagcgcttaatatcccagatgacattgcagctcgcgcgtcacgcctgacgg +ccactgtggaacttgccgccagcccaggccgaattgaatgtcgtacggtgcttgggaataagactttccgta +catcaataattgatggtgcccatctcgaggccaacggtcc------------------------cgagcagt +acgtcttgacatttgatgattcacgccaggcaatgggggctgggcctcatagcctcacgtatgaacttgtcc +ctgctggtctgcaggttaaaatatcttct-------aatggcttggattgtactgctgtattcccc---cct +ggtggggcaccaagcgctgcaccgggtgaagtggcggccttctgcagcgctctatacaggtacaataggttc +acccagcaccattcgctgaccggaggactgtggctacaccctgaggggcttcttggcctgtttccccctttc +tccccggggcatctttgggagtctgcaaaccccttctgcggtgagagtacactttatacacggacttggtct +acatctggtttttctagcgacttctctccacccgaggcggcttatgctgccccggtccctgacat----agg +gttaccctcgggtactccctcgtctgctagcgatat-----------------ctgggcgtt---------- +---------tccaccgcct----tctgaggggt--------------cggcgactgttccgccacctgtaac +cccggttagtaagccaactaa---------------------------------------cccgcc------ +------------------------------------------------------------------------ +-cagtcttgt-------------------------------------------------------------- +-------------tgctccc----aggtctcccgtccgtgagccacctacaccacagccggcccctaccccg +t---------------------------------------------tcagcgagccagctaaccagcctagt +cttaccacacctagg-------------------------------------ccccccgcccgcgagccgcc +tgcgcctcc--------------------------------------aacgacccgttctcgccggc----- +-------------------tcctttacacatatcctgatggggccaaggtgtatgcaggctctttgtttgag +tcggattgtgactggctggttaatgcatctaaccctggccaccgccctggtggcggcctctgccatgcgttc +taccagcgcttccctgagtcgt------tccatccgactgattttgtcatgcgtgaagg---ccttgccgca +tacactttgagcccgcgtccgatcattcatgctgtggcccctgactacagggttgagcagaaccccaaaaga +ttagaggcggcataccgtgagacttgctctcgccttggcacagctgcctacccgctactgggatcaggaatt +tatcaggtccctgtgggtttaagctttgacgcctgggagcgtaaccaccgcccaggcgatgaactttacctt +actgagccggctgccacc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------accagccctaacaattactgaggacactgc +cc------------gtacagctaatcttgcgcttgagattg------------actctgccactgaggtggg +tcgtgcttgc---gccggctgcactattaatcccggggttgtgcactaccagttcaccgctggggtccctgg +ctccgggaagtctaggtcyatacagcarggggatgtygatgttgtcgtcgtgccaactcgagagctccgtaa +cagctggcgacgtcgcggttttgctgcttttacaccccacacagcagcccgtgtcactgccggccggcgtgt +ggtgatagatgaggcaccttcgcttccaccgcacttgctcctccttcatatgcagcgagcttcatcggtcca +ccttcttggtgatcccaaccagatccctgccattgactttgaacacgccggtctggttccagcgattcgccc +tgagctagcccctactagttggtggcatgtcacccatcgctgccccgccgatgtgtgtgagctcatacgcgg +ggcttacccaaagattcagacaactagccgtgtgttgagatctttattctggaatgag------cctgcggt +gggtcagaggctggttttcacgcaggcagccaaggctgctaaccctggtgcaattactgttcatgaggccca +gggtgccacatttactgagactaccataatagccacggctgatgctagaggtcttattcagtcttctcgtgc +acatgccatcgttgcgcttactcgccatacagaaaaatgcgtcattctcgatgctcctggcttacttcgtga +ggtcggcatttctgatataattgttaataatttc------------------------------ttcctggc +tggtg--gcgaagtgggccaccatcgcccctctactataccccgcggtaacccagaccagaatttagacac- +-----cctacgagcatttcctccgtcctgccaaattagtgcctatcaccagcttgctgaagagctgggccat +cggccggctccagtggccgccgtcctgcccccttgccctgagcttgagcaggggttactctacatgccgcag +gagcttacggtgtccgatagcgtcttagtttttgagctcacggatatagttcactgccgtatggccgccccc +agtcaacgtaaggcggtcctctctacgctcgtcggcaggtacggccgccgaacgaagctgtatgaagcggcc +cattcagatgtccgcgagtctttaaggaggtttatccctactattggaccggtccaggccacaacatgcgag +ctatacgagctggttgaggccatggtagagaagggtcaggacggctccgctgtgctcgagcttgacctctgt +agccgtgatgtctctcgtatcacgtttttccagaaagattgtaataaatttacaacaggtgagaccatagcc +cacggcaaggtgggccagggcatttcggcttggagtaaaaccttctgtgctctattcggcccgtggttccgt +gctatcgagaaggagattctggctctactcccacccaatattttctatggtgatgcctatgaggagtcagtg +ttttctgcagccatttctggggctggctccagtatg---gtttttgagaacgatttttctgagtttgatagc +acccaaaacaattattctct------------------aggccttgagtgtgtcattatggaggagtgtggc +atgccccagtggcttatccgtctgtatcacttagttagatcagcctggaccctgcaagccccgaaagaatcc +ttgaaaggtttctggaagaagcattcyggygagccyggkaccctcctttggaacaccgtctggaacatggcg +atcatagcacactgctatgaattccgtgatctgagagtggcggcgtttaagggggatgattcagtggttctc +tgtaatgactaccgccagagccgtaatgcagctaccctgatagccggatgtgggttgaaattgaaggctgat +taccggcctataggcctgtatgctggggttgtggtggctccgggcctcggggcacttccagatgttgtccgg +tttgctggtcgattatctgagaagaactggggcccgggccctgaacgcgccgaacagttgcgccttgcagtt +tgtgacttcctccgaaggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +cggggttagccccgggctggtgcataaccttattggcatgctacagactattgctgatggaaaggcccactt +tactgagactgtcaagcctgtgctggatcttacaaactctatcatacagaggttggaatgaataacatgtc- +t----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gctgctgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcaacggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtttcacaatccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgttaac +tgctgtctcaccagcgcctgacacggccccagttcctgatgttgactctcgtggcgccatcctgcgccgtca +gtataatytgtccacttcccctttaacttcatctgttgcctctggaactaatcttgttttgtatgctgcccc +gcttaaccctctcctgcctctccaagatggcaccaatacccacatcatggcgactgaggcgtctaattacgc +tcagtaccgggttgttcgggccacaatacgctatcgccctctggtgccgaatgccgtcggcggctatgcgrt +ttctatctccttctggccccagactacgactacacccacttctgttgatatgaactctattacttctacaga +tgttaggattttagtccagcctggaatagcctccgagttggtcatcccgagtgagcgccttcactatcgtaa +tcagggttggcgctctgttgagacatcgggtgtggccgaggaggaggcaacatcaggtttggttatgctttg +tattcatggttcccctgttaattcttataccaatacgccctatactggggcattggggcttcttgattttgc +acttgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgttatactagtacagc +ccggcaccgtttgcgccgcggtgccgatgggacggctgagcttacaaccactgcagccacacgttttatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggagaggtgggccgtggtatagccctaacgctatt +taatcttgctgatacacttctcggcgggctgccgacagaattgatttcgtcggctgggggccaactgtttta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgttgagaatgcacagca +ggacaaaggcattgctataccacacgacatagacttaggagagtcccgtgtggttatacaagactatgataa +ccaacatgaacaagaccggcctactccgtcgccggccccgtctcgccccttttcagtccttcgagccaatga +tgtcttatggctttc-----------------------------tctgactgcggctgaatatgac------ +cagactacttatggttcgtcgaccaaccctatgtatgtctcagatactgtcacatttgt---taatgtggct +acaggtgcccaggctgttgctcgatcccttgactggtccaaggtcaccttagatggccggccactcactacc +at-----tcagcagtactccaagacattttatgtgc-tgccgcttcgtggcaagctctccttctgggaggct +ggtacgactaag--gctggctacccctacaattataacactactgctagtgaccagattctgatcgagaatg +cagccggtcac------cgtgttgccat-atctacttacactactagtcttgg--------------tgccg +gccctgtgtctgtttc-tgcggtcggtgttcttgctccgcactctgctttagctgtgcttgaagatactatt +gact---------accctgcccgtg----ctcatacttttgatgatttttgccctgagtgtcgcaatc---t +cggtttgcagggctgcgccttccagtc--------taccattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattaa-tt----cc-cc---ttt------gt +gccc-cct--------tc-taat-ttcc--------tc-tgtt---------------a-tt-c-------t +tctattct----gcg---------------ttccc--gctccgaa---------------------aagaat +attttactg-----------ccgcgaaaaaaa---------------------------------------- +------------------------------------------taataaacgccctggatgctctgtcgcggt +cgccgatctttggagccgaaagtaatatatttctccgcgtattt---gtgatggttagttccacattggtac +tgcttagctca +>MF444059.1/17267/1-7267 |Hepeviridae isolate HEPAC15, complete genome +--------------------agctctg-----agtc-tctata-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggtccggccgtttttatcccgtgttcaaactgatatcct +tattaacttgatgcaacctcgacagcttgtgttccggcccgaagtcctctggaatcatccgatccagcgagt +tatacataatgagctggagcaata---ctgccgagccc-gcgctggccgctgtcttgaagtgggcgcccacc +caagatctattaatgataaccccaatgttttgcaccggtgctttctccgcccggttggaagagacgtccagc +gctggtattccgcccccactcgtggtccagcggctaattgccgccgttctgcgctacgcggcttgccccctg +tcgatcgcacatattgcttcgacgggttctcccgctgcgcttttgccgctgagaccgggatcgctttatact +cactgcatgacctttggccttcggatgtcgcggaggctatggctcgccacgggatgacgcgtttgtatgctg +ccctccaccta-ccccctgaagttctgttaccacctggaacctaccacacaacctcctatcttctgattcac +gacggcaatcgtgccgtcgtgacttatgagggggatactagtgcgggttataaccacgatgtgtctatactt +cgtgcatggattcgcaccactaaaatagttggtgatcacccgctggtaatagagagggtccgcgccattggc +tgccattttgtcttactccttactgcagcccccgagccgtccccaatgccttatgttccgtaccctcgttca +acagaggtgtacgttagatccatatttggtcctggt---------gggtcgccttctctcttcccatcagcc +t----------gttctaccaagtcta-cattccatgccgtcccggtccatatctgggaccggcttatgcttt +ttggtgccaccttagatgaccaggccttttgttgttcgcggcttatgacatacctccgcggaattagttata +aagtgaccgttggcgcacttgtcgccaacgaaggctggaatgcctcggaggatgcgctaaccgctgtgatta +ctgcagcgtatctgactatttgtcatcagcgctacctacgaacacaggccatttctaaaggcatgcgtcggc +tagaggttgagcacgcccagaaatttatcacaaggctatatagctggttgtttgaaaagtc---------ag +gccgcgattacatccccggtcgccagctccaattttatgcgcagtgccgccgctggctctcggctggcttcc +atctggaccctagggttctcgtctttgatgaggcggtcccctgc---cgatgccggagctttctaaagaa-- +----ggtcgccggaaaattttgttgctttatgaagtggttggggcagga------gtgcacttgttttttgg +----------------agccggcggaaggcctggttggtgactgtggc--------catgataatgaggcct +atgaggggtctgaggtggaccccgccgagcctgctcaccttgatgtctctgggacttatgcagtccacggcc +gtcagcttgaggccctatatagagcgcttaatatcccggatgacattgcagctcgtgcgtcacgtctaacgg +ctaccgtggagcttgccgccagtccaggtagactcgaatgccgtacggtgcttgggaataagatcttccgta +catcaataactgatggtgctcatctcgaggccaacggtcc------------------------tgagcagt +acgtcttgacatttgatgattctcgccgagcgatgggggctgggcctcacagcctcacgtatgaacttgtcc +ccgccggtctgcaggttaaaatatcttct-------aatggcctggattgtaccgccatattccct---cct +ggtggggcgccgagcgctgcaccaggcgaagtggcggctttctgtagcgccctatacaggtacaataggttc +acccagcgccattcgctgactggcgggctgtggcttcaccccgaggggctccttggcctgttcccccctttc +tccccggggcatctttgggagtctgcaaaccccttttgcggtgagagcacactttatacacgaacttggtcc +acatctggtttttctagcgacttctccccacccgaggcggcttatgccgccccagtccctgacat----gag +gttaacctcgggtgccccctcctccgctagcgatat-----------------ctgggtgtt---------- +---------tccaccacct----tctgaggggt--------------cggcgatcatttcgccgcccataac +cccggcctgtaagccaactaa---------------------------------------ttcgcc------ +------------------------------------------------------------------------ +-tggtcatac-------------------------------------------------------------- +-------------tacacct----aggccacccgtccgtgagccgcccacaccaccaccggccctaacccca +g---------------------------------------------ctagtaagccagccaatccgcctagc +cttactgcacctagg-------------------------------------ccccctgtccgcgagccgtc +cacaccgcc--------------------------------------atcggctcgcactcgccggc----- +-------------------ttctttatacatatcctgatggggccaaggtgtacgcaggctctttgttcgag +tcagattgttactggctggttaatgcatctaaccctggccaccgtcctggtggtggtctctgccatgcattc +taccagcgctttccagagtcgt------ttcatccgaccgattttgtcatgcgcgaggg---gctcgccgca +tatactttgagcccgcgtccgatcattcatgctgtggcccctgactatagggttgagcagaaccccaagagg +ctggaggcggcatatcgtgagacctgctcccgcctcggcacagctgcctacccactactagggtcagggatt +taccaagtccctgtaggtctaagctttgacgcctgggagcgtaatcaccgcccaggcgatgaactttacctt +actgagccagctgctgcc-------------------------------------------------tggtt +tgaagctaataagcctaccca--------------------------------------------------- +------------------------------------------gccagctttaacaattactgaggacaccgc +cc------------gcacagccaaccttgcgcttgagatcg------------attccgctactgaggtcgg +tcgtgcctgc---gccggttgcaccattaaccccgggattgttcactaccagttcaccgccggggttcctgg +ctccgggaagtctaggtctatacagcagggggatgtygatgttgtggtcgtgccaactcgcgagcttcgcaa +cagttggcggcgccgcggctttgctgcttttacacctcacacagcagctcgtgtcactgccggccggcgcgt +ggtgatagatgaagcaccttcgcttccaccgcacctgctgttgctccatatgcagcgagcctcatcagtcca +tcttcttggcgaccccaatcagatccctgccattgactttgagcacgccggtttggtcccggcgattcgccc +tgagctagcccccactagttggtggcatgtcacccaccgttgccccgccgatgtatgtgagctcatacgcgg +ggcctacccaaagattcagacgaccagccgtgtgttgagatctttattttggaatgag------cctgcgat +aggtcagaggctggtttttacgcaggcagccaaggccgccaatcccggcgcaattaccgttcatgaggccca +gggggccacgtttactgagactactattatagccacggccgatgctagaggtcttattcaatcttctcgcgc +acatgccatcgttgcacttactcgccatacagaaaagtgcgttattctcgatgctcctggcctattgcgtga +ggttggcatttctgatataattgtaaataacttt------------------------------ttcctggc +tggtg--gtgaagtgggccaccatcgcccttctaccatcccccgcggcaacccagaccagaacttagacac- +-----cctccaagcgttccctccgtcctgccaaatcagcgcttaccaccagttggctgaggagctgggccat +cgaccggctccagtggccgccgtcctgcccccctgccctgagcttgagcaggggttactctacatgccgcag +gagcttacggtgtccgatagtgtcctaatttttgaactcacggacatagttcactgtcgtatggccgcccct +agtcaacgtaaggcggttctttctacgctcgtcggcaggtacggccgccggacgaagctgtatgaagcggcc +cactctgatgtccgcgagtctttagggaggttcatccctactatcggaccagtccaggccaccacrtgtgag +ttatatgaactggttgaggccatggtggagaagggccaggacggttccgctgtgcttgagcttgatctctgc +aaccgtgatgtctcgcgtattacattcttccagaaggattgtaacaaatttacaacaggtgagactattgcc +catggtaaggtgggccaggggatttcggcttggagtaaaaccttctgtgctttatttggcccatggttccgt +gccattgagaaggagattctagctctgctcccacctaatattttctatggcgatgcctatgaggagtcagtg +ttctctgcggccatttctggggctggctccagtatg---gtttttgagaatgatttttctgagtttgatagc +acccaaaataatttctctct------------------cggtcttgagtgcgttattatggaggagtgtggc +atgccccaatggcttatccgactgtaccatctagttagatcagcctggattctgcaagccccgaaagagtct +ttgaaaggcttctggaagaagcattccggcgagcctggtactctcctttggaacaccgtctggaacatggcg +atcatagcacactgctatgaattccgtgatttgagagtggcagcgtttaaaggggatgattcagtggttctt +tgcagcgattaccgtcagagccgtaatgcggctactctgatagccggctgtgggttaaaattgaaggttgat +taccggcctattggtttgtatgccggcgttgtagtggctccgggcctcggggcacttcctgatgttgtccgc +tttgcaggtcgattatctgagaagaattggggtccgggccccgagcgcgccgaacagttgcgcctagcagtc +tgtgactttcttcgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtctcgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacagactatcgctgatggaaaggcccattt +tactgagactgttaagcccgtgctggatcttacaaactccattatacagaggttagaatgaataacatgtt- +c----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggtc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaatccggggctggagctcgcctta +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgccgtcgatctacccca---------actggggctgcgccgttaac +tgctgtttcaccagcgcctgatacggccccagtccctgatgttgactctcgtggtgctatcttgcgccgtca +gtataatttgtccacctctcctttaacttcatctgttgcctctggaactaatctcgtcttatatgctgcccc +gcttaaccctctcctgcctcttcaggacggcaccaacactcacatcatggcgactgaggcgtctaattacgc +tcagtaccgggttgtccgggctacaatccgctatcgccccttggtgccgaatgccgtcggtggttacgcaat +ttctatttctttctggcctcagactacaactacacccacctctgttgacatgaattccattacttctactga +tgttaggattttagtccagcctggcatagcctctgagttggtcatcccgagtgagcgccttcactatcgtaa +tcaaggctggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggcttggtcatgctttg +cattcatggctcccctgttaattcttatactaacacgccctacactggggcactggggctccttgatttcgc +acttgagcttgaattcagaaatttgacccctgggaacactaacacccgtgtgtcccgttacactagtacagc +ccggcaccgcctgcgtcgtggtgccgacgggacagctgagctcacaaccactgcagccacacgttttatgaa +ggacttgcatttca---ccgggacgaat---ggtgttggtgaggtgggccgtggtatagccctaacgctatt +taatcttgctgatacacttctcggtgggttgccgacagaattgatttcgtcggctggaggtcaactgtttta +ctcccgcccggttgtctcagccaatggcgagccaactgttaagttatacacctctgtcgagaatgcacagca +agataagggtattgctataccacacgatatagacttaggggattcccgtgtggttatacaagattatgacaa +ccaacatgaacaggaccggcctaccccgtcgccggccccatctcgtcccttctcagtccttcgagccaatga +tgtcttgtggctctc-----------------------------tctgactgcagctgaatatgac------ +cagactacttatggctcgtcgaccaatcctatgtatgtttcagacactgtcacatttgt---taatgtggcg +acaggcgctcaggctgttgcccgatcccttgattggtccaaggtcactttggacggccggccacttactacc +at-----ccagcagtactccaagacattttatgtgc-tgccgcttcgtggcaagctttccttctgggaagct +ggcacgactaag--gctggctatccttacaattacaacactactgctagtgaccagattctgattgagaatg +cagccggccat------cgtgttgctat-atctacttatactactagtcttgg--------------cgccg +gtcctgtgtctgtttc-tgcagtcggcgttcttgctccgcactctgctttagctgtgcttgaagatactatt +gatt---------atcccgcccgcg----cccatactttcgatgatttctgccctgagtgccgtaacc---t +cggcctacagggctgtgctttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-t-c--ctt------gt +gccc-c------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444060.1/17231/1-7231 |Hepeviridae isolate HEPAC9, partial genome +-------------------agatgtagc----acat-catatg-------------t-----ggtcgatgc- +---catggaggcccaccaattcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggttcggccgtttctatcccgtgttcagactgatatcct +tattaacctgatgcaaccccggcagctcgttttccggcctgaagttctttggaatcacccgatccagcgggt +tatccataatgagctggaacaata---ctgccgagccc-gcgctggccgctgtcttgaggtgggcgctcacc +caagatccatcaatgataaccccaatgttctgcaccggtgctttctccgcccggtcggcagagacgtccagc +gctggtattctgcccccactcgcggtccagcggctaattgccgccgctctgcactacgtggtttgccccctg +tcgaccgtacgtattgcttcgacgggttctcccgctgcgcctttgccgctgagaccggaattgctttatact +cactgcatgacttgtggccctcggacgttgcggaggctatggctcgccacgggatgacgcgattgtacgctg +ccctccaccta-ccccctgaggttctgttaccacctggcacttaccatacaacttcctatcttttgattcac +gacggcaatcgtgccgtcgtgacttacgagggtgatactagtgcgggctataatcacgatgtgtctatactt +cgtgcatggatccgcaccaccaaaatagttggcgaccacccactggtaatagagagagtccgcgccatcggc +tgccattttgtcctacttcttactgcagcccccgagccatccccaatgccttatgttccgtaccctcgctca +acagaggtgtacgttagatccatatttggtcctggt---------gggtcaccctctctttttccgtcagcc +t----------gctctactaagtcta-cattccatgccgtcccggttcatatttgggaccggctaatgctct +ttggtgccaccttagacgaccaggccttttgctgctcgcggcttatgacctatctccgcgggattagctata +aagtgactgttggcgcacttgtcgccaacgagggctggaatgcctcagaggacgcgctcaccgctgtgatta +ctgcagcgtatctgaccatctgccatcagcgctacttacgaacacaggccatttctaaaggcatgcgtcggt +tagaggttgagcacgcccaaaagtttatcacaaggttatatagttggctttttgaaaagtc---------ag +gccgtgactacatccccggtcgccagctccagttttatgcacagtgccgccgttggctctcggccgggtttc +atctggaccctagagttctcgtttttgacgaggcggtcccttgc---cgctgccggagcttcttaaagaa-- +----ggttgccggaaaattttgttgttttatgaaatggttgggccaaga------gtgcacctgctttttgg +----------------agccagcggaaggtctggttggtgattgtggc--------catgataacgaggcct +atgaggggtctgaggtggaccccgccgagcctgttcatcttgatgtttccgggacctatgcggtccacggtc +gtcagcttgaggctctatatagagcgctcaatatcccagatgacatcgcggctcgtgcgtcacgtctgacgg +ccactgtagaacttgccgccagcccaggtcgactcgagtgccgtacggtgctcgggaataagacttttcgca +catcaataactgatggcgcccatctcgaggccaacggtcc------------------------cgagcagt +acgtcctgacatttgatgactctcgccaggctatgggggctgggcctcacagccttacgtatgaacttgttc +ctgccggcttgcaagtcaaaatatcttct-------aatggcctggattgtactgccatatttccc---cct +ggtggggcaccaagtgcagcaccaggtgaagtggcggctttctgcagcgccttatacaggtacaacaggttc +acccagcaccattcgttgaccggcgggttgtggctgcaccctgaggggcttcttggcctcttcccccctttc +tccccggggcatctttgggagtctgcaaaccccttttgtggtgagagcacactttacacacgaacatggtct +acatctggtttttccagcgacttctccccacccgaggcggcctatgccgccccagcgcccgacat----ggg +gctaccctcgggcgcctcctcatccgctagtggtat-----------------ctgggcgtt---------- +---------cccaccgccc----tctgagaggt--------------cggcgaccgctccaccacccgtgtt +cccagttagtaagccagctaa---------------------------------------ttcacc------ +------------------------------------------------------------------------ +-aagtctcgc-------------------------------------------------------------- +-------------cacacct----gggtcccccgtccatgagccgcctacaccaccattggctctcaccccg +g---------------------------------------------tcagtaaaccggctagcccgactagc +cttactatatacarg-------------------------------------cctcctgcccgtaagccacc +cacaccacc--------------------------------------accggcccgtactcgccggc----- +-------------------tcctttatacataccctgatggggccaaggtgtatgcaggctctttgtttgag +tctgattgtgactggcttgttaatgcatctaatcctggtcaccgtcctggcggtggtctctgtcatgcattt +taccaacgcttcccggagtcat------tccatccaactgattttgtcatgcgtgaagg---cctcgccgca +tatactctgagcccgcgcccgatcattcacgcagtggcccccgattatagggttgagcagaaccccaagagg +ctggaggcggcatatcgtgagacctgctcccgcctcggcacagccgcgtatcccctactggggtcagggatt +taccaggtccctgtgagtttaagtttcgacgcctgggagcgtaaccaccgcccaggtgatgaactgtacctt +actgagcctgctgccgcc-------------------------------------------------tggtt +cgaggctaataagccaactca--------------------------------------------------- +------------------------------------------gccggctctaacaattactgaggacaccgc +cc------------gcacggctaaccttgcgcttgagattg------------actcygcyactgaggtggg +ycgtgcttgy---rccggctgyactattarcccygggattgtycaytaccagttyaccgccggrgtccctgg +ctcygggaagtctagatcyatacagcarggggatgttgatgtcgtggtygtrccaactcgtgagctccgtaa +cagttggcgacgccgyggctttgctgcyttyacaccycayacagcagctcgtgtyaccgccggccggcgtgt +ggtgatagaygaggcaccttcgctyccrccgcacttgytgytgctccayatgcagcgagcctcatcggtcca +tctycttggygaccccaaycagatycctgccattgaytttgagcacgcyggyttggtcccrgcgatccgycc +ygagttagcycctactagttggtggcatgtyacccaccgctgccccgccgatgtrtgtgagcttatmcgcgg +ggcytacccmaagatccagackaccagccgtgtgytgagatcyttattttggaatgar------cctgcrgt +rggtcagaggctggttttcacgcaggcagccaargcggccaaccccggcgcaatyacygtycatgaggccca +gggygcyacgtttactgagactacyatyatagccacrgccgatgctagaggtctyatycartcttcccgmgc +acatgccatcgttgcrcttactcgccatacagaaaagtgcgtcattctygaygctcctggcytrytgcgtga +ggtcggyatytcygatataattgtyaayaayttt------------------------------ttyctggc +tggtg--gtgargtrggccaccaycgyccttcmaytataccscgtggcaacccrgaycrraaytyagacay- +-----cctmcargcrttyccyccgtcytgccaratyagtgcytaccaccarttggctgaggagctgggccay +cggccggcccckgtrgccgccgtcctgcccccctgccctgagcttgarcaggggttactctacatgccgcag +gagctcacggtgtccgayagygtyctaaytttygaactcacggacatagtycaytgccgtatggctgcyccc +agccarcgtaargcggtyctttctacgctygtyggyaggtacggccgccgaacgaagctgtaygargcrgcc +cattctgatgtycgygagwctttaggraggttcatccctactatcggwccggtccaggccaccacatgygag +ttatatgagctggttgaggccatggtggagaagggccaggayggytccgccgtgcttgagctygacctctgc +aaccgtgatgtytcgcgtattacattyttccagaaggaytgtaayaaattyacaayaggygagaccattgcc +cayggcaaggtgggccagggcatytcggcwtggagtaagacyttctgtgctttattcggtccgtggttccgw +gcyattgagaaggagatcctggctctrcttccacccaayattttytatggcgatgcctatgaggartcagtr +ttttctgcagccatttctggrgccrgctccagtatg---gtytttgaraatgayttytctgagtttgatagc +acccaaaacaatttttctct------------------yggccttgagtgygtyatyatggargartgtggy +atgccccagtggcttatccgactgtaycatttagttagatcrgcctggattytgcaagcccckaaagagtct +ttgaaaggtttytggaagaagcattcyggcgagccyggcactctcctttggaacaccgtctggaacatggcg +atcatagcgcactgctatgaatttcgtgacttgagagtggcggcgtttaaaggggatgactcggtggttctt +tgcagtgactaccgtcagagccgcaatgcggcagccctgatagccggttgtgggttaaaattgaaggttgat +tatcgacccataggattgtatgccggcgttgtagtggctccgggcctcggggcacttcctgatgttgtccgg +tttgcgggtcgattatctgagaagaactggggccccggccccgaacgcgccgaacagctgcgcctagcagtc +tgtgattttcttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +cggggttagccccgggctggtgcataaccttattggcatgttacagaccattgctgatggaaaggcccactt +tactgagaccgtcaagcctgtgctggatcttacaaattctatcatacagaggttagaatgaataacatgtt- +c----------------tgtgcattgcccatggg------------ttcaccatgcgccctagggctgtttt +gctgctgctcctcgtgtttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaatccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccaatccca----------- +------gcgcccctccgctgtcccccgtcgtcgacctacccca---------actggggctgcgccgttaac +tgctgtttcaccagcgcctgatacagccccagtccctgatgttgactctcgtggcgctatccttcgccgcca +gtataatctgtccacctctcctttaacctcatctgtggcctctgggaccaaccttgtcctctatgccgcccc +gcttaatcctcttctgcctctccaggacggcaccaatactcatattatggcgactgaggcgtctaattacgc +tcagtaccgggttgttcgggcaacaatccgctatcgccctttggtgccgaatgccgtcggtggttatgcaat +ttctatctctttctggcctcagacaacaacaacacccacctctgttgacatgaattccatcacttctactga +tgttaggattttggttcagcctggcatagcctctgagctggtcatcccgagtgagcgcctccattatcgtaa +ccaaggttggcgctctgttgagacatcgggtgtggctgaggaggaggcgacttcaggcttggttatgctttg +tattcatggttctcccgttaattcctacaccaacacgccctataccggggcattggggctcctcgactttgc +actcgagcttgaatttagaaatctgacccctgggaacactaatacccgtgtgtcccgttacaccagtacagc +ccggcaccgcttgcgtcgtggtgccgatgggacagctgagctaacaaccactgcagccacacgttttatgaa +ggacttgcatttta---ccgggacaaat---ggtgtcggtgaagtaggccgtggcattgccctaacgctatt +taatcttgctgacacacttctcggtgggctgccgacagaattgatttcgtcggctggaggtcaactgtttta +ctcccgcccggttgtctcagccaatggcgagccaactgttaagttatatacctctgtcgagaatgcacagca +ggataagggtattgctataccacatgatatagacttaggggattcccgtgtggtcatacaagactatgataa +ccaacatgaacaggaccggcctaccccgtcgccggccccatctcgccccttctcagtccttcgagctaacga +tgtcttgtggctctc-----------------------------tctgactgcggccgrgtacgac------ +cagactacttatggctcgtcgactaatcctatgtatgtatcagacactgttacatttgt---taatgtggcg +actggcgcccaggctgttgcccgatcccttgattggtccaaggtcactctggatggccggccactcactacc +at-----ccagcagtattccaagacattttatgtgc-tcccgcttcgtggcaagctttccttctgggaagct +ggtacgactaag--gccggctacccttacaattataacactactgctagtgaccagattttgatcgagaatg +cagccggtcac------cgtgttgccat-atctacttacaccactagtctcgg--------------cgccg +gccctgtgtctgtttc-tgcggtcggcgttcttgctccgcactctgctttagctgtgcttgaagatactatt +gact---------atcctgcccgtg----ctcatacttttgatgatttttgccctgagtgccgcaatc---t +cggcctgcagggctgtgcctttcaatc--------tactattgctgagcttcagcgcct------------- +--------taraatgaaggtaggc------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444062.1/17131/1-7131 |Hepeviridae isolate HEPAC49, partial genome +-------------------------------------------------------------------atgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggttcggccgttcttatcccgtgtccagactgatatcct +tattaacttgatgcaaccccggcagcttgtgttccgacctgaagttctctggaaccatccaatccagcgagt +gatacataatgaactggagcaata---ctgccgagccc-gtgctggccgttgtcttgaggtgggcgcccacc +caagatccatcaacgataaccctaatgttctgcatcggtgctttctccgcccggttggaagagacgtccagc +gctggtactctgcccccacccgtggtccagcggccaactgccgccgttctgcgctgcgtggtttgcctcctg +tcgatcgcacatactgcttcgacgggttttcccgctgcgcctttgcagctgagaccgggatcgctttatact +cgctgcatgatctttggccctcggacgttgcggaggctatggctcgccacggaatgacacgcttgtacgccg +ccctccaccta-ccccctgaggtcttgcttccacctggcacttaccacacaacctcttatcttcttattcat +gacggcaatcgtgccgtcgtgacctatgagggggataccagtgcgggctataaccacgatgtgtctatactt +cgtgcatggatccgcaccactaaaattgttggtgatcatccactggtgatagagagggtccgcgccatcggc +tgccattttgttctactcctcactgcagcccccgagccatccccaatgccctatgtcccgtaccctcgctca +acagaggtttatgtcagatctatatttggccctggt---------gggtcgccctctcttttcccctcagcc +t----------gctctaccaaatcta-cattccatgccgtcccggttcatatatgggaccggcttatgcttt +ttggtgccaccttagatgatcaggccttttgctgctcgcggctcatgacctatctccgcgggatcagctaca +aagtgaccgttggcgcacttgtcgccaacgagggctggaatgcctctgaggatgcgcttaccgctgtgatta +ccgcagcgtacttgactatctgtcatcagcgctacctacgaacacaggccatttccaaaggcatgcgtcggc +tagaggttgagcacgcccaaaagtttattacaaggttatacagctggctgtttgagaagtc---------ag +gccgtgactacatccccggtcgccaactcgagttttatgcacagtgccgccgttggctctcagctggcttcc +atctggaccctagagtccttgtctttgacgaggcggtcccctgc---cgttgccggagcttcttaaagaa-- +----ggttgccggaaaattttgttgttttatgaaatggctggggcaaga------gtgcacctgttttttgg +----------------agccagcggaaggcctggttggtgactgtggc--------catgataatgaggcct +atgaagggtctgaggtggaccccgccgagcctgctcaccttgatgtttctgggacctatgcagtccatggcc +gtcagcttgaggctctatatagagcgcttaatatcccagatgatattgccgctcgtgcgtcgcgcctgacgg +ctactgtagaacttgccgccagcccaggccgacttgagtgccgcacggtacttgggaataagacctttcgga +catcaataactgatggtgctcacctcgaagtcaatggccc------------------------cgagcagt +acgtcttgacatttgatgattctcgccaggcaatgggggccgggcctcatagcctcacgtatgaactcgttc +ctgccggtctgcaggttaagatatcttct-------aatggcttggattgtaccgctatattcccc---cct +ggtggagcgccgagcgctacaccaggtgaagtagcggctttttgcagcgcactgtacaggtacaacaggttc +acccagcgccattcgctgacaggtgggctgtggctgcaccctgaggggctccttggcctgttcccccccttt +tccccggggcatctctgggagtctgcaaaccccttttgcggtgagagcacactttatacgcgaacatggtct +acatctggtttctctagcgacttctccccgcctgaggcggcttatgccgccccagtctctgacgt----agg +gctaccctcgggtgccccctcgtctgctagtgatgt-----------------ctgggtgtt---------- +---------tccaccgccc----tctgaggggt--------------cggcgattattctgccacccgagac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ccagtaagccagctagcccacctagt +cttactacatctagg-------------------------------------ccccccgcctgtaagccatc +cacaccacc--------------------------------------actggctcgcactcgccggc----- +-------------------tcctttatacataccctgatggggccaaggtgtatgtaggctctttgtttgag +tcagattgcgactggctggttaatgcatctaaccctggccaccgccctggtggtgggctttgccatgcattt +tatcagcgtttcccagagtcgt------tccatccgactgattttgttatgcgtgaggg---tcttgccgca +tacaccttgagcccgcgcccgattattcatgctgtggcccccgactatagggttgagcagaaccccaagagg +ttggaggcggcatatcgcgagacctgctcccgcctcggcacagctgcctacccgttactggggtcggggatc +taccaggtgcctgtgggtttaagtttcgacgcctgggagcgtaaccaccgcccaggcgatgaactttacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacattgc +cc------------gcacggccaaccttgcgcttgagattg------------actccgctactgaggtggg +ccgtgcttgc---gccggctgtactattagccccgggattgtccattaccagttcaccgccggggttcccgg +ctccgggaagtctaggtctatacagcagggcgatgttgatgttgtggtcgtgccaactcgtgagcttcgcaa +cagctggcgacgccgtggctttgctgcttttacaccccacacagcagcccgtgtcactgccggccggcgtgt +ggtgatagatgaggcaccctcgcttccaccgcacttgctattgctccatatgcggcgagcctcatcggtcca +tctccttggtgaccctaatcagatccctgctattgactttgagcatgccggtttagtcccggcgatccgccc +agagctcgcccctactagttggtggcatgttacccatcgctgccccgccgatgtgtgcgagctcatacgcgg +ggcttatccgaagatccaaacgactagccgtgtgttgcggtccttattttggaatgaa------cctgcggt +gggtcagaggctggtttttacgcaagcagccaaggcagccaatcccggtgcaattaccgttcatgaggccca +gggcgccacgtttacggagactaccatcatagccacggccgatgctagaggtcttattcagtcttctcgggc +acatgccattgttgcactcactcgccacacagaaaaatgcgtcatttttgacgcccccggcctactgcgtga +ggtcggcatttctgatataattgttaacaatttt------------------------------ttcctggc +tggcg--gtgaagtgggccatcatcgcccttctactataccccgcggcaatccagaccagaacttggacac- +-----cctacgagcgttccctccgtcctgccaaattagtgcctatcatcagctggctgaggagctgggccac +cggccggtcccagtggccgctgtcctgcccccctgccctgagctcgagcaggggctgctctacatgccgcag +gaacttacggtgtctgacagcgtcctaattttcgaactcacggacatagttcattgccgtatggctgccccc +agtcaacgtaaggcggtcctctcgacgctcgttggtaggtacggccgccgaacaaagctgtatgaagcggcc +cattctgatgttcgcgagtctttagggaagtttatccctactatcggaccggtccaggccaccacgtgcgag +ctatatgagctggttgaggccatggtggagaagggtcaggacggctccgccgtgcttgagcttgacctctgc +agccgtgatgtctcgcgtatcacttttttccagaaggattgtaataaatttacaacaggtgagaccattgcc +cacggcaaggtgggccagggcatctcggcatggagcaagaccttctgcgccctattcggcccgtggttccgt +gccattgagaaggagattctcgccctgcttccacccaacattttctatggcgatgcctatgatgagtcagtg +ttttctgcagccatttctggggctggctccagtatg---gttttcgagaacgatttttctgagtttgatagt +acccaaaataatttttctct------------------tggccttgagtgtgttatcatggaggagtgtggc +atgccccaatggcttatccgattatatcacttagttaggtcagcctggactctacaagccccgaaagagtct +ttgaaaggtttctggaagaagcactctggcgagcctggcactctcctttggaacaccgtctggaatatggcg +atcatagcacattgctatgagttccgtgacctgagagtggcagcgtttaagggggacgattcagtggttctt +tgcagtgattatcgccagagccgcaatgcggccaccctgatagccggttgcgggttgaaattgaaggttgat +tatcggcccataggtttgtatgccggcgttgtagtggctccgggcctcggagcacttcctgatgttgtccgg +ttcgccggtcgattatctgagaagaactggggtccgggccccgaacgcgccgaacagttgcgtatagcagtt +tgtgatttccttcgagggttgacgaacgttgcgcaggtttgtgttgatgttgtgtcccgcg-------ttta +tggggtcagccccgggctggtgcataaccttattggcatgctacagactattgccgatggaaaggcccactt +tactgagactgttaagcccgtgctggatcttacaaattctattatacagaggttggaatgaataacatgtt- +c----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gttgttgctcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaacccggggctggagctcgctctc +gacagccggcccg---------------ccccctcggttcctcttggcgcgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtctcaccagcgcctgatacggtcccagtccctgatgttgactctcgtggcgctattttacgccgcca +gtataatttgtccacttctcctttaacttcatctgtcgcctctggaactaatcttgttttgtatgccgcccc +gctcaatcctctcctgcccctccaagacggcactaatactcacatcatggcgactgaggcgtctaattatgc +tcagtaccgggttgtccgggctacaatccgataccgccctctggtgccgaatgccgtcggtggttatgcaat +ttctatttccttctggcctcagaccacaactacacccacctcagttgatatgaattccattacctctactga +tgtcaggattttagtccagcctggcatagcctctgagctggtcatcccgagtgagcgccttcactatcgcaa +ccaaggctggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggcttggtcatgctttg +tattcatggctcccctgtcaattcctataccaacacgccctataccggggcattgggactcctcgactttgc +actcgagcttgaatttagaaatttgacccccgggaacactaacacccgtgtatcccgttacactagcacagc +ccgacaccgcttacgccgtggagccgacgggacagccgagcttacaaccaccgcagccacacgttttatgaa +ggacttgcacttca---ccgggacaaat---ggtgttggtgaggtaggccgtggtatagccctaacactatt +taatcttgctgacacacttctcggcgggctgccgacagaacttatttcgtcggctggaggtcaattatttta +ctcccgcccggtcgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcgcagca +ggacaagggcattgctataccacacgatatcgacctaggggattcccgtgtggttatacaagactatgacaa +ccaacatgaacaagaccggcctaccccgtcgccggccccgtcccgccccttttcagtccttcgagccaatga +tgtcctgtggctctc-----------------------------tctgactgcggctgagtatgac------ +cagactacttacggctcgtcgaccaaccccatgtatgtttcggatactgtcacatttgt---taatgtggcg +acaggtgcccaggctgttgcccgttcccttgattggtccaaggtcactttggacggccggccactcactacc +at-----tcagcagtactccaagacattttatgtgc-tgccgcttcgtggtaagctttccttttgggaagct +ggtacgactaag--gctggctacccttataattacaatactactgctagtgaccagattttgattgagaatg +cagccggtcat------cgtgttgccat-atctacttatacaactagccttgg--------------tgccg +gccctgtgtctgtctc-tgcggtcggcgttcttgctccgcactctgctttagctgtgcttgaagatactatt +gatt---------accctgcccgtg----cccatacttttgatgacttctgccctgagtgccgtaatc---t +cggcctgcagggctgcgcttttcagtc--------tactattgctgagcttcagcgtct------------- +--------taraatgaaggtaggcaaaacccgggag------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444066.1/17278/1-7278 |Hepeviridae isolate HEPAC72, complete genome +--------------------------------------------------------------ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatcccgtattcagactgatatcct +tattaacctgatgcaaccccggcagcttgttttccggcctgaagttctctggaatcacccgatccagcgggt +tatacataatgagctggagcaata---ctgccgagccc-gcgctggccgctgtcttgaggtgggcgctcacc +caagatccatcaatgacaaccccaatgttctgcaccggtgctttctccgcccggtcggtagagacgtccagc +gctggtattctgcccccactcgcggtccagcggctaactgccgccgctctgcgctacgtggtttgccccctg +tcgatcgtacatattgcttcgacgggttctcccgttgcgcctttgccgctgagaccgggattgctttatatt +cactgcatgatctttggccctcggacgttgcggaggccatggctcgccacgggatgacgcgcttgtatgctg +ccctccaccta-ccccctgaggttctgttaccacctggcacttaccacacaacttcctatcttttgattcac +gacggcaatcgtgccgtcgtgacttacgagggtgatactagtgcgggctataatcacgatgtgtctatactt +cgtgcatggatccgcaccactaaaatagttggtgatcacccactggtaatagagagggtccgcgccatcggc +tgccattttgtcctactccttactgcagcccccgagccatccccaatgccttatgttccgtaccctcgctca +acagaggtgtatgtcagatccatatttggtcctggt---------ggatcaccttctctctttccgtcagcc +t----------gctctactaagtcta-cattccacgccgtcccagtccatatctgggaccggctaatgctct +ttggtgccaccttagatgaccaggccttttgctgctcgcggcttatgacctatctccgcgggattagctata +aagtgaccgttggcgcacttgtcgccaacgaaggctggaacgcctcagaggacgcgctcaccgctgtgatta +ctgcagcgtatttgaccatctgccatcagcgctacttacggacacaggccatttccaaaggcatgcgccggt +tagaggttgagcatgcccaaaagtttatcacaaggttatatagttggctgtttgaaaagtc---------ag +gccgtgactacatccccggtcgccagctccagttttatgcgcagtgccgccgttggctctcggccggctttc +atctggaccctagagttctcgtttttgacgaggcggtcccttgc---cgctgccggagcttcttaaagaa-- +----ggttgccggaaaattttgttgttttatgaaatggttggggcagga------gtgcacctgctttttgg +----------------agccagcggaaggcctggttggtgactgtggc--------catgataacgaggcct +atgaggggtctgaggtggaccccgccgagcctgcccatcttgatgtttccgggacctatgcggtccacggcc +gccagcttgaggctctatatagagcgcttaatatcccggatgacatcgcggctcgtgcgtcacgtctgacgg +ctactgtagaacttgccgccagcccaggccgactcgagtgccgtacagtgcttgggaataagacttttcgta +catcaataactgatggcgctcatcttgaggccaatggtcc------------------------cgagcagt +acgtcttgacatttgatgactctcgccaggctatgggggctgggccacacagcctcacgtatgaacttgtcc +ctgccggcttgcaagtcagaatatcttct-------aatggcctggattgtactgccatattcccc---cct +ggtggggcaccaagtgcagcaccaggtgaagtggcggctttctgtagcgccttatacaggtacaataggttc +acccagcgccattcgctgaccggcgggctgtggttgcaccctgaggggcttcttggcctgttcccccctttc +tccccggggcacctttgggagtctgcaaaccccttttgtggtgagagcacactttacacacgaacctggtct +acatctggtttttccagcgacttctccccacccgaggcggcctatgccgccccagcacccgacat----ggg +gctaccctcgggcgcttcctcgtccgctagtgacat-----------------ctgggtgtt---------- +---------tccaccgccc----tctgagaggt--------------cggcgatcgctccaccacccgtaac +cccagttagtaagccagctaa---------------------------------------cccgtc------ +------------------------------------------------------------------------ +-aagtcttgc-------------------------------------------------------------- +-------------tacacct----aggccccccgttcgtgagccacctacaccaccgccggccctcgccccg +g---------------------------------------------tcagtaaaccggctagcccgcctagc +cctactatatatagg-------------------------------------cctcccgcccgtaagccacc +tacgccacc--------------------------------------accggctcgcactcgccggc----- +-------------------tcctttatacataccctgatggggccaaggtgtatgcaggctctttgtttgag +tcagattgtgattggcttgttaatgcatctaaccctggccaccgtcctggcggcggtctttgccatgcattt +taccaacgcttcccggagtcat------tccatccaactgattttgtcatgcgcgaagg---tctcgccgca +tatactctcagcccgcgtccgatcattcacgcagtggcccccgactatagggttgagcagaaccccaagagg +ctggaggcggcatatcgtgagacctgctcccgcctcggcacagccgcatatcctctactggggtcagggatt +taccaggtccctgtgagtttaagtttcgacgcctgggagcgtaaccaccgcccaggtgatgaactgtacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacaccgc +cc------------gcacagctaaccttgcgcttgagattg------------actccgccactgaggtggg +ccgtgcttgt---accggctgtactattaaccccgggattgttcattaccagttcaccgccggggtccccgg +ctctgggaagtctagatctatacagcagggggatgttgatgtcgtggtcgtgccaactcgtgagcttcgtaa +cagttggcgacgccgtggctttgctgctttcacaccccacacagcagctcgtgttactgccggtcggcgtgt +ggtgatagatgaggcaccttcgcttccaccgcacttgctgctgctccatatgcagcgagcctcatcggtcca +tctccttggtgaccccaaccagattcctgccattgactttgagcacgccggtttggtcccagcgattcgacc +tgagttagctcctactagttggtggcatgtcacccaccgctgccccgccgatgtatgtgagctcatacgcgg +ggcctaccccaagatccagacgaccagccgtgtgctgagatctttattttggaacgag------cctgcggt +gggtcagaggctggttttcacgcaggcagccaaagcggccaaccccggtgcaatcaccgtccatgaggccca +gggtgccacgtttactgagactactatcatagccacggccgatgctagaggtcttatccaatcttcccgcgc +acacgccatcgttgcgcttacccgccatacagaaaagtgcgtcatcctcgacgctcctggcctgctgcgtga +ggtcggcatctctgatataattgttaataacttt------------------------------ttcctggc +cggtg--gtgaagtgggccaccatcgcccttctactataccgcgcggcaacccagaccgaaacttagacac- +-----cctacaggcgttccctccgtcctgccaaattagtgcctaccaccaattggctgaagagctgggccac +cggccggcccctgtggccgccgtcctgcccccttgccctgagcttgagcaggggttactctacatgccgcag +gagcttacggtgtccgatagcgtcctaatctttgaactcacggacatagttcactgccgtatggccgccccc +agtcagcgtaaggcggtcctttctacgctcgtcggtaggtacggccgccgaacgaagctgtatgaagcggcc +cattctgatgttcgtgagtctttaggaaggttcatccctactatcggcccggtccaggccaccacatgcgag +ttatatgagctggttgaggccatggtggagaagggccaggatggctccgccgtgcttgagctcgacctctgc +agccgtgatgtttcgcgtattacattcttccagaaggactgtaataaatttacaacaggtgagaccattgcc +cacggcaaggtgggccagggcatttcggcttggagtaagactttctgtgctttattcggtccgtggttccgt +gctattgagaaggagatcctggctctgctcccacccaacattttttatggcgatgcctatgaggagtcagtg +ttttctgcagccatttctggggctggctccagtatg---gtttttgagaatgatttttctgagtttgatagc +acccaaaacaatttttctct------------------tggccttgagtgtgtcattatggaggagtgtggc +atgccccagtggcttattcgactgtatcatttagttagatcggcctggactttgcaagcccctaaagagtct +ttgaaaggtttctggaagaagcattccggcgagcccggcaccctcctttggaacactgtttggaatatggcg +atcatagcacactgctatgagttccgcgacctgagggtggcagcgtttaagggggatgattcagtggttctt +tgcagtgattaccgccagagccgcaatgcggctacacttatagccggctgtgggttgaaattgaaggttgat +taccggcctataggtttgtatgccggcgttgtagtggctccgggcctgggggcactccctgatgttgtccgg +ttcgccggtcgattatctgagaagaactggggcccgggccccgagcgtgccgaacagctgcgcctagcagtc +tgtgacttccttcgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacagactattgctgatgggaaggcccactt +tactgagactatcaaacctgtgctggatcttacaaattctattatacagaggttggaatgaataacatgtt- +c----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gttgttgctcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcttaccacaatccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtttcaccagcgcctgacacggccccagttcctgatgttgactctcgtggtgctatcttgcgccgtca +gtataatttgtccacctctccattaacttcatctgttgcttctggaactaatcttgtcttgtatgctgcccc +gcttaaccctcttctgcctctccaagacggtaccaatactcacatcatggcgactgaggcgtctaattacgc +ccagtatcgggttgttcgggctacaatccgttatcgccctttggtgccgaatgctgtcggtggttatgcaat +ttcaatttccttctggcctcagactacaactacacccacctctgttgatatgaattccattacttctactga +tgttaggattttagtccagcctggcatagcctctgagcttgtcatcccgagtgagcgccttcactaccgtaa +tcaaggctggcgttctgttgagacatcgggtgtggctgaggaggaggcgacatcaggcctggtcatgctttg +tattcatggctcccctgttaattcctataccaatacaccctatactggggcattagggctccttgactttgc +actcgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgatacactagtacagc +ccggcaccgtttgcgccgtggtgccgatgggacagccgagcttacaactaccgcagccacacgttttatgaa +ggacttgcatttta---ctgggacaaat---ggtgttggtgaggtaggccgtggtatagccctaacgctatt +taaccttgctgatacacttctcggcgggttgccgacagaattaatttcgtcggctggaggtcaactgttcta +ctcccgcccagttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggcattgctataccacatgatatagacttaggggattcccgcgtggttatacaagactatgacaa +ccaacatgagcaggaccggcctaccccgtcgccggccccgtcccgccccttctcggtccttcgagccaatga +tgttctgtggctctc-----------------------------tctgactgcggctgaatacgac------ +cagaccacctatggctcgtctaccaaccccatgtatgtttcagatacagttacatttgt---taatgtggcg +acgggcgcccaggccgttgcccgatcccttgattggtccaaggttactttggatggtcggccacttactacc +at-----acagcagtactccaagacattttatgtac-tgccacttcgtggcaagctttccttttgggaagct +ggcacgactaaa--gctggctacccttacaattataacactactgctagtgaccagattctgatcgagaatt +cagccggccac------cgtgttgccat-atctacttataccactagtcttgg--------------tgccg +gccctgtatctgtttc-tgcggtcggcgttcttgccccgcgttctgctttagctgtgcttgaagatactatt +gact---------atcctgctcgcg----cccatactttcgatgatttctgccctgagtgccgcaatc---t +tggcttgcagggctgtgctttccagtc--------tactgttgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt-----c-ccct-ttt------gt +gccc-cct--------tc-taaa-ct-tc----gc-cc-tgt----------------attc-t-------t +ttt--------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444067.1/17153/1-7153 |Hepeviridae isolate HEPAC82, complete genome +---------------------------------------------------------------gtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggctaactccgccttggcgaatgctgtggtggttcggccgtttttatcccgtgttcaaactgacatcct +tatcaacttgatgcaaccccggcagcttgtttttcgacctgaagttctctggaaccatccgatccagcgagt +tatacataacgagctggagcagta---ctgccgagctc-gtgctggtcgctgccttgaggtgggcgcccacc +cacgatccattaatgataaccccaatgttttgcaccggtgctttctccgcccggttggaagagatgtccagc +gctggtactctgcccctactcgtggtccagcggccaactgccgccgttccgcgttacgtggcctgccccctg +tcgatcgcacatactgtttcgacgggttttcccgctgcacctttgctgctgagaccggaatcgctttatact +cactgcatgatctatggccatcggacgttgcagaggctatggcccgccatggaatgacgcgtttgtacgctg +cccttcaccta-ccccctgaggtcctgttaccacctggcacttaccacacaacctcttacctcctgatacac +gacggcaatcgtgccgtcgtgacttatgagggggataccagtgcgggctataaccacgatgtgtctatactt +cgtgcatggatccgcaccactaaaatagttggtgatcacccactggtgatagagagggtccgcgccatcggc +tgccattttgtcctacttcttactgcagcccccgagccatccccaatgccttatgtcccgtaccctcgctca +acagaggtgtatgttagatctatatttggccctggc---------gggtcgccttctcttttcccgtcagcc +t----------gctccaccaaatcta-cattccatgctgttccggtccacatttgggaccggcttatgcttt +ttggtgccacattggacgatcaggccttctgttgctcgcggcttatgacctatctccgcgggattagctata +aagtgaccgtcggtgcacttgtcgctaacgagggctggaatgcctcggaggatgcgctcaccgctgtgatta +ccgcagcgtacttgactatctgtcatcagcgctacctacgaacacaggccatctccaaaggcatgcgtcggc +tagaggtggagcatgcccaaaagtttatcacaaggttatatagctggctgtttgaaaagtc---------ag +gccgtgactacatccccggtcgtcagctcgagttttatgcacagtgccgccggtggctctcagctggctttc +atttggaccccagagttcttgtttttgacgaggcggtcccctgc---cgctgccggagcttcttaaagaa-- +----ggttgctgggaaattttgttgttttatgaaatggctggggcagga------gtgcacctgctttctgg +----------------agccggcggagggcctggttggtgactatggc--------catgacaatgaggcct +atgaagggtctgaggtggaccccgccgagcctgctcaccttgatgtttctgggacctatgcggtctatggcc +gtcagcttgaggctctatatagagcgctcaatatcccagatgacattgcggctcgcgcgtcacgcctgacgg +ctactgtagaacttgccgccagcccaggccgactcgagtgccgtacggtgcttggaaataagacctttcgta +catcaataactgatggtgcccatctcgaagccaacggccc------------------------cgagcagt +acgtcttgacatttgatgattctcgccaggcaatgggggctgggccccacagcctcacgtatgaacttgttc +ctgccggtctgcaagtcaaaatatcttct-------aatggtttggattgtaccgctatattcccc---cct +ggtggggcgccaagcgctgcaccaggtgaagtggcggctttttgtagcgccctatacaggtacaataggttt +acccagcgtcattcgctgaccggtgggctgtggctgcaccctgaggggcttcttggcctgttcccccctttc +accccggggcacctctgggagtccgcaaacccattttgcggtgagagtacactttacacacgaacttggtca +acatcaggtttttctagcgatttttccccgcccgaggcggctaatgccgccccagcccctgctat----agg +gccactctcgggtgtcccctcgtccgctagcgatgt-----------------ctgggtgtt---------- +---------tccaccgccc----tctgaggggt--------------cggcgatcgttccgccacccgaaac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtgagccagttgacccgcctagc +cttcctacacctagg-------------------------------------ccccccgctcgtaagccacc +cacaccacc--------------------------------------accggcccgcacccgccggc----- +-------------------tcctctatacatatcctgatggggccaaggtgtatgcaggctctttgtttgag +tcggactgtgactggctggttaatgcatctaaccccggccaccgccctggcggtggtctttgccatgcattt +tatcagcgcttcccggaatcat------tccatccggctgattttgtcatgcgtgaagg---tctctccgca +tacactttgagcccgcgtccgatcattcatgctgtggcccccgactacagggttgagcagaaccccaagagg +ttagaggcggcttaccgtgagacctgttcccgcctcggcacagctgcctacccgttattggggtcgggaatt +taccaggtgcctgtgggcttaagtttcgacgcttgggaacgtaaccaccgcccaggcgatgaactttacctc +actgagccggctgctacc-------------------------------------------------tggtt +tgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccggccctaacaattactgaggacactgc +cc------------gcacagccaacctcgcacttgagattg------------attctgctactgaggtggg +tcgtgcttgc---gccggctgtattattaatcccgggattgtccattaccagtttactgccggggtccctgg +ctccgggaagtctaggtctatacagcagggggatgtygatgttgtggttgtgccaactcgtgagcttcgtaa +cagttggcgacgccgcggctttgcagcttttacaccccacacagctgctcgggttactgccggtcggcgtgt +ggtgatagatgaggcaccttcgcttccaccgcatttgctgttgctccatatgcagcgagcctcatcggtcca +tcttcttggtgatcccaatcagattcctgctatagattttgagcacgccggtttagtcccagcgattcgccc +tgagcttgcccctactagttggtggcacgtcactcaccgctgccccgccgatgtgtgcgagctcatacgcgg +tgcttacccaaagattcagacgaccagtcgtgtgttacgatctttattttggaatgaa------cctgcggt +gggtcagaagctggttttcacgcaggcagccaaggcggccaacccaggtgcaattaccgtccacgaggctca +gggtgctacgttcacggagactactatcatagctacggccgatgctagaggtcttattcaatcttcccgagc +acatgccattgttgcacttactcgccatacagaaaaatgcgtcattcttgacgctcccggcctactgcgtga +ggtcggcatatctgatataattgttaataacttc------------------------------ttcctagc +tggtg--gcgaagttggtcaccatcgcccttctaccataccccgcggtaacccagatcagaacttagatac- +-----cctccgagcgttccctccgtcctgccaaattagtgcctaccaccagttggctgaggagctcggccat +cggccggcaccagtggccgctgtcctgcccccttgccctgagcttgagcaggggctactctacatgccgcag +gagcttactgtgtccgatagtgtcctaatttttgaactcacggacatagttcattgccgtatggctgccccc +agtcaacgcaaggcggtcctttcgacgctcgtcggtaggtacggccgccgaacgaagctgtacgaagcggct +cattctgatgttcgtgagtctttaggtaggttcatccccactatcggaccagtccaggccaccacgtgcgag +ctatatgagctggttgaggctatggtggagaagggccaggacggctccgccgtgctcgagcttgatctctgt +agccgtgatgtctcgcgtattacattcttccagaaggactgtaataaatttacaacaggcgagaccatagcc +cacggcaaggtgggccagggcatttcggcttggagtaagaccttctgtgctttattcggcccgtggttccgt +gccattgagaaagagattctggccctgctcccacccaacatcttctatggcgatgcctatgaggagtcggtg +ttctccgcagccatctctggggctggctccagtatg---gttttcgagaacgatttttcagagtttgatagt +acccaaaacaatttttctct------------------tggccttgagtgcgttattatggaggagtgtggc +atgccccagtggctcatccgactgtaccatttagttaggtcagcctggaccttgcaggccccgaaagagtct +ttgaaaggtttttggaaaaagcattctggcgagcccggcactctcctttggaatactgtttggaacatggcg +atcatagcacactgctatgaattccgtgatttgagagtggcagcgtttaaaggggatgactcagtggtcctc +tgtagtgattaccgccagagccgcaatgcggccaccctgatagctggttgcgggttgaaattgaaggttgat +taccggcctataggtttgtacgccggcgttgtagtggctccgggcctcggggcacttcctgatgttgtccgg +ttcgccggccgattatctgagaagaactggggtccgggcctcgagcgcgccgaacagttgcgcctagcagtt +tgtgatttccttcgaaagttgacgaacgttgcgcaggtttgtgttgatgttgtttcccgtg-------ttta +tggggttagtcccgggctggtgcataaccttattggcatgctacagactattgctgatggaaaggcccattt +cactgagactgtcaagcctgtactggatcttacaaactctatcatacagaggttggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcagtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaacccggggttggagctcgccctc +ggcagccggcccg---------------ccccctcggttcctcttggcgtgaccagtccca----------- +------gcgccccccagctgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtttcgccagcacccgatacggccgcagtccctgatgttgattcccgtggcgccattctgcgtcgcca +gtataatttgtctacctctcccttaacctcatctgttgcttctgggactaatcttgtcctgtatgccgcccc +gcttaaccctctcctgcctcttcaagacggcactaatactcatatcatggcgactgaggcgtctaattatgc +ccagtatcgggttgtccgggctacaatccgctatcgccctttggtgccgaatgctgtcggtggttatgcaat +ttctatttctttctggcctcagaccacaaccacacccacctctgttgatatgaattccattacttctactga +tgttaggattttagtccagcccggcatagcctccgagctggtcatcccgagtgagcgcctccactatcgtaa +tcaaggttggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggcttggttatgctttg +catccatggctctcccgttaattcctataccaacacgccctatactggggcattggggctcctcgatttcgc +actcgagcttgaatttagaaatctgacccctgggaacactaacacccgtgtgtcccgttacaccagcacagc +ccgacaccgcttgcgtcgtggtgctgacgggacagccgagcttacaaccaccgcagccacacgttttatgaa +ggacttgcatttca---ctgggacgaat---ggtgttggcgaggtaggccgtggtatagccctaacgctatt +taatcttgctgacacacttctcggcgggctgccgacagaattgatttcgtcggctggaggtcaactgttcta +ctcccgcccggttgtctcggccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggcattgctataccacacgatatagacttaggggactctcgtgtggttatacaagactatgacaa +ccagcatgaacaggaccggcctaccccgtcgccggccccgtcccgccccttttcagtcctccgggccaatga +cgtcctgtggctttc-----------------------------tttgactgcggctgaatatgac------ +cagactacatatggytcgtcgaccaaccccatgtatgtctcggatactgttacatttgt---taacgtagct +acaggtgcccaggctgttgcccgttcccttgattggtccaaggtcactttggacggccggccactcaccacc +at-----ccagcagtactctaagacattttatgtgc-tgccgctccgtggtaagctttccttttgggaagct +ggtacgactaag--gctggctatccttataactataatactactgctagtgaccagattttgattgagaatg +cagccggccac------cgtgttgccat-atctacttatactaccagtcttgg--------------tgccg +gccctgtgtctgtttc-tgcggtcggcgttctcgccccgcattctgctttagctgtgcttgaagacactatt +gact---------accctgcccgtg----ctcatacctttgatgatttctgccctgagtgccgtaatc---t +cggtttgcagggctgtgcttttcagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-ctc--t---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444070.1/17259/1-7259 |Hepeviridae isolate HEPAC146, complete genome +---------------------actctat---cacac-acagat-------------g-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggtccggccgtttttatcccgtgttcaaactgatatcct +tattaacttgatgcaacctcgacagcttgttttccggcccgaagtcctctggaatcatccgatccagcgagt +tatacataatgagctggagcaata---ctgccgagccc-gcgctggccgttgtcttgaagtgggtgcccacc +caagatctattaatgataaccccaatgttctgcaccggtgctttctccgcccggtcggaagagacgtccagc +gctggtattccgcccccactcgtggtccagcggctaattgccgccgttcagcgctacgcggtttgccccctg +tcgaccgcacatattgcttcgacgggttctcccgctgcgccttcgccgctgagaccgggatcgctttgtact +cactgcatgacctttggccttcagatgttgcagaggctatggctcgccatgggatgacgcgcttgtatgctg +ccctccaccta-ccccctgaagttctgttaccgcctggaacttatcacacaacctcctatcttctgattcac +gacggcaatcgtgctgtcgtgacttatgaaggggatactagtgcgggttataaccacgatgtgtctatactt +cgtgcatggattcgcaccaccaaaatagttggtgatcacccgctggtgatagagagggtccgcgccattggc +tgccattttgtcttactccttactgcagcccccgagccgtccccaatgccttatgtcccgtaccctcgttca +acagaggtgtatgttagatccatatttggccctggc---------gggtcgccttctcttttcccatcagcc +t----------gctctaccaagtcta-cattccatgccgtcccggtccatatctgggaccggcttatgcttt +ttggtgctaccttagatgaccaagccttttgctgctcgcggcttatgacctacctccgcggaattagttata +aagtgaccgttggcgcacttgtcgcaaacgaaggctggaatgcctcggaggatgcgttaaccgctgtgatta +ctgcagcgtatttgactatttgccatcagcgctacctacgaacacaggccatttctaaaggcatgcgtcggc +tagaggttgagcacgcccaaaaatttatcacaaggctatatagctggttgtttgaaaaatc---------ag +gccgtgattacatccccggtcgccagctccaattttatgcgcaatgccgccgttggctctcggctggcttcc +atctggaccctagagttctcgtctttgatgaggcggtcccttgc---cgatgccggagcttcctaaagaa-- +----ggtcgccggaaaattttgctgctttatgaagtggctggggcagga------gtgcacttgttttttgg +----------------agccagcggaaggcctggttggtgactgtggc--------catgataacgaggcct +atgaggggtctgaggtggaccccgccgagcctgcccaccttgacgtctctgggacttatgcggtccacggcc +gtcagcttgaggccctatatagagcgcttaatatcccagatgacattgcggcccgcgcgtcacgtctaacgg +ctaccgtggagcttgccgccagtccaggcagacttgaatgccgcacggtgcttgggaataagatcttccgta +catcaataactgatggtgcctatctcgaggccaacggtcc------------------------tgagcagt +acgtcttgacatttgatgattctcgccaagcgatgggggccgggcctcacagcctcacgtatgaacttgtcc +ctgctggtctgcaggttaaaatatcttct-------aatggcctggattgtaccgccatattccct---cct +ggtggggcgcctagcgctgcaccaggcgaagtggcggctttctgtagcgccctatacaggtacaataggttc +actcagcgccattcgctgactggcgggctgtggctgcaccccgaggggctccttggcctgttcccccctttt +tccccggggcatctttgggactctgcaaaccccttttgcggtgagagcacactttatacacgaacttggtcc +acatctggtttttctagcgacttctccccacccgaggcggcttatgccgccccagtccctggcat----ggg +gttaacctcgggtgccccctcctccgctagtgatat-----------------ctgggtgtt---------- +---------tccaccgccc----tctgaggggt--------------cggcgatcattccgctacccataac +cccggtcggtaagccaactaa---------------------------------------tccgcc------ +------------------------------------------------------------------------ +-tggtcatac-------------------------------------------------------------- +-------------tacacct----aggccacccgtccgtgagccgtccacaccaccaccggccccaacccca +g---------------------------------------------ctagtaagtcagctaatccgcctggc +cttactgcacctagg-------------------------------------ccccccgtccgtgagccgcc +cacaccgcc--------------------------------------atcggttcgcactcgccggc----- +-------------------ttctttatacatatcctgatggggccaaagtgtatgcaggctctctgtttgag +tcagattgttactggctggttaatgcatctaaccccggccaccgtcctggtggtggtctctgccatgcattt +taccagcgcttcccagagtcgt------tttatccgaccgattttgttatgcgcgaggg---cctcgccgca +tatactttgagcccgcgtccgattattcatgctgtggcccctgactacagggttgagcagaatcccaagagg +ctggaggcggcatatcgtgagacctgctcccgcctcggcacagctgcctacccactactggggtcagggatt +tatcaggtccctgtaggcctaagctttgacgcctgggagcgtaaccaccgcccgggcgatgaactttatctt +actgagccagccgccgcc-------------------------------------------------tggtt +cgaggctaataagcctaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacaccgc +cc------------gcacagccaaccttgcgcttgagatcg------------actccgctactgaggttgg +tcgtgcctgt---gctggctgcactattaaccctgggattgtccactaccagttcaccgctggggttcctgg +ctccgggaagtctaggtctatacagcaaggggatgttgatgtcgtggttgtgccaactcgcgagcttcgcaa +cagctggcggcgccgcggctttgctgcttttacacctcacacagcagctcgtgtcactgccggccggcgtgt +ggtgatagatgaagcaccctcgcttccaccgcacctgctgttgctccatatgcagcgagcctcatcagtcca +tcttcttggcgatcccaatcagatcccagccattgactttgagcacgccggcttggtcccggcgatccgccc +tgagctagcccctactagttggtggcatgtcacccaccgttgccccgccgatgtatgtgagcttatacgcgg +ggcctacccaaagattcagacgaccagccgtgtattgagatctctattctggaatgag------cctgcgat +aggccagaagctggtttttacgcaggcagccaaggccgccaatcccggcgcaattaccgttcacgaggccca +gggggccacgtttactgagactaccatcatagccacggccgacgctagaggtcttattcaatcttctcgcgc +acatgccatcgtcgcacttacccgccatacagagaagtgcgttattctcgacgctcctggcctgttgcgcga +ggttggcatttctgatataattgtaaataacttt------------------------------ttcctggc +cggtg--gtgaagtaggccaccatcgcccttctaccatcccccgcggcaacccggaccggaacctagacac- +-----cctccaagcgttccctccgtcctgccaaattagcgcttaccaccagttggctgaggagctgggccac +cggccggccccagtggccgccgtcctgcccccctgccctgagcttgagcaggggttactctacatgccgcag +gagcttacggtgtccgatagtgtcctaatttttgaactcacggatatagttcactgtcgtatggccgctcct +agtcaacgtaaggcggttctttctacgctcgtcggcaggtatggtcgccgaacgaagctgtatgaagcagcc +cattctgatgtccgtgagtctttagggaggttcatccctactatcggaccggtccaggccaccacatgtgag +ctttatgaactggttgaggccatggtggagaaaggccaggatggttccgctgtgcttgagcttgacctctgc +aaccgtgatgtctcgcgtatcacattcttccagaaggactgtaacaaatttacaacgggtgagactattgcc +catggtaaggtgggccaggggatttcggcctggagtaaaaccttctgtgctttatttggcccatggttccgt +gccatcgagaaggagattctagctttgctcccgcccaatattttctatggcgatgcctatgaggagtcagtg +ttttctgcggccatttctggggctggctccagtatg---gtttttgagaatgatttttctgagtttgacagc +acccaaaataatttctctct------------------tggccttgagtgtgttattatggaggagtgtggc +atgccccaatggcttattcgactgtaccatttagttagatcagcctggattctgcaggccccgaaagagtct +ttgaaaggtttctggaagaagcactccggcgagcctggtactctcctttggaacaccgtctggaacatggca +atcatagcacactgctatgaattccgtgacctgagagtggcagcgtttaaaggggatgattcagttgttctt +tgcagcgattaccgtcagagccgtaatgcggccactctgatagccggttgtgggttaaaattgaaggttgat +taccggcctataggtttgtatgccggcgttgtagtggctccgggcctcggggcacttcctgatgttgtccgc +tttgcaggtcgattatctgagaagaactggggtccgggccccgaacgcgccgaacagttgcgcctagcagtt +tgtgattttctccgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtacataacctcatcggcatgctacagactattgctgatgggaaggcccattt +tactgagactgttaagcccgtgctggatcttacaaattctatcatacagaggttagaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaatccggggctggagctcgcccta +gacagccggtccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccactgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtttcaccagcgcctgatacggccccagtccctgatgttgactctcgtggcgctatcctgcgccgtca +gtataatctgtccacctctcctttaacttcatctgtcgcctctggaactaatcttgtcttgtatgctgcccc +gcttaatcctctcctgcctcttcaggacggcaccaatactcacatcatggcgactgaggcgtctaattatgc +ccagtaccgggttgtccgggctacaatccgctatcgccccttggtgccgaatgccgtcggtggttatgcaat +ttctatttctttctggcctcagactacaactacacccacctctgtcgacatgaattctattacttctactga +tgttaggattttagtccagcctggcatagcttctgagttggtcatcccgagtgagcgccttcactatcgtaa +tcaaggctggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggcttggttatgctttg +tattcatggctcccctgttaattcttataccaacacgccctacactggggcgctggggcttcttgattttgc +acttgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgttatactagtacagc +ccggcaccgcctgcgtcgtggtgccgatgggacagctgagcttacaaccactgcagccacacgttttatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggtgaggtgggccgcggtatagccctaacgctatt +taatcttgctgatacacttctcggtgggttgccgacagaattgatttcgtcggctggaggtcaactgtttta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggataagggtattgctataccacacgatatagatttaggggactcccgtgtggttatacaagactatgacaa +ccaacacgaacaggaccggcccaccccgtcgccggccccatcccgtcccttttcagtccttcgggccaatga +tgtcttgtggctctc-----------------------------tctgactgcagctgaatatgac------ +cagactacttatggctcatcgaccaaccctatgtatgtttcagatactgtcacatttgt---taatgtggcg +acaggcgcccaggctgttgcccgatcccttgattggtccaaggtcactctggacggccggccactcactacc +at-----ccagcagtactccaagacattttatgtgc-tgccgcttcgcggtaagctttccttttgggaagcc +ggtacgactaag--gctggctacccttataattacaacactactgctagtgaccagattctgattgagaatg +cagccggccat------cgtgttgctat-atctacttacactactagccttgg--------------cgccg +gccctgtgtctgtttc-tgcagtcggcgttcttgctccgcactctgctttagctgtgcttgaagatactatt +gatt---------atcccgcccgtg----cccatacttttgatgatttctgccccgagtgccgcaacc---t +cggcctacagggctgtgctttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----tc-c-c--c---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444071.1/17141/1-7141 |Hepeviridae isolate HEPAC27, partial genome +-------------------ctcacagtctgtgt-----gtatg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcatcactactgccattgag---caagctgctctggc +cgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagctggttttccgacctgaagtgctctggaatcatcctatccaacgggt +tattcataatgagttagaacagta---ctgccgggccc-gggctggtcgctgtttagaggttggggcccatc +caagatccatcaatgacaacccgaatgttttgcatcgctgcttcctacgaccagttggcagagatgttcagc +gctggtattctgcccctacccgtggccctgcggccaactgccgccgctctgctttgcgtggcctcccacccg +ctgaccgcacctactgttttgatggattctctcgctgcccgtttgctgcggagactggtgttgccctctatt +cattgcatgacctctggccggccgatgttgcagaggccatggcccgacatgggatgacacgcttatatgctg +cactacatctc-cccccagaagtactactaccacctggtacttaccacacaacttcataccttcttattcac +gacggcgatcgcgccgttgtgacttatgagggtgacactagtgcaggttacaaccatgatgtttctatactc +cgcgcatggatccgcacaactaagatagttggcgaccatccgctggtgatagagcgtgtgcgggctattggc +tgccactttgtgctgctgctcactgcggcccctgagccgtcaccaatgccttatgtcccatacccccggtcg +acagaggtgtatgttcgttccatatttggccctggc---------gggtccccgtccctgtttccatcagct +t----------gctctacaaaatcca-catttcatgccgtcccagttcatatttgggaccggctcatgctct +ttggtgccaccttggacgatcaggcgttttgctgctcacggcttatgacctaccttcgtgggattagttaca +aggtcactgtaggtgcccttgttgctaatgaagggtggaacgcttcggaggatgctcttaccgctgttatca +ccgcagcgtacttgaccatttgtcatcagcgttatctycgcactcaggctatatccaagggcatgcgccggc +tggaggttgagcatgctcaaaaatttattacaagactctatagttggctgtttgagaagtc---------tg +gccgtgactacatccccggccgtcagctccagttctatgcacagtgccgccgctggttatcggcgggtttcc +acctcgacccaagggtgcttgtttttgatgagtctgctccctgc---cgttgcaggacgtttctcaagaa-- +----ggttgcaggtaagttctgttgttttatgaagtggctggggcagga------gtgcacctgcttcctgg +----------------aaccagctgagggtctggttggtgaccatggc--------cacgataatgaagcct +atgagggttctgaggttgaccaggccgagcccgcccatcttgatgtttctgggacctatgccgtccatggga +gccaactcgaggctctgtacagggcgcttaacatcccgcacgacattgccgctcgagcctcccgtttaactg +ccactgttgaacttactgcaggcccagaccgtttggagtgtcgcactgtgctcgggaataagaccttccgga +caacggtggttgatggcgctcatcttgaggcgaatggtcc------------------------cgagcagt +atgtcctctcgttcgacgcctcctgccagtctatgggggccgggccgcataacctcacctatgagctcactc +ctgctggtttgcaggttaagatttcatct-------aatggcctggattgcactgcaacattcccc---ccg +ggcggagcccctagtgcagctccgggggaggtagcagctttttgcagtgccctctataggtacaacaggttt +acccagcgccattcgcttacaggcggtttgtggctgcatcctgaggggctattgggcatcttcccccctttt +tcccccgggcatctttgggagtccgctaatcctttttgtggggagggaactttgtacacccggacttggtca +acatctggtttttctagtgatttttctccccctgaggcggctgccgctgtgccggccgctgccac----agg +gttgctcc---accctacaacccctgttagtgacat-----------------ttgggtgtt---------- +---------gccgccacct----tctgaggggt--------------ctcaggttgatgcagcgcctgctcc +tctag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tctctgagcccgttcaaccgcccggc +cctgctaggccgaag-------------------------------------gcccccgtgtgtaagccacc +aacaccacc--------------------------------------acctccgcgtacccgccgcc----- +-------------------tcctctacacttatccggatggggcgaaggtgtatgcggggtcattgtttgag +tcagactgtgattggctggtcaatgcgtcgaaccccggccatcgtcccggaggtggcctttgccatgctttt +taccaacgctaccccgagtcgt------tccacccaactgagttcattatgcgtgatgg---ccttgccgca +tatactctgactcctcggcctattatccatgcggtggctcccgattatagggttgagcagaacccgaagagg +cttgaggcagcataccgagagacctgctcccgccgtggcaccgccgcttacccactcctcggctcaggtata +taccgagttcccgttagcctcagctttgacgcttgggagcgtaaccaccgccccggggatgagctttacttg +accgacctcgccgctacc-------------------------------------------------tggtt +cgaggccaataagccagcaca--------------------------------------------------- +------------------------------------------accggcccttacaataactgaagatacagc +cc------------gtacagccaacctagcactagagatcg------------acgctgctacggaggttgg +ccgggcttgt---gccggttgtacrgttagccctggggttgtgcactatcaatttaccgccggggttccagg +ttcggggaagtcgcggtctatacagcaaggggaygttgatgtggtggttgtcccyactcgggagcttcggaa +tagttggcgtcgccggggttttgcagctttcacgcctcacacggcagcccgcgttaccacgggccgtcgtgt +cgtgattgatgaggccccatcccttccgccgcacctactgcttttacacatgcagcgggcctcgtcggtcca +ccttctcggcgacccaaatcagatccctgctatagactttgagcatgccggtttggtccccgcaatacgccc +cgagcttgcacccaccagctggtggcatgttactcaccgctgccccgctgatgtgtgcgagcttatacgcgg +ggcctatcccaaaatccagactactagccgcgtgctgcggtctttattctggaatgag------cctgccat +tggccagaagttagtctttacacaggccgctaaggctgccaaccccggtgcgattacagttcatgaggccca +gggcgccactttcacggagactacaattatagccacggccgatgccagggggctcatccaatcttcccgagc +tcacgccatagtcgcacttacccgccacacagagaagtgcgttatccttgatgcccccggtttgttacgtga +ggttggtatatctgatataattgtcaacaatttc------------------------------tttctcgc +cggtg--gggaagtgggccaccaccgcccctctgtgataccccgcggcagtcctgaccagaacctcgcgac- +-----attacaggcttttccaccttcctgtcagatcagtgcttatcatcagttagctgaggagctgggccac +cgcccggcccccgtcgctgccgtcctgcccccctgccccgaactcgagcagggcctgctgtatatgccacaa +gagctcacggtgtctgatagcgtgytggtctttgaactcacggacatagttcattgccggatggctgcccct +agccagcggaaggctgtcctatcgacgcttgtaggtaggtatggccgccggacgaagctgtatgaggcggct +cactccgatgtccgtgagtccttgacaagattcatccccaccatcgggcccgttcaggcaactacgtgtgag +ctatacgaactggttgaggccatggtggataagggtcaggacggctctgccgtrcttgagcttgatctttgc +aatcgtgatgtatcgcgtattacattcttccagaaggattgtaacaagttcaccacaggggagaccattgcc +cacggcaaggtcggccagggcatctcggcttggagtaagaccttctgtgccctctttggcccgtggttccgt +gctattgaaaaagaaatactggccctgctcccgcccaacatcttctacggcgatgcatatgaagagtctgtg +tttgctgccgccgtgtctggggcaggctcatgcatg---gtatttgagaatgatttttcagagtttgatagc +actcaaaataatttctccct------------------tggccttgagtgtgtagtcatggaggaatgcggc +atgccccagtggctaattcggttgtaccacttggttcggtcagcctggattctacaggcgccgaaggagtct +cttaaagggttttggaagaagcattctggygagcccggcaccctcctttggaacaccgtttggaatatggcg +atcatagcacattgctatgagtttcgtgatcttagggttgccgccttcaagggagatgattcggtggtcctc +tgtagcgactaccgtcaaagccgtaacgcggcggccctgattgcaggttgcgggctcaaattgaaggtcgat +taccgccctatcgggttgtatgccggtgtggtggtggcccccggcctggggacgctacccgatgtagtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgagccgagcagctrcgtcttgctgtt +tgtgattttcttcgagggctgacgaatgttgcgcaggtatgtgttgatgttgtatcccgag-------ttta +tggggttagccctgggctggtacataaccttattggcatgttgcaaaccattgctgacggtaaggcccattt +tacagagactgttaaacctgtgcttgacctcacgaactctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgcgccctagggctgttyt +gytgctgttcctcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagtcgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccaccgatgtcatttcgcaacccggggctggagctcgccctc +gacagccatcccg---------------ccccctcggcacctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccacgtcgtcgacctgcccca---------actggggctgcgccgctgac +tgctatatcacctgctcctgatgcggcccccgtgcctgatgttgattctcgtggcgctatattgcggcgcca +gtataatttatctacatccccactcacatcatccgttgcttcgggtaccaatctggttctttatgctgcccc +gctaaaycccttgttacctcttcaggatggcactaacactcacatcatggctactgaggcgtccaactatgc +ccagtaccgggttgtccgagctacgatccgttacaggccgttggtgccgaatgctgtcggtggctatgcaat +ctccatctcattttggcctcagaccactaccacccctacgtctgttgacatgaattctattacctccactga +tgttaggatcctagttcagcccggtattgcctccgagttagttattcctagtgaacgcctccactaccgtaa +ccaaggttggcgctctgtggagacctcgggtgtggccgaggaggaggccacctctggtttggtgatgctatg +cattcatggttcccccgttaactcctacaccaacaccccctataccggggcgcttgggctccttgactttgc +tctagagcttgagtttaggaacttgacacccgggaacaccaacacccgtgtttcccggtatacaagcactgc +ccgtcatcggctgcgccgcggcgccgatggcaccgctgagcttaccaccacagcggctacacgtttcatgaa +ggacytgcacttca---ccggtacgaat---ggggtcggtgaggtgggccgtggtattgctcttacactctt +taatcttgctgacacgctcctcggtggtttgccgacagaattaatttcgtcggctgggggacagttgttcta +ttcccgccccgtcgtctcagccaatggcgagccggccgttaagttatatacatctgtggagaacgcgcagca +ggataaagggattgctattccacatgacatagacttaggtgactctcgtgtggttattcaagattatgataa +tcagcacgagcaggatcggcccaccccttcgcccgccccatctcgccctttttcggttcttcgtgctaatga +tgttctttggctttc-----------------------------tcttaccgccgccgagtatgac------ +cagactacatatgggtcttccaccaacccaatgtatgtctcagatactgtcacatttgt---caacgtggct +acaggggcccaggctgttgcccgctctcttgactggtctaaagttactctagatggccgcccccttactacc +at-----tcagcagtattccaaaacattttatgttc-tcccgcttcgcgggaagttatccttttgggaggct +gggacaactaaa--gctggttatccttataattataacacgactgctagtgaccagatcttaattgaaaatg +cagctggtcac------cgtgttgccat-ctctacttacactaccagccttgg--------------tgctg +gtcctgtgtcagtttc-tgcagtcggtgtgttagccccacattcggctcttgcagttcttgaggatactact +gact---------accctgctcgcg----cccacacttttgatgatttctgtccggagtgtcgcgccc---t +tggtttgcaggggtgtgccttccagtc--------tactattgctgagcttcagcgtct------------- +--------taraatgaaggtaggc------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444072.1/17233/1-7233 |Hepeviridae isolate HEPAC168, complete genome +-------------------------gtgcacgagtg--------------------------ggtcgacgc- +---catggaggcccatcagttcattaaggctcctggcatcactactgccattgag---caagctgctctggc +cgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcaactggttttccgacctgaagtgctctggaatcatcctatccaacgggt +tattcataatgaattagaacagta---ctgccgggccc-gggctggtcgctgtttagaggttggggcccacc +cgagatccatcaatgacaacccgaatgttttgcatcgctgcttcctacgaccagttggtagagatgttcagc +gctggtactctgcccctacccgtggccctgcggccaactgtcgccgctccgctttgcgtggcctcccccccg +ttgaccgcacctactgctttgatggattctctcgttgcccgtttgctgcggagactggtgttgccctttatt +cattgcatgacctctggccggccgatgttgcagaggccatggcccgacacgggatgacacgcttatatgctg +cactacatctc-ccccctgaagtgttactaccacctggtacttaccacacaacttcataccttcttattcac +gacggcgatcgtgccgttgtgacttatgagggtgacactagtgcaggttataaccatgatgtttccatactc +cgtgcatggatccgcacaactaagatagttggcgatcatccgctggtgatagagcgtgtgcgggctataggc +tgccactttgtgttgctgctcactgcggcccctgagccgtcaccaatgccttatgtcccatacccccggtcg +acagaggtgtacgttcgttccatattcggtcctggc---------gggtctccgtccctgtttccatcagct +t----------gctctacaaaatcta-catttcatgccgtcccagtccatatttgggaccggctcatgctct +ttggtgctactttggacgatcaggcattttgctgctcacggcttatgacttaccttcgtgggattagttaca +aagttaccgtgggtgccctcgttgctaatgaagggtggaatgcttcggaggacgctcttaccgctgttatca +ccgcagcgtacttgaccatttgtcatcagcgttacctccgcactcaagctatatccaaaggcatgcgccggc +tggaggttgagcatgctcaaaaattcatcacaagactctatagttggctgtttgagaagtc---------tg +gccgtgactacatccccggccgccagctccagttctatgcacagtgccgccgctggttatcggcgggtttcc +acctcgacccaagggtgcttgtttttgatgagtctgcgccttgc---cgttgcaggacgtttcttaagaa-- +----ggttgcaggtaagttctgctgttttatgaagtggctgggacagga------gtgcacctgcttcctgg +----------------aaccagctgagggtctggtcggtgatcatggt--------cacgataatgaagcct +atgagggttctgaggtcgaccaggccgagcccgcccatcttgatgtttctgggacttatgccgttcatggga +gccaactcgaggccctgtacagggcgcttaacatcccgcacgacattgccgctcgagcctcccgtttaaccg +ccactgttgaacttactgcaggtccagaccgtttggagtgccgcactgtgcttgggaataagacttttcgga +caacggtggttgatggcgcccatcttgaggcgaatggccc------------------------cgagcagt +atgtcctttcgtttgacgcttcctgccagtctatgggggccgggccgcataatctcacctatgagctcactc +ctgccggtttgcaggttaagatttcatct-------aatggcctggattgcactgcaacatttccc---ccg +ggcggagcccctagtgcagctccgggggaggtagcagctttttgcagtgccctctataggtacaacaggttt +acccagcgtcattcgcttacaggcggtttgtggctgcaccctgaggggctattgggcatcttccctcccttt +tcccccgggcatctttgggagtccgctaaccctttttgtggggagggaactttgtatacccggacttggtca +acatctggtttttctagtgactttttcccccctgaggtggttgccgctgtgccggccgctgccac----agg +gttacccc---atcctacaccccctgtcagtgacat-----------------ttgggtgtt---------- +---------gccgccaccc----tctgaggagt--------------ctcaggttgatgcagcgcctgtccc +cccag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ytcctgggcctgttcaaccgctcggc +cctgctaggctgaag-------------------------------------gcccctgtgcgtaagccacc +aacaccacc--------------------------------------acccccgcgtacccgccgcc----- +-------------------tcctctacacttatccggatggggcgaaggtgtatgcggggtcactgtttgag +tcagactgcgattggctggtcaatgcgtcgaatcccggccatcgtcctggaggtggcctttgccatgctttt +taccaacgctaccccgagtctt------tccacccaactgagttcattatgcgtgacgg---tcttgccgca +tatactttggttccccggcctataatccacgcggtggctcctgattatagggttgagcagaatccaaagagg +cttgaggcagcataccgagagacctgctcccgccgtggcaccgccgcttatccactcctcggctcgggcata +taccaagttcccgttagcctcagctttgacgcttgggagcgtaaccaccgccccggggatgagctttacctg +accgacctcgctgccacc-------------------------------------------------tggtt +cgaggccaataagccagcaca--------------------------------------------------- +------------------------------------------accggccctcacaataactgaagatacagc +cc------------gcacagccaacctagcactagagatcg------------acgctgctacggaggttgg +ccgggcttgt---gccggttgtacagttaatcctgggattgtgcactatcaatttaccgccggggtcccagg +ttcagggaagtcgcggtctatacagcaaggggacgtcgatgtagtggttgtccccactcgggagcttcggaa +tagttggcgtcgccggggtttcgcagctttcacgcctcacacggcggcccgtgttaccacgggccggcgtgt +cgtgattgatgaggccccatcccttccgccgcacctgctgcttttacacatgcagcgggcctcgtcggtcca +cctcctcggcgacccaaatcagatccctgctatagactttgagcatgccggcctggtccccgcaatacgccc +cgagcttgcacccaccagctggcggcatgtcactcaccgctgccccgctgatgtgtgcgagcttatacgcgg +ggcctaccccaaaatccagactactagccgcgtgctgcggtctttattctggaatgag------cctgccat +tggccagaagttagtctttacacaggccgctaaggccgccaaccccggtgcgatcacagtccatgaggccca +gggcgccactttcacagagactacaattatagccacggccgatgctagggggctcattcaatcttcccgagc +tcacgccatagtcgcacttacccgccatacagagaagtgcgttatccttgatgcccccggtctgttacgtga +ggttggtatatctgatataattgttaacaatttt------------------------------ttcctcgc +tggtg--gggaagcgggccatcaccgcccctctgtgataccccgtggcagtcctgaccagaacctcgcgac- +-----attacaggcttttccaccctcctgtcagatcagtgcttatcatcagttagctgaggagctgggtcac +cgcccggcccccgtcgctgctgtcctgcccccttgccccgaacttgagcagggcctgctgtatatgccgcag +gagctcactgtgtctgatagcgtgctggtttttgaactcacggacatagttcattgccggatggctgcccct +agccagcggaaggccgtcctatcgacgcttgtgggtaggtatggccgccggacgaagctgtatgaagcagct +cactccgatgtccgtgagtccctgacaagattcatccccaccatcgggcccgttcaggcaactacgtgtgag +ttatacgaactggttgaggccatggtggacaagggtcaggacggctctgccgtacttgagcttgatctttgc +aatcgcgatgtatcgcgtattacattcttccagaaagactgtaacaagtttaccacaggggagaccattgct +catggtaaggtcggccagggtatttcggcttggagcaagaccttctgcgccctcttcggcccgtggtttcgt +gctattgaaaaagaaatactggccttgctcccgcctaatatcttctacggcgatgcatatgaggagtctgtg +ttcgctgccgctgtgtctggggcaggttcatgcatg---gtatttgagaatgatttttcagagtttgacagt +actcaaaataatttctccct------------------tggcctcgagtgtgtagtcatggaggaatgcggc +atgccccagtggttaattcggttgtaccacttggttcggtcagcctggatcctacaggcgccgaaggagtct +cttaaagggttttggaagaagcattctggtgagcccggcaccctcctctggaacaccgtctggaatatggcg +atcatagcacattgctatgagtttcgtgatcttagggttgccgcctttaagggggatgattcggtggtccta +tgcagcgactaccgtcaaagccgcaacgcagcggccctaattgcaggttgcgggctcaagctaaaggttgat +tatcgccctgtcggattgtatgccggcgtggtggtggcccccggcctggggacgctacccgatgttgtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggccgagcaactgcgtcttgctgtt +tgtgattttcttcgagggctgacgaatgttgcgcaggtatgtgttgatgttgtatcccgag-------ttta +cggagttagccctgggctggtacataaccttattggcatgttgcaaaccattgctgatggtaaggcccactt +tacagagactgttaaacctgtgcttgaccttacgaactctatcatacaaagggtggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gttgttgctcctcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcagtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgctgacgtcatttcgcaacccggggctggagctcgccctc +ggcagccaccccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgttgccccacgtcgtcgacctgcccca---------actggggctgcgccgctgac +tgctatatcacctgctcctgatacggcccccgtgcctgatgttgactctcgtggcgctatattgcggcgcca +gtataatttatctacatccccacttacatcatccgttgcttcgggtactaatctggttctttatgctgcccc +gctaaatcccttgctaccccttcaggatggcactaacactcacatcatggctactgaggcatccaactatgc +ccagtaccgggttgtccgagctacgatccgttacaggccgttggtgccgaatgctgtcggcggttatgcaat +ctccatttcattttggccccagactactaccacccctacgtctgttgacatgaattctattacctccactga +tgttaggatcctagttcagcccggtattgcatccgagttagttatccctagtgagcgcctccactaccgtaa +ccaaggctggcgctctgtggagacctcgggtgtggctgaggaggaggccacttctggtctggtgatgctctg +tatccatggttcccccgtcaattcttacaccaataccccctataccggggcgcttgggctccttgactttgc +cctagaacttgagtttaggaatttgacacccgggaataccaacacccgtgtttcccggtatacaagtactgc +ccgtcatcggctgcgccgcggcgccgatggcaccgctgagcttaccaccacagcggctacacgtttcatgaa +ggacctgcacttca---ccggtacgaat---ggggtcggtgaggtgggccgtggtattgctctcacactctt +taatcttgctgacacgctcctcggtggtttgccgacagaattaatttcgtcggctggaggacagttattcta +ctcccgccccgtcgtctcagccaatggcgagccggctgttaagttatatacatctgtggagaacgcgcagca +ggataaggggattgctattccgcatgacatagacttaggtgattcccgtgtggttattcaagattatgataa +tcagcatgagcaggatcggcccaccccttcgcctgccccatctcgccctttttcggttcttcgtgctaacga +tgttctatggctttc-----------------------------tcttactgccgccgagtatgac------ +cagactacatatgggtcgtctaccaacccaatgtatgtctcagatactgttacatttgt---caatgtggct +acaggagcccaggctgttgcccgctctcttgactggtctaaagtcaccctagacggccgcccccttactacc +at-----tcagcagtactctaaaacattttatgtcc-tcccgcttcgcgggaagctatctttctgggaggct +gggacaactaaa--gctggttacccttataattacaacacgactgctagtgaccagattttaattgaaaacg +cagctggtcac------cgtgttgctat-ctctacttatactaccagccttgg--------------cgctg +gccctgtatcagtttc-tgcagtcggtgtgttagccccacattcggcccttgcagttcttgaggatactatt +gatt---------accctgctcgcg----cccacacttttgatgatttctgtccggagtgtcgcgccc---t +tggtttgcaggggtgtgccttccaatc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattaa-tt----t--cctt---t------gt +gccc-cct--------tc-atag-tccct----gc-tt---t-----------------att-t-------c +ttttttct----gc----------------tgtccgcgcccccag---------------------aaaaaa +aaaaaaa---------------aaa----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444073.1/17294/1-7294 |Hepeviridae isolate HEPAC110, complete genome +--------------------------------tcag-catatg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcatcactaccgccattgag---caggctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatcccgtattcagactgagatcct +tattaacctgatgcaaccccggcagcttgtttttcggcctgaagttctttggaatcacccgatccagcgagt +tatacataatgagctggagcaata---ctgccgagccc-gcgctggccgctgtcttgaggtgggtgctcacc +caagatccatcaatgacaaccccaatgttctgcaccggtgctttcttcgcccggtcggtagagacgtccagc +gctggtattctgcccccactcgtggtccagcggctaattgccgccgctctgcgctacgtggtttgccccctg +tcgaccgtacatactgcttcgacgggttctcccgctgcgcctttgccgctgagaccgggattgctttatatt +cactgcatgacctttggccctcggatgttgcggaggctatggctcgccacgggatgacgcgattgtatgctg +ccctccaccta-ccccctgaggttctgttaccacctggcacgtatcacacaacttcctatcttttgattcac +gacggcaatcgtgccgtcgtgacttatgagggtgatactagtgcgggctataatcacgatgtgtctatactt +cgtgcatggatccgcaccactaaaatagttggtgatcacccactggtgatagagagagtccgcgccattggc +tgccattttgtcctactcctcactgcagcccccgagccatccccaatgccttatgttccgtaccctcgctca +acagaggtgtatgttagatccatatttggtcctggt---------gggtcaccytctctttttccgtcagct +t----------gctctactaagtcta-cattccacgccgtcccggttcatatctgggaccggctaatgctct +ttggtgccaccttagatgaccaggccttttgctgctcgcggcttatgacctatctccgysggattagctata +aagtgactgtcggcgcacttgtcgccaacgagggctggaatgcctcggaggatgcgctcaccgctgttatta +ctgcagcgtatctgaccatctgccatcagcgctacttacggacacaggccatttccaaaggcatgcgtcggt +tagaggttgagcatgcccaaaagtttatcacaaggttatatagttggctgtttgaaaagtc---------ag +gccgtgactacatccccggtcgccagctccagttttatgcacagtgccgccgctggctctcggccggattcc +atctggatcctagagttctcgtttttgatgaggcggtcccctgc---cgctgccggagcttcttaaagaa-- +----agttgccggaaaattttgttgttttatgaaatggttgggccagga------gtgcacctgctttttag +----------------aaccagcggaaggcctggttggtgactgcggc--------catgataacgaggcct +atgaggggtctgaggtggaccccgccgagcctgcccatcttgatatttccgggacctatgcggtccacggcc +gtcagcttgaggctctatatagagcgcttaatatyccggatgacatcgcggctcgtgcattacgtctgacag +ctactgtagaacttgccgccagcccaggccgactcgagtgccgtacggtgcttgggaataagacttttcgca +catcaataactgatggtgcccatctcgaggccaacggtcc------------------------cgagcagt +atgtcttgacatttgatgactctcgccaggctatgggggctgggccacacagccttacgtatgaacttgttc +ctgccggcctgcaggtcaaaatatcttgt-------aatggcctggattgtactgccatattcccc---cct +ggtggggcaccaagtgcagcaccgggtgaagtggcggctttctgtagcgccttatacaggcacaataggttc +acccagcgtcactcgctgaccggcgggctatggctgcaccctgaggggcttcttggcctgttcccccctttc +tccccggggcacctttgggagtctgcaaaccccttttgcggtgagagcacactctacacacgaacatggtct +acatctggtttttccagcgacttctccccacccgaggcggcctacgcckscccagcactcgatat----ggg +gctaccctcgggcgcctcctcgtctgctagtgatat-----------------ctgggcgtt---------- +---------cccaccgccc----tctgagaggt--------------cggcgaccacttcaccacccgtaat +ttcagttaataagccagctaa---------------------------------------tccgcc------ +------------------------------------------------------------------------ +-aagtcttgc-------------------------------------------------------------- +-------------tacacct----aggycccccgytcgtgagccaccyacaccaccaccggctcycaccccg +g---------------------------------------------tcagcaaaccagctagcccgtctagc +cccactacacacagg-------------------------------------ycccctgcccgtaagccacc +cacaccgcc--------------------------------------accggctcgcactcgccggc----- +-------------------tcctttatacataccctgatggggccaaggtgtatgcaggctctttatttgag +tcagactgcgactggcttgttaatgcatctaatcctggccaccgtcctggcggcggyctttgccatgcattt +taccaacgcttcccggagtcat------ttcatccaactgattttgtcatgcgtgaagg---tctcgccgcg +tatactctgagcccgcgtccgatcattcacgcagtggcccccgactatagggttgagcagaaccccaagagg +ctggaggcggcatatcgtgagacctgctcccgcctcggcacagccgcgtatcctttactggggtcagggatt +taccaggttcctgtgagtttaagcttcgacgcctgggagcgtaaccatcgcccaggtgatgaactgtatctt +actgagccagctgctgcc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacaccgc +cc------------gcacggctaaccttgcgcttgagattg------------actctgccactgaggtggg +ccgtgcttgc---gccggctgcactattaaccccgggattgttcactaccagttcaccgccggggtccctgg +ctctgggaagtctagatctatacagcagggggatgtygatgtcgtggtcgtgccaactcgtgagcttcgtaa +cagttggcgacgccgtggctttgctgcttttacaccccatacagcagctcgtgttactgccggccggcgtgt +ggtgatagatgaggcaccttcgcttccaccgcacttgttgctgctccatatgcagcgagcctcatcggtcca +tctccttggtgaccccaaccagattcctgccattgactttgagcacgctggtctggtcccagcgatccgtcc +tgagttagctcctactagttggtggcatgttacccaccgctgccccgctgatgtatgtgagctcatacgcgg +ggcctaccccaagatccagacgactagtcgtgtgctgagatccttattttggaacgag------cctgcggt +gggtcagaggctggtcttcacgcaggcagccaaagcggccaatcctggcgcaatcaccgtccatgaggccca +gggtgccacgtttactgagactactatcatagccacggccgatgctagaggtcttatccaatcttcccgcgc +acatgccatcgttgcgcttactcgccatacagaaaagtgtgtcatttttgacgcccctggcctgttgcgcga +ggtcggcatctctgacataattgttaataacttt------------------------------ttcctggc +cggtg--gcgaagtgggccaccatcgcccttcaactataccgcgcggcaacccagaccgaaacttagacac- +-----cctacaggcgttccccccgtcctgccaaattagtgcataccaccagctggctgaagagctgggccac +cggccggcccctgtggccgccgttttgcccccttgccctgagcttgagcaggggttactctatatgccgcag +gagcttacggtgtctgatagcgtcctaatttttgaactcacggacatagttcactgccgtatggccgccccc +agtcagcgtaaggcggtcctttctacgctcgtcggtaggtacggccgccgaacgaagctatatgaagcggcc +cattctgatgttcgtgagtctttaggaaggttcatccctactatcggcccggtccaggccaccacatgtgag +ttatatgagttggttgaggccatggtggagaagggccaggatggctccgccgtgcttgagctcgacctctgc +agccgtgatgtctcgcgtattacattcttccagaaggattgtaacaaatttacaacaggtgagaccattgcc +cacggcaaggtgggccagggcatttcggcttggagtaagactttctgtgctttatttggtccgtggttccgt +gctattgagaaggagattctggctctgctcccacccaacattttttatggcgatgcctatgaggagtcagtg +ttttctgcagccatttctggggctggctccagtatg---gtttttgagaatgatttttctgagtttgatagc +acccaaaacaatttttctct------------------tggccttgagtgtgtcattatggaggagtgtggc +atgccccagtggcttatccgactgtatcatttagttagatcggcctggactttgcaagcccctaaagagtct +ttgaaaggtttctggaagaagcattcyggcgagccyggcaccctcctttggaacactgtttggaacatggct +atcatagcacactgctatgagttccgcgacctgagggtggcagcgtttaagggggatgattcagtggttctt +tgcagtgattatcgccagagccgcaatgcggctaccctgatagccggctgtgggttgaaattgaaggttgat +taccggcctataggtttgtatgccggcgtcgtagtggccccgggcctcggggcacttcctgatgttgtccgg +ttcgccgggcgactatctgagaagaactggggcccgggccccgaacgcgccgagcagttgcgcctggcagtt +tgtgacttccttcgagggctgacgaatgtcgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacagaccattgctgatgggaaggcccactt +tactgagactattaaacctgtgctggatcttacaaattctattatacagaggttggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gctgttgctcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcttaccacaatccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtttcaccagcacctgacacggccccagttcctgatgttgactctcgcggtgctatcttgcgccgtca +gtataatctgtccacctctccattaacttcatctgttgcttctggaactaatcttgtcctgtatgccgcccc +gcttaaccctcttctgcctctccaagacggcaccaatactcacatcatggcgactgaggcgtctaattacgc +ccagtatcgggttgtccgggctacaatccgttatcgccctttggtgccgaatgccgtcggtggttatgcaat +ttcaatttccttctggccccagactacaactacacccacctctgttgacatgaattccattacttctactga +tgttaggattttagtccagcctggcatagcctccgagctggtcatcccgagtgagcgccttcactaccgtaa +tcaaggctggcgttctgttgagacgtcgggtgtggctgaggaggaggcgacatcaggcctggtcatgctttg +tattcatggctcccctgttaattcctataccaatacaccctatactggggcattagggctcctcgactttgc +actcgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgatatactagtacagc +ccggcaccgtttgcgccgcggtgccgatgggacagccgagcttacaaccaccgcagccacacgttttatgaa +ggacttgcatttca---ctgggacaaat---ggagttggtgaggtaggccgcggtatagccctaacgctatt +taatcttgctgatacacttctcggcgggttgccgacagaattgatttcgtcggctggaggtcaactgttcta +ctcccgcccggtcgtctcagccaatggcgagccgactgttaagttatacacttctgtcgagaatgcacagca +ggacaagggcattgctataccacatgatatagacttaggggattcccgcgtggttatacaagactatgacaa +ccaacatgagcaggatcggcctaccccgtcgccggccccgtcccgccccttctcggtccttcgagccaatga +tgttctgtggctctc-----------------------------tctgactgcggctgaatacgac------ +cagaccacctatggctcgtctaccaaccccatgtatgtttcagatacagtcacatttgt---taatgtggcg +acaggtgcccaggccgttgcccgatcccttgattggtccaaggtcactttggatggtcgaccacttactacc +at-----acagcagtactctaagacattttatgtac-taccacttcgtggcaagctttccttttgggaagct +ggcacgactaaa--gctggctacccttacaattataacactactgctagtgatcagattctgatcgagaatg +cagccggtcac------cgtgttgccat-atctacttataccactagtcttgg--------------tgccg +gccctgtgtctgtttc-tgcggtcggcgttcttgccccgcattctgctttagctgtgcttgaagatactatt +gact---------atcctgcccgtg----cccatactttcgatgatttctgccctgagtgccgcaatc---t +tggcttgcagggctgtgctttccaatc--------tactgttgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt-----c-cctt-ttt------gt +gccc-cct--------tc-tatg-tt-tc----gc-cc-cgt----------------tatt-t-------c +tttttttt---------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444074.1/17205/1-7205 |Hepeviridae isolate HEPAC188, partial genome +--------------------------gtatctatca-gacatg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcatcacaaccgccattgag---caagctgctctggc +tgcggccaattctgccttggcgaatgctgtggttattcggccgtttttgtcccgcgtacagactgaaattct +tatcaaccttatgcaacctcgacaactggtctttcgcccagaggtcttttggaatcaccctatccaacgtgt +tatccataatgagttggaacaata---ctgtcgggccc-gcgcggggcgttgtctcgaagttggagcacacc +cgagatctattaatgataatccaaacatcctgcaccggtgtttcctccggcccgtcggcagggatgttcagc +ggtggtactccgctcccacccgtggccccgctgctaactgccgccgctccgcgctccgtggcctcccgcctg +ctgaccgtacctactgctttgacgggttttccggctgtgctttcgctgctgagactggcattgctttatact +ctctgcatgatatgtggcccgctgacgtcgcggaggccatggcgcgtcatggaatgacgcgtctctttgctg +tattacatctc-ccccccgaggtcctactgccaccaggtacctatcacaccacgtcttaccttttgatccat +gacggcaatcgcgctgttgtgacttatgaaggtgatactagtgctggttataatcatgatgtctctattctt +cgtgcctggatccgcacgacaaaaattgtcggtgaccaccctttagtaatggagcgcgttcgcgctattggc +tgccattttgtgttattgcttactgctgcccccgaaccatcccctatgccctatgtcccttttccccgttcg +acagaggtatttgttcgctcaatattcggcccgggt---------ggttctccttcccttttcccgtcagct +t----------gctctactaaatcta-cttttcacgccgtccctgtgcatatctgggataggcttatgcttt +ttggtgccacactcgatgatcaagctttttgctgctcgcggcttatgacttatctccgtggcattagttata +aagtcactgtcggcgcccttgttgcgaacgagggctggaatgcctctgaggatgctctcactgcggttatca +ctgcggcatatctcaccatctgccatcagcgctacctccgcacccaggcaatctctaaaggcatgcgtcggc +tggagctcgagcatgcccagaagtttattaccaggctctatagctggttgtttgagaagtc---------cg +gccgtgactatatccctggccgccagctccagttctatgcacagtgtcggcgctggctctcggccggctttc +atctggacccaagagtgcttgtctttgatgagtctgcgcactgc---cgctgcaggagcttcgttaaaaa-- +----tgtcgctaggaaggtttgctgttttatgaagtggcttggccagga------gtgcacctgctttttgg +----------------aacctgcggagggcctccttggcgatcagggt--------catgataatgaggcct +atgaggggtctgaggtcgacccagccgagcccgccctccttgatatttcggggacttacaccgtccatgggc +ggatgttggcagacttatatagagccctaaatatcccgcacgatatcgcggcccgagccacccgcttgtcgg +ccactgttgagcttgtcgctggtccagggcggcttgagtgtcgcactattttgggtaataagactttccgta +ccacagttgttgacggcgcccagctcgaggcaaatggccc------------------------tgagcagt +atgttctctcatttgatgaagcccaccagtgtatgggtgccgggccgcacagcctcgcgtatgagctcaccc +ccggcgggctgcaggttaaaatctcgtct-------aatggtttggattgtacggcagtctttcct---ccc +ggaagggccccagatgcgggagctgcggaggtttcggccttctgtagtagtctgtatagatttaataagacc +attcagcggcactcgatcgtcggtgggctgtggttgcacccggaggggctgctgggtctttttccacctttc +gcccccggccacctctgggaatctgcaaatcccttctgcggtgagagcactctctataccagaacctggtct +acttccggcttctctagtgatttctcaccacttgaggcagccgctaatgcccctcttatcgctagt------ +-ctgccttgtacgccggccccctccgaggctggtgc-----------------cccagtttt---------- +---------gccgccgact---------------------------------------------tctgagtc +tcccg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------------ggcctagtaacttgcttc-- +-ccggcgcccccggg-------------------------------------ccttctgctcgtaagcctac +ggggcagcc--------------------------------------tttagtgcgtaaccgccgct----- +-------------------tgctccatacctatcctgatggtgcaaaggtttatgcagggtccctgtttgag +tcggactgcgactggttggtcaatgcgtctaaccctggccaccgccctggtggcggtctttgtcacgctttt +taccagcgcttccctcagtctt------tcgaccatactaagttcatcatgcgggatgg---gctcgcggca +tacactctgtcgcctcgcccgattatccacgcagttgcccctgattatagagttgtgcaaaatccaaaaagg +ctggaggcagcgtaccgtgagacatgttctcgtatcggtactgccgcctacccgctgctgggatctggcatc +tatcaggtgcctgtgggcccgagtttcgatgcctgggagcgtaatcaccggcccggcgacgaactttatctc +accgagcttgcgaccgct-------------------------------------------------tggtt +cgaggctaataggccggcccggtccttcatgccggccgcccctgacacggcccccgctgacggccccgcagt +cgtgactggctccccgccagaggccgccaacggcccggcacttcctaccctgaccataacagaggatgtagc +tc------------ggacggctaatcttgcactggagattg------------actccaggactgagctagg +ccgtgcttgc---gccggttgtgctgtcagccctggggttgtccgctatcaatttactgcgggtgttcctgg +gtccggcaaatcaaggtctatacagcagggtgatgttgatgtggtcgttgtgcctacccgcgagctccgtaa +cagctggcgccgtcgcgggtttgccgcatttacgccccactcggccgcccgtgttactggcggccggcgtgt +tgtgattgatgaggctccatcgcttccaccccatctgctcctattgcacatgcaacgagcctcatcagtgca +ccttttaggtgacccgaatcagatccctgctattgattttgagcatgccggccttattccagcaatccgccc +tgagctggctcccactagttggtggcatgttacgcaccgttgcccagcggatgtttgcgaactaatacgtgg +ggtgtaccccaagatccagactaccagccgcgtcttgaggtctttgttttggggcgac------cccccttc +aggccagaagctagtcttcacgcaggccgcgaaagctgccaaccctggcgcaattaccgtccatgaagcaca +gggcgctacatttacagaaaccactgttatcgcgacggctgatgctaggggcctcatccagtcgtctcgcgc +gcatgctgtcgttgcgctcacccggcacacagagaaatgtgtcattattgatgcgccggggttgctccgcga +ggtgggtatatcggatgttatagtcaataacttc------------------------------ttcctggc +cggtg--gcgagatcggccaccaccgcccctctgtcatacctcgcggtaatcccgaccggaaccttgatac- +-----cctccaggcttttcccccctcctgccagattagtgcctaccaccagctggccgaggagcttggccac +cggcctgcgcccgtggcagccgtcctgccgccctgccccgagcttgagcagggattattgtacatgccgcag +gagcttacagtatctgatagtgtcctggttttcgagctgactgacattgttcattgccgcatggctgcccct +agccagcggaaagccgtcctctcgacgcttgttggaaggtatgggcgtcgtacgaggctatatgaagctgcc +cactcagatgtgcgcgaatcgcttacaaggttcatccctgtcataggtcctgtgactgctacgacatgtgaa +ctctatgagctggtcgaggcaatggtggagaaaggtcaagacgggtcagctgtgcttgagctcgacctctgt +agtcgagatgtgtcccgtataacattctttcagaaggattgtaataagtttacaactggggagaccattgcc +cacggcaaagtgggccaggggatatcagcctggagtaagaccttttgcgctttatttggcccctggtttcgg +gccattgagaagcagttattaactctgctcccacccaatatattctatggtgatgcctatgaggactccgtg +ttttctgcggccgtcactggtgcggggtctagtatg---gtattcgagaatgacttctccgagtttgacagt +acccagaataacttctcact------------------tggtcttgagtgtgtgattatggaggaatgtggt +atgcctcagtggctggttagattataccacttggtccggtctgcctggattttacaggcccctaaggaatct +ctgaaagggttctggaagaagcactccggcgagcccggcacactgctttggaacactgtctggaatatggcg +gtcatagcccactgctatgagttccgtgattttaaggtcgccgcgtttaaaggggacgactcggtggtcctc +tgtagcgactaccgtcagagccgcttcgcggcggccctcattgcgggctgtgggctcaagctcaaagttgac +taccgccctattgggctttacgctggtgttgtggttgctcctggtcttggcacgctgcccgatgtcgtccgg +tttgccggtcgactgtcagaaaagaattggggccccagccctgaacgggccgagcagttgcgcctcgctgtc +tgtgatttcctgcgaaagttaacgaatgttgctcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggtgtgagtcctgggcttgtgcataaccttattggcatgttgcaaactattgccgatggcaaagcccatta +caccgagactgtgaagcctgtgctagatcttacaaattccattgtacagaggttggaatgaataacatgtta +c----------------tttgcaccgctcatggc------------accaccatgcgcactaggtttgttct +gttgctgctcttcgtatctctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagtcgactggcc------------gtcgtcgtgggcg-gcgcggcggcggttc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctattttcat---- +--------------ccaaccaaccccttcgccgttgacgttgacccacattccgggtctggaacccgctctc +gacagccaacccg---------------tccccttggcacctcatggcgtgatttgtccca----------- +------gcgcccccccgctaccccgcgtcgtcgaccagcccca---------gctggggctgcgccgttgac +tgctgtttctcctgcgcctgacacggcgcctgtcccggatgtcgactcacgtggcgctattttgcgtcgcca +gtataatctttctacctcgcctttgacttcaactgttgcttcgggcactaatctcgttttgtatgccgcacc +gcttaatcccctcttgcctctccaagatggcactaatactcacattatggcgactgaggcatctaattatgc +ccagtatcgggttgttcgagctacaatccgctatcgccctctagtgcccaatgctgttggtggttacgcaat +ttccatctcattttggcctcaaaccactactactcctacttctgttgatatgaattctatcacttcaactga +tgttaggatccttgttcaacctggtctggcctctgaacttgttataccgagtgagcgcctccattaccgcaa +tcaaggttggcgctctgtggagacctccggcgtggccgaggaggaggccacttccggacttgtcatgctctg +tattcacggctctcctgtgaactcatacactaataccccttatacgggtgctttagggcttcttgactttgc +gcttgagattgaatttcggaatttgactccaggcaacactaacacccgtgtttcccggtatactagtactgc +ccgccaccgtctgcgccgaggggccgatgggactgccgaacttacaactacggcggccacacggtttatgaa +agatcttcatttca---ccggaatgaac---ggggtcggtgagattggtcgtggcatagccctgacgctgtt +caacttagctgatacacttcttggtggtctgccgacagaattgatttcgtcggctgggggtcaggttttcta +ctcccgccccgtcgtctcagccaatggcgagccgaccgttaagttatacacatcggttgagaatgcacagca +ggacaaggggatcgcgataccgcacgatattgacctcggtgactctcgtgtcgttattcaggactatgataa +tcaacatgagcaagaccggcccaccccgtcaccggccccgtcccgtcccttttcggttctacgcgctaatga +cgtgttatggctttc-----------------------------acttactgctgctgagtatgac------ +caaactacatatggttcgtcaaccaaccctatgtatgtttcagacactgttacatttgt---taatgttgcg +acgggtgctcaagccgtcgcccgctcccttgattggtctaaagtcacccttgatgggcgccccctcactact +at-----tcagcagagttctaaagtattttatgtcc-tcccccttcgtggtaagctctccttctgggaggct +gggactactaag--gcgggttacccttataattataacaccactgctagtgatcagattttgattgagaacg +cggctgatcac------cgtgttgctgt-ctccacctacactactagtttggg--------------tgctg +gccctgtgtctatttc-tgcagttggtgtccttgccccgcactccgccttggctgttcttgaggatactatt +gatt---------accccgcccgtg----ctcatacttttgatgacttttgcccagagtgccgtgttc---t +cggcctgcagggctgtgcctttcaatc--------tactgttgctgagcttcagcgtct------------- +--------tagaatgaaggtaggcaaracccgg--------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444080.1/17149/1-7149 |Hepeviridae isolate HEPAC167, partial genome +--------------------------------tata-cgtata-------------tagacgggtcgaygc- +---catggaggcccatcagtttatcaaggctcctggcattactactgccattgag---caggctgctctggc +agcggctaactccgccttggcgaatgctgtggtggtccggccgttcctatcccgtgtgcaaactgacatcct +tattaacctgatgcaaccccggcagctcgtgtttcggcctgaagttttctggaaccacccgatccagcgggt +catacataacgagctagagcaata---ctgccgagctc-gcgctggccgctgccttgaggtgggtgctcacc +cgaggtccattaatgataatcctaatgtcctgcaccggtgcttccttcgtccagtcgggagagatgtccagc +gttggtattctgcccccactcgcggcccagcggctaactgccgtcgctccgcactacgtggtttgcctcctg +tcgaccgcacatactgcttcgacgggttctcccgctgtgctttcgccgctgagaccggaatcgccttatatt +cactgcatgacctctggccttcggacgttgcggaggccatggcccgtcatgggatgacgcgcttgtatgctg +tcctccaccta-ccccctgaggtcctactaccacctggtacttaccatacaacctcttacctcttgatccac +gacggtgatcgcgccgtcgtgacctatgagggggacactagtgcgggctacaaccacgacgtgtccatactc +cgtgcttggatccgcactactaaaatagttggtgaccacccactggtgatagagagggttcgcgctattggc +tgccattttgttctgctcctcactgcagcccctgagccgtctcctatgccttatgtcccgtaccctcgctca +acggaggtgtatgttaggtccatatttggccctggc---------gggtctccctctcttttcccatcggcc +t----------gttctactaaatcta-catttcatgctgtcccggtccacatatgggaccggcttatgcttt +ttggtgctaccttggacgatcaggccttttgctgctcgcggcttatgacctacctccgcgggatcagctata +aagtgaccgtcggcgcacttgttgccaatgagggctggaatgcctcggaggatgcgctcaccgctgtgatta +ctgcagcgtatttgactatctgccatcagcgctacctccgaactcaggctatttctaaaggcatgcgccggc +tagaggtcgagcacgcccaaaagtttattacaaggttatatagctggttatttgagaagtc---------ag +gccgcgactacattcctggtcgccagcttcagttctatgcacagtgccgccgttggctctcggctggtttcc +acctggatcccagagtccttgtttttgatgaggcggtcccctgc---cgctgccggagcttcttaaggaa-- +----ggctgccggcaaattctgctgctttatgaagtggttggggcagga------gtgcacttgttttctgg +----------------agccggcggagggcttggttggcgactgcggc--------catgacaacgaggcct +acgaggggtccgaggtggaccctgctgagccagcccacctcgatatctctgggacttatgcagttcatggcc +gccagcttgaggccctttatagggcgttaaatatcccacatgatattgcggctcgcgcgtcacgtttgacag +ctactgtggagcttgctgccagcccaggccgacttgagtgccgcacggtgctcggaaataagacctttcgta +catcaatagttgatggtgctcacctagaagccaatggccc------------------------cgagcagt +atgtcttgacatttgatgactctcgccaggcaatgggggccgggcctcatagccttacgtacgaacttgttc +ctaccggcctgcaggttaaaatatcttct-------aatggcctggactgtgccgcaatattcccc---cct +ggtggggcgccaagcgccgagccaggtgaggtggcggctttttgcagtgctctgtatagatacaataggttt +acccagcgccattcgctgactggcgggctgtggttgcacccagaggggctccttggtttatttcctcctttc +tcccctgggcacctctgggagtctgcgaaccccttttgcggcgagagtacactttacacccgaacttggtcc +acatctggtttctctagtgacttttccccccccgaggcggctaatgccgccccaacccctgatgt----ggg +actacccccgggtaccccctcatctgttagtgatgt-----------------ctgggtgct---------- +---------gccgccgcca----tctgaggggt--------------cggcgattgtcccgccacccgaaac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ccagtaagcctaccagtctgcctagt +cttgttacacctgga-------------------------------------ccccccgttcgtaagccgcc +tacaccacc--------------------------------------accgactcgcacccgccggc----- +-------------------tcctctacacctaccctgatggggccagggtgtatgcaggctctttgtttgag +tcggattgtgattggctggttaatgcatctaaccctggccaccgccctggcggtggcctctgtcacgcattt +taccagcgcttcccggagtcgt------tccatccggccgacttcgtcatgcgtgaggg---cctcgctgca +tacactttgaacccacgtccaatcatccatgccgtggcccccgactatagggttgagcagaaccccaagagg +ctagaggcagcgtaccgcgagacctgctctcgcctcggcacagctgcctacccgctgctggggtcagggatc +taccaggtccctgtgggcctaagttttgatgcctgggagcgtaatcatcgtcccggcgacgaactctacctt +actgagccagctgccgct-------------------------------------------------tggtt +tgaggctaacaagccagccca--------------------------------------------------- +------------------------------------------accagctctaacaattactgaggatactgc +cc------------gtacggccaaccttgcgctcgagattg------------attccgccactgaggtggg +tcgtgcctgt---gctggttgtactgtcaaccccggggttgttcattatcagttcactgccgggktccctgg +ctctgggaagtctaggtctatacagcagggggatgttgatgtcgtggttgtgccaacccgtgagctccgtaa +cagctggcggcgccgcggctttgccgcctttacaccgcacacggcagctcgtgttactgccggccggcgtgt +tgtcatagatgaggcaccttctctcccaccacacctgctgctgcttcatatgcagcgagcctcatcggtcca +ccttcttggtgaccctaatcagatccctgctattgactttgagcatgccggtctggtaccggcaatccgtcc +tgagcttgccccgactagctggtggcatgtcacccatcgctgccccgccgatgtgtgtgagctcatacgtgg +ggcttatccaaagatccagacgactagccgtgtgttacgatctttgttttggaatgag------cctgcagt +gggtcagaagttggtttttacgcaggctgccaaggcggctaaccccggtgcaatcactgtccatgaggctca +gggcgccacgtttacagagactaccattatagccacagccgatgctaggggtcttatccagtcctcccgcgc +acatgccatcgttgcgcttactcgccatacagagaaatgtgtcattttagacgcccccggcctattacgtga +agtcggcatatctgatataattgttaataatttc------------------------------tttctggc +tggtg--gcgaagtaggccaccaccgcccttctaccatacctcgtggcaacccagaccggaacttagatac- +-----tctacaagcgtttcctccatcctgccaaatcagtgcttaccaccagctggctgaggagcttggtcac +cggccggccccagtggccgccgttctgcccccctgccctgagctcgagcagggccttctctatatgccgcag +gagctcacagtttctgatagtgttttgatttttgaactcacggacatagtacactgccgtatggctgctccc +agtcaacgtaaggcagtcctttcaacgctcgtcggtagatacggccgtcgaacgaagctgtatgaagcagcc +cattctgatgtccgtgagtctttggggaggttcatccctactatcggaccagtccaggccaccacgtgtgag +ctatatgagttggttgaggccatggtggagaagggtcaggacggctccgccgtgcttgagcttgacctctgt +agccgcgatgtttcacggatcacattctttcagaaggactgtaataaattcacaactggtgagactattgcc +catggtaaagtaggtcagggcatttcggcctggagcaaaaccttctgtgccctatttggcccgtggttccgt +gccatcgagaaggagatcctggctctgctcccgcctaatattttctatggtgacgcttatgaggagtcagtg +ttctctgcagccatttccggtgcgggctccagtatg---gtctttgagaatgatttctctgagtttgatagc +acccagaataacttctccct------------------tggccttgagtgtgtcatcatggaagagtgtggc +atgccccaatggcttattcgactgtaccatttggttagatcagcttggactttacaggccccgaaagagtct +ttgaaaggcttttggaagaarcaytccggcgagcctggcactctcctctggaatactatctggaatatggcg +atcatagcgcactgctatgaattccgcgacttgagagtggcagcgtttaagggggatgattcggtggttctc +tgcagtgattaccgccagagtcgcaatgctgctaccctgatagccggttgtgggttgaaattgaaggttgat +tatcgccctataggcttgtatgccggcgttgtggtggctccgggcctcggggcactccctgatgtcgtccgg +ttcgccggccgactgtccgagaagaattggggcccgagccccgaacgcgccgaacagttgcgtctggcagtt +tgtgacttcctccgagggttaacgaatgttgcgcaggtctgtgtcgatgttgtatcccgtg-------ttta +tggggttagccccggattggtacataaccttattggcatgttacagactattgctgatgggaaggcccattt +tactgagactgtcaagcctgtattggatcttaccaactctattatacagaggttagaatgaataacatgtt- +c----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gttgttgctcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------accgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaacccggggttggagctcgccctc +gacagccggcccg---------------cccccttggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgccgccccccgccgtcgatctgcccca---------actggggctgcgccgttaac +tgctgtctcacctgcgcctgatacggccccagttcccgatgttgattctcgtggcgccattttgcgccgcca +gtataatttgtctacttcccccttaacttcatctgtcgcttcagggactaaccttgttctgtatgccgcccc +cctcaatcctcttttgcctcttcaagacggcactaatactcatattatggcaactgaggcgtccaactacgc +tcagtatcgagttgtccgagctacaattcgttaccgccctttggtgcctaatgccgtcggtggctacgcaat +ttctatctctttctggccccagaccacaactactcctacctctgtcgatatgaattctattacttctactga +tgttagaattttggtccagcctggcatagcctctgagctggtcatcccgagtgagcgccttcactaccgtaa +tcaaggttggcgctctgttgagacctcgggtgtggccgaggaggaggcaacgtcaggcctggttatgctctg +tatccatgggtcccctgttaattcctacactaatacaccctataccggggcattggggcttcttgattttgc +acttgaacttgaatttagaaatcttacccctgggaacactaacacccgtgtgtcccgttatactagtacggc +ccgacaccgtttgcgccgcggtgccgatggtaccgccgagcttacgaccaccgctgccacacgtttcatgaa +ggacctgcatttct---ccgggacgaat---ggagttggtgaggtgggccgtggtatagccctgacgctatt +caatcttgctgatacacttctcggcggtctgccgacagaattgatttcgtcggccggaggccaactatttta +ctcccgtccggttgtctcagccaatggcgagccgactgttaagttatacacctccgtcgagaatgcacagca +ggacaaaggtattgccataccacacgatatagacttaggagactcccgtgtggttattcaagactatgacaa +ccagcatgaacaggatcggcccactccctcgccggccccttctcgtcctttctcggtcctccgagccaacga +tgttttgtggctctc-----------------------------tttgactgcagctgagtatgat------ +cagaccacttatggctcgtccaccaaccccatgtatgtttcagatactgtcacacttgt---gaatgtagca +acaggtgcccaggctgttgcccgttccctcgactggtccaaggtcactttggatggccggcctcttaccact +at-----ccagcagtattctaaaacattctatgtgc-tgccgcttcgcggcaagctctccttttgggaggcc +ggtacgactaag--gccggctatccctataactataacaccactgctagtgaccagatcttaattgagaatg +cagccggccat------cgtgttgctat-atcaacctacaccactagtctcgg--------------tgctg +gccctgtatctgtttc-agcggttggcgttcttgctccgcactctgctttagctgtgcttgaggatactatt +gatt---------accccgcccgcg----ctcatacttttgatgatttctgccctgagtgccgtaacc---t +cggcctacagggctgtgctttccaatc--------cactattgctgagcttcagcgcct------------- +--------taaaatgaaggtaggcaaaacccgg--------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444081.1/17257/1-7257 |Hepeviridae isolate HEPAC114, complete genome +-------------------------------------cgtctg-------------a-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggtccggccgttcttatcccgtgttcaaactgaaatcct +tattaacctgatgcaacccagacagcttgtgtttcggcctgaagtcctctggaaccacccgattcagcgagt +catacacaatgagctagagcaata---ctgccgagccc-gcgctggccgttgtcttgaggtgggcgcccacc +caagatctattaatgacaaccctaatgttctgcaccggtgtttcctccgcccggttggaagagacgttcagc +gctggtattctgcccccacccgtggaccagcggctaactgtcgccgctctgcgctacgcggcttgccccctg +tcgatcgtacatattgtttcgatgggttctcccgctgcgcctttgccgctgagaccgggatcgctttatact +cgctgcatgacctctggccctcggacgttgcggaggctatggcccgccacgggatgacgcgcctgtatgccg +cccttcaccta-ccccctgaggttttgttaccacctggcacttaccacacaacctcttatcttttgattcac +gacggcaatcgtgccgtcgtgacctatgagggggatactagtgcgggttacaaccacgatgtgtctatactc +cgtgcatggattcgcaccactaaaatagtcggtgatcatccactggtgatagagagggtccgcgccatcggc +tgccattttgtcttacttcttactgcagcccccgaaccatccccaatgccttatgtcccgtaccctcgttca +acagaggtgtatgtcaggtccatatttggccctggt---------gggtctccttctctcttcccatcagcc +t----------gctctaccaaatcta-catttcatgctgtcccggtccatatctgggatcggcttatgcttt +ttggtgccaccttagatgaccaggccttttgctgctcccgacttatgacttatctccgtgggattagttata +aagtgaccgttggcgcgcttgtcgccaacgagggctggaatgcctcggaggatgcacttaccgccgtgatta +ctgcggcgtatttgactatctgtcaccagcgctacctacgaacacaggccatttctaaaggcatgcgccggt +tagaggttgagcacgcccagaagttcatcacaaggttatatagctggctgtttgaaaagtc---------ag +gccgtgattacatccccggccgccagctccagttttatgcgcagtgccgccgttggctctcggctggcttcc +atctggaccctagggttctcgtctttgatgaggcggtcccctgc---cgctgccggagcttcctaaagaa-- +----agttgccggaaaattttgttgcttcatgaagtggctggggcagga------gtgtacctgttttctgg +----------------aaccagtggaaggcctggttggtgactgcggc--------catgataacgaggcct +atgaggggtctgaggtggaccccgccgagcctgctcatcttgatgtttccgggacctatgcggtccacggcc +gtcagcttgaagctctatatagagcgcttaatatcccagatgacattgcggctcgtgcatcacgtctgacgg +ctactgtggaacttgctgccagcccaggccgactcgagtgccgtactgtgcttgggaataagattttccgca +catcaataactgatggtgctcatctcgaggccaacggccc------------------------tgagcagt +atgtcttaacatttgacgactctcgccaggcaatgggggctgggcctcacagcctcacgtatgaactagtcc +ctgctggtctgcaggttaaaatatcttct-------agtggcttggattgtaccgctgtattcccc---cct +ggtggggcgccaagcgccgcaccaggtgaagtggcggccttttgtagcgccctatacaggtacaataggttc +acccagcgccattcgctgacaggtgggctgtggttacaccctgaggggctcctcggcctctttccccctttc +tccccggggcatctctgggagtcagcaaaccccttctgcggtgagagcacactttacacacggacttggtct +acatctggtttctctagcgacttctccccacccgaggcggcctatgtcgctccggtccctgacat----aag +gccgccctcgggcaccccctcgtccgctagtgatat-----------------ctgggtgtt---------- +---------ttcaccgccc----tctgaggggt--------------cggcggtcgttccgtcacccgcaac +cccggttagtaagccaactaa---------------------------------------tccgcc------ +------------------------------------------------------------------------ +-cagtcttat-------------------------------------------------------------- +-------------tacatcc----aggtcccccgtccgtgagccgcctacaccaccgccggccctaaccctg +c---------------------------------------------ccagtgagccagctaacccgcctagc +ctcactacacctagg-------------------------------------ccctccgcccgcgagcctac +cacaccccc--------------------------------------aacggcccgcacccgtcggc----- +-------------------tcctttatacttatcccgatggggccaaggtgtatgcaggctctttgtttgag +tcagattgtgattggctggttaatgcatcgaaccctggccaccgccctggcggtggtctttgccatgcattt +taccagcgcttccctgagtcgt------tccacccgactgaatttgtcatgcgtgaagg---ccttgccgca +tacactttgagcccgcgtccgatcattcatgctgtggcccccgactacagggtcgagcagaaccccaagaga +ttagaggcggcatatcgtgagacttgctcccgccttggcacagctgcctacccgctactgggttcagggatt +tatcaagtccctgtgggtttaagcttcgacgcctgggagcgtaatcatcgcccaggtgatgaactttatctc +actgagccagctgcctcc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaatcactgaggacaccgc +cc------------gcacagccaaccttgcgcttgagattg------------actctgctactgaggtggg +tcgcgcttgc---gccggctgcactattaatcctgggattgttcactaccagtttaccgccggggttcctgg +ctctgggaagtctagrtcyatacagcagggggatgtygatgtcgtcgtcgtaccaactcgagagcttcgtaa +cagctggcgacgccgcggttttgctgcttttacaccccatacagcagctcgtgtcactgctggccggcgtgt +ggtgatagatgaggcaccttcgcttccaccgcacttgcttctgcttcatatgcagcgggcctcatcggttca +ccttctcggtgaccctaatcagattcctgccatcgactttgagcatgccggcttggtccctgcgattcgccc +tgagctagcccctactagttggtggcatgtcacccaccgctgccccgccgatgtgtgtgagctcatacgcgg +ggcttacccaaagattcagacgaccagccgtgtactaagatctttgttctggaatgag------cctgcggt +gggccagaggctggttttcacgcaggcagccaaggctgccaaccctggcgcaattaccgttcatgaggccca +gggagccacgttcactgagactaccatcatagccacggccgatgccaggggtcttattcaatcttctcgtgc +acatgctatcgttgcactcactcgccacacagaaaaatgtgtcatccttgacgctcctggcctactgcgtga +ggtcggcatttctgatataattgttaataacttc------------------------------ttcctggc +tggtg--gtgaagtgggccatcatcgcccctctattatacctcgcggcaacccagaccagaacttagacat- +-----cttacgagcatttccyccgtcttgtcaaattagtgcctaccaccagctggctgaggagctaggccat +cggccggccccagtggccgccgtcctacccccttgccctgagcttgagcaggggctactttacatgccacag +gagcttacggtctctgatagtgtcttaatttttgagctcacggacatagttcactgccgtatggctgcccct +agccaacgtaaggcggtcctttctacgctcgtcggcaggtacggccgccgaacaaagctgtatgaagcggcc +cattctgatgtccgcgagtctctaakgaggttcatccctactatcggaccggtgcaggccacaacatgcgag +ttatatgagctggttgaggccatggtggagaagggccaggatggttccgccgtgctcgagctcgacctctgt +agccgtgatgtctctcgtatcacatttttccagaaggattgtaacaaatttacaacaggtgagaccattgct +cacggcaaggtgggccagggcatctcggcttggagtaaaaccttctgtgctttatttggcccatggttccgc +gccattgagaaggagattttggctttactcccacccaacattttttatggtgatgcttatgaggagtcagtg +ttctctgcagccatttctggggctggctctagtatg---gtttttgagaacgatttttctgagtttgatagt +acccaaaacaattattcttt------------------aggccttgagtgcgttattatggaggagtgtggc +atgcctcagtggcttattcgtctataccatttagttagatcagcctggaccctgcaagccccgaaagagtct +ytgaaaggtttttggaagaagcattccggcgagcctggcaccctcctttggaacaccgtctggaacatggcg +atcatagcacattgctatgaattccgtgatttgaaagtggcagcgtttaagggrgatgattcagtggttctc +tgtaacgattatcgccagagccgcaatgcagccaccctgatagccggatgtgggttgaaattgaaggttgat +taccggcctataggtctgtatgctggcgttgtggtggctccgggccttggggcacttccagatgtcgtccgg +ttcgccggtcgattatctgagaagaactggggcccgggccccgagcgcgccgaacagttgcgcctagcagtt +tgtgacttccttcgaaggctracgaatgttgcgcaggtttgtgttgacgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacagactattgccgatgggaaggcccattt +tactgagactgtcaagcctgtgctggatcttacaaactctatcatacagaggttggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gctgctgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagtcgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaatccggggctggaactcgccctc +gacagccggcccg---------------tcccctcggttcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatytacccca---------actggggctgcgccgctaac +tgctgtttcaccggcgcctgacacggccccagttcctgatgttgactctcgtggcgctattttgcgccgtca +atataatttgtccacctctcctctaacctcatctgttgcctctggaactaatcttgtcttgtatgccgcccc +gcttaatcctcttctgcctctccaagacggcactaatacccacatcatggcgactgaggcgtctaattacgc +tcagtatcgggtcgtccgggctacaatacgctatcgtcctttggtgccgaatgccgtcggtggttatgcaat +ttctatctccttctggccccagactacaactacacccacctctgttgatatgaactctatcacttccacaga +tgttaggatcctggtccagcctggcatagcctctgagttggttatcccgagtgagcgccttcactatcgcaa +tcagggctggcgttctgttgagacatcaggtgtggccgaggaggaggcgacgtcaggtttggtcatgctttg +tattcatggttcccctgttaattcctataccaatacgccctataccggggcgttggggctcctcgactttgc +acttgagcttgaatttagaaatctgacccctgggaacactaacacccgtgtgtcccgttacaccagtacagc +ccggcaccgtttgcgccgtggtgccgatgggacggctgagcttacaaccactgcagccacacgttttatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggcgaggtgggccgtggtatagctctaacgctatt +taatcttgctgatacacttctcggcgggytgccgacagaattgatttcgtcggctggaggtcaactgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgtcaaattatacacctctgtcgagaatgcacagca +ggacaagggtattgctataccacacgatatagacctaggggattcccgtgtggtcatacaagactatgataa +ccaacatgaacaagatcggcctactccatcgccagccccgtcccgccccttttcagtccttcgagccaatga +tgtcctatggctctc-----------------------------cttgactgcagctgaatatgac------ +cagactacttatggctcgtcgaccaaccctatgtatgtctcagacactgttacacttgt---taatgtggcg +acgggtgcccaggctgttgcccgatcccttgattggtctaaggtcactttagacggccggccacttactacc +at-----ccagcagtactctaagacattttatgtgc-tgccgcttcgtggcaagctttccttttgggaggct +ggtaccactaag--gctggctacccttacaattataacactactgctagtgaccagattctgatcgagaatg +cagccggtcac------cgtgttgccat-atccacttatactactagccttgg--------------cgccg +gccccgtgtctgtttc-cgcggtcggcgttcttgctccgcactctgctttagctgtgcttgaagatactatt +gact---------accctgcccgtg----cacatacttttgatgatttctgccctgagtgccgtaatc---t +cggcttgcagggctgtgctttccagtc--------taccattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-cc---ctt------gt +gccc-cc----------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444082.1/17268/1-7268 |Hepeviridae isolate HEPAC65, complete genome +---cacgatag----------tcgcta--------------tg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatcccgtgttcagactgagatcct +tattaacctgatgcaaccccgtcagcttgtgttccggcctgaagtcctctggaatcatccgatccagcgagt +tatacataatgagctggaacaata---ctgccgtgccc-gcgctggccgctgtcttgaggtgggcgctcacc +caaggtctattaatgataaccctaatgttctgcaccggtgcttcctccgcccggttggaagagacgtccagc +gctggtattctgcccccactcgtggtccagcggctaactgccgccgctctgcgctacgcggtttgccccctg +ttgatcgtacatactgcttcgacgggttttcccgctgcacctttgccgctgagaccgggatcgctctatact +cactgcatgacctttggccctcggatgttgcggaggctatggcccgccacgggatgacgcgcttgtatgctg +ccctccaccta-ccccctgaggttctgttaccacctggcacataccacacaacctcctatcttctgatccac +gacggtaatcgtgccgtcgtgacttacgagggggatactagtgcgggttataaccacgatgtgtctatactt +cgtgcatggatccgcactactaaaatagttggtgatcatcctctggtgatagagagggtccgtgccatcggc +tgtcattttgttttactccttactgcagcccccgagccatccccaatgccttatgtcccgtaccctcgctca +acagaggtgtatgtcagatctatattcggccccggt---------gggtcgccctctcttttcccatcagcc +t----------gctctaccaagtcta-cattccatgctgtcccggttcatatctgggaccggcttatgcttt +ttggtgccaccttagatgatcaggccttttgctgctcgcggcttatgacctatcttcgcgggattagttata +aagtgaccgttggcgcacttgttgccaacgagggctggaacgcctcagaggatgcgcttaccgctgtgatta +ctgcagcgtacttgactatctgccatcagcgctacctacgaacacaggccatttctaaaggcatgcgccggc +tagaggttgagcatgcccaaaaatttatcacaaggctatatagctggctgtttgaaaagtc---------ag +gccgtgattacatccccggccgccagcttcagttttacgcgcagtgccgccgctggctctcggctggcttcc +atttggaccctagggttctcgtcttcgatgaggcggtcccctgc---cgttgccggagttttctaaagaa-- +----ggttgccggaaaattctgttgttttatgaaatggctggggcagga------gtgcacttgctttctgg +----------------agccggcggagggcctggtcggtgactgtggc--------catgataacgaggctt +atgaggggtctgaggtggaccccgctgagcctgctcaccttgatgtttccgggacttatgcagtccacggcc +gtcagcttgaggctctatatagagcacttaacatcccagatgacattgcggctcgtgcatcatgtctgacgg +ctactgtggaacttgccgccagcccaggccgactcgagtgccgcactgtgcttgggaacaagatttttcgca +catcaataactgatggtgcccacctcgaggccaacggtcc------------------------cgaacagt +atgttctgacatttgatgactctcgccaggtaatgggggctgggccccacagccttacgtatgaacttgtcc +ctgctggcctgcaggtcaaaatctcttct-------aatggcttggattgtaccgctatatttccc---cct +ggcggggcgccaagcgctgcacctggtgaagtagctgccttctgtagcgccctatataggtacaataggttc +acccagcgccattcgctgaccggcgggttgtggctgcaccctgaggggctccttggcctgttcccccccttt +tcccctgggcatctttgggagtctgcaaaccccttttgcggtgagagtacgctttatacacgaacttggtcc +acatctggtttttctagcgacttctccccacccgaggcggcttatgccacctcagcccctgacat----agg +gttaccctcgggtgccccttcgactgctagtgatat-----------------ctgggtgct---------- +---------tccaccgccc----tctgagaggc--------------cggcggtcgtttcgccacccgtaac +cccggtcagtaagtcaactaa---------------------------------------cccgcc------ +------------------------------------------------------------------------ +-tagtcttac-------------------------------------------------------------- +-------------tacacct----aggccccccgtccgtgagccgcccacaccatcaccagccctaacctca +g---------------------------------------------tcagtgagccggctaacccgtctaga +cttactacacctgtg-------------------------------------tctcccatccgtgggccacc +cacaccatc--------------------------------------accggcccgcactcgccggc----- +-------------------tcctttatacatattccgatggggccaaggtgtttgcaggctctttatttgag +tcagattgtgattggctggttaatgcgtctaaccctggccatcgtcctggtggcggcctctgtcatgcattt +tatcagcgcttcccggagtcgt------tccatccgactgattttgtcatgcgtgaagg---tctcgccgca +tacactttgagcccacgtccgatcattcatgctgtggcacccgactacagggtcgagcagaaccccaagagg +ctagaggcggcataccgtgagacctgctctcgcctcggtacagctgcctacccgctgctggggtcagggatt +taccaggtccctgtaggcttaagtttcgacgcctgggagcgtaaccaccgcccaggcgacgaactttacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------accagccctaacaattactgaggacactgc +cc------------gcacggccaaccttgcgcttgagattg------------actccgctactgaggtggg +tcgtgcttgc---gccggctgcactattaaccccgggattgttcattaccagttcaccgctggggttcctgg +ctccgggaagtctaggtctatacagcagggggatgttgatgttgtggtcgtgccaacccgtgagcttcgcaa +cagttggcgacgccgcggctttgctgcttttacaccccacacagcagctcgtgtcactgccggtcggcgtgt +ggtgatagatgaggcgccttcacttccaccgcacttgctattgctccatatgcagcgagcctcatcggtcca +tcttcttggtgaccccaatcagatccctgccattgactttgagcacgccggtttggtcccagcgatccgccc +tgagctagcccctactagctggtggcatgtcacccaccgctgccccgccgatgtgtgtgagctcatacgcgg +ggcttacccaaagattcagacaaccagccgtgtgctgagatctttattttggaacgag------cctgcggt +tggtcagaggttggttttcacgcaggcagccaaggcggccaaccctggcgcaatcaccgttcatgaggccca +gggcgccacgtttactgagaccaccatcatagctaccgccgatgctagaggtcttattcaatcctcccgtgc +acatgccatcgttgcacttactcgtcacacagaaaaatgcgtcattcttgacgctcctggcctattgcgtga +ggtcggcatttctgatataattgttaataacttt------------------------------ttcctggc +tggtg--gtgaggtgggccaccatcgaccttctattataccccgcggcaacccagaccagaacttagacac- +-----cctacgggcattccccccgtcctgccaaattagtgcttaccaccagttggccgaggagctaggccac +cggccggccccagtggccgctgtcctgcccccctgccctgagcttgagcaggggttactctacatgccgcag +gagctcacggtgtccgacagtgttctaacttttgaacttacggatatagttcattgtcgtatggctgccccc +agtcaacgtaaggcggtcctttctacgctcgtcggcaggtatggccgccgaacgaggctgtatgaagcagcc +cattctgatgttcgagagtctttaggcaggttcatccctactatcggaccggtccaggccaccacatgcgag +ctgtatgagctggttgaggccatggtggagaagggccaggacggctccgccgtgcttgagcttgacctctgc +agccgtgatgtctcgcgtattacattcttccagaaggattgtaataaatttacaacaggtgagaccattgcc +cacggcaaagtgggccagggcatttcggcttggagtaaaaccttctgtgccttattcggcccgtggttccgt +gccatcgagaaggagattctggctctgctcccacccaacattttctatggtgatgcctatgaggagtcagtg +ttttctgcagccatctctggggccggctccagtatg---gtttttgaaaatgatttctctgagtttgatagt +actcaaaataatttttccct------------------tagccttgagtgtgtcattatggaggagtgtggt +atgccccagtggcttatccgactgtaccatctagttaggtcagcctggaccctgcaagccccgaaagagtct +ctgaaaggtttctggaagaagcactccggcgagcctggcaccctcctttggaacaccgtctggaacatggca +attatagcacattgctatgaattccgtgacttgagagtggcagcgttcaaaggggatgactcagtggttctt +tgtagtgattaccgccagagccgcaatgcagctactctgatagccggttgcggattgaaattgaaggttgat +tatcggcctataggcttgtatgccggcgttgtagtggctccgggcctcggggcacttcctgatgttgtccgg +tttgccggtcgactatctgagaagaactggggcccgagccccgagcgcgccgaacagttgcgcttagcagtt +tgtgatttccttagagggttgacgaatgttgcgcaggtttgcgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctgcagactattgctgatgggaaggcccattt +taccgagactgtcaagcctgtgctggatcttacaaattctatcatacagaggttggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgtttt +gctgctgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcagtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaatccggggctggagctcgccctc +gacagccggcccg---------------cccccttggctcgtcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgccgtcgatctacccca---------actggggctgcgccgttaac +tgctgtttcaccagcgcctgatacggccccagtccctgatgttgattctcgcggcgctatcttgcgccgtca +gtataatctgtccacctcacctctaacttcatctgttgcttctggaaccaatcttgtcctgtatgccgcccc +tcttaatcctcttttgcctcttcaagacggcaccaatactcacatcatggcgactgaggcgtctaattacgc +tcagtaccgggttgtccgggccacaatccgctatcgccctttggtgccgaatgccgtcggtggttatgcaat +ttctatttccttctggcctcagactacaactacacccacctctgtcgatatgaactctattacttccactga +cgttaggattttagtccagcctggcatagcttctgagttggtcatcccgagtgagcgcctccactatcgtaa +ccaaggctggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggcctggtcatgctttg +tattcatggttctcctgttaattcctataccaacacgccctataccggggcattggggcttcttgattttgc +actcgagcttgaatttaggaatctgacccctgggaacactaacacccgtgtctcccgttataccagtacagc +ccggcaccgtttgcgtcgtggtgccgatgggacggctgagctcacaactactgcagccacacgttttatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggtgaggtgggccgtggtatagccctaacgctatt +taatcttgctgatactcttctcggcgggttgccgacagaattgatttcgtcggctggaggtcaactgttcta +ctcccgtccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggcattgccataccacacgatatagatttaggggattcccgtgtggttatacaggactatgacaa +tcaacatgaacaggaccggcctaccccgtcgccggccccgtcccgtcctttttcagtccttcgagccaatga +tgtcctgtggctctc-----------------------------tttgactgcggctgaatatgac------ +cagaccacttatggctcgtcgaccaaccccatgtatgtctcagacactgtcacatttgt---taatgtggcg +acaggtgcccaggctgttgcccgatcccttgattggtccaaggtcactttggacggccggccactcactacc +at-----ccagcagtactccaagacattttatgtgc-tgccgcttcgtggcaagctttccttttgggaggct +ggtacgactaag--gctggctacccctacaattataacactactgctagcgaccagattctgatcgagaacg +cagccggccac------cgtgttgccat-atccacctacaccactagtcttgg--------------tgccg +gccctgtgtctgtttc-tgcggtcggcgttcttgctccgcactctgctttagctgcgcttgaggatactatc +gatt---------atcccgcccgtg----cccacacttttgatgatttctgccctgagtgccgtaatc---t +cggcctgcagggctgtgcctttcagtc--------tactatagctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagttctaaataa-tt----tc-cctc-ctt------gt +gccc-c------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444084.1/17266/1-7266 |Hepeviridae isolate HEPAC74, complete genome +------------------cacacgcg-----cgtgc-tcgatg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggttcggccgtttttatcccgtattcagactgatatcct +tattaacctgatgcaaccccggcagcttgttttccggcctgaagttctctggaatcacccgattcagcgggt +catacacaatgagctggagcaata---ctgccgagccc-gcgctggccgctgccttgagattggcgcccacc +ctagatccatcaatgataaccccaatgttctacaccggtgctttctccgcccggtcggaagagacgtccagc +gctggtattctgcccccactcgtggcccagcggctaactgtcgccgctctgcgctacgcggtttgccccctg +tagatcgcacatattgcttcgatgggttctcccgctgcgcctttgccgctgagaccgggattgctttatact +cactacatgacctttggcccgcggacgttgcggaggccatggctcgtcacgggatgacgcgtttgtatgctg +ccctccacctc-cctcctgaggttctgctaccacctggcacttaccacacgacctcttatcttttgattcac +gacgggaaccgcgccgtcgtgacttatgagggtgatactagtgcgggctataaccacgatgtatccatactt +cgtgcatggatccgcaccactaaaatagttggtgatcacccactggtaatagagagggtccgtgccatcggc +tgccattttgtcttactccttactgcagcccccgagccatccccaatgccttatgttccgtaccctcgttcg +acagaggtgtatgttagatccatattcggtcctggt---------gggtcgccttccctcttcccgtcagcc +t----------gctctaccaagtcta-cattccatgctgttccggtccatatttgggaccggcttatgcttt +ttggtgccaccttagacgaccaggccttttgctgctcgcggcttatgacttatctccgcgggattagttaca +aagtgactgttggcgcacttgtcgccaacgaaggctggaatgcctcggaggatgcgcttaccgctgtgatta +ctgcagcgtatctgactatctgtcatcagcgctacctacgaacacaggccatttccaaaggcatgcgtaggc +tggagattgagcatgcccaaaagtttattacaaggttatatagttggctgtttgaaaaatc---------ag +gccgtgactatatccccggtcgccagctccagttttatgcgcagtgccgccgttggctctcggccggctttc +atctggaccctagagttctcgtctttgacgagtcggtcccctgt---cgctgccggagcttcttaaagaa-- +----ggttgccggaaaattttgttgttttatgaaatggttggggcagga------gtgcacctgtttcttgg +----------------agccagcggaaggcctggttggcgactgcggc--------catgataacgaggcct +atgagggatctgaggtggacctcgccgagcctgcccatcttgatgtctccgggacctatgcggtccacggcc +gtcagcttgaggctctatatagagcacttaacgtcccggacgacattgtggctcgtgcgtcacgtctgacgg +ctactgtagaacttgccgccagcccaggccgactcgagtgccggacggtgcttgggaataagacttttcgca +catcaataactgacggtgcccatctcgaagccaacggtcc------------------------cgagcagt +acgttttgacatttgacgactctcgccaggctatgggggctgggccacacagcctcgcgtatgagcttgtcc +cagccggtttgcaagttaagatatcttct-------aacggcctggattgtaccgctatattcccc---cct +ggtggggcgccaagcgcagcaccaggtgaagtggcggccttctgtagcgctctatacaggtacaataggttc +acccagcgccattcgttgaccggtgggctgtggctgcaccctgaggggcttcttggcctgttccctcctttc +tccccggggcacctttgggagtctgcaaaccccttttgcggtgagagtacactctacacacgaacttggtct +acatcagggttttctagcgatttctccccacctgaggcggcctatgccgcctcagcacccgacat----ggg +gctaccctcgggtgctccttcgtctgctagtgatat-----------------ctgggtatt---------- +---------tccaccaccc----tctgagaggt--------------cggcgatcgccccgccacccgtgac +accggctagaaaaccagttaa---------------------------------------cccacc------ +------------------------------------------------------------------------ +-aagtcctat-------------------------------------------------------------- +-------------tacacct----aggtgccctgcccgtgagccacctacaccaccatcggctccaaccccg +g---------------------------------------------tcaataacccagctagcctgtctagc +cttactacacacagg-------------------------------------cctcctgtttgtaagccgcc +tacaccgcc--------------------------------------accggctcgcactcgccggc----- +-------------------ttctttatgcatatcctgatggggccaaggtgtatgcaggctccctgtttgag +tcagattgtgattggctggttaatgcatctaaccctggccaccgtcctggcggcggtctttgccatgcattt +taccagcgtttcccggagtcgt------tccatccgactgattttgtcatgcgcgaagg---tctcgccgca +tatactctgagcccgcgcccgatcattcacgcagtggcccccgattatagggttgagcagaaccccaagagg +ttggaggcggcatatcgtgagacctgctctcgtctcggtacagctgcttatcctctactggggtcagggatt +taccaggtccctgtgagtttaagttttgacgcctgggagcgtaaccaccgcccaggcgatgaactgtacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacaccgc +cc------------gcacagctaaccttgcacttgagattg------------actctgctactgaggtggg +ccgtgcttgc---gccggctgcactattaaccccgggatcgtccgctaccagtttaccgccggggtccctgg +ctctgggaagtctagatcyatacagcagggggatgttgatgttgtggtcgtgccgactcgtgagcttcgtaa +cagttggcgacgccgtggctttgctgcttttacacctcacacagcagctcgtgttactgccggtcggcgcgt +ggtgatagatgaggcaccttcgcttccaccgcacctgctgctgctccatatgcagcgagcctcatcagtcca +cctcctcggtgaccctaaccagatccctgccattgactttgagcacgccggtctggtcccagcgattcgccc +tgagctagccccaactagctggtggcatgtcactcaccgttgccccgccgatgtatgtgagctcatacgcgg +ggcctaccccaagatccagacgaccagccgtgtgttgaggtctttattttggaacgag------cctgcagt +aggtcagaggttggttttcacgcaggcagccaaagcggctaaccccggcgcaatcaccgtccatgaggccca +aggtgctacgttcactgagactactatcatagccacagccgatgctagaggtcttattcaatcttcccgcgc +acatgccatcgttgcgcttactcgccacactgaaaaatgcgtcattctcgacgccccaggcctgctgcgtga +ggtcggtatctctgatataattgttaataatttt------------------------------ttcctggc +tggtg--gcgaagtgggccaccatcgcccctctactataccgcgcggcaacccagaccaaaacttagacac- +-----cctacgggcgttccccccgtcctgccaaattagtgcctaccaccaattggccgaggagttgggccac +cggccggcccctgtggccgccgtcttgcctccttgccctgagcttgagcaggggctactttacatgccgcag +gagcttacggtgtccgatagcgtcctaatttttgaactcacggacatagttcactgccgtatggccgcccct +agtcagcgcaaggcggtcctttctacgctcgtcggcaggtatggccgccggacgaagctttatgaagcagcc +cattctgatgttcgtgagtctctaggaaggttcatccctactatcggcccggtccaggccaccacatgtgag +ttatatgagctggttgaggctatggtggagaagggccaggacggctccgccgtgcttgagctcgacctctgc +agccgtgatgtctcgcgtattacatttttccagaaggattgtaataaatttacaacaggtgagaccattgcc +catggtaaggtgggccagggcatttcggcttggagtaagactttttgtgctttattcggcccgtggttccgt +gccattgagaaggrgatcctggctctgctcccacccaatgttttttacggcgatgcctatgaggagtcagtg +ttttctgcagccatttctggggctggctccagtatg---gtttttgagaacgatttttccgagtttgatagt +acccaaaacaatttctctct------------------tggccttgagtgcgtcatcatggaggagtgtggc +atgcctcagtggcttattcgactgtatcatttagttagatcagcctggaccctgcaagccccgaaagagtct +ttgaaaggtttctggaagaagcattccggcgagcctggcaccctcctttggaataccgtttggaatatggcg +atcatagcacattgctatgaatttcgtgatttgagggtggcagcgtttaagggggatgattcagtggttctt +tgcagtgattaccgtcagagccgcaatgcggccaccctgatagccggctgtgggttgaaattgaaggttgac +taccggcctataggtctgtatgccggcgttgtagtggctccaggcctcggggcactccctgatgttgtccgg +ttcgccggtcgattgtctgagaagaactggggcccgggccccgagcgagccgaacagttgcgcctagcagtt +tgtgatttcctccgagggttaacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacagactattgctgacggaaaggcccactt +tactgagactgtcaaacctgtgctggatcttacaaattctatcatacagaggttggaatgaataacatgtt- +c----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggtc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcttatcacaacccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcctggcgcgatcagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctacccca---------gctggggctgcgccgttaac +tgctgtttcaccagcgcctgacacggccccggtccccgatgttgactctcgtggtgccatcttacgccgcca +gtataatttgtccacctcccctttaacttcatctgttgcatctggaaccaatcttgtcttatatgccgcccc +gcttaatccccttctgcctctccaggacggcaccaatactcacatcatggcgactgaagcgtctaattacgc +tcagtatcgggttgttcgggctacaatccgttaccgccctctggtgccgaatgccgttggtggttatgcaat +ttctatttccttctggcctcagactacaactacacccacctctgttgatatgaactccattacttccactga +tgttaggatcttggtccagcccggtatagcttctgagctggtcatccctagcgagcgcctccactaccgtaa +tcaaggctggcgctctgttgagacatcaggtgtggccgaggaagaggcgacatcaggcctggtcatgctttg +tattcatggttcccctgttaattcctacaccaacacgccctacactggggcattagggctcctcgactttgc +actcgagcttgagtttagaaatctgacccctgggaacactaacacccgagtgtcccgatatactagtacagc +ccggcaccgtttgcgtcgcggtgccgatgggacagctgagcttacaactactgcagccacacgttttatgaa +agacttgcatttca---ctgggacaaat---ggtgtaggtgaggtgggccgcggtatagctctaacgctatt +taatcttgctgatacacttctcggcgggttgccgacagaattgatttcgtcggctggaggtcaactgttcta +ctcccgcccggttgtctcagccaatggcgagccaactgtaaagttatacacctctgtcgagaatgcacagca +ggacaagggcattgctataccacatgatatagacttaggggattcccgcgtggttatacaagattatgacaa +ccaacatgagcaggaccgacccaccccctcaccggccccgtcccgccccttctcagtccttcgagccaatga +tgtcctgtggctctc-----------------------------tctgactgcggctgagtatgat------ +cagaccacctatggctcgtccaccaaccccatgtatgtttcagatacagttacatttgt---taatgtggcg +actggtgcccaggccgttgcccgatcccttgactggtccaaggtcactttggatggtcggccacttactacc +at-----ccagcagtactccaagacattttatgtac-tgccgcttcgtggcaagctttccttttgggaggct +ggtacgactaag--gctggctacccttataattataacactactgctagtgaccaggttctgatcgagaatg +cagccggtcac------cgtgttgccat-atctacttatactactagtcttgg--------------cgccg +gccctgtgtctgtttc-tgcggtcggcgttcttgccccgcactctgctttagctgtgcttgaagatactatt +gact---------atcctgctcgtg----ctcatacttttgatgatttttgccctgagtgccgtaatc---t +cggcctgcagggctgtgctttccagtc--------tactgttgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-cccccttt------g- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444085.1/17275/1-7275 |Hepeviridae isolate HEPAC83, complete genome +--------------------------------------gtatg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagttggtttttcgacctgaagtgctctggaatcatcctatccaacgggt +tatccataatgaacttgaacagta---ctgtcgggccc-gggctggtcgttgtctagaggttggggcccacc +caagatccattaatgacaacccaaatgttttgcaccggtgcttcctacgaccagttgggagagatgttcagc +gctggtactctgctcctacccgcggccctgcggctaactgccgccgttctgccttgcgtggcctcccccccg +ttgatcgcacctattgttttgatggattctcccgctgctcatttgccgcagaaactggggttgccctctatt +ccctgcatgacctctggccggccgatgttgcggaggctatggcccgacacgggatgacacgcttgtatgctg +cactacatctc-ccccctgaagtactactaccacccggtacttaccatacaacttcataccttctgattcac +gacggtgatcgtgctgttgtgacctatgaaggtgatactagtgcaggctacaaccatgacgtctccatactt +cgtgcatggatccgcacaaccaagataaccggcgaccatccgctggtgatagagcgtgtgcgggctattggc +tgccattttgtgctgctgcttactgcagcccctgagccgtcaccaatgccttatgtcccatatccccggtcg +acagaggtgtatgtccgctctatattcggtcctggc---------gggtccccatccctattcccatcagct +t----------gctccacgaaatcta-cattccacgctgtcccggttcatatttgggaccggctcatgcttt +ttggcgctactctggatgatcaggcgttttgctgttcacggcttatgacctacctccgcgggattagttaca +aggtcactgttggcgcccttgtcgctaatgaggggtggaatgcttcggaggacgctcttaccgctgttatta +ctgcagcgtatttgaccatctgccatcagcgttacctccgtactcaagctatatccaagggtatgcgccgac +tggaggttgagcatgcccaaaaattcatcacaagactttatagttggctgttcgagaagtc---------cg +gccgtgactatatccccggccgccagctccagttctatgcacagtgccgccgttggttatcggcgggtttcc +atcttgacccaagggtgcttgtttttgatgagtctgtgccctgc---cgttgtaggacatttcttaagaa-- +----ggctgtgggcaagttctgttgttttatgaagtggttgggacagga------gtgcacctgctttttgg +----------------agccagcagagggtctagttggcgaccatggc--------cacgataatgaagcct +atgagggctctgaggtcgatcaggccgagcccgcccatctcgatgtttctgggacctatgccgtccacggcc +gccaacttgaggccctgtatagggcgcttaacatcccgcatgacatcgctgcccgagcctcccgtctgactg +ccaccgtcgaacttgttgcaggtccagaccgcttggagtgccgcactgtgctcgggaataagactttccgga +cgacggtggttgatggcgcccatcttgaggcgaacggccc------------------------tgagcagt +acgttctttcgtttgacgcctctcgccagtctatgggggccgggccgcatagtctcacctacgagctcactc +ctgccggtttgcagatcaagatttcatct-------aatggcctggattgcactgcaacattcccc---ccg +ggtggggcccctagcgctgctccgggggaggtagcagccttttgcagtgccctttacagatacaacaggttc +actcagcgtcattcgcttataggtggcttgtggctgcaccctgaggggttgttgggtatcttcccccctttc +tctcccgggcacctttgggagtccgctaaccctttttgtggggagggaaccttgtacacccggacatggtca +acatctggtttttctagtgacttttccccccctgaggcagccgtcgtagcgccggctgctactcc----ggg +gttacgcc---gccctacacctcctgctagtgacat-----------------ttgggtgtt---------- +---------accgccacct----tctgaagaac--------------ttcaggttgacacagcgcccgctcc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcctgctcaaccatctagc +cccgctgggccaaag-------------------------------------gctcccgtgcgtaagccgcc +aacgccacc--------------------------------------atccccgcgcacccgccgcc----- +-------------------ttctttacacctatccggatggggcaaaggtgtatgcggggtcattgtttgag +tctgactgtgattggctggttaatgcgtcgaatcccggccatcgtcctggcggcggcctttgccatgccttc +taccaacgctaccccgagtctt------tccacccgactgagttcattatgcgcgacgg---tcttgccgcg +tatactttaaccccccggcctattattcatgcagtggcccctgattatagggttgagcataacccaaagagg +cttgaggcagcataccgagagacttgctctcgccgcggtactgccgcctacccactccttggctcgggcata +taccaagtccccgtcagcctcagctttgacgcttgggagcgtaatcatcgccccggggacgagctctactta +accgaccttgccgctacc-------------------------------------------------tggtt +cgaagctaataagccaacaca--------------------------------------------------- +------------------------------------------gccggcccttacaataactgaggatgcagc +cc------------gcacagccaacttagcactggagatcg------------atgctgctacggaggtcgg +ccgggcttgt---gccggctgtgcagttagtcctggggttgtgcactatcagtttactgctggggtcccagg +ttcggggaagtcgcgttctatacagcagggggatgttgacgtagtggttgttcccactcgggagctccggaa +tagttggcgtcgccggggtttcgcagcttttacacctcatacggcggcccgtgtcaccacaggccgtcgtgt +tgtgattgatgaggccccatccctcccaccgcatttgttgctactacacatgcagcgggcctcgtcggttca +ccttcttggtgacccaaaccagatccctgctatagacttcgagcacgccggcctggtccccgcaatacgccc +tgagcttgcgcccaccagttggtggcatgtcacccaccgctgccccgctgacgtgtgcgagcttatccgtgg +ggcttatcccaaaatccaaaccactagccgtgtgctgcggtctttattctggaatgag------cctgccat +cggccagaagttagttttcacccaggctgcaaaggccgctaaccccggtgcgatcacagtccacgaggctca +gggcgccactttcacggaaactacaattatagccacagctgatgccagggggctcatccaatcttcccgagc +acatgccatagttgcacttacccgccacacagagaagtgcgttattcttgacgcccccggcttgttacgtga +ggttggtatatcggatgtgattgtcaacaatttt------------------------------ttccttgc +cggcg--gggaggtgggtcaccatcgcccctctgtgatacctcgcggtaatcctgaccagaatctcgcgac- +-----actacaggccttcccaccctcttgccagattagtgcctaccaccagttagctgaggaactcggccac +cgtccagctcccgtcgccgctgtcttgcccccttgccctgaacttgagcaaggcttattatatatgccacag +gagcttacggtgtctgatagcgtgctggtctttgaactcacggatatagtccactgccggatggctgcccct +agccagcggaaggccgtcctatcgacgctcgtgggtaggtacggccgtcggacgaagctgtatgaagcagcc +cactctgacgtccgtgagtccctggctagatttatccccaccattgggcccgttcaggctactacgtgtgag +ttatatgagctagttgaggccatggtggagaaaggtcaggatggctctgccgtgcttgagctcgacctctgc +aatcgtgatgtatcgcgtatcacatttttccagaaagactgtaataaattcaccacaggggagaccattgcc +cacggtaaagtcggccagggcatctcggcctggagtaagaccttctgtgccctgtttggtccgtggtttcgt +gctattgaaaaagaaatactagccctgctcccgcctaatatcttctacggcgacgcatacgaagaatctgtg +tttgccgccgctgtgtcaggggcaggttcaagcatg---gtatttgagaatgatttctcagagtttgatagc +acccaaaataacttctccct------------------tggcctcgagtgtgtagttatggaggaatgtggc +atgccccagtggctaatccggttgtaccatttggttcggtcggcctggatcctacaggcaccgaaggagtct +ctcaagggattttggaagaagcattctggygagcccggcaccctcctctggaacactgtttggaatatggcg +atcatagcacactgctatgaatttcgtgattttaaggtcgccgctttcaagggggatgactccgtggtcctc +tgtagcgactaccgtcagagccgcaatgcagcggccctgattgcaggttgcgggctcaaactgaaggttgat +tatcgccctattgggttgtatgctggtgtggtggtggcccctggtctggggacgctacccgatgtggtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggctgagcagttgcgcctagctgtt +tgtgacttccttcgagggttaacgaatgttgcgcaggtatgtgtcgatgttgtatcccgag-------ttta +cggagttagccctgggttggtacataaccttattggcatgctgcaaaccatagctgatggcaaagcccactt +tacagagactgttaaacctgtgcttgacctcacgaactccatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtaccgcaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgtgatcagtccca----------- +------gcgcccctccgctgtcccacgtcgtcgatctgcccca---------gctggggctgcgccgctgac +cgccatatcacctgcccccgatacagcccctgtgcctgatgttgactctcgcggcgccatattgcggcgcca +gtacaatttatccacatccccgctcacatcatctgttgcttcgggtactaatctggttctttatgctgcccc +gctaaaccctttgctgccccttcaggatggcactaatactcacatcatggccactgaggcatctaattatgc +ccagtatcgggttgtccgagctacgattcgttacaggccattggtgccaaatgctgtcggcggttatgcaat +ttccatctcattttggccccagactactactacccccacgtctgttgatatgaactctattacttccactga +tgttaggattttagttcagcccggcattgcttctgagctggtaatccctagtgagcgcctccattatcgtaa +ccagggctggcgctctgtagagacctctggtgtggctgaagaggaggctacttccggtttggtaatgctttg +tatccatggctctcctgttaattcctacaccaataccccctataccggggcgcttggactccttgatttcgc +tttagagcttgagtttaggaacctgacacccgggaacaccaacacccgtgtgtcccggtatacaagcacagc +ccgtcatcggctgcgccgcggtgctgatggcaccgcggaacttaccaccacagcggccacgcgcttcatgaa +ggacttgcacttca---ccggtacgaat---ggggtcggtgaggtgggtcgtggtattgccctcacactctt +taatcttgctgacacgcttctcggtggtttgccgacagaattaatttcgtcggctgggggacagctattcta +ctcccgccccgtcgtctcagccaatggcgagccgactgtcaagttatacacatctgtagagaatgcgcagca +ggataaagggatcgctatcccacatgacatagatctgggtgactcccgtgtggttatccaagactatgacaa +ccagcatgagcaggatcgacccaccccctcgcctgccccttctcgccctttctcggttcttcgcgctaatga +tgttctatggctttc-----------------------------tcttacagccgccgagtatgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctcggatactgtcacatttgt---taacgtggct +acaggagcccaggctgtcgcccgttcccttgactggtctaaagttactctggacggccgccctcttactact +at-----ccagcagtactccaaaacattttatgttc-tcccgcttcgcgggaagttatctttctgggaggcc +gggacgactaag--gccggttacccctataattacaacacaactgctagtgatcagattctgattgaaaatg +cggctggtcat------cgtgttgctat-ttccacgtataccaccagcttggg--------------cgctg +gccctgtgtctgtttc-cgcagttggtgttttagccccacattcggcccttgcagtccttgaagacactatt +gatt---------accctgcccgtg----cccacacattcgacgatttctgcccggagtgtagcgctc---t +tggtctgcaggggtgtgccttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaatcaa-tt----tc-cctt---t------gt +gccc-cca--------tcaatag-cttat---agc-at---t----------------tatt-c-------a +ttttttct----gc----------------gtttccccgcccgga---------------------aaaaaa +aaaaaaa---------------aatattgcga---------------------------------------- +------------------------------------------aagacagcgtgcggg--------------- +-cggcggcgaggggagggcgag-------------------------------------------------- +----------- +>MF444087.1/17296/1-7296 |Hepeviridae isolate HEPAC25, complete genome +--------------------------------------------------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctccaggcattactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggtccggccgtttttatcccgtgtccagactgatatcct +tattaacctgatgcaacctcgacagcttgtgttccggcctgaagtcctctggaaccacccgatccaacgagt +tatacataatgagctggaacaata---ctgccgagccc-gcgctggccgctgtcttgaggtgggtgctcatc +caagatccattaatgataaccctaatgtcctgcaccgctgctttctccgcccggtcggaagagacgtccagc +gctggtattctgctcccactcgtggcccagcggctaactgccgccgttctgcgttacgcggtttgccccctg +tcgatcgcacatattgcttcgacgggttttcccgctgcgcttttgctgctgagaccgggatcgccttgtact +cattgcatgacctttggccctcggacgttgcggaggctatggcccgccacgggatgacgcgcttgtatgctg +ctctccactta-ccccctgaggttctgttaccacctggcacttaccacacaacctcctatcttttgattcac +gacggcaaccgtgccgtcgtgacttatgagggggataccagtgcgggctataaccacgatgtgtctatactt +cgtgcatggatccgcaccactaaaataattggtgaccacccactggtaatagagagggtccgtgccatcggc +tgccatttcgttttactccttactgcagcccccgagccatccccaatgccttatgttccgtacccccgctca +acagaggtgtatgtcagatccatatttggtcctggt---------gggtcaccttctcttttcccatcagcc +t----------gctctaccaagtcca-cattccatgctgtcccggttcatatctgggaccggcttatgcttt +ttggtgccaccctagacgaccaggccttttgctgttcgcggcttatgacctacctccgcgggattagctata +aagttaccgttggcgcattagtcgccaacgagggctggaatgcctcggaggacgcgcttaccgctgtgatta +ccgcagcgtacctgactatttgccatcagcgctacctacgaacacaggccatttctaaaggcatgcgtcggc +tggaggttgaacatgcccaaaaatttatcacaaggttatatagctggttgtttgaaaagtc---------ag +gccgtgactatatccccggccgccagctccagttctatgctcagtgccgccgttggctctcggctggctttc +atttggacccgagagttctcgtttttgacgaggcggtcccctgc---cgctgccggagcttcctaaagaa-- +----ggtcgccggaaaattttgttgttttatgaagtggttggggcagga------gtgcacctgtttcttgg +----------------agccagccgaaggcctggttggtgattgcggc--------catgataacgaggcct +atgaagggtccgaggtggaccccgccgagcctgcccatcttgatgtttccgggacctatgcggtctacggtc +gtcagcttgaggctctatacagagcgcttaatatcccagatgatattgcagctcgtgcgtcacgactgacgg +ctactgtggaacttgccgccagcccaggccgactcgagtgccgtacggtgcttgggaacaagacttttcgca +catcaataaccgatggtgcccatcttgaggccaacggccc------------------------tgagcagt +acgtcttgacatttgatgattcccaccaggtgatgggggctgggcctcatagccttacgtacgaacttgtcc +ccgctggtctgcaggttaaaatatcttct-------aatggcttggactgtaccgctatattcccc---ccc +ggtggggcgccaagcgccgcaccaggtgaagtggcggccttctgcagcgccctatacaggtacaatagattc +acccagcgtcattcgctgactggtgggctgtggctgcaccctgaggggctccttggcctgttcccccctttc +tccccggggcatcattgggagtctgcaaaccccttttgcggtgagagcacactttatacacgaacttggtct +acatctggtttctctagcgatttctcccctcccgaggcggcttgtgccgttccggcccctgacgt----agg +gctaccctcgggtgccccctcgtctgctagtgatat-----------------ctgggtgtt---------- +---------tccaccgctc----tctgaggggt--------------cggcgatcgtcccgccacccgtgac +cccggttagtaagccaactgg---------------------------------------cccgcc------ +------------------------------------------------------------------------ +-tagttttgc-------------------------------------------------------------- +-------------cgcacct----aggcctcccgccagcgaactgtctataccaccaccggccctaaccccg +g---------------------------------------------tcagtaagccggctaaatcgcctagt +ctctctacacctaag-------------------------------------ccccccgcccgcaggccgcc +tgcaccgcc--------------------------------------gccggctcgcactcgccggc----- +-------------------tcctttatacatatcctgacggcgccaaggtgtatgcaggctctttgtttgag +tcggattgtgactggctggttaatgcatctaaccctggccaccgccctggtggtggtctttgccatgcattt +taccagcgcttcccggagtcgt------tccatccgactgattttgtcatgcgtgaagg---cctcgccgca +tacactctgagcccgcgcccgatcattcatgctgtggcccccgactatagggttgagcagaaccccaagagg +ctagaggcggcatatcgtgagacctgctcccgcctcggcacagctgcctacccactactggggtcagggatt +taccaggtccccgtgggcttaagctttgacgcctgggagcgcaatcaccgtccaggcgatgaactttacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaatcactgaggacaccgc +cc------------gcacggccaaccttgcgcttgagattg------------actctgccactgagttggg +ccgtgcttgc---gccggttgtactgttagccccgggattgtccactaccaattcactgccggggttcctgg +ctccgggaagtccagstcyatacagcagggggatgtygatgttgtggtcgtgccaactcgtgagcttcgtaa +cagttggcgacgccgtggctttgctgcttttacaccccatacagcggcccgcgttactgccggccggcgtgt +ggtgatagatgaggcaccttcgctcccaccgcacctgcttctgctccatatgcagcgagcctcatcggtcca +tctccttggtgaccccaatcagatccctgccattgactttgagcacgccggcttggtcccagcgattcgccc +tgagctagcccctactagttggtggcatgtcacccaccgctgccccgccgatgtttgtgagctcatacgtgg +ggcttacccaaagattcagacgaccagccgtgtgttaagatccttattctggaatgag------cccgcggt +gggccagaggctggtcttcacgcaggcagccaaagcggccaaccctggcgcaatcaccgttcatgaggccca +aggtgccacgtttactgagaccaccattatagccacggccgatgctaggggtcttattcaatcttcccgtgc +acatgccatcgttgcacttactcgccatacagaaaaatgcgtcattttcgacgctcctggcctactgcgtga +ggtcggcatttctgatataattgttaataacttt------------------------------ttcctagc +tggtg--gtgaagtgggccatcatcgcccttctatcataccccgtggcaacccagaccagaacttagacac- +-----cctacgagcgttccctccatcttgccaaattagtgcctaccaccagctggctgaggagctgggccat +cggccggcaccagtggccgctgttctgcccccctgccctgaacttgagcaggggttactctatatgcctcag +gagcttacagtgtctgatagcgtcctaacttttgaactcacggacatagttcattgccgtatggctgccccc +agtcagcgtaaggcggtcctttccacgctcgtcggcaggtatggccgccggacgaagctgtatgaagcggcc +cattctgatgttcgcgagtctttagggaggtttatccctatcatcggaccggtccaggccaccacatgtgag +ttgtatgagctagttgaggccatggtggagaagggccaggacggctccgctgtgcttgaactcgacctctgc +agccgtgatgtctcgcgtattacatttttccagaaggattgtaataaatttacaacaggtgagaccattgct +cacggcaaggtgggccagggcatctcagcctggagtaagaccttctgtgctttattcggcccgtggttccgt +gcaattgagaaggagatcttggccctgcttccacccaacatcttttacggcgatgcctatgaggagtcagtg +ttttctgcagccatttctggggccggctccagtatg---gtttttgagaatgatttctcagagtttgatagt +acccaaaacaatttttctct------------------tggccttgagtgtgttattatggaggagtgtggc +atgccccagtggcttattagattgtaccacttagttagatcagcctggaccctgcaggccccaaaagagtct +ttgaaaggcttttggaagaagcaytctggcgarccyggtacccttctttggaacaccgtctggaacatggcg +attatagcacactgctatgaatttcgtgacttgaaggtagcagcgttcaagggggatgattctgtggttctt +tgcagtgactaccgccagagtcgcaatgccgccaccctgatagctggttgtgggttgaagttgaaagttgat +taccgacctataggtttgtatgccggcgttgtagtggctccgggcgtcggggcacttcctgatgttgtccgg +tttgctggtcgattatccgagaagaattggggcccaagccccgagcgcgccgaacaattgcgcttagcagtt +tgtgacttccttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacaaactattgctgatggaaaggcccactt +tactgagactgttaagcctgtgttggaccttacaaattctattatacagaggttggaatgaataacatgtt- +c----------------tgtgcattgcccatggg------------atcgtcatgcgccctagggctgttct +gctgttgctcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagtcgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgatgtcgtatcacaacccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctctgccgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgcggtctcaccagcgcctgacacagccccagtccctgatgttgactctcgtggcgctatcttgcgccgtca +gtataatctgtccacctcccctttaacttcatctgttgcctctggaactaaccttgtcttgtacgccgcccc +gcttaatccccttttgcccctccaagacggcactaacacgcacatcatggcgactgaggcgtctaattacgc +tcagtatcgggttgttcgggctacaatccgatatcgccctttggtgccgaacgccgtcggcggttatgcaat +ttctatttccttttggcctcagactacaactacacccacctctgtcgatatgaattctattacttctactga +tgttaggattttagtccagcctggcatagcctctgagctggtcatcccgagtgagcgccttcactatcgtaa +ccaaggctggcgctctgttgagacatcaggtgtggccgaggaggaggcgacatcaggcttggttatgctttg +tattcatggttcccctgtcaattcctatactaacacaccctacaccggggcattaggcctcctcgactttgc +acttgagcttgaattcaggaacttgacccctgggaacactaacacccgtgtgtcccgttacactagtacagc +ccggcaccgtttgcgtcgcggtgccgacgggacagccgagcttacaaccactgcagccacacgtttcatgaa +ggacttgcatttca---ccgggacaaat---ggtgtcggtgaggtaggccgcggcatagccctaacgttatt +caatcttgctgatacacttctcggcgggctgccgacagaattgatttcgtcggctggaggccagctgtttta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcgcagca +agataagggtattgcaataccacacgacatagatttaggggactcccgtgtggttatacaagactatgataa +tcaacatgaacaggatcggcctaccccgtcgccggccccgtcccgtcccttttcggtccttcgagccaatga +tgtcttgtggctctc-----------------------------tttgactgcggctgaatatgat------ +cagactacttatggctcgtcgactaaccccatgtatgtctcagacaccgtcacatttgt---taatgtggcg +acaggtgcccaggctgttgcccgagcccttgattggtccaaggtcactttggacggccggccactcactacc +at-----ccagcagtactccaagacattttatgtgc-tgccgctccgtggcaagctctctttttgggaagcc +ggcacgactaag--gctggctacccttacaattacaatactactgctagtgaccagattctgatcgagaatg +cggccggtcac------cgtgttgctat-atctacttacactactagtctcgg--------------tgccg +gccctgtgtctgtctc-tgcggttggcgttcttgctccgcactctgctctagctgtgcttgaagataccatt +gatt---------atcctgcccgcg----ctcatacttttgatgatttctgccctgagtgccgcaatc---t +tggcttgcagggctgtgctttccagtc--------tacaattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----tc-ccc--ttt------gt +gccc-cct-----------caaa-cc-tt----gc-cc-tgtt----------------att-t-------c +tcttttct----gcg---------------ttccg-cgcccc------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444088.1/17333/1-7333 |Hepeviridae isolate HEPAC46, complete genome +-----------------------tgcac---gtact-gcgcag-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggttcggccgtttttatctcgtgttcaaactgatatcct +tattaacctgatgcaaccccgacagcttgtgttccggcctgaggtcctctggaatcacccgatccaacgagt +catacataatgaactggagcaata---ctgccgagccc-gtgccggtcgctgtcttgaggttggcgctcacc +caagatctattaatgataaccccaatgttttgcaccggtgctttctccgcccggttgggagagatgtccagc +gttggtactccgctcccactcgtggtccagcggctaattgccgtcgttctgcgctccgcggtttaccccctg +tcgatcgcacatattgcttcgacgggttctcccgctgcgcttttgccgctgagaccgggatcgctctatact +cactgcacgacctctggccttcggatgtcgcggaggccatggctcgccatgggatgacgcgtttgtatgctg +ccctccactta-ccccctgaggttctgttaccacccggcacttaccacacaacctcctatcttctgattcat +gacggcaatcgcgccgtcgtgacttacgagggggataccagtgcgggttataatcatgatgtgtctatactt +cgtgcatggattcgtaccaccaaaatagttggcgatcacccgctggtaatagagagggtccgcgctattggc +tgccattttgttttactccttactgcagcccccgagccatccccaatgccttatgttccgtaccctcgttca +acagaggtgtacgttaggtccatatttggccctggt---------gggtcgccttctcttttcccatcagct +t----------gctctaccaagtcta-cattccatgctgtcccggttcatatctgggaccggctcatgcttt +ttggtgccactttagacgaccaggccttttgctgctcgcggcttatgacctatctccgcgggattagctaca +aagtgaccgttggcgcacttgtcgccaacgagggctggaatgcctcggaggatgcgctaaccgctgtgatta +ctgcagcgtacctgactatctgtcatcagcgctacttacgaacacaggccatttctaaaggcatgcgccggc +tagaggttgagcatgcccagaaatttatcacaaggctttatagctggctgtttgaaaagtc---------ag +gccgtgactatattcccggccgccagctccagttttacgcgcagtgccgccgctggctctcggctggcttcc +atctggaccctagagttctcgtctttgacgaggcagtcccctgc---cgctgccggagcttcctaaagaa-- +----ggttgccgggaaattttgttgttttatgaaatggttggggcagga------gtgcacctgttttttgg +----------------agccagtggagggcctggttggtgactgtggc--------catgataacgaggcct +atgaagggtctgaggtagaccccgccgagcctgcccatcttgatgtttccgggacttatgcggtccatggcc +gccagcttgaggctctatatagagcgcttaatatcccggatgacatcgcggctcgtgcgtcacgtctgacgg +ctactgttgaacttgccgccagcccaggcagactcgagtgtcgtacggtgcttgggaataagattttccgta +catcaataactgacggtgcccatctcgaagccaacggccc------------------------tgagcagt +acgtcctgacatttgatgactctcgccaggcaatgggggctgggcctcacagccttacgtatgaacttgtcc +ctgccggtctccaggttaaaatatcttct-------aatggcttggattgtgccgttatattcccc---ccc +ggcggggcgccaagcgccgcaccgggtgaagtggcggctttttgcagcgccctatacaggtacaataggttc +acccagcgccattcgctgactggtgggctgtggctgcaccctgaggggctccttggcctgttcccccctttt +tccccggggcatctttgggagtctgcaaatcccttttgtggtgagagcacactttatacacgaacttggtcc +acatccggtttttctagtgacttctccccacctgaggtggcttatgccgccccggtccctgacac----agg +gctaccctcgggtgccccctcctctgctagtgacat-----------------ctgggtgtt---------- +---------cccaccgccc----tctgaggggt--------------cggcgaccgtcctgccacccgtaac +cccggtcagtaagccaactaa---------------------------------------cccgcc------ +------------------------------------------------------------------------ +-tagccttac-------------------------------------------------------------- +-------------cacacct----tggactactgcccgtgagctgcttacagcaccaccggccctaaccccg +g---------------------------------------------ttagtaaaccagctaacccgcctagc +ctcgctacacctaag-------------------------------------ccccctgcccgcgagccgcc +cacaccgcc--------------------------------------accggctcgcactcgccgac----- +-------------------tcctctatacgtatcctgatggggccaaggtatatgcgggctccttgtttgag +tcagattgtgactggctggttaatgcatctaaccctggccaccgccctggtggtggtctctgtcacgcattt +taccagcgtttcccggagtcgt------ttcatccgaccgattttgtcatgcgtgaggg---tcttgctgca +tacactctgagcccgcgtccgattatccatgctgtggcccccgactacagggttgagcagaaccccaagagg +ttagaggcagcatatcgtgagacctgctcccgcctcggcacagctgcctatccgctactagggtcggggatt +taccaggtccctgtgggcttaagcttcgacgcctgggagcgtaatcaccgcccaggtgatgaactttacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gcctgccctaacaattactgaggacaccgc +cc------------gcacagctaacctcgcgcttgagattg------------actccgccactgaggtggg +ccgtgcttgt---gctggctgcactattaaccccgggattgtccactaccagttcactgccggggtccctgg +ttccgggaagtctaggtctatacagcagggggatgtygatgtcgtggttgtgccaactcgtgagcttcgtaa +cagttggcgacgccgcggctttgctgcttttacacctcatacagcagctcgtgtcactgccggccggcgtgt +ggtgatagacgaggcaccgtcgcttccgccgcacttgctgttgctccatatgcagcgagcctcgtcggtcca +tcttcttggtgaccccaatcagatccctgccattgactttgagcacgccggcttggtcccagcgatccgccc +tgagctagcccctactagctggtggcatgtcacccaccgctgccccgccgatgtgtgtgagctcatacgtgg +ggcctacccaaagattcagactaccagccgtgtgttgagatctttattttggaatgag------cctgcggt +aggtcagaggctggttttcacgcaggcagccaaggcggctaaccccggcgcaattaccgttcatgaggccca +gggtgctacgtttactgagactactattatagccacggccgacgctagaggccttatccaatcttcccgcgc +acatgccatcgttgcactcactcgccatacagagaagtgcgtcattcttgacgctcccggcctactgcgtga +gatcggtatttctgacgcaattgtcaataacttt------------------------------ttcctggc +tggtg--gtgaagtgggtcaccatcgcccttccattatacctcgcggcaacccagatcagaacttagacac- +-----cctccgagcgttccctccatcttgccagatcagtgcttaccaccagttggctgaggagctgggccat +cggccggccccagtgaccgccgtcctgcccccctgtcctgagcttgagcaggggttactctacatgccgcag +gagctcacggtgtccgatagtgtcctaatttttgaactcacggacatagttcactgccgtatggccgccccc +agccaacgtaaggcggttctttctacgctcgtcggcaggtatggccgccgaacgaagctgtatgaagctgcc +cattctgatgttcgcgagtctttagggcggttcatccctactatcggaccagtccaggccaccacatgtgag +ctgtacgagctggttgaggccatggtggagaagggccaggacggctccgccgtgcttgagctcgacctctgc +aatcgtgatgtctcgcgtattacatttttccagaaggattgtaacaaatttacaacaggtgagaccattgcc +cacggtaaggtgggccagggcatttcagcttggagtaagaccttctgtgctttattcggtccgtggttccgc +gctattgagaaggagattctggctctactcccacctaatgttttctatggtgatgcctatgaggaatcagtg +ttttctgcagccatttctggggctggttccagtatg---gtctttgagaatgatttttctgagtttgacagc +acccaaaacaatttctctct------------------cggccttgagtgcgttattatggaggagtgtggt +atgccccagtggcttgtccgactgtaccacctagttagatcagcctggattctgcaagccccgaaagagtct +ttgaaaggtttctggaagaagcattccggcgagcctggcactctcctttggaacactgtttggaacatggcg +atcatagcacactgctatgaattccgtgatttgagagtggcggcgtttaaaggggatgactcggtggtcctc +tgcagtgactaccgccagagccgcaatgcggccactctgatagccggttgtgggttgaaattgaaggctgat +taccgacctataggtttgtatgccggcgttgtagtggctccgggcctcggggcacttcctgatgtcgtccgg +tttgcaggtcgattatctgagaagaactggggtccgggccccgagcgcgctgaacagttgcgcctagcagtt +tgtgatttccttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggtcagccctgggctggtgcataaccttattggtatgttacagactattgctgatggaaaggcccattt +tactgagactgtcaagcctgtgctggatcttacaaattctatcatacagaggtcggaatgaataacatgtt- +c----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gctgttgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccga------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgatcctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtaccacaatccggggctggagctcgccctc +gacagccggtccg---------------ccccctcggctcctcttggcgcgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtttcaccggcgcctgacacagctccagtccctgatgttgactctcgtggcgctatcctgcgccgcca +atataatctgtccacctctcctttaacctcatctgttgcttctgggaccaatcttgttttgtacgctgcccc +gcttaaccctcttctgcctctccaggacggcaccaacactcatatcatggcgactgaggcgtctaattacgc +tcagtatcgggttgtccgggccacaatccgctatcgccctttggtgccgaatgccgtcggtggttatgcaat +ttctatctctttttggcctcagactacaactacacccacctctgttgatatgaattccatcacctctactga +tgttaggattctagtccaacctggcatagcctctgagctggtcatcccgagtgagcgcctccactatcgtaa +tcaaggttggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggcttggttatgctttg +tattcatggttcccctgtcaattcctataccaacacgccctataccggggcattggggctccttgattttgc +actcgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgttacactagtacagc +ccggcaccgtttgcgtcgtggtgccgatgggacagctgagcttacaaccactgcagccacacgttttatgaa +ggacctgcatttca---ccgggacaaat---ggtgttggtgaagtgggccgtggcatagccctaacgctatt +taatcttgctgatacacttctcggtgggctgccgacagaattgatttcgtcggctggaggtcaattgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggtattgccataccacacgacatagacttaggggattcccgtgtggtcatacaagactatgataa +ccagcacgagcaggaccggcctaccccgtcaccggccccatctcgccccttttcagtccttcgagctaatga +tgtcctgtggctctc-----------------------------tctgactgcggccgaatatgac------ +cagactacttatggctcgtcaactaaccctatgtatgtgtcagatactgtcacacttgt---taatgtggcg +acgggcgcccaggctgttgcccggtcccttgactggtccaaggtcactttggatggccggccactcactacc +at-----ccagcagtactctaagacattttatgtgc-tgccgcttcgtggcaagctttccttttgggaagct +ggtactactaag--gctggctacccttacaattacaacactactgctagtgaccagattttgatcgagaatg +cagccggtcac------cgtgttgccat-atctacttacaccactagtcttgg--------------cgccg +gccccgtgtctgtttc-tgcggtcggcgttcttgctccccactctgctctagctgtgcttgaagatactatt +gact---------atcccgcccgtg----ctcatacttttgatgatttctgccctgagtgccgcaatc---t +tggcctgcagggctgtgctttccaatc--------tactatcgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcctaattaa-tt----cc-cct--ttt------gt +gccc-cct--------tc-taaa-ct-tt----g--tc-tgtt----------------att-t-------c +ttt-ttct----gcg---------------ttccc---gcccccg---------------------gaaaaa +aaaaaa----------------aaaaaaaa------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444089.1/17171/1-7171 |Hepeviridae isolate HEPAC26, complete genome +-----------actgt------------ctctcgca-gcgatg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatcccgtgtgcagaccgagatcct +tattaatttgatgcaaccccggcaattggttttccgtcctgaggtgctttggaatcatcccattcaacgggt +tatacataatgagttagaacagta---ctgccgggctc-gggctggccgttgtttagaggtcggagcccacc +caagatccatcaacgacaaccccaatgtcctgcaccggtgtttcctacgaccggtcgggagggacgtccagc +gctggtattccgcccccacccgcggtcctgcggccaattgccgccgttctgctttgcgtggtctccctcccg +ccgaccgcacctactgttttgacgggttctcccgctgtgcttttgccgcagagaccggcgtggccctctatt +ccctgcatgacctctggccggccgatgttgcggaggctatggctcgacatgggatgacacgtttatacgccg +cactacacctc-ccccctgaggtgctactgccacctggtacctaccatacaacctcgtaccttttaatccat +gatggtgatcgtgctgttgtcacctatgagggtgacactagtgcggggtataatcatgatgtttctatcctc +cgtgcgtggatccgcacgaccaagatagttggtgatcatccgttggtgatagagcgtgtgcgagctattggg +tgtcattttgttctgctactcaccgcggcccccgagccgtcacccatgccttatgttccataccctcgatcg +acagaggtgtatgtccgctccatatttggccccgga---------ggatctccgtccctgttcccgtcagcc +t----------gctctactaaatcta-catttcatgccgtcccggtccatatctgggaccggctcatgctct +ttggcgccactctggatgatcaggcgttctgctgctcgcggcttatgacttacctccgtgggatcagctaca +aggtcacagtaggtgcccttgttgctaatgaaggttggaatgcctcagaggacgccctcactgctgtcatta +ctgcggcgtatttgaccatttgccaccagcgctacctccgtacccaggcgatatccaagggtatgcgtcggt +tggaggttgagcatgcccaaaaatttatcacgaggctttatagctggttatttgaaaaatc---------tg +gccgcgattatatccctggccgtcagctccaattttacgcacagtgccgtcgctggctgtcagcaggcttcc +atcttgaccctagggtgcttgtcttcgatgagtcagtgccctgc---cgctgtaggacgttcctcaagaa-- +----ggtagcaggaaaattttgctgttttatgaagtggttggggcagga------gtgcacttgttttttgg +----------------agccggccgaaggtctggtcggcgattgcggc--------catgataatgaagcct +atgagggttccgaggttgaccaggctgagcccgcacatcttgatgtctcggggacctatgctgttcatgggc +gtcagcttgaggccctgtacagggcacttaacatcccgcacgacattgctgcccgagcatcacgtctgactg +ccactgttgagctcgtcgcaggcccggatcgcttagagtgccgcactgtacttggaaataagaccttccgta +caacggtggttgacggcgcccatctcgaggccaacggccc------------------------tgaacagt +atgttctttcattcgatgctccccgtcagtctatgggggccgggccgcacaaccttacctatgagctcactc +ctgctggcttgcaggtaaagatctcgtct-------aacggcttagattgtaccgcaacattcccc---ccg +ggtggggctcccagcgcttcgccaggggaggtagctgctttctgtagcgccctttataggtataacagattc +acccagcggcactcgctgacgggcggtttgtggttacaccctgaggggttattgggtattttccctcccttc +tcccctgggcatctttgggaatccgccaaccccttttgcggggagggaaccctttatactcgcacttggtct +acatctggcttctctagtgatttttctccccctgaggcggccacctctgcgccggccgccattca----ggg +gctgcttg---accctacaccccctgccagtgacat-----------------ttgggtgct---------- +---------gccgccaccc----tccgaggagc--------------tccaggtcgatacgaaacctgcctc +cccca------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccttgagcctgctttatcgcccagg +cctgttgagcctaag-------------------------------------acccctgtgcgtaagccctc +gacaccacc--------------------------------------atcccctcgcacccgccgcc----- +-------------------tcctttacacctacccggacggcgctaaggtgtatgcagggtcattgtttgag +tcggattgtgactggctggttaatgcgtcaaaccctggccaccgccctgggggcggtctttgccacgccttt +taccaacggttccccgagtcgt------tccacccgaccgattttattatgcgggacgg---ccttgctgca +tacactttggtcccccgccccattatccatgcggtggcccctgactacagggttgaacaaaacccaaagagg +ctcgaggcagcgtaccgagagacttgctcccgtcgcggcaccgctgcctacccacttctaggcgcgggtata +tatcaagtccctgtcggccttagctttgacgcctgggagcgcaaccaccgccccggtgatgagctttatctg +accgaccctgccgctgcc-------------------------------------------------tggtt +tgaagctaataagcccatgca--------------------------------------------------- +------------------------------------------gccagcccttacgataactgaggatacagc +cc------------gtacagccaatctggcattggagatcg------------atgctgccacagaggttgg +ccgcgcttgt---gccggttgcacggttaccccaggaattgtgcattaccagttcactgccggggttccggg +ttcggggaaatcgaggtctatacagcagggtgatgttgatgtggtagttgtccccacccgggagcttcgtaa +taattggcgccgccgaggttttgcggcctttacaccccatacggccgcccgcgttactacgggccgccgtgt +tgtgattgacgaggccccatctcttccgccacatttattgctactgcatatgcagcgggcttcgtcggttca +tcttctcggcgacccaaatcagatccctgccatagactttgagcatgctggtctggtccccgctwtacgccc +tgagcttgcgcctaccagctggtggcatgtcacacaccgttgtcctgcagacgtgtgcgagcttatacgtgg +ggcctaccccaagatccaaaccacgagtagagtactacgatctctattttggaatgaa------cccgctat +cggccaaaaattggtcttcacacaggcagctaaggctgctaaccccggtgcgattacagtccatgaggccca +gggtgccaccttcacggaaaccacaatcatagccacggccgacgccaggggtctcattcaatcttcccgggc +ccatgccatagtcgcacttacccgtcatacagagaagtgcgttatactagatgcccctggtctgctgcgtga +ggttggcatatcagacataattgtgaataacttt------------------------------ttccttgc +tgggg--gggaggtgggtcaccaccgcccctctgtgataccccgtggcaatcctggtcagaatctygagac- +-----gctgcgggctttcccaccctcctgtcagatcagtgcttatcatcagctagccgaagagttgggccac +cgcccggcccctgttgccgcggttctgcccccctgccccgagctcgagcagggtttgctatacatgccccag +gagctcacggtgtctgatagtgtgttagttttcgagctcacagatatagttcactgccgtatggctgctccc +agccagcggaaggctgtcctatctacacttgtggggaggtatggccgcaggacgaagctgtatgaggcagcc +cattctgatgtccgtgagtctcttgccaggtttattcccactattgggcccgttcaggccaccacatgtgag +ctatacgagctggtcgaggctatggtggagaagggtcaggatggttccgccgtactagagctcgatctctgt +aatcgcgatgtatcgcgtatcacatttttccaaaaagattgtaataagtttaccaccggggagaccatcgcc +catggtaaggtcggtcagggcatctcagcctggagtaagaccttctgtgccctgtttggcccgtggtttcgt +gctattgagaaagagatactagcactactcccgcctaatatcttttacggcgacgcttatgaggactctgtg +tttgctgccgccgtttccggggcggggacgtgcatg---gtgtttgagaatgacttttcagagtttgatagc +actcagaacaatttttccct------------------tggccttgagtgtgtgattatggaggaatgcggc +atgccccagtggctgatccggctgtaccatctggttcgatctgcctgggttctgcaggcgccgaaggagtcc +cttagagggttttggaagaagcactctggtgagcctggcacccttctctggaacaccgtctggaacatggca +atcattgcacactgctatgagtttcgcgatttcagggtcgccgcctttaagggtgatgattcagtggttctt +tgcagtgactaccgtcaaagccgcaatgcggcagccttgattgcaggttgtgggctcaagctgaaggtcgac +taccgccctattgggttgtatgctggagtggtggtggcccccggtttggggacattgcctgatgtggtgcgt +tttgctggtcggctttctgagaagaactggggcccaggccccgagcgggctgagcagttacgtcttgcggtt +tgtgatttccttcgagggttaacgaatgtggcgcaggtttgtgttgatgttgtatctcgtg-------ttta +tggagttagccctgggctggtacataaccttatcggcatgctgcagactattgctgacggtaaggctcattt +tacagagactgttaaacctgtgcttgacctcactaactctatcatacaacggatggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgctcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgactggcc------------gccgtcgtgggcg-gcgcagcggcagtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtttcgcaacccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggttcctcttggcgcgaccagtccca----------- +------gcgcccctccgctgtcccccgtcgtcgatctgcccca---------gttggggctgcgccgctgac +tgccgtatcaccggctcccgacacagcccctgtgcctgatgtcgattcgcgtggcgccatattacgacggca +gtataacctgtcaacatctccgctcacatcatctgttgcttcgggtactaatttagttctatatgctgctcc +attaaatcctcttctacccctccaggatggcaccaatactcatattatggctactgaggcatctaattatgc +ccagtatcgggttgttcgagccacgatccgttatcgccctctggtgccgaatgctgtcggcggctacgcaat +ctctatttctttctggcctcagaccactaccacccctacatccgttgatatgaattctatyacttctactga +tgtcaggattttggtccaacccggtattgcctccgaattggtcatccccagtgagcgcctccactatcgcaa +tcagggttggcgctctgttgagacctcaggcgtggccgaagaggaggctacctccggtttggtaatgctctg +cattcatggctctcctgtcaattcttataccaataccccctatactggggcgcttgggctccttgactttgc +actagaacttgagtttaggaatttgacacccgggaacactaatactcgcgtgtcccggtacacaagcacagc +ccgtcaccggctgcgccgcggcgccgatggtactgctgaacttaccaccacggcggccacacggttcatgaa +ggatttacatttta---ctggtacgaat---ggggtcggtgaggtyggccgtggtattgctctgacattgtt +taatcttgctgatacgcttcttggtggtttgccgacagaattgatttcgtcggctgggggtcaattatttta +ctcccgccctgtcgtctcagccaatggcgagccgactgttaaattatatacatctgttgagaatgcgcagca +ggataaaggtattgccatcccgcatgacatagacctgggcgattctcgtgtggtcatccaggattatgataa +tcaacatgagcaggatcggcctaccccttcgcccgccccatcacgcccattttctgtcctccgtgctaacga +tgttttgtggctttc-----------------------------tcttaccgctgctgagtacgat------ +cagactacatatgggtcgtccaccaacccgatgtatgtctcggacactgtaacatttgt---taatgtagcc +acaggagcccaggctgttgcacgttctcttgactggtctaaggttaccttggacggccgccctcttactacc +at-----tcagcagtactctaaaacattctatgtcc-tcccgcttcgcgggaaattgtctttctgggaagcc +ggcacaactaag--gctggctacccttataattacaacacaactgctagtgatcaaatcttgattgaaaatg +cggctggtcac------cgtgtcgctat-ttctacctacaccactagcttagg--------------tgctg +gccccgtgtcggtttc-tgcagtaggtgtattagctccgcactcggcccttgccgctcttgaggacactgtt +gatt---------accctgctcgcg----cccatacttttgatgacttctgcccggagtgtcgcgccc---t +tggtttgcaggggtgtgccttccagtc--------cactrttgctgagcttcagcgtct------------- +--------taagatgaaggtaggtaaaacccgggagtcctaattaa-tt----c--cttc-t---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444090.1/17312/1-7312 |Hepeviridae isolate HEPAC169, complete genome +---------------------actgtg-------at-actgtc-------------a-----ggtcgaygc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggtccggccgtttttatcccgtgttcaaactgatatcct +tattaacttgatgcaacctcgacagcttgtgttccggcccgaagttctctggaatcacccgatccagcgagt +tatacataatgagctggagcaata---ctgccgggccc-gcgctggccgttgtcttgaagtgggcgcccacc +cgagatctattaatgacaaccccaatgttctgcaccggtgctttctccgcccggttggtagagacgtccagc +gctggtattccgcccccacccgtggtccagcggctaattgtcgccgttccgcgctacgcggtttgccccctg +tcgaccgcacatattgcttcgacgggttctcccgctgcgccttcgccgctgagaccgggatcgctttatact +cactgcatgacctttggccttcggatgttgcggaggctatggctcgccatgggatgacgcgcttgtatgctg +ccctccactta-ccccctgaagttctgttaccgcctggtacttaccacacaacctcctatctgctgattcac +gacggcaatcgtgccgtcgtgacttatgagggggatactagtgcgggttataaccacgatgtgtctatactt +cgtgcatggattcgcaccaccaagatagtcggtgatcacccgctggtaatagagagggtccgcgctattggc +tgccattttgtcttactccttactgcagcccccgagccgtccccaatgccttatgttccgtaccctcgttca +acagaggtgtatgttagatctatatttggccctggc---------gggtcgccttctctttttccatcagcc +t----------gctctactaagtcta-cattccatgccgtcccggtccatatctgggaccggcttatgcttt +ttggtgccaccttagatgaccaggccttttgctgctcgcggcttatgacctacctccgcggaattagttata +aagtgaccgttggcgcacttgtcgccaacgaaggctggaatgcctcggaggatgcgctaactgctgtgatta +ctgcagcgtatttgactatctgtcatcagcgctacctacgaacacaggccatttctaaaggcatgcgtcggt +tagaggttgagcacgcccaaaaatttatcacaaggctatatagctggttgtttgaaaagtc---------ag +gccgcgattacatccccggtcgccagctccaattttatgcgcagtgccgccgttggctctcggctggcttcc +atctggaccctagagtgctcgtctttgatgaggcggtcccctgc---cgatgccggagtttcctaaagaa-- +----ggtcgccggaaaattctgctgctttatgaagtggctggggcagga------gtgcacttgttttttgg +----------------agccagcggaaggcctggttggtgactgtggc--------catgataatgaggcct +atgaggggtctgaggtggaccccgccgagcctgcccaccttgatgtctctgggacttatgcggtccacggcc +gtcagcttgaggccctatatagagcgctcaacatcccagatgacattgcagcccgtgcgtcacgtctaacgg +ctaccgtggagcttgccgctagtccaggcaggctcgagtgccgcacggtgcttgggaataagattttccgta +cgtcaataactgacggtgcccatctcgaggccaacggtcc------------------------tgagcagt +acgtcttgacatttgatgattctcgccaagtgatgggggctgggcctcacagcctcacgtatgaacttgttc +ctgctggtctgcaggttaaaatatcttct-------aatggcctggattgtaccgccatattccct---cct +ggtggggcaccgagcgctgcaccaggcgaagtggcggctttctgcrgcgccctatacaggtacaataggttc +acccagcgccattcgctgactggcgggctgtggctgcaccccgaggggctccttggtctgtttccccctttc +tccccggggcatctttgggagtctgcaaaccccttttgcggtgagagcacactttatacacgaacttggtcc +acatctggtttttctagcgacttctccccacccgaggcggattatgccgccccagtccctgacat----ggg +gtcaacctcgggtgcccccacctccgctagtgatat-----------------ctgggtgtt---------- +---------tccaccgcct----tctgaggggt--------------cggcgatcattccgccacccataac +cccggtcggtaagccaactaa---------------------------------------tccgcc------ +------------------------------------------------------------------------ +-tggtcatac-------------------------------------------------------------- +-------------cacacct----aggccactcgcccgtgaaccgtccacaccaccatcggccctaacccca +g---------------------------------------------ttagtaagccagctaatctgcctagc +cttactgcacctagg-------------------------------------ccctccgtccgcgagccgcc +cacaccgcc--------------------------------------atcggcccgcactcgccggc----- +-------------------ttctttatacatattctgacggggccaaggtgtatgcaggctctttgtttgag +tcagactgttactggctggttaatgcatctaaccccggccaccgccctggtggyggtctctgtcatgcattc +taccagcgtttcccagagtcgt------ttcatccgaccgattttgttatgcgcgaggg---tctcgctgca +tacactttgagcccgcgtccgatcatccatgctgtggcccctgactacagggttgagcagaaccccaagagg +ctggaggcggcatatcgcgagacctgctcccgcctcggcacagctgcctatccactactagggtcagggatt +tatcaggtccctgtaggtctaagctttgacgcctgggagcgtaatcaccgcccaggtgatgaactttacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagccyaccca--------------------------------------------------- +------------------------------------------accagccctaacaattactgaggacaccgc +cc------------gcacagccaaccttgcgcttgagatcg------------actccgctaccgaggttgg +tcgtgcctgc---gccggctgcactattaaccccgggattgtccactaccagttcaccgccggggttcctgg +ctccgggaagtctagatctatacagcagggggatgtygatgttgtggtcgtgccaactcgcgagcttcgcaa +cagttggcggcgccgtggctttgctgctttcacacctcacacagcagctcgtgtcactgccggccggcgtgt +ggtgatagatgaagcgccctcgcttccaccgcacctgctgttgctccatatgcagcgagcctcatcagtcca +tcttcttggcgatcccaatcagatccctgccattgactttgagcacgccggtttggtcccggcgattcgccc +tgagctagcccccactagttggtggcatgtcacccaccgttgccccgccgatgtgtgcgagctcatacgcgg +ggcctacccaaagattcagacgaccagccgtgtgttgagatctttattttggaatgag------cctgcgat +aggtcagaggctggtattcacgcaggcagccaaggccgccaatcccggcgcaattaccgttcacgaggccca +gggggccacgtttactgagactaccatcatagccacggccgacgctagaggtcttatccaatcttctcgtgc +acatgccatcgttgcacttactcgccacacagaaaagtgcgttatcctcgacgctcctggcctattgcgtga +ggttggcatttctgatataattgtaaataacttt------------------------------ttcctggc +tggtg--gtgaagtgggccaccatcgcccttctaccatcccccgcggcaacccagaccggaacttagatac- +-----cctccaagcgtttcctccgtcctgccaaatcagcgcttaccaccagttagctgaggagctgggtcac +cggccggccccagtggccgccgtcctgcccccctgccctgagcttgagcaggggttactctacatgccgcag +gagcttacggtgtccgatagtgtcctaatttttgaactcacggatatagttcactgtcgtatggccgcccct +agtcaacgtaaggcggttctttmtacgctcgtcggcaggtacggccgccgaacgaagttgtatgaagcggcc +cactmtgatgtccgcgagtctttagggcggttcatccctactatcggaccggtccaggccaccacatgtgag +ctatatgaactggttgaggccatggtggagaagggccaggatggtactgctgtgcttgagcttgacctctgc +aaccgtgatgtctcgcgtattacatttttccagaaggattgtaacaaatttacaacgggtgagactattgcc +catggtaaggtaggccaggggatttcggcttggagtaaaaccttctgtgctttatttggcccatggttccgt +gccatcgagaaggagattctggctttgctctcacccaatattttctatggcgatgcctatgaggagtcagtg +ttctctgcggccatttctggggctggctccagtatg---gtttttgagaatgatttttctgagtttgacagc +acccaaaataatttctctct------------------tggccttgagtgcgttattatggaggagtgtggc +atgccccagtggcttattcgactgtaccatttagttagatcagcctggattctacaagccccgaaagagtct +ttgaaaggcttctggaagaarcattccggcgagcctggcactctcctttggaacaccgtctggaacatggcg +atcatagcacactgctatgaattccgtgacctgagagtagcagcgtttaaaggggatgactcagtggttctt +tgcagcgattaccgtcagagccgcaatgcggccactctgatagccggctgtgggttaaaattgaaggttgat +taccggcctataggtttgtatgccggcgttgtggtggctccgggcctcggggcacttcccgatgttgtccgc +tttgcaggtcgattatytgagaagaawtggggtccgggccccgagcgcgccgaacagttgcgcctagcagtt +tgtgattttctccgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccctgggttggtgcataaccttattggcatgctacagactattgctgatggaaaggcccattt +tactgagactgtyaagcccgtgctggatcttacaaactctatcatacagaggttagaatgaataacatgtt- +t----------------tatgcattgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgr------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattytcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaatccggggctggagctcgcccta +gacagccggtccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgtcccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtttcaccagcgcctgacacggccccagtccctgatgttgactcccgaggcgcaatcttgcgccgtca +gtataatctgtctacctctcctttaacttcatctgttgcctctggaactaatcttgtcctgtatgctgcccc +gcttaatcctctcctgcctcttcaggacggcaccaatactcacatcatggcgactgaggcgtctaattacgc +ccagtaccgggttgtccgggctacaatccgctatcgccctttggtgccgaatgccgtcggtggttatgcaat +ctctatttctttctggcctcagactacaactacacccacctctgttgatatgaattctattacttctactga +tgttaggattttagtccagcctggcatagcttctgagttggtcatcccgagtgagcgccttcactatcgtaa +ccaaggctggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggcttggtcatgctttg +tattcatggctcccctgttaattcttataccaacacgccctatactggggcgctggggcttcttgattttgc +actcgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgttatactagcacagc +ccggcaccgcctgcgtcgtggtgccgatgggacagctgagcttacaactactgcagccacacgttttatgaa +ggacctgcatttca---ccgggacaaat---ggcgttggtgaggtgggtcgtggcatagccctaacgctatt +taatcttgctgatacacttctcggtgggttgccgacagaattgatttcgtcggctgggggtcaactgtttta +ctcccgcccggtcgtctcagccaatggcgagccaactgttaagttatacacctctgtcgagaatgcacagca +ggataagggtattgctataccacatgatatagacttgggggattcccgcgtggttatacaagactatgacaa +ccaacatgaacaggatcgtcctaccccgtcgccggccccatcccgtcccttctcagtccttcgggccaatga +tgtcttgtggctctc-----------------------------tctgactgcagctgaatatgac------ +cagactacttatggctcgtcgaccaatcctatgtatgtttcagatactgttacatttgt---taatgtggcg +acaggcgcccaggctgttgcccgatctcttgattggtccaaggtcaccctggacggccggccacttactacc +at-----ccagcagtactccaagacattttatgtgc-tgccgcttcgtggcaagctttccttttgggaagct +ggtacgactaag--gctggctatccttataattacaacactactgctagtgaccagattctgattgagaatg +cagccggccac------cgtgttgctat-atctacttatactactagtcttgg--------------cgccg +gccctgtgtctgtttc-tgcagtcggcgttcttgctccgcactctgctttagctgtgcttgaagatactatt +gatt---------accccgcccgtg----cccatacttttgatgatttctgtcctgagtgccgcaacc---t +cggcctacagggctgtgcttttcagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-c-c--ttt------gt +gccc-cct--------tc-taat-ctttt----gt-ct-tgtt----------------att-t-------c +ttttttct----gcg---------------ttcc--cgctccc----------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444091.1/17209/1-7209 |Hepeviridae isolate HEPAC61, complete genome +-----------------------gtcgcgacgtcag-tgtatg-------------t-----ggtcgatgc- +---catggaggcccaccagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggctaattccgccttggcgaatgctgtggtggtccggccgttcctatcccgtgttcagaccgatatcct +tattaatctgatgcaacctcggcagctcgttttccggcctgaagtcttctggaatcatccaattcagcgagt +catacataatgagttggagcaata---ctgccgggccc-gtgccggccgctgcctagaagtaggcgctcacc +cgaggtccatcaatgacaatcctaatgtcctgcaccggtgctttcttcgcccggtcggcagagatgttcagc +gctggtattctgctcctactcgtggtccggcggccaattgccgtcgttctgcgcttcgcggtctgccccccg +ttgatcgcacttactgtttcgacgggttttcccgctgcgcttttgccgccgagaccgggattgctttatact +cactacatgacctctggccttcggacgttgcggaggccatggcccgtcacggaatgacgcgtttgtatgctg +tcctccattta-ccccctgaggtcctgttaccacctggcacatatcacacgacctcctatctcctgatccac +gatggtgaccgcgccgtcgtgacctatgagggggataccagtgcgggctataaccatgatgtctctatactt +cgtgcatggatccgcaccacaaaaatagttggtgatcatccactagtaatagagagggtccgcgccattggc +tgccactttgttttgctcctcactgcagcccccgagccatctcctatgccttatgtcccgtaccctcgttca +acagaggtgtatgtcaggtccatattcggccctggt---------gggtcaccctcccttttcccatcagcc +t----------gctctaccaagtcta-cattccatgctgtcccggttcatatttgggaccggctcatgctct +ttggtgccaccttagacgaccaggccttttgctgctcgcggcttatgacctacctccgcgggattagctata +aagtgaccgttggtgcacttgttgccaacgagggctggaatgcttcggaggatgcacttaccgctgttatta +ctgcagcgtacctgactatttgccatcagcgctacctccgaacccaggccatctctaaaggcatgcgccgac +tcgaggtcgagcacgcccaaaagttcatcacaaggctatacagctggctgtttgagaaatc---------ag +gccgtgattatatccccggtcgtcagcttcagttttatgcacagtgccgccgttggctctcagctggttttc +atttagaccctagagtcctcgtttttgatgaggcggttccctgt---cgctgccgaagcttcttaaaaag-- +----ggttgccggcaaattctgttgctttatgaaatggctggggcagga------gtgcacctgttttctgg +----------------agccggcggagggtttggttggcgactgtggc--------catgacaatgaggcct +acgagggatctgaggtggaccccgctgaacctgcccaccttgatgtttccgggacttatgcagtccatggcc +gtcagcttgaagctctatatagggcgttaaacatcccacatgacattgcggcccgcgcattacgtctgacag +ctactgtggagctcgccgctagcccgggccgacttgagtgccgtacagtgcttgggaataagacctttcgta +catcaataactgatggcgcccatcttgaggtcaacggccc------------------------cgagcagt +atgtcttgacttttgatgactctcgccaagcaatgggggctggacctcacagccttacgtatgaacttgtcc +ctgctggtctgcaggttaaaatatcttcc-------aacggcttggactgtaccgcagtattcccc---cct +ggtggggcgccaagcgctgcaccgggtgaagtggcggcgttctgcagtgccttatataggtataacaggttc +acccaacgccattcgctgaccggcgggctgtggctgcaccctgaggggctccttggtctatttccccctttc +tcccctgggcacctttgggagtctgcaaaccccttttgcggtgagagtacactttacactcgaacttggtct +acatctggtttttctagcgacttctccccccctgaggcggctcttgccgccacaggccccgatat----gag +gctaccacctagcaccccctcttctgctagtgatat-----------------ctgggtgct---------- +---------cccgtcgctc----tctgaggggt--------------cggttaccgttccgccacccgagac +cccag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttagtaagcctgctaacccgcctagc +cctgctgcacctaag-------------------------------------ccccctgctcgtaagccgcc +tacaccacc--------------------------------------gccggcccgtacccgccggc----- +-------------------tcctttacacttaccctgatggggctaaggtgtatgctggctccctgtttgag +tcagactgtgattggttggttaatgcgtctaaccccggccaccgccctggcggtggcctctgccatgcattc +taccagcgttttccggagtcat------tccatccgaccgactttgtcatgcgtgaggg---cctcgccgca +tataccctgagcccgcgcccgatcatccatgctgtggctcctgattacagggttgagcagaatccgaagagg +ttggaggcggcatatcgcgagacctgctctcgcctcggtacagccgcctacccgctgctggggtcagggatt +taccaggtccctgttggtctgagttttgacgcctgggagcgtaatcaccgcccgggcgacgaactctacctc +accgagccagccgccgcc-------------------------------------------------tggtt +tgaagctaataaaccaaccca--------------------------------------------------- +------------------------------------------gccggccctaacaattactgaggacaccgc +tc------------gcacagctaacctcgcgcttgagatcg------------actcagctaccgaggtggg +ccgtgcttgc---gccggctgtactgttagccccggggttgttcattaccagttcaccgccggggtccctgg +ctctgggaagtcttgctcyatacagcagggggatgtygatgttgtggttgtaccaacccgtgagcttcgcaa +cagctggcggcgccgcggcttcgccgccttcacaccccacacagcagctcgcgttactgccggccggcgtgt +tgtgatagatgaggcgccctcgctcccaccgcacttgctgctgcttcatatgcaacgagcctcatcggtcca +ccttctcggcgaccctaaccagatccctgctattgactttgagcacgccggtctggtcccggcgattcgacc +tgagctcgcccccactagttggtggcatgttacccaccgttgccccgccgatgtgtgtgagctcatacgcgg +agcctacccgaagattcagactactagtcgtgtgttgcgatccctgttctggaatgaa------cctgcggt +gggtcagaggttggtattcacacaggcagccaaggcggccaaccccggtgcaatcaccgttcacgaggccca +gggcgccacgtttacagagactactattatagctacggccgatgctagaggccttattcaatcctctcgtgc +acatgccatcgttgcacttacccgccatacagaaaaatgtgtcatccttgacgctcctggcctattgcgtga +ggttggcatttcagatattattgtcaataacttt------------------------------ttcctcgc +cggag--gtgaagtgggtcaccaccgcccttctaccatacctcgcggcaacccagaccgaaacttagacac- +-----cctacaagcgtttcctccttcctgccaaattagtgcctatcatcagttggctgaggagcttggccac +cggccggccccagtggccgctgtcttgcctccctgccccgagcttgaacagggcctactttacatgccacag +gagcttacagtgtctgatagtgtcctagtttttgaactcacggacatagttcactgccgtatggctgcccct +agccaacgtaaggcggttctttcgacactcgttggtagatacggccgtcgaacgaagttgtatgaagcagcc +cattctgacgtccgtgagtccttagggagatttattcctactatcgggccagtccaggccaccacgtgtgag +ctgtatgagttagtcgaggctatggtggagaagggtcaggacggctccgctgtgcttgagctcgacctctgt +agccgcgatgtctcgcgtatcacattcttccagaaggattgtaacaagtttacaacaggtgagaccattgct +catggcaaggtgggccagggcatttcagcttggagcaaaaccttttgtgccctatttggcccgtggtttcgt +gccattgaaaaggagattttggctttgctcccgcctaacattttctacggcgatgcctatgaggagtcagtg +ttttctgcagccatttctggagccggctccagcatg---gtttttgaaaatgatttttctgaattcgatagt +acccaaaacaacttttctct------------------tggccttgagtgtgttattatggaggagtgtggt +atgccccaatggcttatccgattgtaccatctggttagatcagcctggactctgcaagccccgaaagagtct +ttgaaaggtttttggaagaagcattccggcgagcctggcaccctcctttggaacaccgtctggaacatggca +atcatagcacactgctatgaattccgtgacttgagagtggcagcgtttaaaggggatgattcagtagtcctt +tgtagtgactaccgtcagagccgcaatgcggccgccttgatagccggctgtgggttgaaactgaaggttgac +tatcgtcctataggtttgtatgccggcgttgtagtggctccgggcctcggggcacttcccgacgtcgtccgg +tttgccggtcgactgtccgagaagaactggggcccgggccctgaacgcgccgaacagttgcgcctagcagtt +tgtgattttctccgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccctggactggtacataaccttattggcatgctacagactattgctgacggaaaggcccactt +tactgagaccgtcaagcctgtactggatctgacgaattctattatacagaggttagaatgaataacatgtc- +t----------------tgtgcatcgcccatggg------------atcgtcatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgccgacgttgtaccacaacccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------gctggggctgcgccgttaac +tgctgtttcaccagcgcctgatacagccccagttcctgatgttgactctcgtggcgctattctgcgtcgcca +gtacaatttgtccacctctcccctgacctcgtctgttgcttctggaactaaccttgtcttatatgccgcccc +gcttaaccctctcctgcccctccaagatggcaccaatactcacatcatggcgaccgaggcgtccaattatgc +ccagtaccgagttgttcgggctacaattcgctaccgccctttggtgccgaatgccgttggtggttatgcaat +atctatttccttctggccccagaccaccactacacctacttctgttgatatgaactctattacttctactga +tgttaggatattagttcagcctggtatagcttctgagctggttatcccgagtgagcgtctgcactaccgtaa +ccagggttggcgctctgttgagacctcgggtgtggccgaggaggaggcgacatcaggcctagtcatgctctg +tatccatggctcccctgttaattcctatactaacacgccctatactggtgcactggggcttcttgattttgc +actcgagcttgaatttagaaatctgacccctgggaacactaatacccgtgtgtcccgttacaccagcactgc +ccgacaccgcctgcgccgcggcgccgatgggacggccgagcttaccactactgcagccacacgctttatgaa +ggacctgcacttta---ccgggacgaat---ggtgtcggcgaagtaggccgtggtatagccctcactttatt +caatcttgctgacacacttctcggcgggctgccgacagaattgatttcgtcggctggaggccaactatttta +ctcccgtccggttgtctcagccaatggcgagccgactgtaaagctgtacacctccgttgagaatgcgcagca +ggacaagggtattgctataccacatgatatagacttaggggactcccgtgtggtcattcaagattatgataa +ccaacatgaacaagaccggcctaccccgtcaccggccccgtcccgccccttctcggtcctccgtgccaatga +cgtcctgtggctttc-----------------------------tttgactgcagccgagtatgat------ +caaaccacctacggctcgtcgactaaccctatgtatgtttcagatactgtcacacttgt---gaatgtggcg +acgggtgctcaggctgttgcccgctctcttgattggtccaaggtcaccttagacggccggcctcttactacc +at-----tcagcagtattctaagacattctatgtgc-tgccgcttcgtggcaagctctccttttgggaggct +ggcacgactaag--gccggctatccttataattacaatactaccgccagcgaccagattttgattgagaatg +cagccggtcat------cgtgttgctat-atccacttacactactagtcttgg--------------cgctg +gccctgtgtcagtttc-cgcagttggcgtcctcgccccacattctgctttagctgtgcttgaagatactatc +gact---------accctgctcgcg----cccatacttttgatgatttctgccctgagtgtcgtaatc---t +cggcctacagggttgtgcttttcaatc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaatta--------tt-cct--ttt------gt +gccc-cct--------tc-tgag-ct-tt----a--ct-tgt----------------tact-t-------c +ttttt------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444094.1/17294/1-7294 |Hepeviridae isolate HEPAC177, complete genome +------------------------atg----tagta-gtgagc-------------a-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatcccgtgttcaaactgatatcct +tattaacctgatgcaaccccgacagcttgtgttccggcccgaagtcctctggaatcacccaatccagcgagt +tatacataatgagctggagcaata---ctgtcgagccc-gcgctggccgttgtcttgaagtgggcgctcatc +caagatctattaacgataaccccaatgttttgcaccggtgctttctccgcccggttgggagagacgtccagc +gctggtattccgcccccactcgtggtccagcggctaattgccgccgttctgcgctacgtggtttgccccctg +tcgaccgtacgtactgcttcgacgggttctcccgctgcgcctttgccgctgagaccgggatcgctttatact +cactgcatgacctttggccctcggatgtcgcagaggctatggcccgccacgggatgacgcgcttgtatgctg +ccctccaccta-ccccccgaagttctgctaccaccaggaacttatcacacaacctcctatcttctgatccac +gacggcaatcgtgccgtcgtgacttacgagggggatactagtgcgggttacaaccacgatgtgtctatactt +cgtgcatggatccgcaccactaaaatagttggtgaccacccactggtaatagagagggtccgcgccatcggc +tgccattttgtcttactccttactgcagcccctgagccgtccccaatgccttatgtcccgtaccctcgttca +acggaggtgtacgttagatccatatttggccctggt---------gggtcgccttcacttttcccatcagcc +t----------gctctaccaagtcta-catttcatgccgtcccggttcatatctgggaccggctcatgctct +ttggtgccaccttagacgaccaggccttttgctgctcgcggcttatgacctacctccgcggaattagctata +aagtgaccgtaggcgcactcgtcgccaacgaaggctggaatgcctcggaggatgcgctaaccgctgtgatta +ctgcagcgtatttgactatctgtcaccagcgctatctacgaacacaggccatttctaaaggcatgcgtcggc +tggaggttgagcacgcccaaaaatttattacaaggttatacagctggctgtttgaaaagtc---------ag +gccgtgattacatccccggtcgccagctccaattctatgcgcagtgccgccgctggctctcggctggcttcc +atctggatcctagagttctcgtctttgatgaggcggtcccctgc---cgatgccggagcttcctaaagaa-- +----ggtcgctgggaaattttgttgctttatgaagtggttggggcagga------gtgcacttgttttttgg +----------------agccagcggaaggcctggtcggcgactgtggc--------catgataatgaggcct +atgaggggtctgaggtggaccccgccgagcctgctcaccttgatgtttccgggacttatgcggtccacggtc +gtcagcttgaggccctatatagggcgctcaatatcccagatgacattgcagctcgtgcgtcacgtctgacag +ctaccgtggagcttgccgccagcccaggcagactcgagtgccgcacggtgcttgggaataagatcttccgta +catcaataactgatggtgcccatctcgaggccaacggtcc------------------------cgagcagt +acgttttgacatttgatgattcccgccaagtgatgggagctgggcctcacagcctcgcgtatgaacttgtcc +ccgctggtctgcaggttaaaatatcttct-------aatggcttggattgtaccgctacatttcct---cct +ggtggggcgccgagcgccgcaccaggtgaagtggcggctttctgtagcgccctgtacaggtacaataggttc +actcagcgccattcgctgaccggtgggctgtggctgcaccctgaggggctccttggcctgtttccccctttc +tctccggggcatctttgggagtctgcaaaccccttctgtggtgagagtacactttacacacgaacttggtct +acatctggtttttctagcgacttctccccacccgaggcagcttatgctgccccagtccctgacat----ggg +gccaccctcgggtgccccctcttccgctagtgatat-----------------ctgggtgtt---------- +---------tccaccgccc----tctgaggggt--------------cggcgagcattccgccacctataac +cccggtcggtaagccagctaa---------------------------------------tttacc------ +------------------------------------------------------------------------ +-tggtcacac-------------------------------------------------------------- +-------------tgtatct----aggccaaccgcccgcgagccgcccacaccaccatcggccctaacccca +g---------------------------------------------ttagtaagccggctaacccgtctggc +cttactgcacctagg-------------------------------------cctcctgttcgtgagctgcc +cacactacc--------------------------------------atcggtccgcactcgccggc----- +-------------------ttctttatacatatcctgacggggctaaggtgtatgcaggctctttgtttgag +tcagattgttactggctggtcaacgcatctaaccctggccaccgtcctggtggtggcctctgccatgcattt +taccagcgcttcccagagtcgt------tttatccgaccgattttgtcatgcgcgaggg---tctcgccgca +tacactttgagcccgcgtccgatcatccatgctgtggcccctgactacagggttgagcagaaccccaagagg +ctggaggcggcatatcgcgagacctgctcccgcctcggcacggctgcctacccgttactgggttcagggatc +taccaggtccctgtgggtctaagctttgacgcctgggagcgtaatcatcgcccaggcgatgagctttacctt +actgagccagccgccgcc-------------------------------------------------tggtt +tgaggctaataagcccaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacactgc +tc------------gtacagctaaccttgcgcttgagattg------------actccgccactgaggtagg +ccgcgcctgt---gccggctgcactattaaccccggggttgttcactaccagttcaccgccggggttcccgg +ctccgggaagtctaggtctatacagcagggggatgtygatgttgtggtcgttccaactcgtgagcttcgtaa +cagttggcggcgtcgcggcttcgccgcttttacacctcacacagcagctcgtgtcactgccggccggcgtgt +ggtgatagatgaagcaccttctcttccgccgcacctgctgttgctccatatgcagcgggcctcgtcagtcca +tcttcttggcgaccccaatcagatccctgccattgactttgagcacgccggtttggtcccggcgattcgccc +tgagctagcccctactagttggtggcatgtcacccaccgctgccccgccgatgtgtgtgagctcatccgcgg +ggcctacccaaagattcagacgaccagccgtgtgctgagatctctattttggaacgag------cctgcggt +aggtcagaagctggtcttcacgcaggcagccaaggccgctaatcccggcgcaattaccgttcacgaggccca +gggggccacgtttaccgagaccaccatcatagccacggccgacgccagaggtcttattcaatcttcccgcgc +acacgccatcgttgcacttacccgccatacagaaaagtgcgtcattctcgacgctcctggcctattgcgtga +ggtcggcatctctgatataattgttaataacttc------------------------------ttcttggc +tggtg--gtgaagtgggtcaccatcgcccctctaccatccctcgcggcaacccagaccagaacttagacac- +-----cctccaagcgttccccccgtcctgccaaatcagcgcttaccaccagctggctgaggagctgggccac +cggccggccccggtggccgccgtcctgcccccctgccctgagcttgagcaggggttactctacatgccgcag +gagcttacggtgtccgacagtgttctaatttttgaactcacggacatagttcactgtcgtatggctgccccc +agtcaacgtaaggcggtcctttctacgctcgttggcaggtacggccgccgaacaaagctgtatgaagcagcc +cattctgatgtccgcgagtctttaggtaggttcatccctactatcgggccggtccaggccaccacatgtgag +ttatatgagctggttgaggctatggtggagaagggccaggatggttccgctgtgcttgagcttgacctctgc +aaccgtgatgtctcgcgtatcacatttttccagaaggattgtaacaaatttacaacaggtgagactattgcc +cacggtaaggtgggccagggcatctcggcttggagtaaaaccttctgtgctctatttggcccatggttccgt +gccattgagaaggagattctggctctgctcccacccaatattttctatggcgatgcctatgaggagtcagtg +ttctctgcagccatttctggggctggctccagtatg---gtctttgagaatgatttttctgagtttgatagc +acccaaaataatttctctct------------------cggccttgagtgcgttattatggaggagtgtggc +atgccccaatggcttatccgactgtaccatttagttagatcagcctggattctgcaagccccaaaagagtct +ctgaaaggcttctggaagaagcattccggcgagcctggcactctcctttggaacaccgtctggaacatggcg +atcatagcacactgctatgaattccgtgacctgagagtggcagcgtttaaaggggatgactcagtggtcctt +tgcagtgattaccgtcagagctgcaatgcggctactytgatagccggttgtgggttgaaattgaaggttgat +taccggcctataggtttgtatgccggcgttgtagtggccccgggcctcggggcacttcctgatgttgtccgc +tttgcaggtcgattatytgagaagaattggggtccaggtcccgagcgcgccgaacagttgcgcctagcagtc +tgtgattttcttcgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacagactattgctgatggaaaggcccattt +tactgagactgttaagcctgtgttagaccttacaaattctatcatacagaggttaraatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggyc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaacccggggctggagctcgcccta +ggcagccggcccg---------------tcccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgttaac +tgctgtttcaccagcgcctgatacggccccagtccctgatgttgattctcgtggcgctatcctgcgccgtca +gtataatctgtccacctcccctttaacctcatctgtcgcctctggaactaatcttgttttgtatgctgcccc +gcttaatccccttctaccccttcaggacggcaccaatactcacattatggcaactgaggcgtctaattacgc +tcagtaccgggttgtccgggcaacaatccgttatcgccccttggtgccgaatgccgtcggtggctatgcaat +ttctatttcattctggcctcagactacaactacacccacctctgttgacatgaactccattacttctactga +cgttaggattttagtccagcctggtatagcctctgagctggtcatcccgagtgagcgcctccactaccgtaa +tcaaggttggcgctctgttgagacatcaggtgtggccgaggaggaggcgacatcaggtttggtcatgctctg +tattcatggttcccctgttaattcttataccaacacgccctatactggggcattggggctcctcgattttgc +actcgagcttgaatttagaaatttgrctcctgggaacactaacacccgtgtgtcccgttacaytagtacagc +ccggcaccgcctacgtcgtggtgccgatgggacggctgagctgacaaccactgcagccacacgtttcatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggtgaggtgggtcgtggtatagccctaacgctatt +taatcttgctgatacacttctcggcgggttgccgacagaattgatttcgtcggctggaggccaactgtttta +ctcccgcccggttgtctcagccaatggcgagccaactgttaagttatacacctctgtcgagaatgcgcagca +ggataagggcatcgctataccacatgatatagacttgggggactctcgtgtggttatacaagactatgacaa +ccaacatgaacaggaccggccaaccccgtcgccggccccatcccgtcccttttcagtccttcgggctaatga +tgtcttgtggctttc-----------------------------tctgactgcagctgaatatgac------ +cagactacttatggctcatcaaccaatcctatgtatgtttcagataccgtcacatttgt---taatgtggcg +acaggcgcccaggccgttgcccgatcccttgattggtccaaggttactttggatggccggccacttattacc +at-----ccagcagtactccaagacattttatgtgc-tgccgcttcgcggcaagctttccttttgggaagct +ggtacgactaag--gctggctacccttataattacaacactactgctagtgatcaaattttgattgagaatg +cagccggtcac------cgtgttgctat-atccacttacactactagtctcgg--------------cgccg +gccctgtgtctgtttc-cgcagtcggcgttcttgctccgcactctgttttagctgtgattgaagatactatt +gatt---------atcccgcccgtg----cccatactttcgatgatttctgccctgagtgccgtaatc---t +cggcctgcagggctgtgctttccagtc--------tactattgctgagcttcagcgcct------------- +--------taaaatgaaggtaggtaagacccgggagttttaattaa-tt----cc-t-c--ctt------gt +gccc-cct--------tc-taat-ctctg----cc-gg-tatt----------------ctc-t-------c +cgct-------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444098.1/17280/1-7280 |Hepeviridae isolate HEPAC33, complete genome +-----------------------------------------------------------------cgatgc- +---catggaggcccatcagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggttcggccgtttttatcccgtgttcaaactgatatcct +tattaacctgatgcaaccccgacagcttgtgttccggcctgaagtcctctggaatcatcctatccaacgagt +catacataatgaactggagcaata---ctgccgagccc-gtgctggtcgctgtcttgaggttggcgctcacc +caagatctattaatgataaccccaatgttttgcaccggtgctttctccgcccggttgggagagatgtccagc +gttggtactccgctcccactcgtggtccggcggctaactgccgtcgttctgcgctccgcggtttaccccctg +tcgatcgcacatattgcttcgacgggttctcccgctgcgcttttgccgctgagaccggggtcgctctatact +cactgcacgacctctggccttcggatgtcgcggaggctatggctcgccatgggatgacacgtttgtatgctg +ccctccactta-ccccccgaggttttgttaccacccggcacttaccacacaacctcctatcttttgattcat +gacggcaatcgtgccgtcgtgacttatgagggggataccagcgcaggttataatcacgatgtgtctatactt +cgtgcatggattcgtaccaccaaaatagttggcgatcacccgctggtaatagagagggtccgcgccattggc +tgccattttgttttacttcttactgcggcccccgagccatccccaatgccttatgttccgtacccccgttca +acagaggtgtacgttaggtccatatttggccctggt---------gggtcgccttctcttttcccatcagct +t----------gctccaccaagtcta-cattccatgctgtcccggttcatatctgggaccggctcatgcttt +ttggcgccaccttagacgaccaggccttttgctgctcgcggcttatgacctatctccgcgggattagctaca +aagtaaccgttggcgcacttgtcgccaacgagggctggaatgcctcggaggatgcgctaaccgctgtgatta +ctgcagcgtacctgactatctgtcatcagcgctacctacgaacacaggccatttctaaaggcatgcgccggc +tagaggttgagcacgcccagaagtttatcacaaggctttatagctggctgtttgaaaagtc---------ag +gccgtgactatatccccggccgccagctccagttttatgcgcagtgccgccgttggctctcggctggcttcc +atctggaccctagagttctcgtctttgatgaggcggtcccctgc---cgctgccggagcttcttaaagaa-- +----ggttgccggaaaattttgttgttttatgaaatggttggggcagga------gtgcacctgttttttgg +----------------agccagcggagggcctggttggtgactgtggc--------catgataacgaggcct +atgaggggtctgaggtagaccccgccgagcctgcccatcttgatgtctccgggacttatgcagtccatggcc +gccagctagaggctctatatagagcgcttaatatcccggacgacatcgcggctcgtgcgtcacgtctgacgg +ctactgtggaacttgccgccagcccaggcagactcgagtgtcgtacggtgcttgggaataagatcttccgca +catcaatagctgacggtgcccatctcgaggccaacggccc------------------------tgagcagt +acgtcctgacatttgacgattctcgccaggcgatgggggctgggcctcacagccttacgtatgaacttgtcc +ctgccggtctccaggttaaaatatcttct-------aatggcttggattgtgctgttatattcccc---ccc +ggcggggcgccaagcgccgcaccgggtgaagtggcggccttctgtagcgccctatacaggtacaataggttc +acccaacgccattcgctgactggtgggctgtggctgcatcctgaggggctccttggcctgttcccccccttt +tccccggggcatctttgggagtctgcaaatcccttttgcggtgagagcacactttatacacgaacttggtcc +acatctggtttttctagtgatttctccccacctgaggcggcttatgccgccccggtccctgacac----agg +gttgccctcgggtgccccctcctctgctagtgatat-----------------ctgggtgtt---------- +---------tccaccgccc----tctgaggggt--------------cggcgacagtcccgtcacccataac +cccggttactaagccaactaa---------------------------------------cccgcc------ +------------------------------------------------------------------------ +-tagtcttac-------------------------------------------------------------- +-------------tacacct----tggactactgcccgtgagctgcttacgccaccaccggccctaaccccg +g---------------------------------------------ttagtaaaccagctaacccgcctagc +ctcgctacacctaag-------------------------------------cccctcgcccgcgagccgcc +cacaccgcc--------------------------------------accggctcgcactcgccgac----- +-------------------tcctctatacgtattctgacggggccaaggtatatgcgggctccttgtttgag +tcagattgtgactggctggtcaatgcatctaaccctggccaccgccctggtggtggtctctgtcacgcattt +taccagcgtttcccggagtcgt------ttcatccgaccgattttgtcatgcgtgaggg---tctcgccgca +tacactctgagcccgcgtccgattatccatgctgtggcccccgattacagggttgagcagaaccccaagagg +ctagaggcagcatatcgtgagacctgctcccgcctcggcacagctgcctacccgctattagggtcggggatt +taccaggtccctgtgggcttaagcttcgacgcctgggagcgtaatcaccgcccaggcgatgaactttacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataggccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacaccgc +tc------------gcacagctaacctcgcacttgagatcg------------actctgccactgaggtggg +ccgtgcttgt---gctggctgcaccattaatcccgggattgtccactatcagttcactgccggggttcctgg +ctccggtaagtctagrtcyatacagcagggggatgtygatgtcgtggttgtgccaactcgtgagcttcgtaa +cagttggcgacgccgcggctttgctgcttttacacctcatacagcagctcgtgtcactgccggccgacgtgt +ggtgatagacgaggcaccatcgcttccgccgcacttgctgctgctccatatgcagcgagcctcatcggtcca +tctccttggtgatcccaaccagatccctgccattgactttgagcacgccggcttggtcccagcgatccgccc +tgagctagcccctactagctggtggcatgtcacccaccgctgccccgccgatgtgtgtgagctcatacgcgg +ggcctatccaaagattcagactaccagccgtgtgttgagatctttattttggaatgag------cctgcggt +aggtcagaggctggtttttacgcaggcagccaaggcggccaaccccggcgcaattaccgttcatgaggccca +gggcgccacgtttactgagaccactattatagccacggccgacgctagaggccttatccaatcttcccgtgc +acatgccatcgttgcactcactcgccatacagagaggtgcgtcatttttgacgcccctggcctactgcgtga +gatcggtatttctgacgtaattgtcaataacttt------------------------------ttcctggc +tggtg--gagaagtgggccaccaccgcccttccatcatacctcgcggcaacccagaccagaacttagacac- +-----tctccgagcgttccctccgtcttgccaaattagtgcttaccaccagttggctgaggagctgggccac +cggccggccccagtggccgccgtcctgcccccctgtcctgagcttgagcaggggttactctacatgccgcag +gagctcacggtgtccgatagtgttctaatttttgaactcacggacatagttcactgccgtatggctgccccc +agccaacgtaaggcggttctttctacgctcgtcggcaggtatggccgccgaacaaagttgtatgaagctgcc +cattctgatgttcgcgagtctttagggcggttcatccctactattgggccagtccaggccaccacatgtgag +ctgtatgagctggttgaggccatggtggagaagggccaggacggctccgccgtgcttgagctcgacctctgc +aatcgtgatgtctcacgtattacatttttccagaaggactgtaacaaatttacaacaggtgagaccattgcc +cacggtaaggtgggccagggcatttcagcttggagtaaaaccttctgtgctttatttggcccgtggttccgc +gctattgagaaggagattctggctctactcccacccaatgttttctatggtgatgcctatgaggaatcagtg +ttttctgcagccatttctggggctggttccagtatg---gtttttgagaatgacttttctgagtttgacagc +acccaaaacaatttctctct------------------cggccttgagtgcgttatcatggaggagtgtggt +atgccccagtggcttatccgactgtaccatctagtcagatcagcctggattctgcaagccccgaaagagtct +ttgaaaggtttctggaagaagcattccggcgagcctggcactctcctttggaacaccgtttggaacatggcg +atcatagcacactgctatgaattccgtgacttgagagtggcggcgtttaaaggggatgattcggtggtcctt +tgcagtgactaccgtcagagccgcaatgcggccactctgatagccggttgtgggttgaaattgaaggttgac +taccgacctataggtttatatgccggcgttgtagtggccccgggcctcggagcacttcctgatgtcgtccgg +tttgcaggtcgattatctgagaagaactggggtccgggccccgagcgcgccgaacagttgcgcctagcagtt +tgtgatttcctccgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +cggggttagccctgggctggtgcataaccttattggtatgttacagactattgctgatggtaaggcccactt +tactgagactgtcaagcctgtgctggatcttacaaattctatcatacagaggttggaatgaataacatgtt- +c----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gctgctgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaatccggggctggagctcgtcctc +gacagccggcccg---------------ccccctcggctcctcttggcgcgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctacccca---------accggggctgcgccgctaac +tgctgtttcaccagcgcctgacacagccccagtccctgatgttgactctcgtggcgctatcctgcgccgcca +gtataatttgtctacctcccctttaacttcgtctgttgcctccgggactaatcttgttttgtacgctgcccc +gcttaaccctcttctgcccctccaggatggcaccaacactcatatcatggcgactgaggcgtctaattacgc +tcagtatcgggttgtcagggccacaatccgctatcgccctttggtgccgaatgccgtcggtggctatgcgat +ctctatctccttttggcctcagactacaactacacccacctctgttgatatgaattccatcacctctactga +tgttaggattctagtccagcctggcatagcctctgagctggtcatcccgagtgagcgcctccattatcgtaa +tcaaggttggcgctctgtcgagacatcgggcgtggccgaggaggaggcgacatcaggcttggttatgctttg +tattcatggttctcccgtcaattcctataccaatacgccctataccggggcattggggctccttgactttgc +actcgagcttgaatttagaaatttgacccctgggaacactaatacccgtgtgtcccgttacactagtacagc +ccggcatcgtttgcgtcgtggtgctgacgggacagctgagctcacaaccactgcagccacacgttttatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggtgaagtgggccgtggtatagccctaacgttatt +taaccttgctgatacacttctcggcgggctgccgacagaattgatttcgtcggctggaggtcaattgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggtattgctataccacacgacatagacttaggggattcccgtgtggtcatacaagattatgataa +ccagcatgaacaggaccggcctaccccgtcaccggccccatctcgccccttttcagtccttcgagctaatga +tgtcctgtggctctc-----------------------------tctgactgcggccgaatatgac------ +cagactatttatggctcgtcaactaaccctatgtatgtgtcagatactgtcacacttgt---taatgtggcg +acgggcgcccaggctgttgctaggtcccttgactggtccaaggtcactttggatggccggccactcactacc +at-----ccagcagtactctaagacattttatgtgc-tgccgcttcgtggtaagctttccttttgggaagct +ggtacgactaag--gctggctacccttataattataatactactgctagtgaccagattttgatcgagaatg +cagccggtcac------cgtgttgccat-atctacttacactactagtcttgg--------------cgccg +gtcccgtgtctgtttc-tgcagttggcgtccttgctcctcactctgctctagctgtgcttgaagatactatt +gact---------atcccgcccgtg----ctcatacttttgatgatttctgccctgagtgccgtaatc---t +tggcctgcagggctgtgctttccagtc--------cactatcgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-tct--ttt------gt +gccc-cct--------tc-taaa-tt-tt----gt-tc-tgtt----------------att-t-------c +ttt-tttc----t----------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444099.1/17255/1-7255 |Hepeviridae isolate HEPAC89, complete genome +--------------------------------------------------------------ggtcgatgc- +---catggaggcccaccagtttatcaaggctcctggcatcacaaccgccatcgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggttattcggccgtttttgtcccgtgtacagactgacattct +cattaatcttatgcagccccggcaactggtctttcgcccggaggttttttggaatcatcctattcaacgtgt +tatacacaatgagttagagcagta---ttgccgggccc-gcgcggggcgctgtcttgaggtcggagctcacc +caagatccattaatgataacccaaatatcttgcaccggtgcttcctccggcctgttggtagagacgtccagc +ggtggtactccgcccctacccgcggccctgctgctaactgccgccgctctgcgctgcgcggcctccctcccg +ttgaccgcacttattgctttgatgggttctctagttgtatgtttgcagccgagaccggtattgctctttact +ccctacatgacctgtggcctgctgatgttgcggaggcaatggcgcaccacgggatgtcacgcctgtacgccg +tattgcacctc-cctcctgaggttttgctgccacctggcacttaccacaccacctcctaccttctgattcat +gacggcagtcgcgccgtcgtaacttacgagggcgacactagtgctggttataaccatgatgtttccatcctc +cgcgcctggatccgcacgacaaaagtcaccggtgagcacccgctagtgatagagcgtgtccgtgcaattggc +tgccactttgtgctgctgctcactgctgcccctgagccatcgcccatgccctacgtcccttttccccgctct +acagaggtgtttgtccgctcgatatttggcccgggc---------ggttcgccctccctttttccgtcagca +t----------gctgtacaaaatcca-ccttccacgccgtccctgtgcatatctgggataggctcatgctct +tcggcgccacgctggatgatcaggccttctgctgctcgcggcttatgacttaccttcggggtattagttata +aagtcactgttggcaccctcgtcgccaacgagggttggaacgcctctgaggatgccctcactgcagtaatta +ccgcggcgtatctcaccatctgccaccagcgttacctccgcacccaggcgatctctaaaggtatgcgccggt +tggaggtcgagcacgcccagaagttcattaccaggctctatagctggttgtttgagaagtc---------cg +gccgcgactacatccctggccgccagctccagttttatgcgcagtgccggcgctggctttctgctggctttc +atttggacccccgagtgcttgtctttgacgagtctgtgcgctgc---cgttgtagaagtttgatgaagag-- +----tgtagcaagaaaggtttgttgtttcatgaagtggctcggtcagga------gtgtacctgttttttgg +----------------agccagcggaaggcctgctcggcgaccaaggt--------catgacaacgaggcct +atgaggggtctgaagtagaccccgctgagcccgcccctaccgatgtgtcaggcacttacactgtccatgggc +gactgttggtggacctatataaagcactcaacgtcccgcaagaaatagcagcccgggccgcccgtttgtcgg +ctactgtcgagcttgccgctggcccagggcggcttgagtgccgcaccatcctaggcaataagaccttccgta +ctacgttcactgacggcgcccaactggaggcaaatggccc------------------------cgagcagt +acgttctttcatttgatgaagaccgtcagtgcatgggtgctgggccgcatagtcttgtgtatgagctcaccc +cctctgggctgcaggttaaaattacatct-------aatggcttagattgcactgcagtcttccca---cct +gggaaggccccgagtgctggggccgcagaggttacggccttctgcagcgccttgyatagatacaacagaact +atccaacggcactcgattgttggcgggctgtggctacacccggaggggttgctaggtctcttcccgcccttc +tccccaggccacttttgggaatcyacgaatccgttctgcggtgagggaactctttacaccagaacttggtct +gagtccggcttttctagtgatttcctaccacctgaggcagtcgttagtgcccacccccccgttgac------ +-ctgccctatacaccggccccccttgaggttgacga-----------------tcgaggccc---------- +---------gtcactccct---------------------------------------------cctgttgc +ccccg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------------gcgctgttggcccgcccg-- +-tcggcacgcccggg-------------------------------------ccctttgctcataagctgcc +ggggccgtc--------------------------------------ttcagctcgcaatcgtcgcc----- +-------------------tcctttttacctatccagatggcgctaagatttattcagggtccctgtttgag +tcagattgtgactggctggttaatgcatctaaccccggccaccgtccgggaggcggcctctgtcatgccttt +taccagcgtttcccgcagtctt------ttgaccataccaaatttattatgcgagatgg---gctagccgca +tacactttgacacctcgcccgatcattcatgcggttgcccccgattatagagcagcacacaaccctaaaaga +ttggaagcagcgtaccgtgagacctgttctcgcctcggtactgccgcttacccgttgctgggctcaggcatc +taccaggtccctgtaggcccgagtttcgacgcttgggagcgaaaccaccgacctggtgatgaactttatctc +accgagcttgcgacagct-------------------------------------------------tggtt +tgaggccaacaagccggctcggtctctcacacccacaacacctgacacagcctcagctgattaccccgtagc +aggcgccggccttccgccagggaccgacaccggcccggtactgcccgccctgaccataacagaggatatagc +tc------------ggacggccaacctcgcattggaaattg------------actccaagaccgagctagg +ccgggcttgt---accggctgtattattagccctggggtagtccgctatcaatttactgcgggcgttcccgg +ttccggtaaatcgaggtctatacagcagggkgatgttgatgttgtggttgtgcccacccgcgagctccgtgg +tagttggcgccgccgcgggtttgctgcatttacaccccactcggccgcccgtgttaccggcggtcggcgtgt +cgtaattgatgaagcgccatctctcccgcctcatctgttattactgcatatgcagcgtgcctcatcagtgca +tcttctcggtgatcctaaccagattcctgcaattgactttgagcatgctggccttgtccccgcaatccgccc +tgagctcgcccccaccagctggtggcacgtcacgcaccggtgccccgcggacgtctgtgagcttatacgtgg +ggcgtaccccaagattcagactaccagccgtgtgctgaggtctctgttctggggtgac------ccccccgt +tggccagaagctggtcttcacgcaagccgcaaaggcagccaaccctggtgcgatcactgttcacgaggccca +gggagctacttttactgagaccactattatcgcgacggccgatgccagaggcctcatacagtcgtcccgggc +gcatgccatcgtcgcgctcacccgtcacacggagaagtgtgttattttggatgccccggggttgctccgcga +ggtgggcatatcggatgtgatagttaataacttc------------------------------tttttggc +tggcg--gtgagatcggtcatcaccgcccctctgttatacctcgcggtaaccccgatcgaaatcttgacac- +-----cctccaggccttccccccctcctgccagatcagcgccttccaccagctggctgaggagctcggtcac +cggcccgtgcccgtggcggctgtcctgccgccctgccctgagctcgagcagggcttgctctacatgccgcag +gagctcacagtgtctgacagtgtcttggtctttgagttaactgatatagttcattgccgtatggccgctccc +agccagcgcaaggccgtcctctccacgctcgttgggcgttacgggcgtcggacgaagttatatgaggctgcc +cactcggacgtgcgtgaatcgctcacaaggttcatccctaccattggcccagtgcaggccacgacgtgcgag +ctttatgagctggtcgaggcgatggtggagaaaggtcaggatgggtcagctgtgctcgagctcgacctttgt +agccgagatgtgtcccgaataacgttcttccagaaagactgtaacaagtttacaaccggggagacgattgcc +cacggcaaagtgggccaggggatatcagcttggagcaagaccttttgcgctttattcggcccctggttccga +gctatagagaaacagatactggccctgctcccgcctaacatcttctacggtgacgcttatgaggattctgtg +ttctctgccgctgtcactggtgcggggtcgagcatg---gtatttgagaatgatttttctgaattcgacagt +acccagaataatttctcact------------------tggccttgagtgtgtgattatggaagaatgtggc +atgccccaatggctagtcagattgtaccacttggtgcgatctgcctggattctacaggccccgaaggagtct +ctaaaaggtttttggaagaagcattcyggcgagcccggcacgttgctctggaataccgtttggaacatggcg +gttatagcccactgctatgaattccgcgatttcagggctgccgcgtttaaaggcgatgactcggtggttctt +tgcagtgattatcgtcagagtcgtttcgcggcggcactgatcgcaggctgtgggctcaagcttaaagtcgat +taccgccctgtcgggctttacgccggtgttgtggttgcccccggtctcggaacgttgcctgatgtcgtccgg +ttcgccgggcgactgtcagaaaagaattggggccctggccctgaaagggcggagcagttacgcttagccgtc +tgcgactttctgagaaagctgacgaacgttgctcaggtttgtgttgatgttgtgtctcgtg-------ttta +tggggtgagtcccgggcttgtacataaccttattggcatgctgcaaactatcgctgatggtaaggcccacta +tactgaaactgtgaagcccgttttggaccttacaaattctattgtgcagaggttggaatgaataacatgtt- +t----------------tctgcatcgcccatggg------------atcgccatgcgcactggggttgtact +gttgttgctcctcgtgtttctgcctatgttgcccgcgc---------------------------------- +-caccgg------ccggtcagtcgactggcc------------gccgtcgtgggcg-gcgcggcggcggttc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctattttcat---- +--------------ccaaccaaccccttcgccgctgacgttgactcacatcccgggtctggagccaagcccc +ggcaaccagcccg---------------cccccttggcacctcttggcgcgacctgtccca----------- +------gcgcccccccgctgccccgcgtcgtcgatctacccca---------actggggctgcgccgttgac +tgccgtttcacccgcacctgacacggcgcctgtcccggatgtcgattctcgcggggctatcttgcgccgcca +gtataacctctcaacctcgcctttaacctctactgttgcttcgggtactaatcttgttctgtatgccgcccc +gcttaaccccctcctgcccctccaggatggcactaacactcacatcatggcgactgaggcatccaattatgc +ccaataccgagttgtccgagccacaatccgttaccgacctttggtgcctaacgcagtcggcggttatgcaat +ctctatttctttctggccccagaccactaccacccctacctctgttgatatgaactcaattacttcaaccga +tgttaggattcttgtccaacccggcctagcctccgaacttgttataccaagtgagcgcctccactatcgcaa +tcaaggttggcgctccgtcgagacttccggtgtggctgaggaggaggctacttccgggcttgtcatgctttg +tatccatggttcccctgttaactcatatactaataccccctatacaggggcccttgggcttcttgactttgc +ccttgagattgaattccggaatttgactccaggcaacactaacacacgcatctcccgttataccagcaccgc +ccgccatcgcctgcgccgtggcgccgatgggaccgccgaacttacaactacggcggccacacggtttatgaa +agatctccatttca---ctgggatgaac---ggggttggtgaaattggccgtggcatagccctgacgctgtt +caatatagctgatacacttcttggcggtttgccgacagaattaatttcgtcggccgggggtcaggtattcta +ctcccgccctgtcgtctcagccaatggcgagccgactatcaagctatacacatcagttgagaatgcacagca +ggacaaggggatcgcaatacctcatgatattgacctaggcgattcccgtgttgtcatccaggactatgataa +ccaacatgagcaagaccggcctactccgtcaccggccccctctcgccccttttccgtcctccgcgctaacga +tgtgttgtgggtttc-----------------------------actgactgctgctgagtatgac------ +cagaccacatatggttcgtcgaccaaccctatgtatgtttcagatactgtgacatttgt---caacgtggca +acaggtgctcaggctgtcgcccgctctcttgattggtctaaagtaaccctggatgggcggccgcttaccacc +at-----ccagcagcactctaaaatattctatgtcc-tccccctccgtggcaagctttctttttgggaggcc +ggcaccaccaag--gctggctacccctataactataacaccacagccagcgaccaaatcttgattgagaatg +cagctgaccat------cgtgttgctgt-ttcgacttacactacgagcttggg--------------tgctg +gccctgtgtctatctc-ttcagtcggtgtgcttgccccgcactccgttctggctgttcttgaggatactgtt +gatt---------accccgcccgtg----ctcatacttttgatgacttctgccctgagtgccgtaccc---t +tggtctgcagggctgtgctttccagtc--------tactgttgctgagcttcagcgtct------------- +--------taagatgaaggtgggtaaaacccgggagtcttaattaa-tt----tt-tgct----------gt +gccc-tcct-------tc-tatg-ttgat---tgc-tt--------------------tatt-t-------c +ttatttct----gcg----------------gttc------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444100.1/17252/1-7252 |Hepeviridae isolate HEPAC84, complete genome +-----------ac-tactgagacat---------------aga-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggtccggccgtttttatcccgtgttcaaactgatatcct +tattaatttgatgcaacctcgacagcttgtgttccggcctgaagtcctctggaatcatccgatccagcgagt +tatacataatgagctggagcagta---ttgccgagccc-gcgccggccgttgtcttgaagtgggcgctcacc +caagatctattaatgataaccccaatgttttgcaccggtgctttctccgcccggttgggagagacgtccagc +gctggtattccgcccccacccgtggcccagcggctaactgccgccgttctgcgctacgcggcttgccccctg +tcgaccgcacgtattgcttcgacgggttctcccgctgcgcctttgccgctgaaaccgggatcgctttatact +cattgcatgacctttggccctcggatgtcgcggaggctatggctcgccacgggatgacgcgcttgtatgctg +ccctccattta-ccccctgaagttctgttaccacctggaacttaccacacaacctcctatcttttgatccac +gacggcaatcgcgccgtcgtgacttatgagggggataccagtgctggttataaccacgatgtgtctatactt +cgtgcatggattcgcaccactaaaatagttggtgaccatccgctggtaatagagagggtccgcgccatcggc +tgccattttgtcttactccttactgcagcccccgagccgtccccgatgccttatgtcccgtaccctcgttca +acagaggtgtacgttagatccatatttggtcctggt---------gggtcgccttctcttttcccatcagcc +t----------gctctaccaagtcta-cattccatgccgtcccggttcatatctgggaccggcttatgcttt +ttggtgccaccctagatgaccaggccttttgctgctcgcggcttatgacctacctccgcggaattagctata +aagtgaccgttggcgcacttgtcgccaacgaaggctggaacgcctcggaggatgcgctaaccgctgtgatca +ctgcagcatatttgactatctgtcatcagcgctacctacgaacacaggccatttctaaaggtatgcgtcgcc +tagaggttgagcacgcccaaaaatttatcacaaggctatatagctggctgtttgaaaagtc---------ag +gccgtgattacatccccggtcgccagctccaattttatgcgcagtgccgccgttggctctcggctggcttcc +atctggaccctagagtcctcgtctttgatgaggcggtcccctgc---cggtgccggagctttctaaagaa-- +----ggttgccgggaaattctgttgctttatgaagtggttggggcagga------gtgtacttgctttctgg +----------------agccagcagagggcctggttggtgactgtggc--------catgataacgaggcct +atgaggggtctgaggtggaccccgccgagcctgctcaccttgatgtttctgggacttacgcggtccatggtc +gtcagcttgaggccctatatagggcgcttaatatcccagatgacattgcagctcgtgcgtcacgtctgacgg +ctaccgttgagcttgccgccagtccaggcagactcgagtgccgcacggtgcttgggaacaagatcttccgta +catcaataactgatggtgcccatctcgaggccaacggccc------------------------tgagcagt +acgtcttgacatttgatgactctcgccaagtgatgggggctgggcctcacagcctcacgtatgaacttgtcc +ctgctggtctgcaggttaaaatatcttct-------aatggcctggattgtaccgctatatttcct---ccc +ggtggggcaccgagcgctgcaccaggtgaggtggcggctttctgcagcgccctatacaggtacaataggttc +acccagcgccattcgttgaccggtgggctgtggctgcaccctgaggggctccttggcctgttcccccctttt +tccccggggcatctttgggagtctgcaaaccccttctgcggtgagagcacactttatacacgaacttggtct +acatctggtttttctagtgacttttctccgcccgaggcggcttatgccgccccggtccccgatat----gag +gctaccctcgggtgctccctcctccgctagtgatat-----------------ctgggtgtt---------- +---------tccgccgccc----tctgaggggt--------------cggcgatcatttcgccacccataac +cccggtcggtaagccaactaa---------------------------------------tccgcc------ +------------------------------------------------------------------------ +-tggtcatac-------------------------------------------------------------- +-------------tatacct----aggccacctgcccgtgagccatctacaccaccattggccctaacccca +g---------------------------------------------ttagtaagccagctaacccgtctggc +cttactgcacccagg-------------------------------------cccctcgctcgtgaaccgcc +cacaccgcc--------------------------------------gtcagcccgtactcgtcggc----- +-------------------ttctttatacgtatcctgatggggccaaggtgtatgcaggttctttgtttgag +tcagattgttactggctggtcaatgcatctaaccctggccaccgtcctggtggtggtctttgccatgcattc +taccagcgttttccagagtcgt------ttcatcctaccgattttgttatgcgtgaggg---cctcgccgca +tatactttgagcccgcgtccaatcatccatgctgtggcccctgactacagggttgagcagaaccccaagagg +ctggaggcggcatatcgtgagacctgctcccgcctcggcacagctgcctatccgctactggggtcggggatt +taccaggtccctgtaggtctaagttttgacgcctgggagcgtaatcaccgcccgggcgatgaactttacctt +accgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagcctactca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacaccgc +cc------------gcacagctaaccttgcgcttgagatcg------------actccgctactgaagtagg +tcgtgcttgc---gccggctgtactatcaaccccgggattgtccactaccagttcaccgccggggtccctgg +ttccgggaagtctagrtctatacagcagggggatgtygatgttgtggtcgtgccaacccgtgagcttcgcaa +cagttggcggcgccgcggctttgctgctttcacgcctcatacagcagctcgtgtcactgccggccggcgtgt +ggtgatagatgaagcaccctctcttccaccgcacctgctgttgctccatatgcagcgagcctcaacagtcca +tcttcttggcgaccccaatcagatccctgccattgactttgagcacgccggtttggtcccggcgatccgccc +tgagctagcccctactagctggtggcatgtcacccaccgctgccccgctgatgtgtgtgagcttatacgcgg +ggcctacccaaagattcagacgaccagccgtgtgctgagatctttattctggaacgag------cctgcgat +aggtcagaagctggttttcacgcaggcagccaaggccgccaatcccggcgcaattaccgttcacgaggccca +gggggccacgtttactgagactaccatcatagccacggctgacgctagaggtcttattcaatcttcccgcgc +acatgctatcgttgcactcactcgccacacagaaaagtgcgttattcttgacgctcctggcctattgcgtga +ggtcggcatttctgatataattgttaataacttt------------------------------ttcctggc +tggtg--gtgaagtaggccaccatcgcccttctaccatcccccgcggcaacccagaccagaacttagatac- +-----cctccaagcgttccctccgtcctgtcaaatcagcgcttaccaccagttggctgaggagctgggccac +cggccggccccagtggccgccgtcctacccccctgccctgagcttgagcagggtttactctacatgccgcag +gagcttacggtgtccgatagtgtcctagtttttgaactcacggatatagttcactgtcgtatggcagccccc +agtcaacgtaaggcggttctttctacgctcgtcggcaggtacggccgccgaacgaagctgtatgaagcggcc +cattctgatgtccgcgagtctttgggtaggttcatccctactatcggaccggtccaggccaccacatgcgag +ctatatgagctggttgaggccatggtggagaagggccaggatggttcggctgtgcttgagcttgacctctgt +aatcgtgatgtctcgcgtattacatttttccagaaggattgtaataaatttacaacaggtgagaccattgcc +catggtaaggtgggccagggcatttcggcatggagtaaaaccttttgtgctttattcggcccatggttccgt +gccattgagaaggagattctggctctgctcccacccaatattttctatggtgatgcctatgaggagtcggtg +ttctctgcagccatttctggggctggctccagtatg---gtttttgagaatgacttttctgagtttgacagc +acccaaaataatttctctct------------------tggccttgagtgcgttattatggaggagtgtggc +atgccccaatggcttatccgactgtaccacttagttagatcagcctggattctgcaagccccgaaagagtct +ttgaaaggattctggaagaagcaytcyggcgagccyggcactctcctttggaacaccgtctggaacatggct +atcatagcacactgctatgaattccgtgacctgagagtggcagcgtttaaaggggatgattcaatggttctt +tgcagcgattaccgtcagagccacaatgcggccactctgatagctggttgtgggttgaaattgaaggttgat +taccggcctataggtctgtatgccggcgttgtagtggctccgggcctcggggcacttcctgatgttgtccgc +tttgcaggtcgattatctgaaaagaattggggtccgggccccgagcgcgccgaacagttgcgcctagcagtt +tgtgattttcttcgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggttggtgcataatcttattggcatgctacagactattgctgatggaaaggcccattt +cactgagactgttaagcctgtgctggatctcacaaattctatcatacagaggttagaatgaataacatgtt- +c----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcgcaatccggggctggagctcgcccta +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgttaac +tgctgtctcaccagcgcctgatacggccccagtccctgatgttgattctcgtggcgctatcctgcgccgtca +gtataatctgtccacctctcctttaacttcatctgttgcttctggaactaatcttgtcttgtatgctgcccc +gcttaaccctcttttgcccctccaggacggcaccaacacccacatcatggcgactgaggcgtcaaattacgc +tcagtaccgggttgtccgggctacaatccgctatcgccccttggtgccgaatgccgtcggtggttatgcaat +ttctatttctttctggcctcagactacaactacacccacctctgttgatatgaactccattacttctactga +tgttaggattctagtccagcctggcatagcctcggagttggtcatcccgagcgagcgccttcactatcgtaa +tcaaggttggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggcttggtcatgctttg +tattcatggctcccctgttaattcttataccaacacgccctatactggggcattggggctcctcgattttgc +actcgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgttataccagtacagc +ccggcaccgcctgcgtcgcggtgctgatgggacagctgagctcacaaccactgcagccactcgtttcatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggtgaggtgggtcgtggtatagccctaactttatt +taaccttgctgatacacttctcggtgggttgccgacagaattgatttcgtcggctggaggtcaactgtttta +ctcccgcccggttgtctcggccaatggcgagccaactgttaagttatacacctctgtcgagaatgcacagca +ggataagggtattgctataccacacgatatagatttaggggattcccgtgtggttatacaagactatgacaa +ccaacatgaacaggaccgacctaccccgtcgccggccccatcccgtcccttttcagtccttcgagccaatga +tgtcctgtggctctc-----------------------------tctgactgcagctgaatacgac------ +cagactacttatggctcatcaactaaccctatgtatgtttcagatactgtcacatttgt---taatgtggcg +acaggcgcccaggctgttgcccgatcccttgattggtccaaggtcactttggatggccggccacttactacc +at-----tcagcagtactccaaaacgttttatgtgc-tgccgcttcgtggtaagctttccttttgggaagct +ggtacgactaag--gccggctacccttacaattacaatactactgctagtgaccagattctgattgagaatg +cagccggccac------cgtgttgctat-atctacttatactactagtctcgg--------------cgccg +gccctgtgtctgtttc-tgcagtcggcgttcttgctccgcactctgctttagctgtgcttgaagacactatc +gatt---------atcccgcccgtg----cccatacttttgatgatttctgccctgagtgccgcaacc---t +tggcctgcagggctgtgctttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444101.1/17211/1-7211 |Hepeviridae isolate HEPAC58, complete genome +--------------------------------------------------------------ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatcccgtgttcaaactgacatcct +tataaacctgatgcaaccccggcagcttgtatttcggcctgaagtcctctggaatcacccgatccagcgagt +tatacataacgagctggagcaata---ctgccgagccc-gcgctggtcgttgccttgaggtgggcgctcacc +caaggtctattaatgacaacccmaatgttctgcaccggtgctttctccgcccggttgggagagacgtccaac +gctggtactctgcccccacccgtggtccagcggctaattgccgccgttctgcgctacgcggtttgccccctg +tcgatcgcacatactgctttgacgggttctcccgctgcgcctttgccgctgagaccggtatcgctttatact +cactgcatgatctttggccctcggatgttgctgaggctatggcccgccacgggatgacgcgtttgtatgctg +cccttcatctm-ccccctgaggtcctgttaccacccgggacttaccacacaacctcctatcttctgatccat +gacggcaaccgtgccgtcgtgacttatgagggggataccagtgcgggttataaccacgatgtgtctatactt +cgtgcatggatccgcaccactaaaatagttggtgatcacccactggtaatagagagggttcgcgccattggc +tgccattttgtcctgctccttactgcagcccccgagccgtcyccaatgccttatgtcccgtaccctcgctca +acagaggtgtatgttagatccatatttggccctggt---------gggtcgccttctcttttcccgtcagcc +t----------gctccaccaaatcta-cattccatgctgttccggttcatatttgggaccggcttatgcttt +ttggtgccaccttagatgaccaggccttctgctgctcgcggcttatgacctatctccgcgggattagttata +aagtgactgttggcgcacttgtcgccaatgagggctggaatgcctcggaggatgcgctcaccgccgtgatta +ccgcagcatacttgaccatctgtcatcagcgctacctacgaacacaggccatttctaaaggcatgcgtcggc +tagaggttgagcatgcycaaaagtttatcacaaggttatacagctggctgtttgaaaagtc---------gg +gccgtgattatatccctggccgccagctcgagttttatgcacagtgccgccgttggctttcagctggcttcc +atctggaccctagagtccttgtctttgacgaggcggtcccctgc---cgctgccggagtttcttaaagaa-- +----ggctgccggaagattttgctgttttatgaaatggttggggcagga------gtgcacttgctttctcg +----------------agccagctgaaggcctggttggcgactgtggc--------catgacaatgaggcct +acgaagggtctgaggtggaccccgccgagcctgcccatcttgatgtttctgggacctatgcggtccatggcc +gtcagcttgaggctctatatagagcgcttaatatcccggatgacattgtggctcgtgcgtcacgcctgacgg +ccactgtggaacttgccgccagcccaggccgactcgagtgtcgtacggtgcttgggaacaagacctttcgta +catcaataactgacggtgctcaccttgaggccaacggtcc------------------------cgagcagt +atgtcttaacatttgatgattctcgccaggcaatgggggctgggcctcactgcctcacgtacgaacttgtcc +ctgccggtctgcaggttaaaatatcttct-------aatggcctggaatgtgccgctatattccca---cct +ggtggggcgccaagtgccgcaccaggtgaagtggcggctttttgcagtgccttatataggtacaataggttc +acccagcgccattcactgaccggtgggttgtggctgcaccctgaggggcttcttggcctgttcccccctttc +tccccggggcatctttgggagtctgcaaaccccttttgcggcgagagcacactctatacacgaacttggtct +acgtctggcttttctagcgacttctccccacccgaggtggctcatgccgcccyagttcttgacgt----tgg +gctaccctcgggtgctccttcatctgccagtgatgt-----------------ttgggtgct---------- +---------cccaccgccc----tctgagggtt--------------cggcggttgctccgtcacccgaaac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtaagtcagctagcccgcctact +cttactacaactagg-------------------------------------ccctctgcccgtaagccacc +tacaccacc--------------------------------------acctgctcgcactcgccggc----- +-------------------tcctttatacatatcctgacggggccaaggtgtatgcaggctctttgtttgaa +tcagattgtgactggctggttaatgcatctaatcccggtcaccgccctggcggtggtctctgccatgcattt +tatcagcgctttccggagtcat------tctatccgactgattttgtcatgcgtgaggg---tcttgccgca +tacactttgagcccgcgtccgatcattcacgctgtggcccccgactacagggttgagcagaaccccaagagg +ctagaggcggcatatcgcgagacctgctcccgcctcggcacagctgcctacccgttactggggtcggggatt +taccaggtgccagtaggtttaagctttgacgcctgggagcgtaaccaccgccctggcgatgaactttatctt +actgagccggctgctgcc-------------------------------------------------tggtt +cgaggccaataagccaactca--------------------------------------------------- +------------------------------------------gccagctctaacaatcactgaggacactgc +cc------------gcacagccaaccttgcgctcgagatcg------------actccgctaccgaggttgg +ccgtgcctgc---gccggctgtactattagccccgggattgtccattaccagtttaccgccggggtccctgg +ctctsggaagtctaggtctatacagcagggggatgttgatgttgtggtcgtgccaacccgtgagcttcgtaa +cagttggcggcgccgcggctttgctgcttttacaccccacacagcagcccgtgttactgccggtcggcgtgt +ggtgatagacgaggcaccttcgcttccgccgcacttactgttgctccatatgcagcgggcctcatcggtcca +tctcctcggtgaccccaaccagatccctgctattgactttgagcatgccggcttggtcccagcgattcgccc +tgagctagcccccactagctggtggcacgtcacccatcgctgccccgccgatgtgtgtgagctgatacgtgg +ggcttacccaaagatccagacgaccagccgtgtgttgcggtccttattctggaatgag------ccagcagt +gggccagaggctggtcttcacgcaggcagccaaggcggctaaccccggtgcgattaccgtccatgaggccca +gggcgccacgttcacggaaactaccatcatagccacggccgatgctagaggtcttattcaatcatcccgtgc +acatgctatcgttgcacttacccgccatacagaaaaatgcgtcattctcgacgctcccggcctgctgcgtga +ggtcggcatttctgacataattgttaataatttc------------------------------ttcctggc +tggtg--gcgaagtgggtcatcaccgcccttctaccataccccgcggtaatccagaccagaacctagacac- +-----tctacgggcattccccccctcctgccaaattagtgcctaccaccagctggctgaggagctgggccac +cggccggccccagtggccgccgtcctgcccccttgccctgagcttgagcaagggctactctacatgccgcag +gagcttacggtgtccgacagcgtcctagtttttgaacttacggacatagttcactgccgtatggctgccccc +agtcaacgtaaggcagtcctttcgacgctcgttggtaggtacggccgccgaacgaagctgtatgaggcggcc +cactctgatgtccgcgagtctctaggtaggtttatccccaccattggcccggtccaagccaccacgtgcgag +ctatatgagctggtcgaggctatggtggagaagggtcaagacggctccgccgtgctcgagctcgacctctgt +aaccgcgatgtctcgcgtattacattcttccagaaggattgtaataaatttacaacaggtgagactattgcc +cacggtaaggttggccagggcatttcggcctggagtaagaccttttgtgctctattcggcccgtggttccgt +gccatcgagaaggagattctgaccttgctcccacccaacattttttatggtgatgcctacgaggagtcagtg +ttttctgcagccatctctggggccggctccagtatg---gttttcgagaatgatttctctgagtttgatagc +acccaaaataatttttctct------------------tggccttgagtgtgttattatggaggagtgtggc +atgccacagtggcttattcgactgtatcatttagttaggtcagcctggattctgcaagccccgaaagagtct +ttgaaaggcttctggaagaagcattctggcgagcctggtactctcctttggaacaccgtctggaacatggcg +atcatagcacactgctatgaattccgtgacttgagagtggcagcgttcaagggggacgattcagtggttctt +tgcagtgactaccgccagagccgcaatgcggccaccctgatagccggttgcgggttgaaattgaaggttgat +taccggcctattggtttgtatgccggcgttgtagtggccccgggcctcggggcactccctgatgttgtccgg +tttgccggtcgattatctgagaagaactggggcccgggtcccgagcgcgccgaacagttgcgcttagctgtt +tgtgattttcttcgagggttaacgaatgtcgcgcaggtttgtgttgatgttgtgtcccgcg-------tcta +cggggttagccccgggctggtgcataaccttattggcatgctacagactattgctgatggaaaggcccactt +tactgagactgtcaagcctgtgctggaccttacaaactctatcatacagaggttggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaacccggggttggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgtctcccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtctcaccggcgcctgatacggccccagtccctgatgttgactctcgtggcgctattttgcgccgcca +gtataatttgtccacctcccctttgacttcatctgtcgcctctggaactaatcttgttttgtacgccgcccc +gcttaatcctctcctgcccctccaagacggcactaatactcatatcatggcgactgaggcatctaattatgc +tcagtaccgggttgtccgggctacaatccgctaccgccctttggtgccgaatgccgtcggtggttatgcaat +ttctatttccttctggcctcagaccacaactacacccacctctgttgatatgaattctattacctctactga +tgttaggattttagtccaacctggcatagcttctgagctggttatcccgagtgaacgccttcactatcgtaa +tcaaggttggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggcttggttatgctttg +tattcatggatcccctgttaattcctataccaacacgccctatactggggcattggggctcctcgactttgc +acttgagcttgaattcagaaatttgacccctgggaatactaacacccgtgtgtcccgttacactagcacagc +ccgacaccgcctgcgccgtggcgccgatgggacagccgagcttacgactaccgctgccacacgtttcatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggcgaggtcggccgtggtatagccctgacgctatt +caatcttgctgacacacttctcggcgggctgccgacagaattgatttcgtcggctggaggtcaactgtttta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatatacctctgtcgagaatgcacagca +ggacaagggcattgctataccacatgatatagacctgggggactcccgtgtggttatacaagactatgataa +ccaacatgagcaggaccggcctaccccgtcgccggccccgtctcgccctttctcagtccttcgagccaatga +tgtcctgtggctttc-----------------------------tttgactgcggctgaatatgat------ +cagaccacttatggctcgtcgaccaaccccatgtatgtttcagatactgtcacatttgt---taatgtggct +acgggtgcccaggctgttgcccgttcccttgattggtctaaggtcactttggacggccggccactcaccacc +at-----ccagcagtattccaagacattctatgtgc-taccgcttcgcggtaagctttccttttgggaggct +ggtacgactaag--gctggctacccttataattataatactactgctagtgaccagattttgattgagaatg +cagccggtcac------cgtgttgccat-atctacttatactactagtctcgg--------------tgccg +gccctgtgtctgtttc-tgcagtcggcgttcttgctccgcactctgctctagctgtgcttgaggacacagtt +gact---------atcctgcccgtg----cccatacttttgatgacttctgccctgagtgccgtaatc---t +cggcttgcagggctgcgctttccagtc--------tactattgctgagcttcagcgcct------------- +--------taaaatgaaggtaggtaagacccgggagttctaattaa-tt----tc-ccc--ctc------gt +gccc-cct--------tc-taaa-ct-tc----gc-tc-tgt----------------tatt-t-------c +ttttttct----gcg----------------ttccccgctccc----------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444102.1/17260/1-7260 |Hepeviridae isolate HEPAC22, complete genome +-------------------------tgtg--cgcgc-gacgag-------------c----tggtcgatgc- +---catggaggcccaccagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggtccggccgttcttatcccgtgctcaaactgacatcct +tattaatctgatgcaaccccggcagcttgtgttccgacctgaggtcctttggaatcatccgatccagcgagt +tattcataacgaactggagcaata---ctgccgagccc-gtgctggccgctgtcttgaggtgggtgctcacc +caagatccattaatgataaccccaatgttctgcaccggtgttttctccgcccggtaggaagagacgtccagc +gctggtactctgcccccactcgtggtccagcggccaattgtcgccgttctgcgctacgcggcctgccacctg +tcgatcgcacgtattgcttcgacgggttttcccgctgcgcctttgccgctgagaccgggatcgctttatact +cactacatgacctttggccctcggacgttgcggaggctatggcccgccacgggatgacgcgcttgtacgcgg +ccctccattta-ccccctgaggtcctgctaccacctggtacttaccatacaacctcctatcttctgattcac +gacggcaatcgtgccgtcgtgacttatgagggtgatactagtgcgggctataaccacgatgtgtccatactt +cgtgcatggatccgtaccactaaaatagttggcgaccatccactggtaatagagagggtccgcgccattggc +tgccactttgtcctacttcttactgcagcccccgagccatccccaatgccttatgttccgtaccctcgctct +acggaggtctatgttagatccatatttggccccggt---------gggtcaccttctctttttccgtcagcc +t----------gctctaccaaatcta-cattccatgctgttccggttcatatttgggaccggcttatgcttt +ttggtgccaccctagatgatcaggccttctgctgctcgcgacttatgacctatctccgcgggattagctata +aagtaactgttggcgcacttgttgccaacgagggttggaatgcctcggaggatgcgctcaccgctgtgatca +ctgcagcgtacttgaccatttgtcatcagcgctacctacgaacacaggccatttctaaaggcatgcgccggc +tggaggttgagcatgcccaaaaatttattacaaggttatatagctggctgtttgaaaagtc---------ag +gccgtgattacatccccggtcgccagctccagttttatgcacagtgccgccgctggctctcggctggctttc +acctggaccctagagttcttgtttttgacgaggcggtcccctgc---cgttgccggagttttctaaagaa-- +----ggctgccggtaaattttgctgttttatgaaatggttggggcagga------gtgcacctgctttctgg +----------------agccagcagaaggcctggtcggcgactgcggc--------catgataacgaggcct +atgaaggttccgaggtggaccccgctgagcctgctcatcttgatgtttccggtacctatgcggtccacggcc +gacagcttgaggctctatatagagcgcttaatataccagatgacattgcggctcgtgcgtcacgtctgactg +ctactgtggaacttgccgccagccctggccgactcgagtgccgcacggtgcttgggaataaggcctttcgca +catcaataactgatggtgcccacctcgaagctaacggtcc------------------------cgagcagt +acgtcttgacattcgacgattctcgccaggcaatgggggccgggcctcacagtctcacgtatgaacttgtcc +ccgccggtctgcaggttaaaatatcttct-------aatggcctggactgtaccgctatattcccc---cct +ggtggggcgccaagcgctgcaccaggtgaagtggcggctttctgtagcgccctatatagatacaataggttc +acccagcgccattcgctgactggtgggctgtggctgcaccctgaggggctccttggcctgttcccccctttc +tccccggggcatctctgggagtctgcaaaccccttttgcggtgagagcacactttatacacgaacttggtct +acatctggtttttctagcgacttctccccacctgaggcagctcatgccgccctagtccctgatgt----agg +gctgccttcgggcaccccctcgtctgccggtgacgt-----------------ctgggtgtt---------- +---------tccaccgccc----tctgaggggt--------------cgacgattgccccgccacccgaaac +tcctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtaattcgattaacccacttagt +cttattacacctaag-------------------------------------ccccccgtccgtaagccgcc +cacaccacc--------------------------------------accggcccgtacccgccggc----- +-------------------tcctttacacatatcctgacggggccaaggtgtatgcaggctccttgtttgaa +tcagattgcgattggctggttaatgcgtccaaccctggtcaccgcccaggtggtggtctttgccatgcattt +taccagcgtttcccggagtcgt------tttatccggctgattttgtcatgcgtgaagg---tctcgccgca +tacactttgagcccgcgtccgattattcatgctgtggcccctgattacagggtcgagcagaatcccaagagg +ctagaagcggcatatcgtgaaacctgctcccgccttggtacagctgcctacccgctactggggtccgggatt +taccaggtccctgttggcttaagcttcgacgcctgggagcgtaaccaccgcccaggcgatgaactctatctt +actgagccggctgccgcc-------------------------------------------------tggtt +tgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaatcactgaggataccgc +cc------------gcacagctaaccttgcgcttgaaattg------------actctgctactgaggtggg +tcgtgcttgt---gccggctgcactgtcaaccctgggattgtccattaccggtttactgccggggttcctgg +ctccgggaagtctaggtccatacagcagggggatgttgatgttgttgtcgtaccgactcgtgagctccgtaa +tagttggcgacgtcgcggctttgctgcttttacaccccacacagcggctcgtgttactgccggccggcgtgt +ggtgatagatgaggcaccctcgcttccaccgcacctactgttgcttcatatgcagcgagcctcatcggtcca +tcttcttggcgaccctaaccagatccctgctattgattttgagcatgccggtttggtcccagcgatccgccc +tgagcttgcccctactagttggtggcacgttacccatcgctgccccgctgatgtgtgtgagctcatacgcgg +ggcttacccaaagattcagacgaccagtcgtgtgctgcgatccttattttggaatgag------cctgcagt +gggtcagaggctggttttcacgcaggcagccaaggcagccaaccccggtgcgatcactgttcacgaggccca +aggtgctacgtttacggagactaccatcatagccacagccgatgctagaggtcttatccagtcttcccgcgc +acatgctatcgttgcacttactcgccatactgaaaaatgcgtcattctcgacgcccctggcctacttcgcga +ggttggcatttctgatataattgttaacaacttt------------------------------ttcctggc +tggcg--gtgaagtgggtcaccatcgcccctctaccatacctcgcggcaatccagaccagaacttggacac- +-----cctacgagcattccccccgtcctgccaaatcagtgcctaccaccagctggccgaggagctgggccac +cggccggccccagtagccgctgtcctgcccccttgccctgagcttgagcaggggctactctacatgccgcag +gagcttacagtgtccgatagcgtcctaatttttgaacttacggacattgttcactgtcgcatggccgccccc +agtcaacgtaaggcggtcctttcgacgctcgtcggtaggtacggccgccgaactaagctgtatgaagcggcc +cattctgacgtccgcgagtctttggggaagttcatccctactatcggaccggtccaagccactacttgcgag +ctatatgagctggttgaggctatggtggagaagggccaggatggctccgccgtgctcgagcttgacctctgt +agtcgagatgtctcgcgtattacattctttcagaaggattgtaataaatttacaacaggtgagaccattgcc +cacggcaaggtaggccagggcatttcggcttggagtaaaaccttttgtgctttatttggcccgtggttccgc +gccattgagaaggagatactggctctgctcccgcccaacatcttctatggcgatgcctatgaagagtcagtg +ttttccgcagccatttccggggctggctctagtatg---gtttttgagaatgatttttctgagtttgatagt +acccaaaacaatttttctct------------------tggtctcgaatgcgtcattatggaagagtgtggc +atgccccaatggcttatccgattgtatcatttagtcagatcagcctggaccctgcaagccccgaaggagtct +ttgaaaggcttttggaagaagcattctggygagcctggcactctcctctggaacaccgtctggaatatggcg +atcatagcgcattgctatgaattccgtgacatgagagtggcagcgtttaaaggggatgattcagtggttctt +tgcagtgattaccgccagagccgcaatgctgccaccctgatagccggttgcgggttgaaattgaaggttgat +taccggcctataggtttgtatgccggcgttgtagtggccccgggccttggggcacttcctgatgttgttcgg +tttgccggtcgattatctgagaaaaactggggcccgggtcctgaccgcgccgaacagttgcgcctggcagtc +tgtgattttcttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +cggggttagccccgggctggtgcataaccttattggcatgctacagactatcgctgatggaaaggcccactt +tactgaaactgtcaagcccgtgctggatcttacaaattccatcatacagaggttggaatgaataacatgtt- +c----------------tgtgcatcgcccatggg------------atcgccatgtgccctagggctgttct +gctgctgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgctgacgtcgtatcacaacccggggttggagctcgctctc +gacaaccgacccg---------------ccccctcggttcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgtcccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtctcgccagcgcctgacacggctccagtccctgatgttgactctcgcggtgccattttgcgccgcca +gtataatttatccacctctcctttaacctcatctgttgcttctggaactaatcttgtcttgtatgcagcccc +gcttaatcctctcctgcccctccaagacggtactaatactcacatcatggcgactgaggcgtctaattacgc +tcagtatcgggttgtccgggctacaatccgctatcgccctttggtgccgaatgccgtcggtggttacgcaat +ttctatttccttctggcctcagaccacaaccacacccacctctgtcgatatgaattctatcacttctactga +tgtcaggatattagtccagcctggcatagcctccgagttggtcatcccgagtgagcgccttcattatcgcaa +tcaaggttggcgctctgtcgagacatcaggtgtggccgaggaggaggcgacatcaggcttggttatgctttg +cattcatggttcccctgttaattcctataccaacacgccctatactggggcattggggcttctcgactttgc +acttgagcttgaatttagaaatttaacccctgggaacactaacacccgtgtgtcccgttacactagcacagc +ccgacaccgtctgcgtcgtggtgccgatgggacagccgagcttacaaccactgcggccacacgtttcatgaa +ggacttgcatttca---ccgggacgaac---ggtgttggcgaggtgggtcgcggtatagccctaacgttatt +caatcttgctgatacacttctcggcgggctgccgacagaattgatttcgtcggctggaggacagctgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggcatcgctataccacacgatatagatttaggggattcccgtgtggttatacaagactatgacaa +ccaacatgaacaggaccggcctaccccctcgccggccccgtcccgccccttttcggtccttcgagccaatga +tgtcctgtggctctc-----------------------------tctgactgcagctgaatacgat------ +cagacaacttatggctcttctaccaatcctatgtatgtttcagatactgtcacactcgt---taatgttgcg +acaggtgctcaggctgttgcccgttcccttgattggtctaaggtcactctggatggccggccactcactacc +at-----ccagcagtactccaagacattctatgtgc-tgccgcttcgtggtaagctttccttctgggaagct +ggctcraccaag--gccggctacccttataattataatactactgctagtgaccagattttgatcgagaatg +cagctggtcac------cgtgttgccat-atctacttacaccactagtctcgg--------------tgccg +gccctgtgtccgtctc-tgcggtcggtgttcttgccccgcgctctgctttagctgtgcttgaagatactatt +gatt---------atcccgctcgtg----cccatacttttgatgatttctgccctgagtgccgtaatc---t +cggcttgcagggttgtgcctttcagtc--------tactgttgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagtcctaattaa-tt----ct-cctt----------gt +accc-cct--------tc-taga-ct-tt----gt-tt-atgg---------------tatttt-------c +tttttttct---gagt--------------ttcccccgccccccc---------------------gcaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------aaga-------------------------- +------------------------------------------------------------------------ +----------- +>MF444104.1/17168/1-7168 |Hepeviridae isolate HEPAC71, complete genome +--------------------------------------------------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgctttggcgaatgctgtggtggttcggccgtttttatcccgtgtccaaactgatatcct +tattaacttgatgcaaccccggcaacttgttttccgacctgaagtcctctggaaccatccgatccagcgagt +tatacataatgagctggagcagta---ctgccgagccc-gagctggtcgctgccttgaggtgggcgctcacc +caagatccatcaatgataatcccaacgttctgcaccggtgctttctccgtccggttggaagagacgtccagc +gctggtattctgcccccactcgtggcccagcggccaactgccgccgttccgcgctacgtggcctgccccctg +tcgatcgcacatactgtttcgacgggttttcccgttgcgcctttgctgctgagaccgggatcgctttatact +cactgcacgatctttggccctcggacgtcgcggaggctatggctcgtcatgggatgacgcgtttgtacgctg +ccctccatcta-ccccctgaggtcctattaccacctggcacttatcacacaacctcctatcttctgattcac +gatggcagtcgtgccgtcgtgacttatgagggggataccagtgcgggctataaccacgatgtatccatactt +cgtgcatggatccgcaccactaaaatagttggtgatcacccactggtaatagagagggttcgcgccatcggc +tgccattttgttctactccttactgcagcccccgagccatccccaatgccttatgttccgtaccctcgctca +acagaggtgtacgtcagatccatatttggccctggc---------gggtcgccttctcttttcccatcagcc +t----------gctctactaaatcta-cattccatgctgttccggttcatatttgggaccggcttatgcttt +ttggtgccaccttagatgatcaggctttctgctgctcgcggcttatgacctatctccgcgggattagctata +aagtgaccgttggcgcactcgtcgccaacgagggctggaatgcctcggaggatgcgcttactgctgtgatta +ccgcagcgtacttgactatctgccatcagcgctacctacgaacacaggccatttccaaaggcatgcgtcggc +tagaggttgagcatgcccaaaagtttatcacaaggttatacagctggctgtttgagaagtc---------ag +gccgcgattacatccccggccgccagctcgagttttatgcacagtgccgccgttggctctcagctggttttc +atctggaccctagggttcttgtctttgatgaggcggtcccctgc---cgctgccggagtttcttaaagaa-- +----ggtagccggaaaattttgttgtttcatgaaatggttggggcagga------gtgtacctgctttctgg +----------------agccagcggagggcctggttggtgactgcggc--------catgataatgaggcct +atgagggatctgaggtggaccccgccgagcctgctcaccttgatgtctccggtacctatgcggtccatggcc +gtcagcttgaggctttatatagagcgcttaatattccagatgatattgcggctcgtgcgtcacgcctgacgg +ctactgtggaacttgccgccagcccaggacgactcgagtgccgcacggtgcttgggaataagacctttcgca +catcaataactgatggtgcccacctcgaggccaatggccc------------------------cgagcagt +acgtcttgacatttgatgattctcgccaggtaatgggggctgggcctcacagccttacgtatgaacttgttc +ctgccggtctgcaggttaaagtatcttct-------aatggcttggattgtaccgctatattcccc---cct +ggtggagcgccaagcgctgcaccaggtgaggtggcggctttttgtagtgccctatataggtacaatagattc +acccagtgccattcgctgaccggcgggctctggctacacccggaggggctccttggcttgttcccccctttt +tccccggggcatctttgggagtctgcaaaccccttttgcggtgagagcacactttatacacgaacttggtct +acatctggtttttctagtgatttttccccgcccgaggcggcttatgccgccacagtccctgacgt----agg +gttaccctcgggtgccccctcgtctactagtgatgt-----------------cygggtgtt---------- +---------cccaccgctc----tcagaggggt--------------cggtaattgtttcgccacccgaaac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tyagtaagctgactaatccacctagt +cttacagcacctaag-------------------------------------ccccctgcccgtaagccacc +tacaccacc--------------------------------------accagctcgcactcgccggc----- +-------------------tcctttatacatatcctgatggggccaaggtgtatgcaggttctttgtttgag +tcagattgtgattggctggttaatgcgtctaaccctggccaccgccctggcggtggcctctgccacgcattt +taccagcgtttcccggagtcgt------tccacccgactgattttgtcatgcgtgaagg---tctcgccgca +tacactttgagcccgcgtccgatcatccatgctgtggcccccgattacagggttgagcaaaaccccaagagg +cttgaggcggcatatcgcgagacctgctcccgcctcggcacagctgcctacccgttactggggtcggggatt +tatcaggtgcccgtgggcttaagctttgatgcctgggagcgtaaccaccgtccaggcgacgaactatacctt +accgaaccggctgccgcc-------------------------------------------------tggtt +cgaggccaataagccaaccca--------------------------------------------------- +------------------------------------------gccggccctagtgatcactgaggacaccgc +tc------------gtacagccaacctcgcgcttgagatcg------------actccgctactgaggtggg +tcgtgcttgt---gctggctgtactgttaatcccggaactgtccattaccagtttaccgccggggtccctgg +ctccgggcacactgagtccatacagcagggggatgttgatgttgtggtagtgccaactcgtgagcttcgcaa +cagttggcgacgccgcggctttgctgcttttacaccccacacagcagctcgtgttactgccggccggcgtgt +ggtgatagatgaggcaccttcgcttcccccgcacttgttgctgctccatatgcagcgggcctcatcggtcca +tcttcttggtgaccccaaccagatccctgccattgactttgagcatgccggtttagtcccagcgattcgccc +tgagcttgcccctactagctggtggcatgtcacccatcggtgccccgccgatgtgtgcgagctcatacgcgg +ggcttacccaaagattcagacgaccagccgtgtgctgcgatcgttattttggaatgaa------cctgcggt +gggtcagaggctagttttcacgcaggcagccaaggcggccaaccccggtgcaattaccgttcatgaggccca +gggtgccacatttacggagaccactatcatagccacagccgatgccagaggtcttatccaatcttcccgtgc +tcacgccattgttgcacttactcgtcatacagaaaaatgcgtcattcttgacgctcccggcctactgcgtga +ggtcggcatttctgatataattgttaataacttt------------------------------ttcctggc +tggtg--gtgaagtgggccaccaccgcccttccaccataccccgcggcaacccagaccagaacttagacac- +-----cctgcaggcattccccccatcctgccaaattagtgcctaccaccagctggctgaggagcttggtcac +cggccggccccagtggccgccgtcctgcccccctgccctgagcttgagcaggggctactctacatgccgcag +gagcttacggtgtccgacagcgtcctaatttttgaactcacggacatagttcattgccgcatggccgccccc +agccaacgtaaggcggtcctttcgacgctcgtcggtaggtacggccgccgaacgaagctgtatgaagcggcc +cattctgatgttcgcgagtctttagggaggttcatccccactattggaccggttcaggccaccacgtgtgag +ctgtatgagctggttgaggctatggtagagaagggccaggatggctccgccgtgctcgagcttgacctctgc +agccgtgatgtctcgcgtattacatttttccaaaaggattgcaataaatttacaacaggtgagactattgcc +cacggcaaggtgggccagggcatttcggcttggagtaagaccttctgtgctctattcggtccgtggttccgc +gccattgagaaggaaattctggccctgctcccacccaacattttctacggcgatgcctatgaggagtcagta +ttctctgcagccatttctggggctggctccagtatg---gtttttgagaacgacttttctgagtttgatagc +acccaaaacaatttttctct------------------tggccttgagtgtgttattatggaggagtgtggc +atgcctcagtggcttatccgattgtatcatttagttaggtcagcctggaccctgcaagccccgaaagagtct +ttgaaaggtttttggaagaagcactctggcgagcctggtactctcctttggaacaccgtttggaacatggcg +atcatagcacactgctatgaattccgtgacttgagagtggcagcgtttaagggggacgattcagtggttctt +tgcagtgattaccgccagagccgcaatgcggctaccttgatagccggctgcgggttgaaattgaaggttgat +taccggcctataggtttgtatgccggcgttgtggtggctccgggccttggggcactccctgatgttgtccgg +tttgccggtcgattatctgagaagaactggggccctggccccgagcgtgctgaacagttgcgcctagcagtc +tgtgatttccttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtctcgcg-------tcta +tggggttagccccgggctggtgcataaccttattggcatgctacagactattgctgatggaaaggcccattt +cactgagactgtcaagcctgtgctggatcttacaaattctatcatacagaggttggaatgaataacatgtt- +c----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgtttt +gttgctgctcctcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgccgatgtcgtatcacaacccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctccctcccgccgtcgatctacccca---------actggggctgcgccgctaac +tgctgtctcaccagcgcctgatacggccccggttcctgatgttgattctcgcggcgctattctgcgccgcca +gtataatttgtctacttctcctttaacttcgtctgttgcctctggaactaatcttgtcttgtatgccgcccc +gcttaaccctctcttgcctctccaagacggcactaatactcacatcatggcgactgaggcgtctaattatgc +tcagtaccgggttgttcgggctacaatccgttaccgccctttagtgccaaatgccgttggtggttatgcaat +atctatttccttctggcctcagaccacaactacacccacctctgttgatatgaactccatcacttctactga +tgttaggattttagttcagcctggcatagcctctgagctggtcatcccgagtgagcgtcttcactatcgtaa +tcaaggttggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggattggttatgctttg +tatccatggttcccctgttaattcctatactaacacgccctatactggggcattggggctcctcgattttgc +acttgagcttgaatttagaaatctgacccctgggaacactaacactcgtgtgtcccgctacactagcacggc +ccgacaccgcttgcgtcgtggtgctgatgggacagccgagcttacaaccaccgcagccacacgttttatgaa +ggacttgcatttta---ccgggacaaat---ggcgttggtgaggtaggccgtggtatagccctaacgctatt +taatcttgctgatacacttctcggtgggctgccgacagaattgatttcgtcggctggaggtcaactgtttta +ttcccgcccggttgtctcggccaatggcgagccgactgttaagttatatacctctgtcgagaatgcacagca +ggacaagggcattgctataccacacgatatagacttaggggactcccgtgtggttatacaagactatgacaa +ccaacatgaacaggaccggcctaccccgtcgccggccccgtcccgccccttttcagtccttcgagccaatga +tgtcctgtggctctc-----------------------------tttgactgcggctgaatatgac------ +cagaccacttatggctcgtcgaccaaccccatgtatgtttcggatactgtcacattcgt---taatgtggcg +acaggtgctcaggctgttgcccgttctcttgattggtccaaggtcactctggatggccggccactcaccacc +at-----ccagcagtattccaagtcattttatgtgc-tcccgcttcgtggtaagctttccttctgggaagct +ggcacgactaag--gccggctacccttataattataatactactgctagtgatcagattttgattgagaatg +cagctggccac------cgtgttgccat-atctacttatactactagtcttgg--------------tgccg +gccctgtgtctgtttc-cgcggtcggtgttcttgctccgcactctgctttagctgtgcttgaagatactatt +gact---------atcctgcccgtg----cccacactttcgatgatttctgccctgagtgtcgcaacc---t +tggcttgcagggttgcgcttttcagtc--------cactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----tc-ccc--ccct--ttggt +gccc-c------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444105.1/17308/1-7308 |Hepeviridae isolate HEPAC32, complete genome +------gataga----gtcgctcgcaa--------------tg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggtccggccgtttttatcccgtgttcaaactgagatcct +tattaacttgatgcaaccccggcagcttgtgtttcggcctgaagtcctctggaaccacccgattcaacgagt +tatacacaatgagctggagcaata---ctgccgagccc-gcgctggccgttgtcttgaggtgggcgctcacc +caagatctattaatgacaaccccaatgtcctacaccggtgctttctccgcccggttgggagggacgtccagc +gctggtattccgcccccacccgtggtccagcggccaattgtcgccgctctgcgctacgcggcttgccccctg +tcgatcgtacatattgcttcgatgggttttcccgctgtgcctttgccgctgagaccgggatcgccttatact +cactgcatgacctttggccctcggacgttgcggaggctatggcccgccacgggatgacgcgcctgtatgccg +ctctccaccta-ccccctgaggttttgttacctcctggcacttatcatacaacatcttatcttttgattcac +gacggcaatcgcgccgtcgtgacttatgagggggacaccagtgcaggttataaccacgatgtgtctatactt +cgtgcatggatccgcaccactaaaatagttggtgatcacccactggtaatagagagggtccgcgccatcggc +tgccattttgttttgcttcttaccgcagcccccgagccatccccaatgccttatgttccgtaccctcgttca +acagaggtgtatgttagatccatatttggcccaggt---------gggtcgccttctcttttcccatcagcc +t----------gctctaccaagtcca-catttcatgctgtcccggttcatatctgggaccggctaatgcttt +ttggtgccaccttagatgatcaggccttttgctgctcccggctaatgacctatctccgcgggattagctata +aagtgaccgttggcgcgctcgtcgccaacgagggctggaatgcctcggaggatgcgcttaccgctgtgatta +ctgcagcgtacttgactatctgtcatcaacgctacctacggacacaggccatttctaaaggcatgcgtcggt +tggaggttgagcatgcccaaaagttcattacaaggctatatagctggctgtttgaaaagtc---------ag +gccgtgactatatccccggccgtcagctccagttttatgcgcagtgccgccgttggctctcggctggcttcc +atttggaccctagagttctcgtctttgatgaggcggtcccctgc---cgctgtcggagcttcctaaagaa-- +----agttgctggaaaattctgctgttttatgaaatggctagggcagga------gtgcacctgttttctgg +----------------aaccagcagagggcctggttggtgattgcggc--------catgataacgaggcct +acgaagggtccgaggtggaccccgccgagcctgctcaccttgatatttccgggacctatgcagtccacggtc +gtcagcttgaagctctatacagagcgcttaatatcccagatgacatcgcggctcgtgcgtcacgtctgacgg +ccactgtggaacttgctgccggcccaggccgaattgagtgccgcaccgtgcttgggaataagactttccgta +catcaatagttgatggtgcccgtctcgaggccaacggtcc------------------------tgagcagt +acgttttgacatttgatgattcacgccaggcaatgggggctgggcctcacagcctcacgtatgaacttgtcc +ctgctggtctgcaggtcaaaatatcttct-------aatggcttggattgcactgctgtattcccc---cct +ggtggggcgccaagcgctgcaccgggtgaagtggcggccttctgcagcgctttatacagatacaataggttc +acccagcgccattcgctgaccggaggactgtggctacaccctgaggggctccttggcctgtttccccctttc +tccccggggcatctttgggagtctgcaaaccctttttgcggtgagagtacactttacacacggacttggtct +acatctggtttttctagcgacttctctccacccgaggcggcttatgttgctccggtccctgacat----aag +gttgccctcgggtactccctcgtccgctagcgatat-----------------ctgggcgtt---------- +---------tccaccgcct----tctgaggggt--------------cggcgaccgttccgccacctgtaac +cccggttagtaagccaactga---------------------------------------cccgcc------ +------------------------------------------------------------------------ +-cagtcttgt-------------------------------------------------------------- +-------------tgctccc----aggcctcccgtccgtgagccacctacaccacagccggcccctactccg +t---------------------------------------------tcagcgagccagctaaccagcctagc +cctactgcacctagg-------------------------------------ccccccgcccgcgagtcgcc +tgcgcctct--------------------------------------aacgacccgttctcgccggc----- +-------------------ttctttacacatatcctgatggggccaaggtgtatgcaggctctttgtttgag +tcggattgtgactggctggttaatgcatctaatcctggccaccgccctggtggtggtctctgtcatgcgttc +taccagcgcttccctgagtcgt------tccatccgactgattttgtcatgcgcgatgg---ccttgccgca +tacactttgagcccgcgtccgatcattcatgctgtggcccccgactacagggttgagcagaaccccaagaga +ttagaggcagcataccgtgagacttgttctcgccttggcacagctgcctacccgctactggggtcagggatt +tatcaggtccctgtgggtttaagcttcgacgcctgggagcgtaaccaccgcccaggcgatgaactttacctt +actgagccagctgccacc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacactgc +cc------------gtacagctaatcttgcgcttgagatcg------------actctgccactgaggtggg +tcgtgcttgc---gccggctgcactattaaccccgggattgttcactaccagttcaccgctggggtccctgg +ctccgggaagtctagrtcyatacagcagggggatgttgatgttgtcgtcgtgccaactcgagagctccgtaa +cagttggcgacgtcgcggttttgctgcttttacaccccacacagcagcccgcgtcactaccggccggcgtgt +ggtgatagatgaagcaccttcgcttccaccgcacttgctcctgcttcatatgcagcgagcttcatctgtcca +ccttcttggcgatcccaatcagatccctgccattgactttgaacacgccggtttagtcccagcgattcgccc +tgagctagctcctactagttggtggcatgtcacccaccgctgccccgccgacgtgtgtgagctcatacgcgg +ggcttacccaaagattcagacgaccagccgtgtgttgagatctttattctggaatgag------cctgcggt +gggtcagaggctggttttcacgcaggcagctaaggctgctaaccctggtgcaattaccgttcatgaggccca +gggygccacattcactgagactaccataatagccacggctgatgctagaggtcttattcaatcttctcgtgc +acatgccatcgttgcgcttactcgccatacagaaaaatgcgtcattcttgatgctcctggcctactccgtga +ggtcggcatttctgatataattgttaataatttc------------------------------ttcctggc +tggtg--gcgaggtgggccaccatcgcccctctactataccccgcggtaacccagaccagaatttagatac- +-----cctacgagcatttcctccgtcctgccaaattagtgcctatcaccagcttgctgaggagctgggccat +cggccggccccagtggccgccgtcctgcccccttgccctgagctcgagcaagggttgctctacatgccgcag +gagcttacggtgtccgatagcgttttagtttttgagctcacggatatagttcactgccgtatggccgccccc +agtcaacgtaaggcggtcctctctacgctcgtcggcaggtacggccgccgaacgaagctgtatgaagcggcc +cactcagatgtccgcgagtctttaaggaggttcatccctaccattggcccggtccaggccacaacatgcgag +ctttatgagctggttgaggccatggtggagaagggtcaagacggctctgccgtgctcgagcttgacctctgt +agccgtgatgtctctcgcatcacgtttttccagaaagattgtaataaatttacaacaggtgagaccatagcc +cacggcaaggtgggccagggcatctcggcttggagtaaaaccttttgtgctctatttggcccgtggttccgc +gctattgagaaggagattctggctctactcccacccaatattttctatggtgatgcctatgaggagtcagtg +ttttctgcaaccatttctggggctggctccagcatg---gtttttgagaacgatttttctgagtttgatagc +acccagaacaattactctct------------------aggccttgagtgtgtcattatggaggagtgtggc +atgccccagtggcttatccgtctgtatcacttggttagatcagcctggaccctgcaagccccgaaagaatcc +ttgaaaggtttttggaagaagcattccggtgagcctggcaccctcctttggaataccgtctggaacatggcg +atcatagcacactgctatgaattccgtgatctgagagtggcggcgtttaagggggatgattcagtggtcctc +tgtaatgattaccgccagagccgtaatgcagccaccctgatagccggatgtgggttgaaattgaaggttgat +taccggcctataggcctgtatgctggggttgtggtggctccgggcctcggggcacttccagatgttgtccgg +tttgctggtcgattatctgagaagaactggggcccgggccctgagcgcgccgaacagttgcgcctagcagtt +tgtgacttcctccgaaggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +cggggttagccccgggctggtgcataaccttattggcatgctacagactattgctgatggaaaggcccactt +tactgagactgtcaagcctgtgctggaccttacaaactctatcatacagaggttggaatgaataacatgtc- +t----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gctgctgctcgtcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcaacggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtttcacaatccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtttcaccagcgcctgacacggccccagttcctgatgttgactctcgtggcgccatcttgcgccgtca +gtataatctgtccacttcccctttaacttcatctgttgcctctggaactaatcttgttttgtatgctgcccc +gcttaatcctctcctgcctctccaagacggcaccaatacccacatcatggcgactgaggcgtctaattacgc +tcagtaccgggttgttcgggccacaatacgctatcgccctctggtgccgaatgccgtcggcggctatgcgat +ttctatctccttttggccccagactacaactacacctacctctgttgatatgaactctattacttctacaga +tgttaggattttagtccagcctggaatagcctctgagttggtcatcccgagtgaacgccttcactatcgtaa +tcagggttggcgctctgttgagacatcgggtgtagccgaggaggaggcaacatcaggtttggttatgctttg +tattcatggttcccccgttaattcttatactaacacgccctatactggggcgttggggctccttgattttgc +acttgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgttatactagtacagc +ccggcaccgtttgcgccgcggtgccgatgggacggctgagcttacaaccactgcagccacacgttttatgaa +ggacctgcatttca---ccgggacaaat---ggtgttggagaggtgggccgtggtatagccttaacgctatt +taatctcgctgacacacttctcggcgggctgccgacagaattgatttcgtcggctggaggtcaactgtttta +ctcccgcccggtcgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaaaggcattgctataccacatgacatagacttaggagagtcccgtgtggttatacaagactatgataa +ccaacatgaacaagaccggcctactccatcaccggccccttcccgccccttttcagtccttcgagccaatga +tgtcttatggctctc-----------------------------tctgactgctgctgaatatgac------ +cagactacttacggttcgtcgaccaaccctatgtatgtctcagatactgtcacatttgt---taatgtggcc +acgggtgcccaggctgttgctcgatcccttgactggtccaaggtcaccttagatggccggccactcactact +at-----tcagcagtactccaagacattttatgtrc-tgccgcttcgtggcaagctctccttctgggaagct +ggtacgactaag--gctggctacccctacaattataacactactgctagtgaccagattctgatcgagaatg +cagccggtcac------cgtgttgccat-atctacttacactactagtcttgg--------------tgccg +gccctgtgtctgtttc-tgcggtcggtgtccttgctccgcactctgctttagctgtgcttgaagatactatc +gact---------accctgcccgtg----ctcatacttttgatgatttttgccctgagtgccgtaatc---t +cggtttgcagggctgcgctttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattaa-tt----cc-tt---ctt------gt +gccc-cct--------tc-taat-tttc--------tc-tgtt---------------attt-c-------t +tcttctct----gcg---------------ttcc-------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444107.1/17263/1-7263 |Hepeviridae isolate HEPAC85, complete genome +-----------------------------------a-tatacg-------------c-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatctcgtattcagactgacatcct +tattaacctgatgcaaccccggcagcttgtgttccggcctgaggtcctctggaatcatccgatccagcgggt +catacataatgagctggagcaata---ctgccgagccc-gcgctggccgctgtcttgaagtgggcgctcatc +caagatctatcaatgataaccccaatgttctgcaccggtgctttctccgcccggttggaagagatgtccagc +gctggtattcagctcctacccgtggtccagcggctaactgccgccgttctgcgctacgcggtctgccccctg +tcgatcgcacatactgcttcgacgggttttcccgctgcgcctttgccgctgagacagggattgctttatact +cactgcatgacctttggccctcggacgttgcggaggccatggctcgccacgggatgacgcgcttgtatgctg +ccctccattta-cctcctgaggttctgttaccacctggcacctaccatacaacctcctatcttctgatccac +gacggcaatcgtgccgtcgtgacttatgagggtgatactagtgcgggttataatcacgatgtgtctatactt +cgtgcatggatccgcaccaccaaaatagttggtgaccacccactggtaatagagagggttcgtgccatcggc +tgccattttgttctactccttactgcagcccccgagccatccccaatgccttatgtcccgtaccctcgctca +acagaggtgtatgttaggtctatattcggccctggt---------gggtcgccttctctttttccgtcggcc +t----------gctctaccaagtcta-cattccacgccgtcccggtccatatttgggatcggcttatgcttt +ttggtgctaccttagatgatcaggccttctgctgctcgcggcttatgacctatctccgcgggattagctata +aagtcactgttggcgcacttgtcgccaacgaaggctggaatgcctcggaggatgcgctcaccgctgtgatta +ctgcagcgtatttgactatctgccatcagcgctacttacgtacgcaggccatttctaaaggcatgcgtcggc +tagaggttgagcacgcccaaaaatttattacaaggttatatagttggctgttcgaaaagtc---------ag +gccgtgactatattcccggtcgccagctccagttttatgcacagtgccgccgctggctctcagccggctttc +atctggaccctagagttctcgtttttgacgaggcggtcccttgc---cgctgccggaacttcttaaagaa-- +----agttgccggaaaattttgttgttttatgaaatggttagggcagga------gtgcacctgctttttgg +----------------agccagcggaaggcctggttggcgactgtggc--------catgataacgaggctt +atgaggggtctgaggtggaccccgctgagcctgctcaccttgatgtttccgggacttatgcggttcacggcc +gtcagcttgaggctctatatagggcgcttaacatcccagaagacattgcagcccgtgcgtcacgtttgacgg +ctactgtagaacttgccgccagcccaggtcgactcgagtgccgtacggtgcttgggaacaagacttttcgta +catcaataactgatggcgcccatctcgaggccaacggtcc------------------------cgagcagt +atgttttgacatttgatgactctcgtcaggccatgggggctgggcctcacagcctcacgtatgaacttgtcc +ctgccggcctgcaagtcaaaatatcttct-------aatggcttggattgtaccgctacatttccc---ccc +ggtggggcaccaagcgccgcaccaagtgaagtggcggctttctgtagcgccctgtacaggtacaataggttc +acccagcgccattcactgaccggtgggttgtggctgcaccccgaggggcttcttggcttatttccccctttc +tctccggggcatcattgggagtctgcaaaccccttttgcggcgagagcacactttatacacgaacttggtct +acatctggtttttctagcgacttctccccacccgaggcggcccatgctgtcccagcacctgacac----ggg +actgccctcgggtgctccctcgtccgctagtgatat-----------------ttgggtgtt---------- +---------cccaccgccc----tctgagaggt--------------cgacgatcgccccaccacccgtgac +cccggttagtaagccagctaa---------------------------------------cccgcc------ +------------------------------------------------------------------------ +-aagtcctac-------------------------------------------------------------- +-------------tacatct----agaccccttgtccttgagccgccaacaccaccaccagccctaaccccg +g---------------------------------------------t------------------------- +--tactacacatagg-------------------------------------cctcccgtccgtaagccgcc +tacaccact--------------------------------------atcggcccgtacccgccggc----- +-------------------tcctttatacataccctgatggggccaaggtgtatgcgggttctttgtttgag +tcagattgtgattggctggttaatgcgtctaaccctggccaccgtcctggtggtggtctttgccatgcattc +tatcaacgcttcccggagtctt------tccatccgactgattttgttatgcgtgaggg---tctcgccgca +tatactttgagcccgcgtccgatcattcatgctgtggcccctgactatagggttgagcagaaccccaagagg +ttagaggcggcataccgtgagacttgctcccgtctcggtacagctgcctatcctctactggggtcagggatt +taccaggtccccgtaggtttaagtttcgacgcctgggagcgtaaccatcgcccaggcgatgaattgtatctt +actgagcctgctgccacc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------accagccctaacaattactgaggatacagc +cc------------gcacagctaaccttgcgcttgagattg------------actctgctactgaggtggg +ccgtgcttgc---gccggctgtactattacccccgggattgtccactatcaattcaccgccggggttcctgg +ctctgggaagtctagatctatacagcagggggatgtygatgtcgtagtcgtgccgactcgtgagctccgtaa +cagttggcgacgccgtggctttgctgcttttacaccccacacagcagcccgtgttactgccggccgacgtgt +tgtgatagatgaggcaccttcgcttccaccgcacttgttgctgctccatatgcagcgagcctcatcggtcca +tcttcttggtgaccccaaccagatccctgccattgattttgagcacgccggtttggtcccagcaattcgccc +tgagctagctcctactagttggtggcatgtcacccaccgctgccccgccgatgtgtgtgagctcatacgcgg +ggcctatcccaagattcagacgaccagccgtgtgctgagatctttattctggaatgag------cctgcggt +gggtcagaggctggtttttacgcaggcggccaaagcggccaaccccggcgcaatcaccgtccatgaggccca +gggtgctacgttcactgagactactattatagccacggccgatgctagaggtcttattcaatcttcccgcgc +acatgccattgttgcgcttacccgccacactgaaaaatgcgtcattcttgacgctcctggcctgctgcgcga +ggtcggcatttctgatataattgttaataacttt------------------------------ttcctggc +tggtg--gtgaagtgggccaccatcgcccctctaccataccgcgcggcaatccagaccaaaacttagacac- +-----cctgcgagcattccctccgtcctgccagattagtgcctaccaccaattggctgaggagctaggtcac +cggccggccccagtggccgccgtcctgcccccttgccctgagcttgagcaggggctactctacatgccgcag +gagctaacggtgtccgatagtgtcctgatttttgaactcactgacatagttcactgccgtatggctgccccc +agtcaacgtaaggcggtcctttctacactcgtcggcaggtacggccgccgaacgaagctgtatgaagcggcc +cattctgatgttcgtgagtctttaggaaggttcattcctactatcgggccggtccaggccaccacatgtgag +ttatatgagctggttgaggccatggtggagaagggccaggatggctccgccgtgcttgagctcgacctctgc +agccgagatgtctcgcgtattacattcttccagaaggactgtaataaatttacaacaggtgagaccattgcc +cacggcaaggtgggccagggtatttcggcttggagtaagaccttctgtgctttatttggcccgtggttccgt +gccattgagaaagagatccttgccctgcttccacccaacattttctatggcgatgcctatgaggagtcagtg +ttttctgcagccatttctggggccggctccagtatg---gtttttgagaacgatttttctgagtttgatagc +acccaaaacaatttttctct------------------aggccttgagtgtgtcattatggaggagtgtggc +atgccccagtggcttattcgactgtaccatttagttagatcagcctggactctgcaagccccgaaagagtct +ctgaaaggtttctggaagaagcattcyggcgagcctggcactcttctttggaacaccgtttggaacatggcg +atcatagcacactgctatgaatttcgtgatttgagggtggcagcgtttaagggggatgattcagtggttctt +tgcagtgattaccgccagagccgcaatgcggccaccctgatagccggttgtgggttgaaattgaaggttgat +taccggcctataggtttgtatgccggcgttgtagtggccccgggcctcggggcacttcctgatgttgtccgg +tttgccggccgattatccgagaagaactggggcccgggtcccgagcgcgccgaacagctacgcctagcagtt +tgtgatttccttcgagggctgacgaatgttgcgcaggtttgtgttgatgtcgtgtcccgtg-------ttta +tggggttagccccgggctagtacataaccttattggcatgctacagactattgctgatggaaaggcccactt +taccgagactgtcaaacctgtgctggatcttacaaattctattatacagaggttggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgccatgcgccctggggctgttct +gctgctgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcttatcacaacccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgcgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtttcaccagcgcctgatacggccccagtccctgatgtagactctcgtggtgctattttgcgccgtca +gtataatttgtccacctcccctttaacctcatctgttgcttctggaactaatcttgtcttgtatgccgcccc +gcttaaccctcttctgcctctccaagacggcaccaatactcacatcatggcgactgaggcgtctaattacgc +tcagtaccgggttgtccgggctacaatccgttatcgccctttggtgccgaatgccgtcggcggttatgcaat +atctatttccttttggcctcagactacaactacacccacctctgttgacatgaattcaatcacttctactga +tgttaggattttagttcagccaggcatagcctctgagctggtcatcccgagtgagcgccttcactatcgtaa +ccagggttggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggtctggtcatgctttg +tattcatggttctcctgttaattcttatactaatacgccctatactggggcattagggcttcttgactttgc +acttgagcttgaatttagaaatttaacccctgggaacactaacacccgtgtgtccagatacactagtacagc +ccggcaccgtctgcgccgtggtgccgatgggacagccgagcttacaactactgcagccacacgttttatgaa +ggacttgcatttta---ctgggacaaat---ggtgttggtgaggtgggtcgtggtatagctctaacgctatt +taatcttgctgatacacttctcggcgggttgccgacagaattgatttcgtcggctggaggccaactgttcta +ctcccgcccggttgtctcggccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggcattgctataccacatgatatagacttaggggattcccgcgtggttatacaagactatgataa +ccaacatgagcaggaccggcctaccccgtcgccggccccgtcccgccccttttcagtccttcgagccaatga +tgtcctgtggctctc-----------------------------cctaactgcggctgaatatgac------ +cagaccatctacggctcgtctaccaaccctatgtatgtttcagatactgtcacacttgt---taatgtggcg +acaggtgcccaggctgttgcccgatcccttgactggtctaaggtcaccttggacggtcggccacttactacc +at-----ccagcagtactctaagacattttatgtac-tgccgctccgtggcaagctttccttttgggaagct +ggtacgactaag--gctggctacccttacaattataatactactgctagtgaccagattttgattgagaatg +cagccggtcac------cgcgttgctat-atctacttacactactagtcttgg--------------tgccg +gccctgtgtctgtctc-tgcagtaggcgttctagctccgcactctgctttagctgtgcttgaagataccatt +gatt---------atcccgcccgtg----cccatactttcgacgatttctgccctgagtgccgcaatc---t +cggcttgcagggctgtgctttccagtc--------tactgttgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt-----c-ccct--tt------gt +gccc-cct--------tc-taaa-tt-tt----gt-tc-tgt----------------tatt-t-------t +ctttttct---------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444108.1/17283/1-7283 |Hepeviridae isolate HEPAC37, complete genome +--------------------------------------------------------t-----ggtcgatgc- +---catggaggcccaccagttyattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggtccggccgtttttatcccgtgttcagactgatattct +tattaacctgatgcaaccccggcagcttgtgtttcggcctgaagttctctggaatcaycctatccagcgggt +catacataatgagcttgagcagta---ctgccgagccc-gcgctggccgctgtttagaggtaggcgctcatc +caagatccatcaatgacaatcccaatgtcctgcaccggtgctttcttcgcccggtcgggagagacgtccagc +gctggtattctgcccccacycgtggcccagcggctaactgccgccgttcagcgctacgtggtttgccccctg +tcgatcgcacatattgcttcgatgggttctcccgctgcgcctttgccgctgagaccgggattgctttgtayt +cactgcatgatctttggccttcggacgttgcggaggccatggctcgccacgggatgacgcgcctgtacgctg +ccctccaccta-cctcctgaggtcctgctaccacctggcacttaccacacaacctcctatcttctgattcac +gatggtaaccgtgccgtcgtgacttatgaaggtgacactagtgcgggctataaccacgatgtgtccatactt +cgtgcatggatccgcaccaccaaaatagttggtgatcacccactggtaatagagagggtccgcgccattggc +tgccattttgtcctactcctcactgcagcccctgagccttccccaatgccttatgttccgtaccctcgctca +actgaggtgtatgttagatctatatttggtcccggt---------gggtcgccctctctcttcccgtcagcc +t----------gctctaccaagtcta-cattccacgccgtcccggtccatatttgggaccggcttatgcttt +ttggtgccaccttagatgaccaggccttttgctgctcgcggctcatgacttacctccgcgggattagctata +aggtgactgttggcgcactcgtcgccaacgagggctggaatgcctcggaggatgcgcttaccgctgtgatca +ctgcagcgtatctgactatctgccatcagcgctacctacgaacacaggccatytccaaaggtatgcgtcggc +tagaggttgagcatgcccaaaagtttatcacaaggctatatagttggctgtttgaaaagtc---------ag +gccgtgactacatccccggtcgccagctccagttttatgcrcagtgccgtcgttggctctcggccggctttc +acctggaccccagagttctcgtctttgacgaggcggtcccttgc---cgttgccggagctttctaaagaa-- +----ggttgctgggaagttttgttgttttatgaaatggttggggcagga------gtgcacctgttttttgg +----------------agccagcggaaggcctggttggtgactgtggc--------catgataacgaggcct +atgaggggtctgaggtggaccccgccgagcctgcttaccttgacgtttccgggacctatgcggtccacggcc +gtcagcttgaggctctatatagagcgcttaatatcccagatgacattgcggctcgtgcatcgcgtctgacgg +ctactgtagaacttgccgccagcccaggtcgacttgagtgtcgtacggtgcttgggaataagacttttcgka +catcaataactgacggtgcccacctcgaagccaatggtcc------------------------cgagcagt +acgttctgacatttgatgactctcgccaggctatgggggctgggccccacagccttacgtatgaactcgtcc +ctgccggtttgcaggtcaagatatcttct-------aatggcttggattgtaccgccatattcccc---cct +ggtggggcacccagtgctgcaccaggtgaagtggcggccttctgtagcgccttatacaggtacaataggttc +acccagcgccattcgctgaccggcgggctgtggctgcaccctgaggggcttctcggtctgttcccccctttc +tctccggggcatctttgggagtctgcaaaccccttttgcggtgagagcacactttacacgcggacttggtct +acatctggtttctctagcgacttctctccacccgaggcggcctacgccgccccagcacccgacat----ggg +gccrccttcgggtgccccctcgtctgctagcgatat-----------------ctgggtgct---------- +---------cccaccgccc----tctgagaggt--------------cggcgatcccatcgccacccatagc +cccggttagtaagccggctaa---------------------------------------accacc------ +------------------------------------------------------------------------ +-aagtcttac-------------------------------------------------------------- +-------------tacatcc----gggccccctgcccgcgagccgcctacaccatcaccggctctaactccg +g---------------------------------------------ccagtgatccagctaacctgtctagc +cttactacatctaag-------------------------------------tcctccgtccgtaagccgtc +tacaccacc--------------------------------------accggcccgcactcgccggc----- +-------------------tcctttacacataccctgatggggccaaggtgtatgcaggttctctgttcgag +tcagattgtgattggctggttaatgcatctaaccctggccaccgccctggcggtggtctctgtcatgcattt +taccagcgcttcccggaatcgt------tccatccgactgattttgttatgcgtgaggg---ccttgccgca +tacactctgagtccccgcccgatcattcatgctgtggcccccgactacagggttgagcagaaccccaagaga +cttgaggcggcatatcgtgagacctgctcccgtctcggcacagctgcttatcctttattggggtcggggatt +taccaggtccccgtgagtttaagtttcgacgcttgggagcgcaaccatcgcccaggcgatgaactatatctt +actgagcctgctgccgcc-------------------------------------------------tggtt +cgaggctaataagccgtccca--------------------------------------------------- +------------------------------------------gccagctctaacaattactgaggacaccgc +tc------------gcacagctaaccttgcgcttgagattg------------actctgctactgaggtggg +ccgagcttgc---gccggctgtactattaaccccgggattgtccactaccagttcaccgccggggttcctgg +ctctgggaagtctagmtcyatacagcagggrgatgtygatgtcgtggttgtgccaactcgtgagcttcgtaa +cagttggcggcgccgcggctttgctgcttttacaccccacacagcagctcgcgtcactgccggccggcgtgt +tgtgatagacgaggcaccttcgctcccaccgcacctgctgttgctccatatgcagcgggcctcatcggttca +tctccttggtgacccaaaccagatccctgccattgactttgagcacgccggyttggtcccagcgattcgccc +cgaactagcccctactagttggtggcatgttacccaccgttgccccgccgatgtgtgtgaactcatacgtgg +ggcctaccccaagattcagacgaccagccgtgtgttgagatctttattctggaacgag------cctgcggt +gggtcagaggctggttttcacgcaggccgctaaagcggccaaccctggcgcaatcactgtccatgaggccca +gggtgccacgttcactgagactactattatagccacggccgacgctagaggtcttattcaatcttcccgcgc +acatgccatcgttgcgcttactcgccacacagagaaatgcgtcatcctcgacgctcctggtctgctgcgtga +ggtcggtatttctgatataattgtcaataacttt------------------------------ttcttggc +tggtg--gtgaagtgggtcaccaccgcccctctaccataccgcgtggcaatccagaccaaaacttagacac- +-----cctacgggcgtttcctccgtcctgccaaatcagtgcctatcaccaactggctgaggagctgggccac +cgaccggccccggtggccgctgtcctgcccccttgccctgagcttgagcaggggctactctacatgccgcag +gagcttacggtgtccgatagcgtcctaatttttgaactcacggacatagttcactgtcgtatggccgccccc +agtcaacgtaaggcggttctttctacgctcgtcggcaggtacggccgtcgaacgaagctgtatgaagcggcc +cattctgatgttcgtgagtctctggggaggtttatccctactatcggaccggtccaagccaccacatgtgag +ttatatgagctggttgaggctatggtggagaagggccaggacggctccgccgtgcttgagctcgacctctgc +agccgagatgtctcgcgtattacattcttccagaaggactgtaataaatttacaacaggtgagactattgcc +catggcaaggtgggccagggcatttcggcctggagtaagaccttctgtgctctttttggcccgtggttccgt +gccattgagaaggagattctggctttacttccacccaacattttctacggcgatgcctacgaggagtcagtg +ttttctgcagccatttctggggccagctccagtatg---gtttttgagaacgatttttctgagtttgatagt +acccaaaataatttttctct------------------cggccttgagtgtgtcatcatggaggagtgtggc +atgccccagtggcttatccgactgtatcatttagttagatcagcttggactctgcaggccccgaaagagtct +ttgaaaggtttctggaagaagcattctggcgagccyggcaccctcctttggaacactgtttggaacatggca +atcatagcacactgctatgaattccgtgacttgagggtggcagcgtttaagggggatgattcagtggttctt +tgcagtgattaccgccagagccgcaatgcggctaccttgatagccggctgtgggttgaaattgaaggttgat +taccggcctataggtttgtatgccggtgttgtagtggccccgggccttggggcacttcctgatgttgtccgg +ttcgccggtcgattatctgagaagaactggggcccgggccccgagcgcgccgaacagctgcgcctagcagtt +tgtgatttccttcgagggctgacgaatgtggcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggttggtgcataaccttattggcatgctacagactattgctgatggaaaggcccattt +tactgagactgttaaacctgtgctagaccttacaaattctattatacagaggytggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgtcatgcgccctagggctgttyt +gctgctgttcttcgtgtttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagtcgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcctatcacaacccggggctggagctcgccctc +gacagccgacccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgttaac +tgcagtctcaccagcgcctgacacggctccagtccctgatgtagactctcgtggtgctatcttgcgccgcca +gtataatttgtccacctctcctttaacttcatctgttgcttctggaactaatcttgttttgtatgctgcccc +gctcaaccctcttttgccccttcaagacggcacgaatactcacatcatggcgactgaggcgtctaattacgc +ccagtatcgggttgtccgggctacgatccgctatcgccctttggtgccgaatgcagtcggcggttatgcaat +ttctatttccttttggcctcagactacaactacacccacctctgttgatatgaattctatcacttctactga +tgttaggattttagtccagcctggcatagcctctgagctggtcatcccgagtgagcgccttcactatcgtaa +tcaaggctggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggcctggttatgctttg +tatccatggttcccctgttaattcctataccaatacgccctatactggggcattagggcttcttgactttgc +ccttgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgatacaccagtacagc +tcggcaccgtttacgtcgtggtgccgatgggacagccgagctcacaactactgcagccacacgttttatgaa +ggacctgcatttca---ccgggacaaat---ggtgttggcgaggtgggccgcggtatagctttaacgctatt +taatcttgctgatacacttctcggcgggttgccgacagaattaatttcgtcggctggaggtcaactgtttta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggcattgctataccacatgatatagacttaggggattcccgtgtggtcatacaagactatgacaa +ccaacatgagcaggaccggcctaccccgtcgccggccccgtcccgccccttttcagtcctccgagctaacga +tgtcctatggctctc-----------------------------tctaactgcggctgaatatgac------ +cagaccacctatggctcgtctactaatcctatgtatgtttcagatactgtcacatttgt---taatgtggcg +acgggtgcccaggccgttgcccgatcccttgattggtccaaggtcacattagatggtcggccactcaccacc +at-----ccagcagtactccaagacattttatgtac-tgccgctccgtggcaagctttccttttgggaagct +ggtacgactaag--gctggctacccttacaattataacactactgctagtgaccagattctgatcgagaacg +cagccggtcat------cgcgtcgctat-atctacttacactactagtctcgg--------------cgccg +gccctgtgtctgtttc-tgcggtcggcgttcttgcccctcactctgctttagctgtgcttgaagatactatt +gatt---------atcccgctcgtg----ctcatacttttgatgatttttgccctgagtgccgcaatc---t +tggcctgcagggctgtgctttccagtc--------tactgttgctgagcttcagcgtct------------- +--------tagaatgaaggtaggtaagacccgggagtcttaa-tta-at----tc-ctct-ttt------gt +gccc-cct--------tc-taaa-cc-tt----gc-tt-agt----------------tatt-t-------c +ttatttc----------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444110.1/17242/1-7242 |Hepeviridae isolate HEPAC111, complete genome +-------------------------------gagcg-cagatgct---------gtc-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcatcactactgccattgag---caagctgctctggc +tgcggccaattctgccttggcgaatgctgtggtggttcggccgtttttatctcgtttacagactgagattct +tattaatttgatgcaaccccgacagttggtctttcgacctgaggtgctctggaatcatcccatccaacgtgt +tatacataatgaattggagcagta---ctgccgggccc-gggctggtcgctgcttggaaattggagcccatc +caaggtcaatcaatgataatcctaatgttctgcaccggtgttttttacgaccggtcgggagggacgtccagc +gctggtattccgcccccacccgcggccccgcggccaactgccgccggtctgcgctgcgtggactcccccctg +ttgaccgcacctactgctttgatggattttctcgttgtgctttcgctgcagagactggtgtggccctctact +ctctgcatgatctctggccggctgatgttgcggaggctatggcccggcatgggatgacacgtttgtatgccg +cactacacctc-cccccagaggtactgctaccaccaggcacttaccacacaacctcgtatctcttgatccac +gacggcgaccgcgccgttgtaacttatgagggtgatactagtgcaggctataaccatgatgtctctatactc +cgtgcgtggatccgcacgaccaaaatagttggtgaccacccgttggttatagaacgagtgcgggccatcggc +tgtcactttgtgttgttgctcaccgcagcccctgagccgtcacctatgccatatgtcccgtaccctcggtca +acagaggtgtacgtccgttctatattcggccctggt---------ggttccccgtctctgttcccatcagct +t----------gctccaccaaatcca-catttcatgccgtcccggttcatatctgggaccggctcatgctct +ttggcgccaccctggatgaccaggcgttttgttgttcacggcttatgacatacctccgtgggattagctata +aggttactgttggtgcccttgttgctaatgaggggtggaatgcctctgaagatgcccttaccgctgttatca +ctgcagcgtacttgaccatctgccaccagcgttacctccgcacacaagctatatctaagggcatgcgccggc +tggaggttgaacatgctcagaaattcattacaagactttacagctggctatttgagaaatc---------cg +gccgtgattacatccccggtcgccaacttcaattttatgcacagtgccgtcgttggctatctgcgggtttcc +atcttgacccgcgggtgctcgttttcgatgagtcagtgccttgt---cgctgtaggacgttccttaagaa-- +----agtcgctggcagattctgttgctttatgaagtggttggggcagga------atgcacctgtttcttgg +----------------agccggctgagggtctggttggtgatcatggt--------catgacaatgaagcct +atgagggctcagaggtygatcaggctgagcctgcactccttgatgtttctgggacatatgctgttcacgggc +gccagcttgaggccctgtacagggcacttaatatccctcatgatatcgccgcccgagcatctcgtttaacgg +ccaccgttgagcttgtcgcaggcccagaccgtttggagtgccgtactgtgttagggaacaagactttcagga +caacggtggtcgacggcgctcatctcgaagcaaatggccc------------------------cgagcagt +atgttctttcatttgacgcctcccgccagtctatgggggccgggtcgcatagtctcacctacgagctaaccc +ccgctggcttgcaggtgaagatctcgtcc-------aacggtctagactgtaccgcgacgttcccc---ccg +ggcggtgctcccagcgccgcaccaggtgaggtagccgccttttgcagcgccctttataggtataataggttt +acccagaggcactcgctgacaggcggcttgtggctgcatcccgaggggctgttgggcattttcccccctttc +tcgcccgggcatctttgggagtctgctaaccctttctgtggagagagtactttatacacccggacttggtct +acatcaggtttctctagtgacttctccccccccgaggcggctgctcctgcgccggttgctgcctt----gga +gccacccc---accccacaccccccgctagtgacat-----------------ctgggtgct---------- +---------gccgccgcct----tctgaagaac--------------accagattgatgcggtgcctgtccc +cccca------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcttgctcagctgcccagc +tctgttgagcctaga-------------------------------------ggccccgtgcgtaagccgcc +gccgccgcc--------------------------------------accgtctcgcactcgtcgcc----- +-------------------tcctttatacttacccagacggcgccaaggtgtatgcggggtcactgtttgag +tctagttgtgactggctggttaacgcatcaaaccctggccaccgccctgggggtgggctgtgccatgccttc +tatcaacgctaccccgagtcgt------tccatccgactgagtttatcatgcgtgacgg---tctcgccgcg +tacaccttgacccctcgccctatcatccatgcggtggctcctgactatagggtcgagcagaacccaaagagg +cttgaggcggcataccgggagacctgttcccgccgcggtaccgctgcctacccactcctaggctcgggtatt +tatcaggtccctgtcagcctaagttttgacgcctgggagcgtaatcaccgccctggggacgagctttacttg +actgaccccgccgctacc-------------------------------------------------tggtt +tgaggctaataagccgacaca--------------------------------------------------- +------------------------------------------gccggcccttactataactgaggatacagc +tc------------gcacggccaacttggcactggagatcg------------atgccgccacggaagttgg +ccgtgcttgt---gctggttgcacagttagccccggggttgtacactaccaatttaccgctggcgtccctgg +ctcggggaagtctaggtccatacagcagggggatgttgatgtggttgttgttcccacccgagaacttcgcaa +taactggcgccgccggggctttgcggcctttacaccccatacggcggcccgtgtgactctgggccgccgtgt +tgttattgatgaggccccgtccctcccaccacatttgctgttgcttcatatgcagcgggcctcgtcggtcca +tcttcttggcgacccaaaccagatccctgctatagactttgagcatgccggcctggtccccgcaatacgtcc +tgagcttgcacccaccagctggtggcatgtcacacaccgttgccccgctgatgtgtgtgagctcatccgcgg +ggcctatcccaagatccagaccacaagccgtgtgctgcggtctctattttggaatgaa------cccgccac +cgggcagaagttagtcttcacgcaggccgctaaggctgctaaccctggtgcgattacagtccatgaggccca +gggagccacatttacagagaccacaattatagctacggctgacgccaggggccttattcagtcgtctagggc +ccatgcyatagtcgcactcacccgccacacagagaagtgcgttatattggatgcccccggcctgttgcgcga +agttggcatatcagacataattgttaataatttc------------------------------ttccttgc +cggtg--gggaggtgggtcatcatcgcccctctgtgatacctcgtggcagccctggtcagaaccttgagac- +-----attgcaggccttcccgccttcttgccagattagtgcttaccatcaactagctgaggaattgggccac +cgaccggctcctgtcgctgcagttttgcccccttgccctgagcttgagcagggtctgttgtacatgccgcag +gagcttacagtgtccgatagcgtgctggtcttcgaactcacggatatagtccattgccgtatggccgcccct +agtcagcggaaggctgttctatcgacactcgtggggaggtatggccgtagaactaagctgtatgaggccgcg +cattccgacgtccgtgagtccttagccaggttcatccccactatcgggcctgttcaggccaccacatgcgag +ctgtatgagttggtcgaggccatggtagagaagggccaagacggttccgccgtgttggagctcgacctgtgc +aaccgcgacgtctcgcgtattaccttcttccaaaaagactgtaataagttcaccaccggtgagaccatagct +cacggtaaggtcggacagggtatttcagcttggagtaagaccttttgcgccctgtttggcccttggttccgt +gccattgagaaagaaatactagccctactcccacctaatattttctatggcgacgcatacgaggagtctgtg +ttcgctgcagctgtgtctggggcggggacatgcatg---gtatttgagaatgatttctcggagtttgacagt +actcagaataacttctccct------------------cggccttgagtgtgtagtcatggaggaatgtggt +atgcctcagtggttaatccggctgtatcatctggttaggtccgcctggatcctacaggcgccgaaggagtcc +cttaaaggcttttggaagaagcactctggtgagcccggtaccctgctttggaacaccatctggaatatggcg +atcatagcacactgctatgaatttcgcgatttcagagtcgctgcctttaagggcgatgactctgtggttctt +tgcagcgactatcgccagagccgcaacgctgcggccctgattgcaggctgcgggcttaaattaaaggttgat +taccgtcctatcgggttgtatgctggtgtggtggtggcccccggcttggggacactgcccgatgtagtgcgc +tttgctggccggctgtctgagaagaactggggccctggcccagagcgtgccgagcagctgcgtcttgccgtt +tgtgattttcttcgagggttaacgaatgttgcgcaggtctgtgttgatgttgtatcccgtg-------ttta +cggagttagccctgggctggtacataaccttattggtatgttgcagaccattgctgatggtaaggcccactt +cacagagactgtcaaacccgtgctcgaccttacaaactccataatacatcggatagaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgcgccctagggttgttct +gttgttgttcctcgtgtttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgactggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgccgatgtcgtttcacaacccggggctggagctcgccctc +gacagccgccccg---------------ccccctcggttccacttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctgcccca---------gccggggctgcgccgctgac +tgctgtgtcaccggcccccgacacagcacctgtgcctgacgtcgattctcgcggcgctatattgcgacgaca +gtataatctatccacatccccgctcacgtcatccgttgcttcgggtactaatctggttctttatgctgcccc +gttaaaccccctcctaccccttcaggacggtactaatacacatatcatggctaccgaggcgtctaactatgc +ccagtaccgggttgttcgggccacgatccgttatcgcccgttggtacctaacgccgtcggcggctatgcaat +ttccatttcgttttggcctcaaaccactactactcctacatctgtggatatgaattctattacctctaccga +tgttaggattctggttcagcctggtattgcttccgaacttgtcattcctagcgagcgtctccattaccgtaa +tcagggttggcgctctgttgaaacatcgggcgtggccgaggaggaagctacctctggcttggttatgctttg +cattcatggttcccctgttaattcctacactaacaccccttacactggggcgcttgggctccttgactttgc +attagaacttgagtttaggaatttgacacccgggaacactaacacccgtgtatcccggtacacaagtacagc +tcgccaccggctgcgccgcggtgccgacggcaccgctgagcttactactacagcagccacgcgctttatgaa +ggacctgcatttta---ccggtacgaac---ggggttggtgaggtgggccgtgggattgctttgacactgtt +caatcttgctgatacacttctcggtggtttgccgacagaattaatttcgtcggccgggggtcagttatttta +ctcccgccctgtcgtctcagccaatggcgagccggctgtcaagttgtatacatctgttgagaatgcacagca +ggataaggggatagctattccacatgatatagatttgggcgactctcgtgtggtgattcaggattatgataa +ccagcacgagcaggaccggcctaccccctcgcccgccccgtctcgtcctttctcggtcctccgcgctaatga +tgttttgtggctctc-----------------------------tcttaccgctgctgagtatgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctcagacactgtcacatttgt---caatgtggcc +acaggggctcaggctgtcgcccgttctcttgattggtccaaagtcaccctggacggccgccctcttactacc +at-----tcagcagtactctaagacattttatgtcc-tcccacttcgcgggaagttatctttttgggaggcc +ggcacaactaaa--gccggttacccttataattataacacaactgctagtgaccagattctgattgagaacg +cggctggccat------cgtgtcgctat-atctacttatactaccagcttggg--------------cgctg +gccctgtgtcggtctc-tgcggtcggtgtattggccccacactcggcccttgctattcttgaagacactgtt +gatt---------atccggcccgtg----ctcatacttttgatgatttctgtccggaatgccgtgccc---t +gggtctgcagggatgtgcttttcaatc--------tactatcgctgagctccagcgtct------------- +--------taaaatgaaggtaggcaaaacccgggagttttaattaa-tt--------ctt-ctt------gt +gccc-cct--------tc-acgg-ctctc----gc-tt--------------------tatt-t-------c +tttcttct----gc----------------ctcccgcgccccccg---------------------gaaaaa +aaaaaaa---------------aaaaaaa------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444112.1/17305/1-7305 |Hepeviridae isolate HEPAC171, complete genome +-------------------gcgagtga-------gc-tc-acg-------------t-----ggtcgaygc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatcccgtgttcaaactgatatcct +tattaacttgatgcaacctcgacagcttgtgttccggcctgaagtcctctggaatcatccgatccagcgagt +tatacataatgagctggagcagta---ctgccgagccc-gcgctggccgttgtcttgaagtgggtgctcacc +caagatctatcaatgataaccccaatgttctgcaccggtgctttctccgcccggttgggagagacgtccagc +gctggtattctgcccccacccgcggcccagcggctaactgccgccgttctgcgctacgcggtttgccccctg +tcgaccgcacgtactgcttcgacgggttctcccgctgcgcctttgccgctgagaccgggatcgctttgtact +cattgcatgacctttggccttcggatgtcgcggaggctatggcccgccacgggatgacgcgcttgtatgctg +ccctccatcta-ccccctgaagttctgttaccacctggaacttaccacacaacctcttatcttctgatccac +gacggcaatcgcgctgtcgtgacttatgagggggatactagtgctggctataaccacgatgtgtctatactt +cgcgcatggattcgcaccactaagatagttggtgaccacccactggtaatagagagggttcgcgccatcggc +tgccattttgttttactccttactgcagcccctgagccgtctccaatgccttatgtcccgtaccctcgttca +acagaggtgtacgttagatccatatttggtcctggc---------gggtcgccttcccttttcccgtcagcc +t----------gctctaccaagtcca-catttcatgccgttcccgtccatatctgggatcggcttatgcttt +ttggtgccaccctagatgaccaggccttttgctgctcgcggcttatgacctacctccgcggaattagctaca +aagtgaccgttggcgcacttgtcgccaacgaaggctggaatgcctcggaggatgcattaaccgctgtgatta +ctgcagcatatttgactatctgtcatcagcgctacctacgaacacaggccatttctaaaggtatgcgccggc +tagaggttgagcacgcccaaaaatttattacaaggctatatagctggttgtttgaaaagtc---------ag +gccgtgattacatccccggtcgccagctccaattttatgcgcagtgccgccgttggctctcggccggcttcc +atctggaccctagagttcttgtttttgatgaggcggtcccctgc---cggtgccggagcttcctaaagaa-- +----ggttgctgggaaattctgttgctttatgaagtggttggggcagga------gtgtacctgttttttgg +----------------agccagcagagggcttggttggtgactgtggc--------catgataacgaggcct +atgaagggtctgaggtggaccctgccgagcccgctcatcttgatgtttctgggacttatgctgtccacggcc +gtcagcttgaggccctatatagggcgcttaatatcccagatgacattgcagctcgtgcgtcacgtctgacgg +ctaccgtggagcttgccgccagcccaggcagactcgagtgtcgcacggtgcttgggaataagatcttccgta +catcaataactgatggtgcccatctcgaggccaacggtcc------------------------tgaacagt +acgtcttgacatttgatgattctcgccaagtgatgggggctgggcctcacagcctcacgtatgaactagtcc +ctgctggtctgcaggttaaaatatcttct-------aatggcttggattgtagcgctatatttcct---cct +ggcggggcgccgagcgctgcaccgggtgaagttgcggccttctgtagcgccctatataggtacaataggttt +acccagcgccattcgctgaccggtgggctgtggctgcaccctgaggggctccttggcctgttccctcctttc +tccccagggcatctttgggagtctgcaaatcctttctgcggtgagagcacactttacacacgaacttggtcc +acatctggtttctctagtgacttctctccacctgaggcggtttatgccgccccagtccccaacat----gga +gttaccctcgggtgcccccccctccgttagtgatat-----------------ctgggtgtt---------- +---------cccgccgccc----tctgaggggt--------------cggcggtcatttcgctacccataac +cccggtcggtaagccagctag---------------------------------------tccgcc------ +------------------------------------------------------------------------ +-tagccatac-------------------------------------------------------------- +-------------tacacct----aggccacctgcccgtgagccatctacaccaccatcggttctaacccca +g---------------------------------------------ccagcaggccagctatcccgcctggc +tctactgcacctagg-------------------------------------ccccccgttcgcgagccacc +cgcaccgcc--------------------------------------atcggctcgtactcgtcggc----- +-------------------ttctttatacatatcctgacggggccaaggtgtatgcaggctctttgtttgag +tcagattgttactggctggtcaatgcatctaaccctggccaccgccctggtggtggtctttgccatgcattc +taccaacgctttccagagtcgt------tccatccgaccgattttgttatgcgcgaggg---tctcgctgca +tatactttgagtccgcgtccgatcatccatgctgtggcccctgactacagggtcgagcagaaccccaagagg +ttggaggcggcatatcgtgagacctgctcccgccttggcacagctgcctatccgctacttggttcagggatt +taccaggtccctgtaggtctaagttttgacgcctgggagcgtaatcaccgcccgggtgatgaactttacctt +actgagccagctgccgcc-------------------------------------------------tggtt +tgaggctaataagcctactca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacaccgc +cc------------gcacagctaatctcgcgcttgagatcg------------actccgccactgaggtggg +tcgtgcctgc---gccggctgcactatcaaccccgggattgtccattaccagttcaccgccggggttcctgg +ctccgggaagtctaggtctatacagcagggggatgttgacgttgtggttgtgccaacccgtgagcttcgcaa +cagttggcggcgccgcggctttgctgctttcacacctcatacagctgctcgtgttactgctggccggcgtgt +ggtgatagatgaagcaccttctctcccaccgcacctgctgttgctccatatgcagcgagcctcatcagtcca +tcttcttggtgaccccaatcagatccctgccattgactttgagcacgccggtttggtcccggcgattcgccc +tgagctagcccccactagttggtggcatgtcacccaccgctgccccgctgatgtgtgtgagctcatacgcgg +agcctacccaaagattcagacaaccagccgtgtgctgagatctctattttggaacgag------cctgcgat +aggtcagaagttggttttcacgcaggcagccaaggccgccaatcctggcgcaattactgttcacgaggccca +gggggccacgtttactgagaccaccatcatagccacggccgacgctagaggtcttattcaatcttcccgcgc +acatgccatcgttgcgctcactcgccacacagaaaagtgcgttattctcgacgctcctggcctattgcgtga +ggttggcatttctgatataattgttaataacttc------------------------------ttcctggc +tggtg--gtgaagtgggccaccatcgcccttctattatccctcgcggcaacccagaccagaacttagatac- +-----cctccaagcgttccctccgtcctgccaaatcagcgcttaccaccagctggctgaggagctgggccac +cggccggccccagtggccgccatcctgcccccttgccctgagcttgagcagggtttactctacatgccgcag +gagcttacggtgtccgacagtgtcctaatttttgaactcacggacatagttcactgtcgtatggctgccccc +agtcaacgtaaggcggttctttccacgctcgtcggcaggtatggccgccgaacgaagctttatgaagcggcc +cattctgatgtccgcgagtctctgggtaggttcattcctactatcggaccggttcaggccaccacatgtgag +ctatacgagctggttgaggccatggtggagaagggccaggatggttccgctgtgcttgagctcgacctctgc +aaccgtgatgtctcgcgtattacatttttccagaaggattgtaataagtttacaacaggtgagactatcgcc +catggtaaagtgggccagggcatttcggcttggagtaaaaccttctgtgccttatttggcccatggttccgt +gccattgagaaggagattctggctctgctcccacccaacattttctatggcgatgcctatgaggagtcagtg +ctctctgcagccatttctggggctggctccagtatg---gtttttgagaacgatttttccgaatttgacagc +acccaaaataatttctctct------------------tggccttgagtgcgttattatggaagagtgtggc +atgccccaatggcttatccgactgtaccatttagttagatcagcctggattttgcaagccccgaaagagtct +ctgaaaggattttggaagaagcattccggcgagcctggcactctcctctggaacaccgtctggaacatggcg +atcatagcacactgctatgaattccgtgacctgagagtggcagcgtttaaaggtgatgactcggtggttctt +tgcagcgattaccgtcagagccgcaacgcggccactctgatagccggttgtgggctgaaattgaaggttgat +taccggcctataggtttgtatgccggcgttgtagtggctccgggcctcggggcacttcctgatgttgtccgc +tttgcaggtcgattgtctgagaagaattggggtccgggccccgagcgcgccgaacagttacgcctagcagtt +tgtgattttcttcgaaggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tgaggttagtcccgggttggtgcataaccttattggcatgctacagaccattgctgatggaaaggcccattt +tactgagactgttaagcctgtgctggatcttacaaattctatcatacagaggttagaatgaataacatgtt- +c----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcgcaatccggggctggaactcgcccta +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +cgctgtctcaccagcgcctgacacagccccagtccctgatgttgactctcgtggcgctatcctgcgccgtca +gtataatctgtccacctctcctttaacttcatctgttgcatctggaactaatcttgtcttgtatgctgcccc +gcttaaccctcttctgccccttcaggacggcaccaatactcacatcatggcgactgaggcgtccaattacgc +tcagtatcgggttgtccgggctacaatccgctatcgtcccttggtgccgaatgccgtcggtggttatgcaat +ttctatttctttctggcctcagactacaactacacccacctctgttgacatgaactccattacttctactga +tgttaggattttagtccagcctggtatagcctcagagttggtcatcccgagcgagcgtctccactatcgtaa +tcaaggctggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggcttggtcatgctttg +tattcatggctcccctgttaattcttatactaatacgccctatactggggcattggggctcctcgattttgc +actcgagcttgaatttaggaatttgacccctgggaacactaacacccgtgtgtcccgctacaccagtacagc +ccggcaccgcctgcgtcgtggtgctgatgggacagccgagctcacaaccactgcagccacacgttttatgaa +ggatttgcatttca---ccgggacaaat---ggtgtcggtgaggtgggtcgtggtatagccctaactttatt +taatcttgctgatacacttctcggtgggttgccgacagaattgatttcgtcggctggaggtcaactgtttta +ctcccgcccggttgtctcggccaatggcgagccaactgtcaaattatacacctccgtcgagaacgcacagca +ggataagggtattgctataccacacgatatagacttaggggactcccgtgtggttatacaggactatgacaa +ccaacatgagcaggaccggcccaccccgtcgccggccccatcccgtcccttttcagtccttcgagccaacga +tgtcctgtggctctc-----------------------------ccttactgcagctgaatatgac------ +cagactacttatggctcgtcgactaaccctatgtatgtttcagatactgtcacatttgt---taatgtggcg +acgggcgctcaggctgttgcccgatcccttgattggtctaaggtcactttggatggccggccactttctacc +at-----ccagcagtactctaagacattctatgtgc-tgccgcttcgtggcaagctttccttttgggaagct +ggtacgactaag--gctggctatccttataattacaacactactgctagtgaccaggttctgattgagaatg +cagccggtcac------cgtgttgctat-atctacttacactactagtctcgg--------------cgccg +gccctgtgtctgtttc-tgcggtcggcgttcttgccccgcattctgctttagctatgcttgaagatactatt +gatt---------accccgcccgtg----cccatacttttgatgatttctgccctgagtgccgtaacc---t +cggcctgcagggctgtgctttccagtc--------tactatcgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-tcc---ta------gt +gccc-cct--------tc-taat-ctccc----gc-tc-tgtt----------------att-t-------c +-tttttct----gcg---------------ttcc-------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444113.1/17193/1-7193 |Hepeviridae isolate HEPAC86, complete genome +-----------------------gtagcgacatacg-cacatg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccatcgag---caggctgctctggc +tgcggccaattccgccctggcgaatgctgtggtggttcggccgttcttgtcccgcgtccaaactgacatcct +tatcaacctgatgcaaccccggcagcttgtgttccgacctgaggtcctttggaaccacccaatccagcgagt +tatacataatgagttggagcaata---ctgccgagccc-gcgctggtcgctgccttgaggtgggcgctcacc +cgaggtctatcaatgataaccctaatgttctgcaccggtgcttcctccgcccggttggaagagacgtccagc +gctggtattctgctcccactcgtggaccagcggctaactgccgccgttccgcgcttcgcggtttgccccctg +tcgatcgcacatactgcttcgatggattctcccgctgcgcttttgccgctgagaccgggattgctttatact +cactgcatgacctctggccttcggacgttgcggaggctatggcccgccatgggatgacgcgcttgtatgctg +tcctccattta-ccacctgaggtgctgttgccacctggcacctaccatacaacctcctatctccttattcac +gacggcaaccgtgccgtggtgacttacgagggggatactagtgcgggctataaccatgatgtgtctatactc +cgtgcatggattcgcaccactaaaatagtcggtgaccacccactggtaatagagagggtccgcgccatcggc +tgccattttgttttgcttctcactgcagcccctgagccatccccaatgccttatgtcccgtaccctcgctca +acagaggtgtatgttagatccatatttggccctggt---------gggtcaccttctctcttcccgtcagcc +t----------gctctaccaaatcta-cgttccatgctgtcccggtccatatctgggaccggcttatgctct +ttggtgccaccttagatgatcaggccttctgctgctcgcggcttatgacctatctccgcgggattagctata +aagtgactgttggcgcacttgtcgccaacgagggctggaatgcctcggaggatgcactcaccgctgtgatca +ctgcagcgtacttgactatttgtcatcagcgctacctccggacccaggctatttctaaaggcatgcgccggc +tagaggttgagcatgctcaaaagtttatcacaaggttgtatagctggctgttcgaaaagtc---------ag +gccgtgactacattcccggccgtcagctccagttttatgcacagtgccgccgctggctctcggctggcttcc +atttggaccctagagttctcgtttttgatgaggcagttccctgc---cgctgccggagcttcttaaagaa-- +----ggtcgctgggaaattttgttgttttatgaaatggttgggccagga------gtgcacctgttttcttg +----------------agccagcggaaggcttggttggcgactgtggc--------catgacaatgaggcct +atgaggggtccgaggtggaccccgccgagcctgctcatcctgacgtttccgggacctatgcggtcgacggcc +gccagcttgaggctctatatagagcgcttaatatcccacatgacattgcggctcgtgcgtcacgtctgacgg +ccactgtggagcttgccgctagcccaggccgacttgagtgccgcaccgtgcttgggaataagacctttagaa +catcaataactgacggcgctcacctcgaagctaatggtcc------------------------cgagcaat +acgtcttgacatttgatgattctcgccaggcgatgggagccgggcctcacagtcttacatatgaacttgtcc +ctgctggcctacaggtaaaaatatcttct-------aatggcttggattgtaccgctatattcccc---cct +ggtggggcgccaagcgctgcaccaggtgaagtggcggccttttgcagcgccctatacaggtacaacaggttc +actcagcgtcattcgctgactggtgggctgtggctgcaccctgaggggctcctcggcctattcccccctttc +tcccctggacatctttgggagtctgcgaaccccttttgtggcgagggtacactttacacacgaacttggtct +acatccggtttttctagtgacttctccccacccgaggcggctcacgccgccccagcccctgaagc----agg +gctaccctcgggtaccccctcgtctgccagtgacct-----------------ctgggtgtt---------- +---------tccgccgccc----tctgaggggt--------------cggcggttgttccaccacctgaaac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctagtaagccagcaagcccgcctagt +cttactacacctagg-------------------------------------ccccctgcctgtaagccgtc +tataccacc--------------------------------------accagcccgtacccgccggc----- +-------------------tcctttatacttatcctgacggggccaaggtgtatgcaggctctttgttcgag +tcggattgtgactggctggttaatgcgtctaaccctggccaccgtcccggtggtggcctttgccatgcattt +taccagcgtttcccggagtcgt------tccatccgactgattttgtcatgcgtgaagg---tctcgccgca +tatactttgagcccgcgcccgatcattcatgccgtggcccccgactatagggttgagcagaaccccaagagg +ttagaggcggcatatcgtgagacctgctcccgcctcggcacagctgcatatccgctgttgggatcggggatt +taccaggtccctgtaggtctaagttttgatgcctgggaacgtaatcaccgcccaggcgatgaactttacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaacaagccaaccca--------------------------------------------------- +------------------------------------------gccagctctgacaattactgaggacattgc +tc------------gtacagccaatcttgcgcttgagattg------------actccgctactgaggtggg +tcgcgcttgc---gccggctgcactgttaaccctgggattgtccactatcagtttactgccggggttcctgg +ctccgggaagtccaggtcyatacagcagggggatgttgatgttgtggttgtgccaacccgtgagcttcgtaa +cagttggcggcgccgcggctttgctgcttttacaccacacacagcagctcgtgttactgctggccggcgtgt +tgtgatagatgaggcaccttcgctcccgccgcacctgctgctgctgcacatgcaacgagccgcatcggtcca +tcttcttggtgacccaaatcagatccctgctattgactttgagcatgccggtttggtcccagcgattcgccc +cgagcttgcccccactagctggtggcatgttacccaccgttgccccgctgatgtgtgtgagctcatacgcgg +ggyataccctaagattcagacaaccagccgtgtattgcggtctttattttggaacgag------cctgcggt +gggtcagaggctggttttcacgcaggcggccaaggcagccaaccccggtgcaattaccgttcatgaagcyca +gggcgcaacatttacaragaccaccatcatagccacggccgatgctaggggcctcattcaatcctctcgtgc +acacgccatcgttgcgcttactcgcyatacagaaaaatgcgtcattcttgacgctcccggcctactgcgtga +ggtcggcatttctgacataattgttaacaacttc------------------------------ttcttggc +tggtg--gygaagtgggccaccatcgcccttccaccatacctcgtggcaatccggrccagaatttagatat- +-----cctacgggcgtttcctccatcctgycaaattagcgcctaccaccagctggctgaggagctgggtcac +cggccggccccagtggccgctgtcctgcccccttgtcctgagcttgagcaggggttactctatatgccgcag +gagcttacggtgtccgatagcgtyttwattttcgaactcacggacatagttcactgtcgtatggccgctccc +agtcaacgcaaggcggtcctttcgacgcttgtcggtaggtatggccgccggacgaagctgtacgaggcggcc +cattctgatgtccgtgagtccttaggaaagtttatccccactattggaccagtccaggccaccacgtgcgag +ctatatgarttggttgaggctatggtggagaaaggccaggacggctccgccgtgctcgagcttgacctctgt +agccgtgatgtctcgcgcattacatttttccagaaagactgtaataaatttacaacaggcgagaccatcgcc +cacggcaaggtgggtcagggtatttcggcttggagtaaaactttctgtgctttattcggtccgtggtttcgt +gccattgaaaaagagattctggctctgctcccatccaacattttttatggcgatgcttatgaggagtcagtg +ttttctgcagccatctctggggcgggctccagtatg---gtttttgagaacgatttttctgagtttgatagt +acccagaataacttctctct------------------tggcctcgagtgtgycattatggaggagtgtggc +atgccacagtggctcatccgactgtatcatctagttagatcagcctggaccctgcaagccccgaaagagtct +ttgaaaggtttttggaagaagcactccggcgagcctggcactctcctctggaacaccgtctggaatatggca +atcatagcacattgctatgaattccgygacttgagagtggcagcgtttaagggggatgattcagtggttctc +tgcagtgattaccgccagagccgtaacgcggccaccctaatagccggctgtgggttgaaaytgaaggttgat +taccgccctataggtttgtatgctggygttgtagtggctccgggtctcggggcactccctgacgtcgtccgg +tttgccggccgactgtccgagaagaactggggtccgggccccgagcgcgccgaacagttgcgtctagcagtt +tgtgattttcttcgagggctgacgaatgttgcgcaagtttgtgttgatgtggtatcccgtg-------ttta +cggggttagccccgggctggtgcataaccttatcggcatgctgcagactattgctgatggaaargcccattt +tactgaaactgtcaagcctgtgctggatcttacaaactctatcacacagaggttggaatgaataacatgtt- +c----------------tctgcatcgcccatggg------------atcgtcatgcgccctagggctgttct +gytgttgttcctcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccrrccagcygtctggcc------------gccgtcgtgggcg-gcgcagcrgcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccrccgatgtcgtatcacaacccggggctggagctcgccctc +gacaaccggcccg---------------ccccctcggctcttcttggcgcgaccagtccca----------- +------gcgcccccccgctacctcccgtcgtcgatctacccca---------actggggctgcgccgttaac +tgctgtttcaccagcgcctgatacagccccagtccctgatgttgattctcgtggcgctattttgcgccgcca +gtataatttgtccacctcccctttgacttcatctgttgcctcgggaactaatcttgttttgtatgctgcccc +tcttaatcctcttctgcctcttcaagatggtactaacactcatattatggcgactgaggcgtctaattacgc +ccagtaccgggttgttcgggctacaatccgctaccgccctttggtgccgaatgctgtcggtggttatgcaat +ctctatctctttctggccccagacaacaactacacccacctctgttgatatgaactctattacttctactga +tgttaggattttagtccagcctggcatagcctctgagctggttatcccgagtgagcgtcttcactatcgtaa +tcagggctggcgctctgtcgagacctcgggtgtggccgaggaggaggcaacgtctggtttggtcatgctttg +tatccatggttcccctgttaattcttataccaacacgccctataccggggcattggggctcctcgattttgc +actcgagcttgagttcaggaaccttacccctggtaataccaacacccgtgtgtcccgctatactagtacggc +ccgacaccgtctgcgtcgtggtgccgatgggacagcygagctcacaactactgcagccacacgttttatgaa +ggacttgcatttta---ccggaacaaat---ggcgttggtgaggtaggtcgtggtatagccctaacgttatt +taatcttgctgacacacttctcggcgggctgccgacagaattgatttcgtcggctggaggtcaattatttta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagctatacacctctgtcgagaatgcacagca +ggacaagggtattgctataccacatgatatagatttaggggactcccgtgtggttattcaagactatgacaa +ccaacatgaacaggaccggcctaccccttcgccggctccgtcccgcccattctcggtccttcgagctaatga +tgtcttgtggctctc-----------------------------gctgactgcagctgaatatgat------ +caggctacttatggctcgtcgaccaaccccatgtatgtttcagacaccgtcacatttgt---taatgtggcg +acaggcgcccaggctgttgcccgttctcttgattggtctaaggttaccttggatggccggccgcttactacc +at-----ccagcagtactctaagacattttatgtgc-tgccgcttcgcggcaagctttccttttgggaagct +ggtacgactaaa--gctggttacccttataactataatactactgctagtgaccagatcttggttgagaatg +cagccggccat------cgtgttgccat-atctacttatactactagtcttgg--------------tgctg +gccctgtgtctgtttc-tgcggtcggcgtgctcgcccctcattctgtcttagctgtgcttgaagatgctatt +gact---------accccgctcgtg----cccatacttttgatgatttctgccctgagtgccgcaatc---t +cggcctacagggctgtgctttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaaattaatt----cc-ccct-ttt------gt +gccc-cct--------tc-taag------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444114.1/17148/1-7148 |Hepeviridae isolate HEPAC96, complete genome +---------------------------------------------------------------gtcgatgc- +---catggaggcccatcagttcatcaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagatcct +tatcaatttgatgcaacctcggcaactggttttccgacctgaagtgctttggaatcatcctatccaacgggt +aattcacaatgaactagaacagta---ctgccgggccc-gggctggtcgttgtctagaagttggagcccacc +caagatccatcaatgacaacccgaatgttttgcaccggtgcttcctacgaccagttgggagggatgttcaac +gttggtactctgcccccacccgtggccctgcggccaattgccgccgttccgccttgcgtggcctcccccccg +ttgaccgtacctattgttttgacgggttttctcgctgctcgttcgctgcagaaaccggtgttgccctctatt +ctctgcatgacctctggccggccgatgttgcggaggccatggcccgacacggcatgacacgtttgtacgctg +cactacacctc-cctcctgaagtactacttccacctggtacctaccatacaacttcatatcttctgattcac +gacggtgatcgtgctgttgtgacctatgaaggtgatactagtgcaggttacaatcatgatgtytccatactc +cgcgcgtggatccgcacgactaagatagttggcgaccatccgctggtgatagagcgtgtgcgggctattggc +tgccattttgtgctgctgctcactgcagcccctgaaccgtcaccaatgccctatgtcccgtacccccggtcg +acagaggtgtatgtccgctctatattcggccctggt---------gggtccccgtctttgtttccatcagct +t----------gctctacaaaatcca-catttcatgctgtcccagtccatatttgggaccggctcatgctct +ttggtgccaccctggatgatcaggcgttttgctgctcgcgtcttatgacttatctccgtgggattagctata +aggtcactgttggcgccctcgttgctaacgaggggtggaatgcctcggaggacgctctcaccgctgttatca +ccgcagcgtatctgaccatctgccatcagcgttacctccgcacccaagctatatctaagggcatgcgccggc +ttgaggttgagcatgctcaaaaattcatcacgagactctacagctggctgtttgaaaagtc---------tg +gccgtgactacatccccggccgccagctccagttttatgcacagtgccgccgctggttatcagcgggyttcc +acctcgatcctagggtgcttgtttttgacgagtctgtgccctgc---cgctgccggacgtttcttaagaa-- +----ggttgcaggtaaattctgctgttttatgaagtggttggggcagga------gtgtacctgctttctag +----------------aaccagcagagggcctcatcggcgaccatggc--------catgataatgaagcct +atgagggctctgaggtcgaccaggctgagcccgctcactttgatgtttctggaacttatgccgtccacgggc +gtcaacttgaggccttatatagggcgcttaacatcccgcacgacattgctgctcgagcttcccgtttaactg +ccaccgtcgagctcgtcgcgggcccagatcgcctggaatgtcgcactgtgctcggaaataagactttccgga +caacggtggttgatggcgcccatcttgaggcgaacggccc------------------------cgagcagt +atgtcctttcgttcgacgcctcccgccagtctatgggggccgggtcgcacaacctcacctatgagctcactc +ctgccggcttgcaggttaagatttcatct-------aatggtctggattgtactgcgacattcccc---ccg +ggcggcgctcctagcgctgctccgggcgaggtggcagctttttgcagtgctctttataggtataacaggttc +acccagcgacactcgcttacaggcggcttgtggctgcatcctgaggggctgctgggcatcttcccccctttt +tctcccgggcacatctgggagtccgccaacccattttgtggggaaggaacrttgtacacccggacttggtca +acatctggcttttctagtgacttttcccccccagaggcagctgtcgctgcaccggctgctgctct----ggg +gctacccc---actctacaccccctgttagtgacat-----------------ttgggtgct---------- +---------gccgccaccc----tcagaagaat--------------ctcaggttgatgctgtgccagcccc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctcctgagcccgcccagccgcccagc +cctgctgggccaaag-------------------------------------actcccgtgcgtaagccatc +attaccacc--------------------------------------gcccccgcgcacccgtcgcc----- +-------------------tcctttacacctacccggacggggcaaaggtgtacgcggggtcactgtttgag +tctgactgtgattggctggttaatgcatcgaaccctggccatcgtcccgggggyggcctttgccatgctttt +taccaacgctacccagagtctt------tccacccaactgagttcatcatgcgcgacgg---tctcgccgca +tacactttgaccccccggcctattattcacgcagtggcccctgactatagggtcgagcagaacccaaagagg +cttgaggcagcataccgagagacttgctctcgtcgcggtaccgccgcctacccgctccttggctcgggcata +tatcaagtccccgtcagcctcagctttgacgcttgggagcgtaaccaccgccccggggacgagctttacctg +actgaccccgccgctrcc-------------------------------------------------tggtt +tgaggccaacaagccgacaca--------------------------------------------------- +------------------------------------------gccggcccttacaataactgaggacacagc +cc------------gtacagccaacctagcactggagatcg------------atgctgctacggaggtcgg +ccgggcctgt---gccggctgtacagttagacccgggattgtgcactatcaatttaccgccggggttccagg +ttccgggaaatcgcggtcyatacagcagggggaygtygatgtggtggttgtccccactcgggagcttcgaaa +tagttggcgtcgccggggttttgcagcttttacacctcacacggccgcccgtgtcaccacgggccgtcgygt +tgtgattgacgaggccccrtcccttccaccgcacttgttgctactgcatatgcagcgtgcttcgtcggtcca +tcttcttggcgacccaaaccaaatccctgccatagactttgagcatgccggcctcgtccccgcaatacgccc +cgagcttgcacctaccagctggtggcatgtcacccaccgctgccccgctgatgtttgcgagctcatacgtgg +ggcttaccccaaaatccagaccaccagccgcgtgttgcggtctctattctggaatgag------cctgccat +tggtcaraagttagtattcacgcaggccgctaaggctgctaaccctggtgcgatcacagtccaygaggccca +gggcgccacctttacggaaaccacagttatagccacggctgacgccagggggcttatccaatcatctcgagc +tcacgctatagtcgcactcacccgccacacagagaagtgcgttattcttgatgcccccggcctgctccgtga +ggttggtatatcggatattatcgttaataatttc------------------------------ttcctcgc +tggcg--gggaagtgggccatcaccgcccctctgtgataccccgtggtagtcctgactcaaaccttgcgac- +-----gttacaggcctttccaccttcctgtcaaattagcgcttaccatcagttagcagaggaactaggccac +cgcccagcccctgtcgctgctgtcttgcctccctgccctgaacttgagcagggcttgctatacatgccgcaa +gagcttacagtgtctgacagcgtgctggtctttgaactcacggacatagttcactgccggatggccgcccct +agtcagcggaaggccgtcctatcgacgcttgtcggtaggtacggccgtcggacgaagctgtatgaagcggct +cattccgacgtccgcgagtccctggctagatttatccctaccatcgggcccgtccaggccaccacgtgtgag +ttataygagctggttgaggccatggtggagaagggtcaggatggctcagccgtgcttgagctcgacctttgc +aaccgtgatgtatcgcgtatcacatttttccagaaagattgtaacaagttcaccacgggggaaaccattgct +cacggtaaggtcggtcagggtatttcagcttggagtaagaccttctgtgccttgtttggcccgtggttccgt +gccattgagaaggagatactggccctgctcccgcctaatatcttctacggcgatgcatatgaggagtctgtg +tttgcagccgctgtatctggggcaggttcatgcatg---gtatttgagaatgatttctctgagtttgatagc +actcaaaacaatttttccct------------------tggtctcgagtgtgtaattatggaggaatgtggc +atgccccagtggctaattcagttgtaccacctagttcggtcggcctggatmttacaggcgccgaaggagtct +ctcaaaggattttggaagaagcattctggygagcccggtactctcctttggaataccgtctggaatatggcg +atcatagcacattgctatgaattccgtgatttaagggttgctgctttcaagggagatgattcggtggtcctc +tgcagtgactaccgtcaaagccgtaatgcagcagccttgattgcaggctgcgggctcaagttgaaggttgat +tatcgccctattgggttgtatgctggtgtggtggtagctcctggtctggggacgctacctgatgtagtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggctgagcagttgcgccttgctgtt +tgtgacttcctccgagggctgacgaatgttgcgcaggtatgtgttgatgttgtatctcgtg-------tcta +tggagttagtcctgggctggtacataaccttattggcatgctgcaaactattgctgatggtaaggcccactt +tacagagactgttaaacctgtgcttgacctcacgaattctatcatacagcgggtggaatgaataacatgtc- +t----------------tgtgcatcgcccatggg------------atcgccatgtgccctagggctgttct +gttgctgttcctcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccaccgatgtcgtttcgcaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggttcctcttggcgtgaccagtccca----------- +------gcgccccgccgctgccccacgccgtcgatctgcccca---------gctggggctgcgccgttgac +ctccgtatcacctgctcccgatgcagcccctgtgcccgatgttgattcgcgcggcgctatattgcggcgcca +gtataatttatccacatccccacttacgtcatctgtcgcttcrggtactaatttggtcctttatgctgcccc +gttaaatcctctgctaccccttcaagatggcactaacacccatattatggctactgaggcgtctaattatgc +ccagtatcgggttgtccgagccacgatccgatacaggccgctggtgccaaatgctgttggtggttatgcaat +atctatttcattttggccccagactactactacccccacgtctgttgatatgaattctattacttctactga +tgttaggattctagttcagcccggtattgcttccgagctggtcattcctagtgagcgtctccactatcgtaa +ccagggttggcgctctgtggagacctcgggtgtggctgaagaggaggctacttctggtctggtgatgctttg +tatccatggttctcctgttaattcttacaccaacaccccctacactggggcgcttgggctccttgattttgc +tttagagcttgaatttaggaacttgacacccgggaacactaacacccgtgtctcccggtatacaagtacagc +ccgtcatcggctgcgccgcggtgctgacggcaccgctgagcttaccaccacagcggccacgcgttttatgaa +ggacctgcacttca---ccggcacgaat---ggggtcggtgaggtgggccgtggtattgccctcacactctt +taatcttgctgacacgcttcttggcggtttgccgacagaattaatttcgtcggctgggggacagctgttcta +ctcccgccccgtcgtctcagccaatggcgagccgaccgttaagttgtatacatctgtagagaatgcgcagca +ggataaagggattgccatcccacatgacatagacctgggtgattctcgtgtggtcattcaggactatgataa +ccagcatgaacaggatcggcccaccccttcgcctgccccatcccgccctttctcggttcttcgtgctaatga +tgttttatggctctc-----------------------------cctcaccgctgctgagtatgac------ +cagactacctacgggtcgtccaccaacccgatgtatgtctcggatactgtcacgttcgt---caacgtggcc +acaggggcccaggctgttgcccgttctcttgactggtctaaagttaccttggatggccgtccccttaccgcc +at-----ccagcagtactctaaaacattttatgttc-tcccgctccgcgggaagttatccttttgggaggcc +gggacgactaag--gccggctacccttataattataatacaactgctagtgaccagattctgattgaaaatg +caactggtcac------cgtgttgctat-ctccacctataccactagcctgag--------------cgccg +gccccgtgtcaatctc-tgcggtcggtgtgttagccccacattcggcccttgcagttcttgaggacactact +gact---------accctgctcgcg----cccacacttttgacgacttctgtccggagtgccgcgctc---t +tggtttgcaggggtgtgctttccagtc--------cactattgctgagcttcagcgcct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattat-tt----c--ctt------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444115.1/17176/1-7176 |Hepeviridae isolate HEPAC44, complete genome +-------------------------------------tgtatg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccatcgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaacctcggcagttggtttttcgacctgaagtgctctggaaccatcctatccaacgggt +tatccataatgaacttgaacagta---ctgtcgggccc-gggctggtcgttgtttagaggttggggcccacc +caagatctattaatgacaacccaaatgttctgcaccggtgctttctacgaccagttgggagagatgttcagc +gytggtactctgctcctacccgcggccctgcggctaactgccgccgttctgccctgcgtggcctcccccccg +ttgatcgyacctattgttttgatggattttcccgctgctcatttgccgcagagactggggttgctctctatt +ctttacatgacctctggccggccgatgttgcggaggctatggcccgacacgggatgacacgcttgtatgctg +cactacatctc-ccccctgaagtactactaccacccggtacttaccatacaacttcataccttctgattcac +gatggcaatcgtgctgttgtgacctatgaaggtgatactagtgcaggctacaaccatgatgtttccatactt +cgtgcatggatccgcacaactaagatagtcggcgaccatccgctggtgatagagcgtgtgcgggctattggc +tgccattttgtgctgctgcttactgcagcccctgagccgtcaccaatgccttatgtcccatacccccggtcg +acagaggtgtatgttcgctctatatttggccctggc---------gggtccccatccctattcccatcagct +t----------gctctacgaaatcta-catttcacgccgtcccggttcacatttgggaccggctcatgcttt +ttggcgctactctggatgatcaagcgttttgttgttcacggcttatgacctacctccgcgggattagttaca +aggttacygttggcgcccttgtcgctaatgaggggtggaatgcttcggaggacgctcttaccgctgttatta +ctgcagcgtatttgaccatctgccatcagcgttacctccgtactcaagctatatccaagggtatgcgtcgac +tggaggttgagcatgctcaaaaattcattacaagactttatagttggctgttcgagaagtc---------tg +gccgtgactatatccccggccgccagctccagttctatgcacagtgccgccgttggttatcggcaggttttc +atcttgacccaagggtgcttgtttttgatgagtctgtgccttgc---cgttgtaggacattyttaaagaa-- +----ggctgtgggcaagttttgctgttttatgaagtggctgggacagga------gtgtacctgctttttgg +----------------aaccagcagagggtctagttggcgaccatggc--------cacgataatgaagcct +atgagggctctgaggtcgatcaagccgagcccgcccatctcgatgtctctgggacttatgccgtccatggcc +gtcaacttgaggccctgtatagggcgcttaacatcccgcatgacatcgctgcccgagcctcccgtttgactg +ccaccgtcgaactcgttgcaggtccagaccgtttggagtgccgtactgtgcttgggaataagactttccgga +cgacggtggttgatggcgcccatcttgaggcgaacggccc------------------------cgagcagt +acgttctctcgtttgacgcctctcgccagtctatgggggccgggccgcatagtctttcctacgagctcactc +ctgcwggtctgcaggtcaagatttcatct-------aatggcctggattgcactgcaacattcccc---cct +ggcggggcccctagcgctgctccgggggaggtggcagccttttgcagtgccctttacaggtacaataggttc +actcagcgccattcgcttataggtggcttgtggctgcatcctgaggggttattgggtatcttcccccctttc +tctcccgggcacctctgggagtccgctaaccctttttgtggggagggaaccttgtacacccggacatggtca +acatctggtttttctagtgacttttccccccctgaggcagccgtcgcagcgccggctgctacttc----ggg +gytaygcc---accctacacctcctgatagtgccat-----------------ttgggtgtt---------- +---------accgccacct----tctgaagaat--------------ttcaggttgacacagcgcccgctcc +ctctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcccgctcaaccatctagc +cccgccgggccgaag-------------------------------------gctcccgtgcgtaagccgcc +aacgccacc--------------------------------------atccccgcgcacccgccgcc----- +-------------------ttctttatacctatccggatggggcaaaggtgtatgcggggtcactgttygag +tctgactgtgattggctggttaatgcgtcgaatcccggccatcgtcctggcggcggcctttgccatgctttc +taccaacgctaccccgagtctt------tccacccaactgagttcattatgcgcgacgg---tcttgccgcg +tacactttaactccccggcctattatccatgcagtggcccctgattatagagttgagcataacccaaagagg +cttgaggcagcataccgagagacttgctctcgccgcggcaccgccgcctacccactcctcggctcgggcata +tatcaagtccccgtcagtctcagctttgacgcttgggagcgtaaccaccgccccggggacgagctctatcta +accgacctcgccgccacc-------------------------------------------------tggtt +tgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------gccggcccttacaataactgaggatgcagc +cc------------gcacagccaacctagcgctggagatcg------------atgctgctacggaggtcgg +ccgggcttgt---gccggctgtgcagttagtcctgggattgtgcactatcagtttactgccggggtcccagg +ttcggggaagtcgcgttctatacagcagggggatgttgatgtagtggttgtccccactcgggagctycggaa +tagttggcgtcgccggggtttcgcagcttttacacctcatacggcggcycgtgtaaccacgggccgtcgtgt +tgtgattgatgaggccccatcccttccgccgcatttgttgctactacacatgcagcgggcctcgtcggtcca +cctcctcggygacccaaaccagatccctgctatagayttcgagcacgccggcctggtccccgcaatacgccc +tgagcttgcacccaccagttggtggcatgtcacccaccgctgccccgctgacgtgtgcgagcttatacgcgg +ggcttayccmaaratccagaccactagccgcgtgctgcgatctttattctggaatgag------cctgccat +cggccagaagttagtttttacccaggctgctaaggccgccaaccccggtgcgatcacagtccacgaggccca +gggcgccactttcacggaaactacaatcatagccacagctgatgccagggggctcatccaatcttcccgagc +acatgccatagttgcacttacccgccacacagagaagtgcgttattcttgacgcccccggcttgttacgtga +ggttggtatatcggatgtgattgtcaacaatttt------------------------------ttcctcgc +cggcg--gggaggtaggtcaccatcgcccctctgtgatacctcgcggtaatcctgaccagaacctcgcgac- +-----actacaggcctttccaccttcctgccagattagtgcctatcaccagttagctgaggagcttggccac +cgcccagctcccgtcgccgctgtcctgcccccttgccctgaacttgagcaaggtttattatatatgccgcag +gagcttacggtgtctgatagcgtgctggtctttgaactcacggacatagtccactgccggatggctgcccct +agccagcggaaggccgtcctatcgacgcttgtgggtaggtacggccgtcggacgaagttgtatgaagcagcc +cactctgacgttcgtgagtccctggctagattcatccccaccattgggcccgttcaggctactacgtgtgag +ttatatgagctggttgaggccatggtggagaagggtcaggacggctctgccgtgcttgagcttgacctctgc +aatcgtgatgtatcgcgtatcacgtttttccagaaagattgtaataaattcaccacaggggagaccattgcc +cacggtaaggtcggccagggcatctcggcctggagtaagaccttctgtgccctgtttggtccgtggtttcgt +gctattgaaaaagaaatactagccctgctcccgcctaatatcttctacggcgacgcatacgaagagtctgtg +tttgccgccgctgtgtcaggggcaggctcaagcatg---gtatttgagaatgatttttcagagtttgatagc +acccaaaataacttctccct------------------tggcctcgagtgtgtagttatggaggaatgtggc +atgccccagtggctgatccggttgtaccatctggtccggtcggcctggatcctacaggcgccgaaggagtct +cttaagggattttggaagaagcaytctggygagcccggtaccctcctttggaacactgtttggaatatggcg +atcatagcacactgctatgagtttcgtgattttagggttgccgcttttaagggagatgactccgtggtcctc +tgcagcgactatcgtcagagccgcaatgcagcggccctgattgcaggttgcgggctcaaactgaaggttgat +tatcgccccattgggttgtatgctggtgtggtggtggcccctggtctggggactctacccgatgtggtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggctgagcagttgcgcctagctgtt +tgtgatttccttcgagggttaacgaatgttgcgcaggtatgtgtcgatgttgtatcccgag-------tcta +tggagtcagccctgggttggtacataaccttattggcatgctgcaaactatagctgatggcaaagcccactt +tacagagactgttaaacctgtgcttgacctcacgaactctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtaccgcaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgttgtcccacgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgccatttcgcctgcccccgatacagcccctgtgcctgatgttgactctcgtggcgctatattgcggcgcca +gtacaatttatccacatccccgctcacatcatctgttgcttcgggtactaatctggtcttgtatgctgcccc +gctaaacccattgctgccccttcaggatggcactaacactcacatcatggccactgaggcatctaattatgc +ccagtatcgggttgtccgagctacgattcgttacaggccattggtgccaaatgctgtcggcggttatgcaat +atccatctcattttggccccagactactactacccccacgtctgttgatatgaactctattacttccactga +tgttaggattctggttcagcccggcattgcttctgagttggttatccctagtgagcgcctccattatcgtaa +ccagggctggcgctctgtggagacctcgggtgtggctgaagaggaggctacttctggtttggtaatgctttg +tatccatggctcccctgttaattcctacaccaataccccctataccggggcgcttgggctccttgattttgc +tttagagcttgagtttaggaacctgacacccgggaacaccaacactcgtgtgtcccggtatacaagcacagc +ccgtcatcggctgcgccgcggtgctgatggcaccgcggagcttactaccacagcggccacgcgcttcatgaa +ggacttgcacttca---ccggtacgaat---ggggtcggtgaggtgggtcgtggcattgccctcacactctt +taatcttgctgacacgcttctcggtggtttgccgacagaattgatttcgtcggctggaggacagttattcta +ctcccgccccgtcgtctcagccaatggcgagccgactgtcaagctatatacatctgtagagaatgcgcagca +ggataaagggatcgctatcccacatgacatagatctgggtgactcccgtgtggtcatccaagactatgacaa +ccagcatgagcaggatcgacccaccccctcgcctgccccttctcgccctttttcggttcttcgcgctaatga +tgttttatggctttc-----------------------------tcttactgccgccgagtatgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctcggatactgtcacatttgt---caacgtggct +acaggagctcaggctgtcgcccgttcccttgactggtctaaagttactctggacggccgccctcttactact +at-----ccagcagtactccaaaacattttatgttc-tcccgcttcgcgggaagttatccttctgggaggcc +gggacgactaag--gccggctacccctataattataatacaactgccagtgaccagattctgattgaaaatg +cggctggtcat------cgtgttgctat-ttccacgtataccaccagcttggg--------------cgcag +gccctgtgtctgtttc-tgcagttggtgttttagccccacattcggcccttgcagtacttgaagacactatt +gatt---------accctgcccgtg----cccacacttttgatgatttttgcccggagtgtcgcgctc---t +tggtttgcaggggtgtgccttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagttttaatcaa-tt----t--cctt---t------gt +gccc-cct--------tc-atag-ctt--------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444116.1/17175/1-7175 |Hepeviridae isolate HEPAC157, complete genome +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggtccggccrtttttgtcccgtgtccagactgagatcct +tattaatctgatgcaaccccggcagcttgtgttccgacctgaagtcctctggaaccatccgattcagcgagt +catacataatgagctggagcaata---ctgccgagccc-gcgctggccgctgtcttgaggtcggtgcccacc +caagatctatcaatgataaccccaacgttctgcaccggtgctttctccgcccggtcggtagagacgtccagc +gctggtattctgcccctactcgcggtccagcggccaattgccgccgttctgcgctacgcggtctgccccctg +tcgatcgcacatactgcttcgacgggttttcccgctgcgcttttgccgctgagaccgggatygccttatact +cactgcatgacctttggccctcrgatgttgcggaagctatggcccgccacgggatgacgcgcttgtatgctg +ccctccacctg-ccccctgaggtcctgttaccacctggcacttaccacacaacctcctatcttttgattcac +gacggcaatcgtgccgtcgtgacttatgagggggacacaagtgcaggctacaaccacgatgtgtctatactt +cgtgcatggatccgcaccactaaaatagttggtgatcacccgttggtaatagagagggttcgcgccatcggc +tgccattttgttctactccttacagcagcccccgagccatccccgatgccttatgttccgtaccctcgttca +acagaggtttatgttagatccatctttggccctggt---------gggtcrccttctcttttcccgtcagcc +t----------gctctaccaagtcta-cattccatgctgttccggttcatatttgggaccggctcatgcttt +ttggtgccactttagatgaccaggccttctgctgctcgcggcttatgacctatctccgcggaatcagctata +aagtgaccrttggcgcacttgtcgccaacgagggctggaatgcctcagaggatgcgcttaccgctgtgatta +ctgcagcgtacctgactatctgtcatcagcgctacctacggacacaggccatttccaaaggcatgcgccggt +tagaggttgagcacgcccaaaarttcatcacaaggctatatagctggctgtttgaaaagtc---------gg +gccgtgactacatccctggtcgccagcttcagttttacgcacagtgccgccgttggctttcggctggctttc +atctggaycccagagttctcgtcttcgaygaggcggtcccctgc---cgctgccggagcttcctaaagaa-- +----agttgccggaaaattttgctgtttcatgaaatggttggggcagga------gtgtacttgttttctgg +----------------agccagcagaaggtctaattggcgattgtggc--------catgataacgaggcct +acgaagggtctgaagtggaccccgccgagcctgctcaccttgatatttctgggacctatgcggtccatggtc +gccagcttgaggctctatatagagcgcttaatatcccggacgacattacggctcgtgcgtctcrtctaacag +ctactgtggaacttgccgccagcccaggccgcctcgagtgccgtacggtgctcgggaataagacttttcgta +catcaataactgatggtgcccacctcgaagccaacggccc------------------------cgagcagt +aygttttgacatttgatgactctcgccaggcaatgggggctgggcctcacagcctcacatacgaacttgtcc +ctgctggtttgcaagttaaaatatcgtcc-------aatggcttggattgtaccgctacattccct---cct +ggcggggcgccgagcgccgcaccaagtgaggtggcagctttctgcagcgcyttatacaggtacaataggttt +acccagcgccattcgytgaccggtggactgtggctgcaccccgaggggcttctcggcctgtttcctcctttc +tccccggggcatctatgggagtccgcaaaccccttttgcggtgagagtacactttatacacgaacttggtct +acatctggtttttcaagcgacttctccccacctgaggcggctcacgccgccccagtccttgacat----agg +gctaccttcgrgagycccctcatctgttagcgatgt-----------------ctgggtgct---------- +---------tccaccgccc----tctgagrggt--------------cgacggttgccccactgcccgaaac +tccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtaagccagctaactcgcctagc +tgcactacgcctagg-------------------------------------ccccccgctcgtaagccgcc +tacaccacc--------------------------------------gccggcccgcacccgccggc----- +-------------------tcctttatacataccctgacgggtccaaggtgtatgcgggctctttgtttgaa +tcarattgtgactggctggttaatgcatctaaccctggccaccgccctggtggcggcctktgccatgcattt +taccagcgtttcccggagtcgt------tccatccggctgattttgtcatgcgtgaagg---tctcgccgca +tacactttgagcccgcgtccgattattcatgctgtcgcccccgactatagagttgaacagaaccccaagagg +ctagaggcggcatatcgtgagacctgttcccgcctcggcacagctgcctacccgctactgggatcggggatt +taccaggtcccggtaggcttaagcttcgacgcctgggagcgtaaccaccgcccgggcgatgaactttatcta +actgagccagctgccgcc-------------------------------------------------tggtt +cgaagccaataagccaaccca--------------------------------------------------- +------------------------------------------gccagctctaacaattactgaagatactgc +cc------------gcacagctaaccttgcgcttgagatyg------------actccgctactgaggtggg +ccgtgcttgc---rcaggctgcaytattaaccccgggattgtccattaccagtttaccgccggrgttcctgg +ctccgggaaatctaggtctatacagcaaggrgatgtcgatgttgtgrttgtgccaactcgtgagcttcgtaa +cagttggcgacgccgtggctttgctgcttttacacctcatacagcagctcgtgttaccrccggtcggcgtgt +ggtgatagatgargcrccttcgcttccgccgcatttgctgctgcttcatatgcaacgagcctcatcggtcca +tctccttggtgaccccaatcagatccctgccattgactttgagcaygcyggtctrgtcccagcratccgccc +tgagctcgcccccaccagttggtggcatgtcacccatcgytgccccgccgatgtgtgcgagctcatacgcgg +agcttatccaaagattcagacgaccagccgtgtgytgcgatctttattctggaaygag------cccgcrgt +gggtcagaagttggttttcacgcaggcagccaaggcggctaaccctggtgcaattaccgttcatgaggccca +gggtgccacgtttacggagactaccatcatagccacagctgatgctagaggtcttattcaatcctcccgtgc +gcacgccattgttgcactyactcgccacacagaaaaatgtrtcattctygacgcccctggccttttgcgtga +ggtcggcatttctgatataattgttaayaayttc------------------------------ttcytggc +tggtg--gtgaggtgggccaccatcgcccttccgcyataccccgcggcaatccagatctgaacttagacac- +-----cctacgagcattyccyccgtcctgccaaattagtgcctaccaccagctggctgaggagttgggccac +cggccggcyccagtggccgcygttctacccccttgccctgagcttgagcaggggytactctacatgccrcag +gagcttacgrtgtccgatagtgtcctaatttttgaactcacggacatagttcattgtcgtatggctgccccc +agtcagcgtaaggcggtactttcgacgctygtyggtaggtacrgccgccgaacgaagttgtatgaggcggcc +cattctgatgttcgtgagtctttaggaagattcatccccactatcgggcccgtycaggccaccacgtgcgaa +ctatacgagctrgttgaggctatggtggagaagggtcaggacggctctgccgtgctcgagcttgacctctgc +agccgtgatgtctcgcgcattacattctttcagaayrrytgtaataaatttacaacaggtgaaactattgcc +catggcaaggtgggccagggcatttcggcctggagcaaaaccttctgcgccttattcggcccgtggttccgy +gccattgagaaggagattctggctctgctcccacccaatattttctacggcgatgcctatgagragtcagtg +ttctctgcagccatttctggggccgrctccagcatg---gtttttgagaacgatttttctgagtttgacagc +acccaaaacaatttttctct------------------tggccttgagtgcgtcatcatggaggagtgyggc +atgccccagtggcttatccgattgtatcacttggttcgatcagcctggactctgcaagccccgaaagagtct +ttraaagggttttggaagaagcattcyggcgagcctggcactctcctttggaacaccgtctggaayatggcg +atcatagcacactgctatgaattccgtgacttgagagtggcagcgtttaarggggatgattcggtggttctc +tgcagtgattaccgccagagtcgtaatgcagccaccctgatagccrgttgtgggttgaaattgaarrttgat +taccgccctatgggtctgtatgccggtgttgttgtggccccggrcctcggtgcacttcctgatgttgtccgg +tttgccggtagattatctgagaagaactggggcccgggcccygagcgcgccgaacagttgcgcctagcrgtt +tgtgacttycttcgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttatcggcatgytacagactattgctgacggaaaggcccattt +tactgagaccgtcaaacctgtacttgatcttacaaattctatcatacagaggttggaatgaataacatgtt- +t----------------tgtgcatcrcccatggg------------atcrccatgcgccctagggctgttct +gttgctgttcttcgtgcttttgcctatgctgcccrcgc---------------------------------- +-caccgg------ccggccagycgaytggyc------------gccgtcgtgggcg-gcgcarcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttrccrccgacgtcgtatcacaacccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgccccyccgctacccyccgtcgtcgatctacccca---------gctggggctgcgccgttgac +tgctgtttcaccagcgcctgacacggycccagtccctgacgttgactctcgtggcgccatcctgcgccgcca +gtataatctgtccacttcccctctaacctcatctgttgcttctgggactaaycttgtyttgtatgccgcccc +gcttaatcctcttctgcctctccaagacggcacaaayactcacatcatggcaactgaggcatccaattacgc +ccagtatcgggttgttcgggcyacaatccgttatcgccctctggtgccgaacgccgtcggcggttatgcaat +ttctatttccttttggcctcagactacaaccacacccacctccgttgatatgaattctattacttctactga +tgttagrattttggtccagcctggtatagcctctgaattggtcatccccagtgagcgccttcattatcgtaa +tcaaggctggcgctctgttgaaacatcgggtgtggccgaggaggargcgacatctggcttggtcatgctctg +cattcacggctctcctgttaattcctacaccaacacgccctataccggggcattggggcttcttgactttgc +acttgaacttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgctataccagcacagc +ccgacaccgtctgcgccgcggtgctgatgggacagccgarcttacaaccactgcagctacacgytttatgaa +rgacttgcatttca---ccgggacaaat---ggtgttggtgaggtgggccgtggcatagccctaacgttatt +taatcttgctgacacacttctcggcgggctgccgacagaattgatttcgtcggctggaggccagttgttcta +ctcccgcccggttgtctcrgccaatggcgagccgactgttaaattatacacctctgtcgagaatgcgcagca +ggacaagggtattgccataccacacgatatagatttaggggactcccgtgtggttatacaagactatgacaa +ccaacatgaacaggaccggcctaccccgtcaccggccccgtcccgccctttttcggtccttcgagccaatga +tgtcttgtggctctc-----------------------------tttgaccgcggctgaatatgat------ +cagactacttatggctcttcaaccaaccccatgtatgtctctgatactgtcacatttgt---taatgtggcg +acaggtgcccaggctgtagcccgttcccttgattggtccaaggtcaccctggatggccggccactcaccacc +at-----ccagcagtactccaagacattttatgtgc-tgccgcttcgtggcaagctttccttttgggaagct +ggcacgactaag--gctggctacccctataactataatactactgctagtgaccagattttgattgagaatg +cagcaggtcac------cgtgttgctat-atctacttatactactagtctcgg--------------tgccg +gccctgtgtctgtttc-tgcggtcggcgttcttgccccgcactctgctttagctgtgcttgaagataccatt +gact---------atcctgcccgcg----cccacacttttgatgatttctgccctgagtgccgtaatc---t +cggattgcagggctgcgctttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----tc-ccct-ttt------gt +gccc-cct--------tc-taaa------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444120.1/17197/1-7197 |Hepeviridae isolate HEPAC56, complete genome +-------------------------------------------------------at-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccttggcgaatgctgtggtggttcggccgtttttatctcgtttacagaccgagattct +tattaatttgatgcaaccccggcagctggtctttcgacctgaggtgctctggaaccatcccatccaacgtgt +tatacataatgaattggagcagta---ctgccgggccc-gggccggtcgctgtctggaaattggagcccatc +caaggtcaatcaatgataatcctaatgttctacatcggtgcttcttacgaccggtcgggagggacgtccagc +gctggtattccgccccaacccgtggycccgcggctaactgccgccggtccgcgctgcgtggcctcccccctg +tcgaccgcacctactgttttgatggattttcccgttgtgctttcgctgcagagactggtgtggccctctatt +ctctgcatgatctctggccggctgatgtcgcggaggctatggcccgacatgggatgacacgtttatatgccg +cactacacctc-cccccagaggtactgctaccaccaggcacttatcacacaacctcgtatcttctaatccac +gacggtgatcgcgctgttgtaacttatgagggtgatactagtgcgggctataaccatgatgtttctatactc +cgcgcgtggatccgcacgaccaaaatagttggtgaccacccgttggttatagaacgagtgcgggccattggc +tgtcactttgtgctgctgctcaccgcagcccctgagccgtcacctatgccatacgtcccgtaccctcggtca +acagaggtgtacgttcgttctatatttggccctggt---------ggctctccgtctctgttcccatcagct +t----------gctccaccaaatcca-catttcatgccgtcccggttcatatctgggaccggctcatgctct +ttggcgccaccctggatgaccaggcgttttgttgctcacggcttatgacatatctccgtgggattagctata +aggttactgttggcgcccttgttgctaatgaggggtggaatgcctctgaagatgccctcactgctgttatca +ctgcagcgtacttgaccatctgtcaccagcgttacctccgcacacaagctatatctaagggtatgcgccggc +tggaggttgaacacgctcagaagttcatcacaagactttatagctggctatttgaaaaatc---------tg +gccgtgattacatccccggccgtcaacttcaattttatgcacagtgccgccgttggttatctgcgggtttcc +atcttgacccgcgggtgctcgtttttgatgagtcagtgccctgt---cgctgtaggacgttccttaagaa-- +----agtcgcgggcaaattctgctgctttatgaagtggttggggcagga------atgtacctgcttcttgg +----------------agccggctgagggtctggttggtgatcatggc--------catgataatgaagcct +atgagggctcagaggttgatcaggctgagcccgcacaccttgatgtttcggggacatacgctgttcatgggc +gccagcttgaggccctgtayagggcacttaatatcccccatgacatcgccgctcgagcgtctcgcytaacgg +ccaccgttgagcttgycgcaggtccagaccgtttggagtgccgtactgtattagggaacaagacttttagga +caacggtggtcgacggcgcccatctcgaagcaaatggccc------------------------cgagcagt +acgttctttcatttgacgcctcccgccagtccatgggggccgggtcgcatagtctcacctacgagctaactc +ctgctggcttgctggtgaagatctcgtcc-------aacggtctagactgcaccgcgacgttcccc---cca +ggcggtgctcccagtgccgtaccaggtgaggtagctgccttttgcagcgccctttataggtataataggttt +acccagaggcactcgctgacaggcggcctgtggttgcatcccgaggggctattgggtattttcccccctttc +tcacccgggcatctttgggagtccgctaaccctttctgcggggagggtactttatatacccggacttggtct +acatcaggtttctctagtgacttctccccccccgaggcagctgcccctgcgccggttgctgccct----ggg +gccgcccc---accctacaccccctgctagtgacat-----------------ctgggtgct---------- +---------gccaccgctc----tccgaagagc--------------atcagattgatgcagtgcctgttcc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcctgctcagccgcctagc +cctgttaagcctaga-------------------------------------ggtcccgtgcgtaagccgcc +gacaccgcc--------------------------------------accgtctcgtacccgccgcc----- +-------------------tcctttacacttacccagacggcgccaaggtgtatgcagggtcactgtttgag +tctagctgtgactggctggtcaatgcatcaaatcccggccatcgccctgggggtgggctgtgccatgctttc +taccaacgctaccccgagtcgt------tccatccgactgagtttattatgcgtgacgg---tctcgccgca +tacaccttgaccccccgccctattattcatgcggtggctcccgactatagggttgagcagaayccaaagaga +cttgaggcggcatatcgggagacctgttcccgccgcggtaccgctgcttacccactcttaggctcaggtatt +taccaggtccctgtcagcctaagtttcgatgcttgggagcgtaaccaccgccctggggacgagctttatttg +actgaccccgccgctgcc-------------------------------------------------tggtt +tgaggctaayaaaccaacaca--------------------------------------------------- +------------------------------------------gccggcccttactataaccgaggacacagc +cc------------gcacggccaacttggcactggagatcg------------atgccgccacggaagttgg +ccgtgcttgc---gctggctgcacagttagtcctggggttgtacactaccaatttaccgctggcgtccctgg +ttcgggaaagtctaggtcyatacagcaaggggatgttgatgtggttgttgttcccacccgggagcttcgcaa +tagctggcgtcgccggggctttgcggcctttacaccccatacggcggcccgtgttactctgggccgccgtgt +tgtcattgatgaggccccgtccctcccgccacacttgctgctgcttcatatgcagcgggcctcgtcggtcca +ccttcttggcgacccgaaccagatycctgctatagactttgagcatgccggcctggtccccgcaatacgccc +tgagcttgcgcccaccagctggtggcatgtcacacaccgttgccccgctgatgtgtgtgagctcatacgcgg +agcctatccgaagatccagaccacgagccgtgtgctgcggtccctattttggaatgaa------cccgccac +cgggcaaaaattagtcttcacgcaggccgccaaggctgctaaccctggtgcgatcacagtccacgaggccca +gggagccacattcacagagaccacaattatagctacagctgacgccaggggccttatccagtcgtctagggc +ccacgccatagtcgcactcacccgccacacagagaagtgcgttatattggatgcccccggcctgttacgcga +agttggcatatctgacataattgttaataacttc------------------------------ttycttgc +cggtg--gggaggtgggccaccatcgcccctctgtgatacctcgtggcagccctggtcagaaccttgagac- +-----attgcaggccttcccgccttcttgccagattagcgcttatcatcaaytagctgaggaattgggccac +cgaccggctcctgtcgctgctgttttgcccccttgccctgagcttgagcagggtctgctgtacatgccgcag +gagcttacagtgtccgatagcgtgttggtcttcgaactcacggatatagtccattgccgcatggccgcccct +agccagcggaaggctgtcctatcgacactcgtggggaggtatggtcgtagaactaagctgtatgaggccgcg +cactctgatgttcgtgagtccttagccaggttcatccccactatcggacctgttcaggccaccacatgtgag +ctgtatgagttggtcgaggccatggtagagaagggccaagatggctccgccgtgttggagctcgacctctgc +aaccgcgatgtctcgcgtattacattcttccaaaaagactgtaataagtttaccaccggcgagacsattgct +cacggcaaggtcggacagggtatttcagcttggagtaagaccttctgcgccctgtttggcccttggttccgc +gccattgagaaagaaatactggccctactcccgcctaacatcttctatggcgacgcctacgaggagtctgtg +ttcgctgcagcygtgtctggggcggggtcatgcatg---gtatttgagaatgatttctcggagttygacagc +actcagaataacttctccct------------------cggccttgagtgtgtagtcatggaggaatgtggc +atgcctcagtggctaatccggctgtatcatctggttaggtccgcctggatcctacaggcgccgaaggagtcc +cttaaaggcttttggaagaagcactctggtgagcccggcaccttgctttggaacaccatctggaatatggcg +atcatagcacactgctatgaatttcgcgatttcagagtcgctgccttcaagggcgacgactcagtggtcctt +tgcagcgactatcgccagagccgcaacgctgcggccctgattgcaggctgcgggcttaaattaaaggttgat +taccgtcctatcgggttgtatgctggcgtggtggtagcccccggtttggggacactgcccgatgtagtgcgc +tttgctggccggctgtctgagaagaattggggycctggcccggagcgggccgagcagctgcgccttgcggtt +tgtgattttcttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtatcccgtg-------ttta +cggagttagccctgggctggtacataacctcattggtatgttgcagaccattgctgatggcaaggcccactt +cacagagactgtcaaacctgtactcgaccttacaaactccataatacaacggatagaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gttgttgttcctcgtgtttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagtcgaytggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcrgtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgccgatgtcgyttcacaacccggggctggagctcgccctc +ggcagccgccccg---------------ccccctcggctccacttggcgtgaccagtccca----------- +------gcgcccctccgctgcctcccgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgctgtatcaccggcccccgacacagcccctgtgcctgacgtcgattctcgcggcgccatattgcgacgaca +gtataatctatctacatccccgctcacgtcatccattgcttcgggtactaatttggttctttatgctgcccc +gctgaaccctcttctaccccttcaggacggcaccaatacacatattatggctactgaggcatctaactatgc +ccagtaccgggttgttcgggccacgatccgttatcgccctttggtgcctaacgccgtcggcggctatgcaat +ttctatttcgttttggcctcaaaccaccaccacccccacatctgtggatatgaattctattacctctaccga +tgttaggattctggttcagcccggcattgcttccgagttggtcattcctagtgagcgtctccattaccgtaa +tcagggctggcgctctgttgaaacatcgggcgtggccgaggaggaggctacctctggtttggtgatgctttg +cattcatggctcccctgttaactcctatactaacaccccttacaccggtgcgcttgggctccttgaytttgc +gctagaacttgagtttaggaatttgacacccggaaataccaatacccgtgtatctcggtacacaagtacagc +ccgccaccggctgcgccgcggtgccgacggcaccgctgagcttactactacggcagccacgcgcttcatgaa +ggacctgcatttca---ccggtacgaac---ggggttggtgaggtgggccgtgggattgctttgacactgtt +caatcttgctgatacacttctcggtggtctgccgacagaattaatttcgtcggccgggggtcaactgttcta +ctcccgccctgtcgtctcagccaatggcgagccgactgttaagttatatacatctgttgagaatgcacagca +ggataaggggatagctatcccacatgacatagatttgggtgactctcgtgtgatgatccaggattatgacaa +tcagcacgagcaggaccggcccaccccttcgcccgccccgtctcgtcctttttcggtcctccgcgccaatga +tgttttgtggctttc-----------------------------ccttaccgctgctgagtatgac------ +cagactacatatggttcgtccaccaacccgatgtatgtctcagacactgtaacatttgt---caatgtggca +acaggggctcaggctgtcgcccgttctcttgactggtctagagttaccctggacggccgccctcttactacc +at-----tcagcagtactctaagacattttatgtcc-tcccacttcgcgggaagttatctttttgggaggct +ggcacaaccaaa--gccggttacccttataattataacacaaccgctagtgaccagattctgattgaaaacg +cagctggccat------cgtgtcgctat-atctacctatactactagcctggg--------------cgccg +gccctgtgtcagtctc-tgcggttggtgtgctagccccacattcggcccttgctattcttgaagacactgtt +gact---------atccagcccgtg----ctcacacttttgatgatttctgtccggaatgccgtgccc---t +gggtctgcaggggtgtgcttttcaatc--------tactatcgctgagctccagcgtct------------- +--------taagatgaaggtaggcaaaacccgggagttttaattaa-tt--------ctt-ctt------gt +gccc-cct--------tc-aggt-tcct-------------------------------------------- +------------------------------------cgctccccg---------------------gaaaaa +aaaaaaa---------------aaa----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444121.1/17095/1-7095 |Hepeviridae isolate HEPAC45, partial genome +----------------------------------------------------------------tcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaactctgccttggcgaatgctgtggtggttcggccgtttttatctcgtgtgcagactgagattct +yattaatttgatgcaaccccgacagctggttttycgtcctgaggtgctctggaatcaccccattcaacgtgt +tatacacaatgaattagagcagta---ctgccgggccc-gggccggccgttgcttggaaatcggggcccatc +caaggtcaattaatgataacccaaatgttttgcaccggtgttttctgcgaccagtcgggagggatgtccaac +gttggtactccgcccccacccgcggtcctgcggccaactgccgtcgatccgcgttacgtggcctcccccctg +tcgaccgcacctattgttttgatgggttttcccgctgtgcttttgctgcagagactggtgtggccctttatt +ctctgcatgacctctggccagccgatgtcgcagaggccatggcccgacacgggatgactcgcttgtatgcag +cgctacatctc-cctcccgaggtactactgccacccggtacttatcatactacttcgtacctcctgattcac +gacggtgatcgtgctgttgtgacttatgagggtgacactagtgcaggttacaaccatgatgtttccatactc +cgtgcatggattcgcacgactaagattgtaggtgaccatccgctggtgatagagcgtgtgcgggccatcggc +tgtcatttcgtgctgttgcttactgcggcccctgagccgtcacctatgccatatgtcccataccctcggtca +acagaggtgtatgttcgctccatattcggccctggt---------gggtccccgtccttgtttccatcagct +t----------gctctaccaaatcta-cattccatgccgtcccggtccatatctgggaccggctcatgcttt +tcggcgctaccctggatgatcaggcattttgttgctcgcggcttatgacttatctccgtgggattagttaca +aggttactgtcggtgcccttgtcgccaatgagggttggaatgcctcggaggacgcccttaccgctgttatca +ctgcagcgtatctaaccatttgtcaycagcgttacctccgcacccaagcgatatctaagggcatgcgtcggt +tggaggttgagcacgctcagaagtttatcacaagactttacagytggctatttgagaaatc---------cg +gtcgtgactatatccccggccgccaactccagttttatgcacagtgtcgccgctggttatcggcaggtttcc +atcttgaccccagggtgcttgtytttgatgagtcwgtgccttgc---cgytgcaggacgtttttaaagag-- +----ggtagcaggtaagttctgctgttttatgaaatggttagggcagga------gtgcacctgtttcttgg +----------------agccagcggaaggcctggtcggtgatcaaggc--------cacgacaatgaagctt +atgagggctcggaggttgaccaggcagagcccgctcattttgacgtctcagggacctacgccgttcatggac +gccagctcgaggctctgtatagggcactyaatatcccacatgacattgctgcccgggcgtcccgcctaacgg +ctaccgtcgagcttgttgcaaacccagatcgcttagagtgccgtactatactagggaataagaccttcagga +caacggtggtcgatggcgcccatctcgaggcgaatggccc------------------------cgagcagt +atgtcctytcatttgatgcctcctgccagtctatgggggctggtccgcacagtcttacttatgaactgaccc +ccgctggcctgcaagtgaagatctcgtct-------aatggcctagactgcaccgcgactttcccc---ccg +ggcggcgctcccagtgccgcaccgggtgaggttgcggccttctgtagcgctctttataggtataatcggttc +actcagcrgcactcgctgacaggtggtctatggctgcatcctgaggggttgttaggtattttcccccctttt +tcccctggacacatttgggagtctgctaatcctttttgtggggaagggactttgtacacccggacttggtct +acatcaggtttttcyagcgacttttccccgcccgaggcgactgctcttgtgtcagcccctgcccc----ggg +agtgcccc---gccccacaccccctgttagtgatat-----------------cygggtgcy---------- +---------accacctgac----tctgagra-----------------ccgggctgacgcggcgcctgaccc +ytytg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttatcgagcatgctcaaccgtccarc +cctskyaagtytagg-------------------------------------gcccctgtgcatargccacc +cacaccmcy--------------------------------------gccccstcgtactcgccgcc----- +-------------------tcctttatacctatccwgackscgctaaggtgtatgyagggtcattgtttgaa +tcggactgtgactggctggtcaacgcatcgaaccccggtcaccgccctggaggcgggctctgccatgctttt +yaccaacgttaccctgagtcat------tcyacysgaccgaatttgttatgcgtgacgg---cctcgctgcg +tatactcttaccccccgtcctatyatccatgcagtggcccccgattatagggtcgagcagaatcctaagagg +cttgaggcggcgtatcgagagacctgctcccgccgcggtaccgctgcttrcccactcttaggctcgggcata +taccaggtcccagttggtctcagctttgacgcctgggaacgtaaccaccgccctggggatgagctttacctt +actgaccycgctgctgcc-------------------------------------------------tggtt +ygaggccaataaacctacgca--------------------------------------------------- +------------------------------------------gccggccctcacaataactgaggatrcagc +cc------------gaacggccaatctagcactggaactag------------acgcagccaccgaggttgg +tcgcgcttgc---gccggctgcacagtcagtcctgggattgtgcattaccagttcactgcyggcgtcccggg +ctcggggaagtcccggtccatacaacagggggatgtygatgtggtggttgttccyacccgggagctccgcaa +trgttggcgccgccggggtttcgcggccttcacaccacacacggcggctcgygtcaccttgggccgccgtgt +cgtcattgatgaggccccctccctcccaccacacctactgttgttacatatgcarcgggcttcgtcggttca +ycttctcggcgacccaaatcagatccctgccatagatttcgagcatgctggcctggtccccgcaatacgccc +cgagcttgcgcccactagctggtggcatgttacacatcgctgccctgctgatgtgtgcgaacttatacgggg +agcttayccaaagattcaaaccacgagccgtgtacttcggtccctattytggracgag------cctgcyac +tggccagaaactggttttcacacaggccgctaaagctrccaaccctggtgcgattacagttcaygaggccca +gggtgccacctttacggagaccactatcatagccacggctgatgccaggggcttaattcaatcctcaagggc +ccacgctatagtagcacttacccgccacacagagaagtgcgtyatactggatgcccccggcttactgcgtga +agttggtatatctgayataattgttaacaatttc------------------------------ttccttgc +cggtg--gtgaggtgggccaccaccgtccctctgtaatacctcgtggtaaccccgrccagaatgttgcgac- +-----tttaccggcgtttccaccctcctgccaaattagtgcttaccaccagctggctgaggaattaggccac +cgaccagcccctgtcgccgcggtsttgcccccctgccccgarctwgagcagggtctgctgtwtatgccgcag +gagcttacagtgtctgacagtgtcttagtttttgagctcacggacatagtccattgccgyatggctgccccc +agccagcggaaggccgtcctatcgacgcttgtggggaggtacggtcgtaggacgaagctgtatgaggccgcc +cactccraygtccgcgagtccttagctaggttcattcccaccattgggcccgttcaggccaccacatgtgaa +ctttatgagytggtcgaggctatggtggagaraggtcaagacggttccgccgttctagagctcgacctttgc +aaccgtgatgtctcgcgtatyacrtttttccagaaagattgtaacaagttcaccaccggcgagaccattgct +cacggtaaagtcggtcagggcatttcagcttggagtaagactttttgcgccctgttcggcccgtggttccgt +gctatygagaaggagatattggctytgctaccgccyaatattttctatggtgaygcctatgaggagtctgtg +ttcgctgccgctgtatctggggcggggtcatgcatg---gtattcgagaatgacttctcagagtttgatagt +actcagaataacttctctct------------------tggccttgagtgtgtgattatggaggagtgtggc +atgccccastggctaatccggctatatcatctggttcggtcggcctggatcttacaggcaccgaaggagtcc +cttaaaggattytggaagaagcactctggagagcccggcacccttctttggaacaccatttggaayatggcg +attatagcacactgctatgagtttcgcgactttrgggttgctgcttttaagggtgatgactcagtggtyctc +tgtagtgattatcgccagagccgcaatgcggcagttctgattgctggctgcgggcttaaactgaaggttgac +taccgccctatcgggctgtatgccggtgtggtggtggctcctggcctggggacgctacccgatgtrgtgcgt +ttcgctggccggctttccgagaagaactggggccctggcccggagcgggccgaacagttgcgccttgcagtt +tgtgatttccttcgtgggctgacgaatgttgcgcaagtttgtgttgatgttgtgtcccgts-------ttta +cggggttagcccygggttggtacataaccttatcggcatgctgcagactattgctgatggcaaggcccattt +tacagagactgtcaaacctgtgcttgaccttacgaattccatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgcgcccyagggctgttct +gttgttgttcttcgtgtttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagycggctggtc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcatttcacaacccggggctggagctcgccctc +gacagccgccccg---------------cccccttggttccacctggcgtgrccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgayctgcccca---------gctggggctgcgccgttgac +cgctgtgtcgccggcccccgacacggcccccgtgcctgacgtrgattcycgcggygctataytgcggcggca +gtacaacctgtctacgtctccactaacttcatctgttgcctcaggcactaatctggttctttatgctgcccc +gctaaaccccctcctgccccttcaggayggcaccaacacacatattatggccactgaggcgtcyaattatgc +ccagtaycgggtcgtccgagccacgatccgttaccgyccgttggtgccgaacgccgttggcggttatgcaat +ttccatttcattttggcctcagactacyaccacccccacgtctgtggacatgaaytctatcacctccactga +cgttaggatcctggtccagcctgggattgcctctgaattggtcatccctagcgarcgtctccactaycgtaa +tcarggttggcgytctgttgaaacatcaggtgtggctgaagaggaggctacatccggcttagtgatgctctg +yattcatggctcccccgttaattcctatacwaataccccttacactggggctttggggcttctygattttgc +attagaactygagtttaggaacctgacacctgggaacactaacacccgtgtgtcccgctatacgagcacagc +ccgccaycggctccgccgtggagccgacggtactgccgagcttaccaccacggcagccacgcgttttatgaa +ggacctacacttca---ccggcacgaac---ggggttggtgaggtgggccgtggyattgctcttacgttgtt +caatcttgctgatacgcttcttggtggcttgccgacagaattaatttcgtcggctgggggtcagttatttta +ctcccgccctgtcgtctcagccaatggcgagccggctgttaagttgtatacatctgttgagaatgcgcagca +ggacaaaggaattgcyatcccacatgayatagatytgggtgactcgcgtgtggttatccaggattaygataa +tcaacatgagcargaccggcctaccccttcgcccgccccgtctcgtccgttttcggtccttcgtgctaatga +tgttctgtggctctc-----------------------------tcttaccgctgctgagtatgat------ +cagactacatatggatcttccaccaacccgatgtatgtctcagacaccgtcacatttgt---caatgtggct +acaggagctcaggctgttgctcgctctcttgactggtccaaggtcactctggacggccgccccctyactacc +at-----ccagcagtactcyaaaacattytacgttc-ttccgctccgcggaaagttatctttctgggaggct +ggcacgactaag--gccggttacccttataattacaacacaactgctagtgaccaaatactgattgaaaatg +cagctgggcay------cgtgttgctat-ttctacctataccactagcctggg--------------tgccg +gacctgtgtcagtctc-tgcggttggtgtgttagcaccgcattcggccctcgctatgcttgaagatactgta +gact---------acccsgcccgcg----ctcatactyttgatgatttctgcccggaatgccgtactc---t +tggcctgcagggctgtgctttccaatc--------tactattgctgaactccag------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444122.1/17205/1-7205 |Hepeviridae isolate HEPAC173, complete genome +---------------------tactatctctctatg--------------------------ggtcgacgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +cgcggctaattctgccttggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagctggttttccgacctgaggtgctttggaatcatcccattcaacgggt +tatccataatgaattagaacagta---ctgtcgggccc-gggctggtcgctgcttagaggttggggcccacc +caagatccatcaatgacaacccgaatgttctgcatcgctgcttcctacgaccagttggtagagatgttcagc +gctggtattctgcccctacccgtggccctgcggccaactgtcgccgctccgctttgcgtggccttccccctg +ttgaccgcacatattgttttgatggattctcccgttgctcgtttgctgcggagactggtgttgccctttatt +cattgcatgacctctggccggccgatgttgcagaggccatggcccgacacgggatgacacgcttatatgctg +cactacatctt-ccccctgaagtactactaccacctggtacttaccacacaacatcataccttcttattcac +gatggcgaccgtgccgttgtgacttatgagggtgacactagtgcaggttacaatcatgatgtttctatactc +cgcgcatggatccgcacaactaagatagtcggcgaccatccgctggtgatagagcgtgtgcgggctatcggc +tgtcactttgtgctgctgctcactgcggcccctgaaccgtcaccaatgccttatgttccatacccccggtcg +acagaggtgtacgttcgctccatattcggccctggt---------gggtccccgtccctgtttccatcagct +t----------gctctacaaaatcta-cattccatgccgtcccagttcatatctgggaccggctcatgctct +ttggtgccactctggacgaccaggcgttttgctgctcacggcttatgacctaccttcgtgggattagttaca +aggtcactgtaggtgccctcgttgctaatgaagggtggaatgcttcggaggacgcccttaccgctgtcatca +ccgcagcgtacttgaccatctgtcatcagcgttacctccgcactcaagctatatccaaaggcatgcgtcggc +tggaggtcgagcatgctcaaaaatttatcacaagactctatagttggttgtttgagaagtc---------tg +gccgtgattacatccccggccgccagctccagttttatgcacagtgccgccgttggttatcggcgggtttcc +acctcgacccaagggtgcttgtatttgatgagtctgcgccctgt---cgctgtaggacgtttcttaagaa-- +----ggttgcaggtaagttctgctgttttatgaagtggctggggcagga------gtgcacctgcttcctgg +----------------aaccagctgagggtctggttggtgaccaaggc--------cacgataatgaagcct +atgagggttccgaggtcgaccaggccgagcccgcccatcttgatgtttctgggacttatgccgtccacggga +gccaactcgaggccctctacagggcgcttaacatcccgcacgacatcgctgctcgagcctcccgtttaaccg +ccactgttgaacttactgcaggtccagaccgtttggagtgtcgcactgtgctcgggaataagaccttccgga +caacggtagttgacggcgcccatcttgaggtgaatggccc------------------------tgagcagt +atgtcctttcgtttgacgcctcttgccagtctatgggggccgggccgcataacctcacctatgagctcactc +ctgctggtatgcaggttaagatttcatct-------aatggccttgattgtactgcaacatttccc---ccg +ggcggagcccctagtgcagatccgggggaggtagcagctttttgcagtgccctctataggtacaacaggttc +acccagcgccactcgcttacaggcggtttgtggctgcatcctgaggggctattgggcatcttccctcccttc +tcccccgggcacctttgggagtccgctaaccctttttgtggggagggaactttgtatacccggacttggtca +acatctggtttttctagtgatttttccccccctgaggcggctgccgctgcgccagccgcagccac----agg +gctgccgc---actctacaccccctgttagtgacat-----------------tcgggtgtt---------- +---------gccaccaccc----tctgaggagt--------------ctcaggttgatgcagcgcctgcccc +tccag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tccctaagcctgcacaaccgtccggc +cctgctaggctgaag-------------------------------------gcccccgtgcgtaagccacc +aacaccgcc--------------------------------------accccagcgtacccgccgcc----- +-------------------tcctctacacttacccggatggggcgaaggtgtatgcggggtcactgtttgag +tcagactgcgattggctggtcaatgcgtcgaatcccggccatcgtcccggaggtggcctatgtcatgctttt +taccaacgctaccccgagtctt------tccacccaactgagttcattatgcgtgacgg---tcttgccgca +tataccctaaccccccggcctattatccacgcggtggcccccgattatagggttgagcagaacccaaagagg +cttgaggcagcataccgagagacctgctctcgccgtggcactgctgcttacccactcctcggctcaggcata +taccaagttcccgttagcctgagctttgacgcctgggaacgcaaccaccgccccggggatgagctctacttg +actgacctcgccgccacc-------------------------------------------------tggtt +tgaggccaataagccagcaca--------------------------------------------------- +------------------------------------------accggcccttacaataactgaagatactgc +cc------------gcacagccaacctagcactagagatcg------------acgctgctacggaggtcgg +ccgggcttgt---gccggctgtacagttagccctggggttgtgcattatcaatttactgccggggtcccagg +ttcggggaagtcgcggtccatacagcaaggggaygttgatgtggtggttgttcccacccgtgagcttcggaa +tagctggcgccgccggggtttcgcagctttcacgcctcacacggcggcccgtgttaccacgggccgtcgtgt +cgtgattgatgaggccccatcccttccgccgcacctgctgcttttacacatgcagcgggcctcgtcggtcca +ccttctcggcgacccaaatcagatccctgctatagactttgagcatgccggcctggtccccgcaatacgccc +cgagcttgcacccaccagctggtggcatgtcactcaccgctgccccgctgatgtgtgcgagcttatacgcgg +ggcataccccaaaatccagactactagccgcgtgctgcggtctttattctggaatgag------cccgctat +cggccagaagttagtcttcacacaggccgctaaggctgctaaccccggtgcaattacagtccatgaggccca +gggcgccactttcacggagaccacaattatagccacggccgatgccagggggcttattcaatcctcccgagc +tcacgctatagtcgcacttacccgccacacagagaagtgcgttatccttgatgcccccggtttgttacgtga +ggttggtatatctgacataattgtcaataatttc------------------------------ttccttgc +cggtg--gggaagtgggccaccaccgcccctctgtgataccccgtggcagtcctgaccagaaccttgcaac- +-----actacaggcttttccaccctcctgccagatcagtgcttatcatcagttagctgaggagctgggtcac +cgcccagcccccgtcgctgccgtcctgcccccctgccctgaacttgagcagggcttgctatatatgccacaa +gagctcacagtgtccgacagcgtgctggtttttgaactcacggacatagttcattgccggatggctgcccct +agccagcggaaggccgtcctatcgacgcttgtgggtaggtatggccgccggacgaagctttatgaggctgct +cactcagatgtccgtgagtccctgacaagattcatccctaccatcgggcccgttcaggcaactacgtgtgag +ctatatgaactggttgaggccatggtggacaagggtcaggacggctctgccgtgcttgagcttgatctttgc +aatcgcgatgtatcgcgtattacattcttccagaaagactgtaacaagtttaccacaggggagaccattgcc +cacggtaaggtcggtcagggcatttcggcttggagcaagaccttctgtgccctctttggcccgtggtttcgt +gctattgaaaaagaaatactggccctgctcccgcccaatatcttctatggcgatgcatatgaagagtctgtg +tttgccgccgctgtgtctggggcaggttcatgcatg---gtgtttgagaatgatttttcagagtttgatagt +actcaaaataatttctccct------------------tggcctcgagtgtgtggtcatggaggaatgcggc +atgccccagtggctaatccggttgtaccatttggttcggtcagcctggatcctacaggcgccgaaggagtct +cttaaagggttttggaagaagcattctggtgagcccggcaccctcctctggaacaccgtttggaatatggcg +atcatagcacactgctatgagtttcgtgatcttagggttgccgccttcaagggagatgactcggtggtcctc +tgtagcgactatcgtcaaagccgcaacgcagcggccctaattgcaggttgcgggctcaaactgaaggttgat +tatcgccctatcgggttgtatgccggtgtggtggtggcccccggcctggggacactacccgatgtagtgcgt +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggccgagcagctgcgccttgctgtt +tgtgattttcttcgagggctgacgaatgttgcgcaggtatgtgttgatgttgtatcccgag-------ttta +cggagttagccctgggctggtacataaccttattggcatgttgcaaaccattgccgatggtaaggcccactt +tacagagactgttaaacctgtgcttgatctcacgaactctatcatacagcgggtggaatgaataacatgtt- +t----------------tatgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcctcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgtcgccgatgtcatttcgcaacccggggctggagctcgccctc +gacaaccaccccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccacgtcgtcgacctgcccca---------gctggggctgcgccgttgac +cgctatatcacctgctcctgatacggcccccgtgcctgatgttgactctcgtggcgctatattgcggcgcca +gtacaatttatccacatccccactcacatcatctgttgcttcgggtactaatttggttctttatgctgcccc +gttaaatcctttgttacctcttcaggatggcactaacactcacatcatggctactgaggcgtccaactatgc +ccagtaccgggttgtccgagctacgattcgttacaggccgttggtgccgaatgctgtcggcggctatgcaat +ctctatttcattttggcctcagaccactaccacccctacgtctgttgacatgaattctattacctccactga +tgttaggatcctagttcagcccggtgtcgcttccgagttagttattcctagtgaacgcctccactaccgtaa +ccaaggttggcgctctgtggagacctctggcgtggctgaggaggaggccacttctggtctggtgatgctctg +tatccatggttcccccgttaattcctacaccaacaccccctataccggggcgctcgggctccttgactttgc +tctagaacttgagtttaggaacttgacacctgggaacaccaatacccgtgtttcccggtatacaagcactgc +ccgtcatcggctgcgccgcggcgccgatggcaccgctgagcttaccaccacagcggctacacgtttcatgaa +ggacctgcacttca---ccggtacgaat---ggggtcggtgaggtgggtcgtggtattgctcttacactctt +taatcttgctgacacgctcctcggcggtctaccgacagaattaatttcgtcggccgggggacagttgttcta +ctcccgccccgtcgtctcagccaatggcgagccggctgttaagttatatacatctgtggagaatgcacagca +ggataaagggattgccattccacatgacatagacttaggtgactctcgtgtggttattcaagattatgataa +tcagcatgagcaggatcggcccaccccttcgcccgccccgtctcgccctttctcggtccttcgkgctaatga +tgttctatggctttc-----------------------------tctcaccgccgctgagtatgac------ +caaactamatatgggtcgtccaccaacccaatgtatgtctcaratactgttacatttgt---taatgtggct +acaggagcccaggctgttgcccgttctcttgactggtctaaagttactctagatggctgcccccttactacc +at-----ccagcagtactctaaaacattctacgttc-tcccgctccgcggraagctatccttttgggaggct +gggacaaccaaa--gctggttatccctataactataacacgactgctagtgaccagattttaattgaaaatg +cagccggtcac------cgtgttgctat-ctctacttatactaccagccttgg--------------wgccg +gccctgtgwcagtttc-tgcagtcggtgtgttagccccacattcggctctcgcagttcttgaggataccact +gact---------accctgcccgcg----cccacacttttgatgatttctgtccggagtgtcgcgccc---t +tggtttgcaggggtgtgccttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggyaaaacccgggaagtttaattaa-tt----t--cctt---t------gt +gccc-cct--------tc-atag-tttct----gc-tt---t-----------------att-t-------t +tcttttct----g----------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444126.1/17206/1-7206 |Hepeviridae isolate HEPAC7, partial genome +---------------------------------aga-ctgttg-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatcccgtgttcaaactgatatcct +tattaacctgatgcaacctcgacagcttgtattccggcctgaagtcctctggaaccatccgatccagcgagt +catacataatgagttggagcaata---ctgccgtgccc-gcgctggtcgctgtcttgaggtgggcgctcacc +caagatctattaatgacaaccctaatgttctgcaccggtgcttcctccgcccggttgggagggacgtccagc +gctggtattctgctcccactcgtggtccagcggctaactgtcgccgttctgcgctacgtggtctgcctcccg +tcgatcgcacatattgcttcgacgggttctcccgctgcgcctttgccgctgagaccgggatcgctttatatt +cactgcatgacctttggccttcggatgtcgccgaggctatggctcgccacgggatgacgcgcttgtatgctg +ccctccacctc-ccccccgaggttctgttaccacctggcacttaccacacaacctcctatcttctgattcac +gacggcaaccgtgccgtcgtgacttacgagggggataccagtgcgggttataatcacgatgtgtctatactt +cgtgcttggattcgcactactaagatagtcggcgatcacccgctggtaatagagagggttcgcgctatcggc +tgccattttgttttactccttactgcagcccccgagccatccccaatgccttatgtcccgtaccctcgttca +acagaggtgtatgtcaggtccatatttggccccggc---------gggtcgccttctcttttcccatcagct +t----------gctctaccaagtcta-cattccatgccgtcccggttcatatctgggaccggcttatgcttt +ttggtgccaccttagatgatcaggccttttgctgctcgcggcttatgacctatctccgcgggattagctata +aagtgaccgtcggcgcacttgtcgccaacgagggctggaatgcctcggaggatgcactaactgctgtgatta +ctgcagcgtacttgaccatctgtcatcagcgctacttacgaacccaggccatctctaaaggcatgcgtcggc +tagaggttgagcatgctcaaaagtttatcacaagactatatagctggctgtttgaaaaatc---------ag +gccgtgactatatccccggtcgccagctccagttttatgcgcagtgccgccgttggctctcggctggcttcc +atctggaccctagagttcttgtctttgacgaggcggtcccctgc---cgctgccggagcttcttgaagaa-- +----ggtcgccaggaaattctgttgttttatgaaatggttggggcagga------gtgcacctgttttctgg +----------------aaccagcggagggcctggttggtgactgtggc--------catgataacgaggcct +atgaggggtctgaggtggaccccgctgagcctgctcaccttgatgtctccgggacttatgcagtccacggcc +gtcagcttgaggccctttatagggcgcttaatattccagatgacatcgcggcccgtgcgtcacgcttgacgg +ctactgtggaacttgccgccagtccaggcagactcgagtgccgtacggtgcttgggaacaaaattttccgta +catcgataactgatggtgcccatctcgaggccaatggccc------------------------cgagcagt +acgtcttgacatttgatgattcttgccaggcgatgggggctgggcctcacaacctcacgtatgaacttgtcc +ctgctggtctgcaggttaagatatcttct-------aatggcctggattgtaccgctatattcccc---cct +ggtggagcgccaagcgctgcaccgggtgaagtggcggctttctgtagcgccctatacaggtacaataggttc +acccagcgccattcgttgaccggtgggctgtggctacaccctgaggggctcctcggcctgttcccccctttt +tccccggggcatctttgggagtctgcaaaccccttttgcggtgagagcacactttatacacgaacttggtct +acatctggtttttctagcgacttctccccacccgaggcgacctatgccgccccagtccctaacac----ggg +gctaccctcaggcgccccctcctccgctagtgatat-----------------ccgggtgtt---------- +---------tccatcgccc----tctgaggggt--------------tggcgactgttccgccacccgtaac +cccggttagtaagccagctaa---------------------------------------tttgtc------ +------------------------------------------------------------------------ +-cagtcttac-------------------------------------------------------------- +-------------cacatct----aggctccccgcctgtgagccacccacaccaccaccggccctagccccg +g---------------------------------------------ttagtaatcaagctaacccgyctagc +cttactacacccagg-------------------------------------ccctctgcctgcgagccgcc +tacaccgcc--------------------------------------accggctcgcactcgccggc----- +-------------------tcctttatgtatatcccgatggggccaaggtgtatgctggctctytgtttgag +tcagattgtgattggctggtcaatgcatccaaccctggccaccgccctggtggtggcctctgccatgcattt +taccagcgcttccctgagtcgt------tctatycggctgattttgtcatgcgtgaagg---cctcgccgca +tacactttgaacccgcgtccgatcatccatgctgtagcccccgactacagggttgaacagaaccccaagagg +ctagaggcggcatatcgtgagacctgctcccgcctcggtacagctgcctacccgctactggggtcggggatt +taccaggtccctgtaggcttgagcttcgacgcctgggagcgtaatcaccgcccaggcgatgaactttacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacaccgc +tc------------gcacagccaaccttgcgctcgagattg------------attccgctactgaggtggg +ccgtgcttgt---gccggctgcactgttaaccctgggattgtccattaccaattcaccgccggggttcctgg +ctccgggaagtctaggtctatacagcagggggatgttgatgtcgtggttgtgccaactcgtgagcttcgtaa +cagttggcggcgccgcggcttcgctgcctttacaccccacacagcagctcgtgtcactgccggccggcgtgt +ggtgattgatgaggcaccttcactcccaccacacttgctgctgctccatatgcagcgagcctcatcggttca +tcttcttggtgaccccaatcagatccctgccattgattttgagcacgccggtctggtcccagcgatccgccc +tgaactagcccctactarttggtggcatgtcacccaccgctgccccgccgatgtgtgcgagctcatacgcgg +ggcctacccaaagattcagacgaccagccgtgtgttgagatctttattttggaatgag------cctgcggt +aggtcagaggctggttttyacgcaggcagctaaggcggctaatcccggcgcaatcaccgttcatgaggctca +gggcgccacatttactgagactaccattatagctacggccgatgctagaggccttatccaatcttcccgtgc +acatgccatcgttgcactcacccgccatacagaaaagtgcgtcattcttgacgctcctggcctactgcgcga +ggttggcatttctgatataattgttaataacttt------------------------------ttcttggc +tggtg--gtgaagtgggccaccatcgtccttctatcatacctcgcggtaacccagatcagaayttagacac- +-----cctccgagcgttccccccgtcttgccaratcagtgcttaccaccagttggctgaagagctgggtcac +cggccggccccagtggccgccgtcctgccccccygccctgagcttgagcaggggttactttayatgccgcag +gagcttacggtgtccgatagtgtcctaatttttgaacttacggacatagttcattgtcgtatggctgccccc +agtcaacgcaaggcggttctttctacgctcgtcggcaggtacggccgccgaacgaagctgtatgaagcggcc +cactctgatgttcgcgrgtctttagggargttcatccctaccattggaccggtccaggccaccacatgcgag +ctatatgagctggttgaggccatggtggagaagggccaggacggctccgccgtgcttgagcttgacctctgc +aaccgtgatgtctcgcgtatyacgtttttccagaaggattgtaataaatttacaacaggtgagaccatagct +cacggtaaggtgggccagggsatttcggcttggagtaaaaccttctgtgctttattcggcccgtggttccgc +gccattgaraaggggattctggccctgctcccacccaatgtcttctatggcgatgcytacgaksrgtcagtg +ttttctgcagccatctccgcggccggccccastatg---gtttttgagaatgacttttctgagtttgatagc +acccaaaataatttttctct------------------tggccttgaatgcgtyattatggaggagtgcggc +atgccccagtggcttatccgactgtaccatttagtyagatcagcctggattctgcaagccccgaaagagtct +ttgaaaggtttctggaagaagcattcyggygagccyggcastctcctttggaacaccgtctggaacatggca +atcatagcacactgctatgaattccgtgacttgagagtggcagcttttaagggggatgattcrgtggttctc +tgcagtgactaccgtcagagccgcaatgcagctaccctgatagycggttgtgggytgaaattgaaggttgac +taccggcctataggtttgtatgccggtgttgtagtggcccccggcctcggtgcacttcctgatgtcgtccgg +tttgcaggtcgattatctgagaagaactggggyccgagccctgagcgrgccgaacagttgcgcttagcagtt +tgtgatttcctccgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataatcttattggcatgctacagactattgctgatgggaaggcccactt +tactgagactgtcaagcctgtgctggatcttacaaattctatcatacagaggttggratgaataacatgtt- +t----------------tgtgcattgcccatggg------------accgccatgcgccctagggctgttct +gctgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccga------ccggccagccgtctggyc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatyacarcccgggactggagctcgccctc +gacagccggcccg---------------ccccctcggttcctcttggcgtgaccagtccca----------- +------gcgcccctccgctcccccccgtcgtcgatctacccca---------gytggggctgcgccgctaac +ygctgtttcaccagcgcctgatacggctccagtccctgatgttgactctcgcggcgctatcctgcgccgtca +gtacaatctgtccacttctcctttgacttcatctgttgcttctggaactaatcttgttctgtatgccgctcc +gcttaaccctctcctgccyctccaagatggcaccaacactcacattatggcgactgaggcgtctaaytacgc +tcagtaccgggytgtccgggctacaatccgttatcgccctttggtgccgaatgccgtcggtggttatgcaat +ytctatttctttttggccccagaccacaactacaccyacttctgttgacatgaattctattacctctacyga +tgttaggattttagtccagcctggcatagcctctgagctggtcatcccgagtgagcgcctccactatcgtaa +tcaaggttggcgctcygttgagacatcgggtgtggccgaggaggaggcgacatcaggcctagtyatgctttg +tattcatggttcycctgtyaattcctataccaacacgccctatactggggcattggggctcctcgactttgc +gcttgagcttgaattyagaaacttgacccctgggaacactaacacccgtgtgtcccgttacaccagtacagc +ccggcaccgcttgcgccgtggtgccgatgggacagctgagcttacaactactgcagccacacgttttatgaa +ggacytgcayttca---ccgggacgaat---ggtgttggygaggtgggccgtggyatagccctaacgctgtt +taatcttgctgatacacttctcggcgggytgccgacagaattgatttcgtcggctggaggacaattgttcta +ctcccgyccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcgcagca +ggacaagggtattgctwtaccacacgatatagatttaggggattcccgtgtggttatacaagactatgacaa +ccaacatgaacaagaccggcctaccccgtcaccggccccatcccgtcccttytcagtccttcgagctaatga +tgtcctgtggctctc-----------------------------cctgactgcggctgaatatgac------ +cagactacctatggcacctcgaccaatcctatgtatgtttcagatacagtcacatttgt---taatgtggcg +acaggtgcccaggccgttgcccgatcccttgaytggtccaaggtcactttggayggccggccgcttactact +at-----ccagcagtactctaagacattttatgttc-tgccactccgtggcaagctttccttttgggaagct +ggtacgactaag--gctggctatccttataattaygacactactgctagtgaccagattttgatcgagaacg +cagccggtcac------cgtgttgccat-atctacttataaagctagtcttgg--------------cgccg +gccctgtgtctgtttc-tgcggtcggcgttcttgcyccgcattctgctttagctgtgcttgaagatactatt +gact---------atcccgcccrtg----ctcatacttttgatgatttttgccctgagtgccgcaatc---t +cggcctgcagggctgtgctttccaatc--------tactattgctgagcttcagcgtct------------- +--------t--------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444127.1/17277/1-7277 |Hepeviridae isolate HEPAC98, complete genome +---------------------------------------------------------------gtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggtccggccgtttttatcccgtgttcaaactgaaatcct +tattaacctcatgcaacctcgacagcttgtgttccggcccgaagtcctctggaatcatccgatccagcgagt +tatacacaatgagctggagcaata---ctgccgagccc-gcgctggccgttgtcttgaagtgggcgcccatc +caagatctattaatgataatcccaatgttctgcaccggtgctttctccgcccggttggcagagacgtccagc +gctggtattccgcccccactcgtggcccagcggctaattgccgccgttctgcgctacgcggcttgccccctg +tcgaccgcacatattgcttcgacgggttctcccgctgcgcctttgccgctgagaccgggatcgctttatact +cattgcatgacctttggccttcggatgttgcggaggctatggctcgtcacgggatgacgcgtctgtatgctg +ccctccaccta-ccccctgaagttctattaccacctggaacttaccacacaacttcctatcttctgattcac +gacggcaatcgtgccgtcgtgacttatgagggggacactagtgcgggttataaccatgatgtgtctatactt +cgtgcatggattcgcaccactaagatagttggtgatcacccgctggtgatagagagggtccgcgccattggc +tgccattttgtcttacttcttactgcagcccccgagccgtccccaatgccttatgtcccgtaccctcgttca +acagaggtgtacgttagatccatatttggtcctggt---------gggtcgccwtctcttttcccatcagcc +t----------gctctaccaagtcta-cattccatgccgtcccggtccatatctgggaccggcttatgctct +ttggtgccaccttagatgaccaggccttttgctgctcgcggcttatgacctacctccgcgggattagttata +aagtgaccgttggcgcacttgtcgccaacgaaggctggaacgcctcggaggatgcgctaaccgctgtgatta +ctgcagcgtatttgactatttgtcatcagcgctacctacgaacacaggccatttctaaaggcatgcgccggc +tagaggtcgagcacgcccaaaaatttatcacaaggctatatagctggctgtttgaaaagtc---------tg +gccgtgattacatccccggtcgccagctccaattttatgcgcagtgccgccgctggctctcggccggcttcc +atctggaccccagagttctcgttttcgatgaggcggtcccctgc---cgatgccggagcttcctaaagaa-- +----ggtcgccggaaaattttgctgctttatgaagtggctggggcagga------gtgtacttgttttttgg +----------------agccggcggaaggcctggttggtgactgtggc--------catgataatgaggcct +atgaggggtctgaggtggaccccgccgaacctgctcaccttgatgtctctgggacttatgcggtccacggcc +gtcagcttgaggctctatatagagcgcttaatatcccagatgacattgcagctcgtgcgtcacgtctaacgg +ctaccgtggagcttgccgccagtccaggcagactcgaatgccgtacggtgcttgggaataagattttccgta +catcaataactgatggtgcccatctcgagaccaacggtcc------------------------tgagcagt +acgttttgacatttgatgattctcgccaagcgatgggggctgggcctcacagcctcacgtatgaacttgtcc +ccgctggtctgcaggttaaaatatcttct-------aatggcctggattgtaccgccatattccct---cct +ggtggggcgccgagcgctgcaccaggcgaagtggcggctttctgtrgcgccctatacaggtataataggttc +acccagcrccattcgctgactggcgggctgtggctgcaccccgaggggctccttggcccgttcccccctttc +tccccagggcatctttgggagtctgcaaaccccttttgcggtgagagcacactttatacaagaacttggtcc +acatctggtttttctagcgacttctccccacccgaggcggcttatgccgccccagtccctgatat----ggg +gttgacctcgggtgccccctcctccgttagtgatat-----------------ctgggtgtt---------- +---------ttcaccgccc----tctgaggggt--------------cggcgatcatttcgccacccataac +cccggtcggtaagccaactag---------------------------------------tccacc------ +------------------------------------------------------------------------ +-tggtcatac-------------------------------------------------------------- +-------------tacacct----aggccacccgtccgtgagccgaccataccaccaccggtcctaacccca +g---------------------------------------------ctagtaagccagctaatccgcctagc +cttactgcaagtagg-------------------------------------ccccccgtctgtgagccgcc +taaaccgcc--------------------------------------atcggctagcactcgccggc----- +-------------------ttctttatacatatcctgatggggccaaggtgtatgcaggctctctgtttgag +tcagattgttactggctggttaatgcatctaaccctggccaccgtcctggcggtggtctctgccatgcattt +taccagcgttttccagagtcgt------tccatccgaccgattttgttatgcgcgaggg---tctcgccgca +tatactttgagcccgcgcccgatcattcatgctgtggcccctgactatagggttgagcaaaaccccaagagg +ctggaggcggcatatcgtgagacctgttcccgcctcggcacagctgcctacccactactggggtcaggaatt +taccaggtccctgtaggtctaagctttgacgcctgggagcgtaatcaccgcccaggcgatgaactttacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagcctaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacaccgc +cc------------gcacagccaaccttgcgcttgagattg------------actccgctactgaggtcgg +tcgtgcctgc---gccggttgcactattaaccccggagttgtccactaccagttcaccgccggggttcctgg +ctccgggaagtctaggtctatacagcagggggatgtygatgttgtggtcgtgccaactcgcgagcttcgcaa +cagttggcggcgccgcggctttgctgcttttacacctcatacagcagctcgtgtcactgccggccggcgcgt +ggtgatagatgaagcaccttcacttccaccgcacttgctgttgctccatatgcagcgagcctcatcagtcca +tcttcttggcgaccccaatcagatccctgccattgactttgagcacgccggtttggttccggcgattcgccc +tgagctagctcctactagttggtggcatgtcacccaccgttgccccgccgacgtatgtgarctcatacgcgg +ggcctacccaaagattcagacaaccagccgtgtgttgagatctctattttggaatgag------cctgcgat +aggtcagaggctggtttttacgcaggcagccaaggccgccaatcccggcgcaattaccgttcacgaggccca +gggggccacgtttactgagactactatcatagccacggccgacgctagaggtcttattcaatcttcccgcgc +acatgccatcgttgcacttacccgccatacagaaaagtgtgttattcttgacgctcctggcctattgcgtga +ggttggcatttctgatataattgtaaataacttt------------------------------ttcctggc +tggtg--gtgaagtgggccaccatcgcccttctaccattccccgcggcaacccagatcagaatttagacac- +-----cctccaagctttccctccgtcctgccaaatyagtgcttaccaccagttggctgaagagctgggccac +cggccggccccagtggccgccgtcctgcccccctgccctgagcttgagcaggggttactctacatgccgcag +gagcttacagtgtccgatagtgtcctaatttttgagctcacggacatagtccactgccgtatggccgcccct +agtcaacgtaaggcggttctttctacgctcgtcggcaggtacggccgccgaacgaagcttyacgaagcggcc +cactctgatgtccgcgagtctttagggaggttcatccctactatcggaccggtccaggccaccacatgtgag +ctatatgaactggttgaggccatggtggagaagggccaggacggttccgctgtgcttgagcttgacctctgc +aatcgtgatgtctcgcgtattacgttctttcagaaggattgcaacaaatttacaacaggtgagactattgcc +catggtaaggtgggccaggggatttcggcctggagtaaaaccttctgtgctttatttggcccatggttccgt +gccattgagaaggagattctggctctgctcccacccaatatcttttatggcgatgcctatgaggagtcagtg +ttctctgcggccatttctggggctggctccagtatg---gtttttgagaatgacttttctgagtttgatagc +acccaaaataatttctctct------------------tggccttgagtgcgttattatggaggagtgcggc +atgccccaatggcttattcgactgtaccatctagttagatcagcctggattctgcaagccccgaaagagtct +ttgaaaggcttctggaagaagcattcyggcgagccyggcactctcctttggaacaccgtttggaacatggcg +atcatagcacattgctatgaattccgtgacctgagagtggcagcgtttaaaggggatgattcagtggttctt +tgcagcgattaccgtcagagccgtaatgcggctactctgatagccggttgtgggttaaaactgaaggttgat +tatcggcctataggtctgtatgccggcgttgtagtggctccgggcctcggggcacttcctgatgttgttcgc +tttgcaggtcgattatctgagaagaactggggtccgggccccgagcgcgccgaacagttgcgcctagcagtt +tgtgattttcttcgagggttgacgaatgttgcgcaggtttgtgtcgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacagactattgctgatggaaaggcccattt +tactgagactgttaagcccgtgctggatcttacaaactccatcatacagaggattgaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaatccggggctggagctcgcccta +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgccgtcgatctacccca---------gctggggctgcgccgttaac +tgctgtctcaccagcgcctgatacggccccagtccctgatgttgactctcgtggcgctatcttgcgccgtca +gtataatttgtccacctcccctttaacttcgtctgttgcctctggaactaatcttgtcttatatgctgcccc +gcttaatcctctcctgcctcttcaagacggcaccaatactcacatcatggcgactgaggcgtctaattacgc +ccagtaccgggttgtccgggctacaatccgctatcgccccttggtgccgaatgccgtcggtggttatgctat +ttctatttctttctggcctcagactacaactacacccacctctgttgatatgaattccattacttctactga +tgttaggattttagtccagcctggcatagcctctgagcttgtcatccctagtgagcgccttcactatcgtaa +tcaaggctggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggcttggtcatgctttg +tattcatggctcccctgttaattcttataccaacacgccctacactggggcactggggctccttgatttcgc +actcgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgttacactagtacagc +ccggcaccgcctgcgtcgtggtgccgatgggacagctgagcttacaaccactgcagccacacgttttatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggtgaggtgggtcgtggtatagccctaacgctatt +taatcttgctgacacacttctcggtgggttaccgacagaattgatttcgtcggctggaggtcagctgtttta +ctcccgcccggttgtctcagccaatggcgagccaactgttaagttatacacctctgtcgagaatgcacagca +agataagggtattgctataccacacgatatagacttaggggattcccgtgtggttatacaagattatgacaa +ccaacatgaacaggaccggcctaccccgtcgccggccccatcccgtcccttctcagtccttcgagccaatga +tgtcctgtggctctc-----------------------------cctgactgcagctgaatatgac------ +cagactacttatggctcgtcaaccaatcctatgtatgtttcagatactgtcacatttgt---taatgtggcg +acaggcgcccaggctgttgctcgatcccttgattggtccaaggtcactttggacggccggccacttactacc +at-----ccagcagtactccaagacattttatgtgc-tgccgcttcgtggcaagctttctttttgggaagct +ggtacgactaag--gctggctatccttacaattacaacactactgctagtgaccagattctgattgagaatg +cagccggccat------cgtgttgctat-atctacttacactactagccttgg--------------cgccg +gccctgtgtctgtttc-tgcagtcggcgttcttgctccgcactctgctttagctgtgcttgaagatactatt +gatt---------atcccgcccgtg----cccatactttcgatgatttctgccctgagtgccgtaatc---t +cggcctacagggctgtgctttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-t-c--ctt------gt +gccc-c-t--------tc-taat-ct-ct----gc-ct-tgtt----------------att-t-------c +ttttt------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444130.1/17257/1-7257 |Hepeviridae isolate HEPAC179, complete genome +--------------------------------------------------------c-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttctatcccgtattcagactgatatcct +tattaacctgatgcaacctcggcagcttgttttccggcctgaagttctctggaatcatccgatccagcgggt +tatccataatgagctggagcaata---ctgccgggccc-gtgctggccgatgtcttgaggtgggcgctcacc +caagatccattaatgataaccccaatgttctgcaccggtgctttcttcgcccggtcggtagagacgtccagc +gctggtattctgcccccacccgtggcccagcggctaactgccgccgctctgcgctacgtggtttgccccccg +tcgatcgcacatattgcttcgacgggttttcccgctgcgcctttgctgctgagaccggaattgctttatact +cactgcatgacctttggccctcggacgttgcggaggccatggctcgccacgggatgacgcgattgtatgctg +ccctccaccta-ccccctgaggttctgttaccacctggcacttaccacacaacttcctatcttttgattcac +gacggcaatcgtgccgtcgtgacttacgagggtgatactagtgcgggctataatcacgatgtgtctatactt +cgtgcatggatccgcaccaccaaaatagttggcgaccacccactggtaatagagagagtccgcgccatcggc +tgccattttgtcctacttcttactgcagcccccgagccatccccaatgccttatgttccgtaccctcgctca +acagaggtgtatgttagatccatattcggtcctggt---------gggtcaccttctctttttccgtcagcc +t----------gctctactaagtcta-cattccatgccgtcccggttcatatctgggaccggctaatgcttt +ttggtgccaccttagacgaccaggccttttgctgctcgcggcttatgacctatctccgcgggattagttata +aagtgactgttggcgcacttgtcgccaacgaaggctggaatgcctcggaggacgcgctcaccgctgtgatta +ctgcagcgtatctgaccatctgccatcagcgctacttacgaacacaggctatttctaaaggcatgcgtcggt +tagaggttgagcatgcccaaaagtttatcacaaggttatatagctggctgtttgaaaagtc---------ag +gccgtgactacatccccggtcgccagctccagttttatgcacagtgccgccgttggctctcggccgggtttc +atcttgatcctagagttctcgtttttgacgaggcggtcccttgc---cgctgccggagcttcttaaagaa-- +----ggttgccggaaaattctgttgttttatgaaatggttgggccagga------gtgcacctgcttcttgg +----------------agcctgtggaaggccttgttggtgattgtggc--------catgataacgaggcct +atgaggggtctgaggtggaccccgccgagcctgctcatcttgatgtttccgggacctatgcagtccacggcc +gccagcttgaggctctatatagagcgctcaatatcccagatgacatcgcggctcgtgcgtcacgtctgacgg +ctactgtggaacttgccgccagcccaggtcgactcgagtgccgtacggtacttgggaataagacttttcgca +catcaataactgatggcgctcacctcgaggctaacggtcc------------------------cgagcagt +acgtcctgacatttgatgactctcgccaggccatgggggctggaccacacagccttacgtatgaacttgtcc +ctgccggcttgcaagtcaaaatatcttct-------aatggcctggattgtactgccgtattcccc---cct +ggtggggcaccaagtgcagcaccaggtgaagtggcggctttctgcagcgccttatacaggtacaataggttc +acccagcgccattcgctggccggcgggttgtggctgcaccctgaggggcttcttggcctctttccccctttc +tccccggggcatctytgggagtctgcaaaccccttttgtggtgagggcacactttacacacgaacgtggtct +acatctggtttttccagcgacttctccccacccgaggcggcctatgccgccccagcgcccgacat----ggg +gctaccctcgggcgcctcctcatccgctagtgatat-----------------ctgggcttt---------- +---------cccaccgccc----tctgagaggt--------------cgacgaccgctccaccacccgtaaa +cccagttagtaagccagctaa---------------------------------------tctacc------ +------------------------------------------------------------------------ +-aagtcttgc-------------------------------------------------------------- +-------------cacacct----aggtcccctgttcgtgagccacctacaccaccaccggctctcaccccg +g---------------------------------------------tcagtaagccggctagcccgtctagc +cttactacatgcagg-------------------------------------cctcctgcccgtaagccacc +cacaycacc--------------------------------------accggcctgcactcgccggc----- +-------------------tcctttatacataccctgatggggccaaggtgtatgcaggctctttgtttgag +tctgattgtgactggcttgttaatgcatctaatcccggccaccgtcctggcggcggtctctgtcatgcattt +taccaacgcttcccggagtcat------tccatccaactgattttgttatgcgtgatgg---tctcgccgca +tatactttgagcccacgcccgatcattcacgcagtggcccccgattatagggttgagcagaaccccaagagg +ctggaggcggcatatcgtgagacctgctctcgcctcggcacagccgcgtatcctctactggggtcagggatt +taccaggtccctgtgagtttaagtttcgacgcctgggagcgtaaccatcgcccaggtgatgaactgtatctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacaccgc +cc------------gcacggctaaccttgcgcttgagatyg------------actctgccactgaggtggg +ccgtgcttgc---gctggctgtactattaaccccgggattgtccattaccagttcaccgccggggtccctgg +ctctgggaagtctagatccatacagcagggggatgttgatgttgtggtcgtaccaactcgtgagcttcgtaa +cagttggcgacgccgtggctttgctgcttttacaccccacacagcagctcgtgttactgccggccggcgtgt +ggtgatagatgaggcaccttcgcttccaccgcatttgttgctgctccacatgcagcgtgcctcatcggtcca +tctccttggtgaccccaaccagattcctgccattgactttgagcacgctggtttggtcccggcgattcgtcc +cgagttagctcctactagttggtggcatgttacccaccgctgccccgccgatgtatgtgaacttatacgcgg +ggcctaccccaagatccagacgaccagtcgtgtgctgagatctttattctggaatgaa------cctgcggt +gggtcagaggctggttttcacgcaggcagccaaagcggccaaccccggcgcaatcaccgtccatgaggccca +gggtgccacgtttactgagactactatcatagccacggccgatgctaggggtcttattcaatcctcccgcgc +acatgccattgttgcgctaactcgccacacagaaaagtgcgtcattctcgacgctcctggcctgttgcgtga +ggtcggcatctccgatataattgttaataatttt------------------------------ttcctggc +cggtg--gcgaagtgggccaccaccgcccttcaattataccgcgcggcaacccagaccgaaacttagacac- +-----cctacaggcattccctccgtcctgccaaattagtgcctaccaccaattggctgaagagctgggccac +cggccggcccctgtggccgccgtcctgcccccttgccctgagcttgagcaggggttactctacatgccgcag +gagcttgcggtgtccgatagcgtcctagtttttgaactcacggacatagtccactgccgtatggccgccccc +agccagcgtaaggcggttctttctacgctcgtcggtaggtacggccgccgaacgaagctgtatgaagcggcc +cattctgatgtccgtgagtctttaggaaggtttatccctactatcggcccggtccaggccaccacttgtgag +ttatatgagctggttgaggccatggtggagaagggccaggatggctccgccgtgcttgagctcgacctctgc +aaccgtgatgtctcgcgtattacattcttccagaaggattgtaataaatttacaacaggtgagaccattgcc +cacggcaaggtgggccagggcatttcggcttggagtaagactttctgtgctttattcggtccgtggttccgt +gccattgagaaggagatcctggctctgctcccacccaacattttctatggcgatgcctatgaggagtcagtg +ttttctgcagccatttctggggctggctccagtatg---gtttttgagaacgatttttctgagtttgatagt +acccaaaacaatttttctct------------------tggccttgagtgtgtcattatggaggagtgtggc +atgccccagtggcttatccgactgtatcatttagttagatcggcctggatcttgcaagcccctaaagagtct +ctgaaaggtttctggaagaagcattcyggcgagcctggcaccctcctttggaataccgtttggaatatggct +atcatagcacactgctatgagttccgtgacctgagggtggcagcgtttaagggggatgattcagtggttctt +tgcagtgattaccgccagagccgcaatgcggctaccctgatagccggttgtgggttgaaattgaaggttgat +taccggcctataggtttgtatgccggcgttgtggtggccccgggcctcggggcacttcccgatgttgtccgg +ttcgccggacgactatctgagaagaactggggcccgggccccgagcgcgccgaacagctgcgcctagcagtt +tgtgatttccttcgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacagactattgctgatgggaaggcccactt +tactgagactgttaaacctgtgctggatcttacaaattctattatacagaggttggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgccatgtgccctagggctgttct +gttgttgctcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcttaccacaacccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtctctccagcgcctgatacggccccggtccctgatgttgattctcgtggtgctatcttgcgccgtca +gtataatttgtccacctctccattaacttcatctgttgcttctggaactaatcttgtcctgtatgccgcccc +gcttaatcctcttctgcctctccaagacggcaccaatactcacattatggcgaccgaggcgtctaattacgc +ccagtatcgggttgtccgggccacaatccgttatcgccctttggtgccgaatgccgtcggtggttacgcaat +ctcaatttccttttggcctcagactacaactacacctacttctgttgatatgaattccattacttctactga +tgttaggattctagtccagcctggcatagcctctgagcttgtcattccgagtgagcgccttcactaccgtaa +tcaaggctggcgttctgttgagacatcgggtgtggctgaggaggaggcgacatcaggtctggttatgctttg +tattcacggctcccctgttaattcctatactaatacaccctatactggggcattagggcttcttgattttgc +actcgagcttgaattcagaaatttgaccccggggaacactaacacccgtgtgtcccgatacactagtacagc +tcggcaccgtttgcgccgcggtgccgatgggacagccgagcttacaaccaccgcagccacacgttttatgaa +ggacttgcatttca---ctgggacaaat---ggagttggtgaggtaggtcgtggtatagccttaacgttatt +taatcttgctgatacacttctcggcgggttgccgacagaattgatttcgtcggccggaggtcaactgttcta +ctcccgcccggttgtctcagccaatggcgagccagctgttaagttatacacctctgtcgagaatgcacagca +ggacaagggtattgctataccacatgatatagacttaggggattcccgagtggttatacaagattatgacaa +ccaacatgagcaggaccggcccaccccgtcaccggccccgtcccgccccttctcggtccttcgagccaatga +tgttctgtggctctc-----------------------------tctgactgcggctgaatacgat------ +cagaccacctatggctcgtctaccaaccccatgtatgtttcagatacagtcacatttgt---taatgtggcg +acaggtgcccaggccgttgcccgatcccttgattggtccaaggtcactttggatggccggccacttactacc +at-----acagcagtactctaagacattttatgtac-tgccacttcgtggcaagctttccttttgggaagct +ggcacgactaag--gctggctacccttacaactataacactactgctagtgaccagattttgattgagagtg +cagccggtcac------cgtgttgccat-atctacttatactactagtcttgg--------------tgccg +gccctgtgtctgtttc-tgcggtcggcgttcttgccccgcactctgctttagctgtgcttgaggatactatt +gact---------atccagcccgtg----cccatactttcgatgatttctgccctgagtgccgcaatc---t +tggcttgcagggctgtgctttccagtc--------tactgttgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt-----c-ccct-ttt------gt +gccc-cct--------tc-ta--------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444131.1/17166/1-7166 |Hepeviridae isolate HEPAC35, complete genome +------------------------------------------------------------------gatgc- +---catggaggcccatcagttcataaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccttggcgaatgctgtggtggtccggccgtttttatctcgtgtacaaacagagattct +cattaatttgatgcaaccccggcaactggttttccgtcctgaggtgctctggaatcaccccatccaacgtgt +tatacataatgagttggagcagta---ctgccgggccc-gggccggccgctgcctggaaattggggcccatc +caaggtcaattaatgataacccaaatgtcttgcaccggtgttttctgcgcccagtcgggagggatgtccaac +gctggtattctgcccccacccgcggccctgcggccaactgccgtcgatccgcgttacgtggtctccctcctg +ttgaccgcacctactgctttgatgggttttcccgctgtgcttttgccgcagagactggtgtggccctttatt +ccctgcatgatctttggccagccgatgtcgcagaggccatggcccgacacgggatgactcgtttgtatgcag +cgctacacctc-cctcccgaggtactgctaccacccggtacttaccatactacctcgtacctcctgatccat +gacggtgatcgcgccgttgtgacttatgagggcgacaccagcgcgggttacaaccatgatgtttccatactc +cgtgcgtggattcgcacgactaagattgttggtgaccatccgctagtgatagagcgtgtgcgggccatcggc +tgccactttgtgctgttgctcactgcggcccctgagccgtcacctatgccatatgtcccataccctcggtca +acggaggtgtatgttcgttccatattcggccctggt---------gggtctccgtccttgtttccatcagct +t----------gctctaccaaatcta-cattccatgccgtcccggtccatatctgggaccggctcatgctct +tcggcgctaccctggatgatcaggcattttgttgttcgcggcttatgacttatctccgtgggattagttaca +aggttactgttggtgcccttgtcgccaatgagggttggaatgcctcggaggacgcccttactgctgttatca +ctgcagcgtatttaactatttgtcaccagcgttacctccgcacccaagcgatatctaagggcatgcgccggt +tggaggttgaacatgctcagaagtttattacaagactttacagctggctatttgagaaatc---------tg +gtcgtgactatatccccggccgccaacttcagttttacgcgcagtgccgccgctggttatcagcaggtttcc +atcttgaccccagggtgcttgtctttgatgagtcagtgccctgc---cgttgcaggacgtttttaaagag-- +----ggcagcaggtaaattctgttgttttatgaaatggctggggcagga------gtgcacctgctttttgg +----------------aaccagcggagggcctggtcggtgatcaaggc--------cacgacaacgaagctt +atgagggctcggaggttgaccaggctgagcccgttcatcttgatgtctcggggacttacgccgttcatgggc +gccagctcgaggctctgtatagggcacttaatattccacacgacattgctgcccgggcatctcgcctaacgg +ctaccgtcgagcttgttgcaaacccagatcgtttagagtgccgtactatactaggaaataagaccttcagga +caacggtggtcgacggtgcccacctcgaggcgaacggccc------------------------tgagcagt +atgtcctttcatttgatgcctcctgccagtctatgggggccggtccgcacagcctaacttatgagctgaccc +ccgctggcttgcaagtgaagatctcgtcc-------aacggcctagattgcaccgcgacgttcccc---ccg +ggcggcgcccccagtgccgcaccgggtgaagtcgcggccttttgtagcgccctctataggtacaatcggttc +actcagcrgcactcgctgacaggtggtctatggctgcatcccgaggggttgttaggaattttcccccctttt +tcccctggacacacctgggagtctgctaatcccttctgtggtgaggggactttgtacacccggacttggtct +acatcaggtttttccagtgacttttctccgcccgaagcagccgcccctgtgccagccgctgctcc----ggg +agtgcccc---gccctacaccccctgttagtgatat-----------------ttgggtgtt---------- +---------accacctgcc----tctgaaga-----------------ccaggctgatgcgacgcctgaccc +ctctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttttcgagcatgctcgaccgtctagc +cctgccaagcctagg-------------------------------------gcccctgtgcataagccacc +gacaccacc--------------------------------------gccccctcgtacccgccgcc----- +-------------------tcctctacacctatccggacggcgctaaggtttatgcagggtcgttgttcgag +tcggattgtgactggctggtcaacgcatctaaccctggtcatcgccctggaggtgggctctgccatgccttt +taccaacgttaccctgagtcat------tccacccgactgaatttgttatgcgtgatgg---cctcgctgcg +tatactcttaccccccgccctattatccacgcagtggcccccgattatagggtcgagcagaatcctaagaga +cttgaggcggcgtaccgagagacctgttcccgccgcggtaccgctgcttacccacttttgggctcgggcata +taccaggtcccagttggcctcagctttgacgcctgggagcgcaatcaccgccctggggacgagctctatctt +actgacctcgctgccgcc-------------------------------------------------tggtt +tgaggccaacaagcctacgca--------------------------------------------------- +------------------------------------------gccggctctcacaataactgaggacacagc +cc------------gaacagccaatctagcactggaacttg------------acgctgccactgaggtcgg +ccgcgcctgt---gccggctgcatagtcagtcccggcattgtgcactaccagtttaccgccggcgtcccggg +ctcggggaagtcccggtyyatacagcagggggatgtygatgtggtggttgttcccacccsggagctccgcaa +cagctggcgccgccsgggttttgcggcctttacaccacacacggcggctcgtgtcacctcgggccgccgcgt +tgtcattgatgaggccccctccctcccaccacatttgctgctgttacatatgcagcgggcctcgtcggttca +tctcctcggcgacccaaaccagatccctgccatagacttcgagcatgctggcctggtccccgcgatacgccc +cgagcttgcgcccactagctggtggcatattacacaccgctgccctgctgatgtgtgcgaacttatccgcgg +ggcctatccaaagattcagaccacgagccgtgtactccgctccttattttggaacgag------cccgccac +tggccagaagttggtttttacacaggccgccaaagctgctaaccctggtgcgatcacggtccacgaggccca +gggtgccacttttacggagaccactatcatagctacggctgacgccagaggcctaattcaatcgtctagggc +ccacgctatagtagcactaacccgccacacagagaagtgcgtcatactggatgctcccggcttgttgcgtga +agttggtatatccgacataatcgttaataatttc------------------------------ttccttgc +cggtg--gcgaggtgggccaccaccgcccctctgtaataccccgtggtaaccctgaccagaatcttgcgac- +-----gcttcaggcgttcccaccttcctgccaaattagtgcttaccatcagctggctgaagaattgggccat +cgaccagcccctgtcgcagcggtcttgcccccctgccctgaacttgagcagggcctgttgtatatgccgcag +gagcttacagtgtctgacagtgtgttagtttttgagctcacggacatagttcattgccgcatggctgccccc +agtcagcggaaggccgtcctatcgacgcttgtggggaggtacggtcgtaggacgaagctgtatgaggccgct +cactctgatgtccgcgagtccttagccaggtttatccccaccattggacccgttcaggccaccacatgtgaa +ctttatgagctggtcgaggctatggtggagaagggtcaggacggttccgctgtcctggagctcgacctttgc +aaccgtgatgtttcgcgtattacattcttccagaaagactgtaataagttcaccaccggcgagaccattgct +cacggtaaagtcggccagggcatctcagcttggagtaagaccttctgcgccctgttcggcccgtggttccgt +gctattgagaaagagatactggctctgctaccgcccaacattttctacggtgatgcctacgaggagtctgtg +ttcgccgccgctgtatctggggcggggtcatgcatg---gtattcgaaaatgacttctcagagtttgatagt +actcagaataatttctccct------------------tggccttgaatgtgtgattatggaggagtgtggc +atgccccagtggctaatccggctgtaccatctggtccgatcggcctggattctacaggcgccgaaggagtcc +cttaaaggattctggaagaagcaytctggmgagcccggcacccttctttggaacaccatttggaatatggcg +attatagcacactgctatgaatttcgcgactttagggttgccgcttttaagggtgatgattcagtggtcctc +tgtagtgactatcgccagagccgcaatgcggcagttctgattgctggctgcgggcttaaactgaaggttgac +taccgccccatcgggttgtatgccggtgtggtggtggctcctggcttggggacgctacccgatgtagtgcgt +ttcgccggccggctttccgagaagaattggggtcccggcccggagcgggccgagcagttacgccttgcagtt +tgtgatttccttcgtgggctgacgaatgttgcgcaagtttgtgttgatgtcgtgtctcgtg-------ttta +cggggttagccctggattggtacataacctcatcggcatgctgcagaccattgctgatggcaaggctcattt +tacagagactgtcaaacctgtgcttgaccttacgaattccatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------gtcaccatgcgccctagggctgttct +gttgctgctcttcgtgtttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccggctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcatttcacaacccsgggctggagctcgccctc +gacagccgccccg---------------cccccttggctccacttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctgcccca---------gctggggctgcgccgttgac +cgccgtgtcgccagcccccgacacggctcccgtgcctgacgtagattcccgcggtgctatactgcggcggca +gtacaacttatctacgtcaccattaacctcatctgttgcctcaggcactaatctggttctttatgctgcccc +gctaaaccccctcctgcccctccaggatggtaccaacacacatattatggccaccgaggcgtccaattatgc +ccagtaccgggtcgtccgagctacgatccgttaccgcccgttggtgccgaacgccgttggtggttatgcaat +ttctatttcattctggccccagactactaccacccccacgtctgtggacatgaattctatcacctccactga +tgttaggatcctggtccagcctgggattgcctctgagttggttatccctagcgagcgtctccactaccgcaa +tcagggttggcgctctgttgaaacatcaggtgtggctgaagaggaggccacttctggcctagtgatgctttg +tattcatggctcccctgttaattcctatactaacaccccctacactggggccctggggsyycttgactttgc +attagaacttgagtttaggaatttgacacccgggaacactaacacccgtgtgtcccgctacactagcacagc +ccgccaccggctccgccgcggggccgacggtactgccgagctcaccactacggcagccacgcgttttatgaa +ggacctacacttca---ccggcacgaat---ggggttggcgaggtgggccgcggtattgctctgacgttgtt +caatcttgctgatacgcttctcggtggtttgccgacagaactaatttcgtcggccgggggtcagttatttta +ctcccgccctgtcgtctcagccaatggcgagccggctgttaagttgtatacatctgttgagaatgcgcagca +ggacaaaggaattgctatcccacatgacatagacttgggtgactctcgtgtggttattcaggactatgataa +tcaacatgagcaggaccggcctaccccttcgcccgccccgtctcgcccgttttcggtccttcgtgctaacga +tgttctgtggctctc-----------------------------tctcaccgccgccgagtatgac------ +cagactacatatgggtcttccaccaatccaatgtatgtctcagacaccgtcacatttgt---taatgtggct +acaggagctcaggctgttgctcgttctcttgactggtccaaggttactctggacggccgccctctcactacc +at-----ccagcagtactccaaaacattctatgttc-tcccgcttcgtggaaagttgtctttctgggaggct +ggtacgactaag--gctggctatccttataattacaacacaactgctagtgaccaaattttgattgaaaacg +cggctgggcat------cgtgttgctat-ttccacctacaccactagcttggg--------------tgccg +gacctgtgtcagtctc-tgcggtcggtgtgctagcaccgcattcggccctcgctataattgaggacactgta +gact---------atycggcccgcg----ctcatacttttgatgatttctgcccggagtgccgcactc---t +tggcctgcagggttgtgctttccaatc--------tactattgctgaacttcagcgcct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattaa-tt--------cct-cct------gt +gccc-cct--------tc-atag-cttt-------------------------------------------- +-------t----gc---------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444133.1/17273/1-7273 |Hepeviridae isolate HEPAC181, complete genome +----------------------------atatctac-gacacg-------------t----cggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccctggcgaatgctgtggtggtycggccgtttttatcccgtgttcagactgatattct +tattaacctgatgcaaccccggcagcttgtgtttcggcctgaagtcctctggaatcatcctatccagcgggt +catacataacgagcttgagcaata---ctgccgagccc-gcgctggccgctgtcttgaggttggcgctcatc +caagatccattaatgataaccccaatgttctgcaccggtgctttctccgcccggttgggagagacgtccagc +gctggtatactgcccccactcgtggtccagcggctaactgccgccgttctgctctacgtggtttgccccctg +tcgatcgcacatattgcttcgacgggttctcccgctgcgyctttgccgctgagaccgggattgctttgtact +cactacatgacctttggccgtcggacgttgcggaggccatggctcgccacggratgacgcgcttgtatgctg +ccctccaccta-cctcctgaggtcctgctaccacctggcacttatcatacaacctcctaccttctgattcac +gatggtaaccgtgccgtcgtgacttatgaaggtgatactagtgcgggctataaccacgatgtgtccatactt +cgtgcatggatccgcaccaccaagatagttggtgatcacccactggtaatagagagggtccgtgccattggc +tgccattttgtcctactccttactgcagcccccgagccatccccaatgccttatgtcccgtaccctcgttca +actgaggtgtatgttagatccatatttggccctggt---------gggtcgccttctctcttcccgtcagcc +t----------gctctaccaagtcta-cattccatgccgttccggtccacatctgggaccggcttatgcttt +ttggtgctaccttagatgaccaggccttttgctgctcgcggctcatgacctatctccgcgggattagctata +aagtgactgttggcgcactcgtcgccaacgaaggctggaatgcctcagaggatgcgcttaccgctgtgatta +ctgcagcatatttgactatctgtcatcagcgctacctacgaacacaggccatttccaaaggcatgcgtcggc +tagaggtcgagcatgcccaaaagtttatcacaaggttatatagctggctgtttgaaaagtc---------ag +gccgcgactacatccccggtcgccagctccagttttatgcgcagtgccgccgttggctctcggccggctttc +acttggaccccagagtcctcgtttttgacgaggcggtcccttgc---cgctgtcggagttttttaaagaa-- +----ggttgctgggaaattctgttgctttatgaaatggttggggcagga------gtgcacctgtttyctgg +----------------agccggcggagggcctggttggtgactgtggc--------catgacaacgaggcct +atgargggtctgaggtagaccccgccgagcctgcccacctagacgtttccggracctatgcggtccacggcc +gccagcttgaggctctttatagagcgcttaatatcccagatgacattgcggctcgtgcgttacgcctgacgg +ctactgtagaacttgccgccagcccaggccgactcgagtgccgtacggtgcttgggaacaagattttcygta +catcaataactgatggtgcccatctcgaggccaacggtcc------------------------cgagcagt +acgtcttgacatttgatgactcccgccaraccatgggggctgggccccactgcctcacgtatgaacttgtcc +ctgccggtttgcaagtcagaatatcttct-------aatggtttggattgtaccgccatattcccc---cct +ggcggggcgccgagtgctgcaccgggtgaagtggcggctttctgtgccgccctatacaggtacaataggttc +acccagcgccattcgttgaccggtgggctgtggctgcaccctgaggggcttcttggtctgttcccccctttc +tctccagggcatctttgggagtctgctaaccccttttgcggtgagagcacactttatacgcgaacctggtct +acatctggtttctctagtgacttctctccacccgaggcggcttatgccgccccagcacccgacat----ggg +gccaccctcaggtgtcccctcgtctgctagtgatat-----------------ctgggtgtt---------- +---------tccgccgccc----tctgagaggt--------------cggcggtcgcaccgccacccgtaac +ctcggttagtaagccrgctaa---------------------------------------tccacc------ +------------------------------------------------------------------------ +-aagtcttgc-------------------------------------------------------------- +-------------tacacct----aggtcccctgcccgtgagccgcccataccaccaccggatttagctccg +g---------------------------------------------ccggtgatccagctaacccgtctggc +cttactccatataga-------------------------------------ccccccgcccgtaagccgcc +cgcaccacc--------------------------------------accggcccgcactcgccggc----- +-------------------tcctttacacataccctgacggggccaaggtgtatgcaggctctttgttcgag +tcagrttgtgattggctggttaacgcatctaaccctggccatcgccccggcggtggtctctgccatgcattt +taccagcgcttcccggagtcgt------tccattcgactgattttgtcatgcgtgaggg---tcttgccgca +tatactttgagtccgcgcccgatcattcatgctgtggcccccgattatagggttgagcagaaccccaagagg +cttgaggcggcatatcgtgagacctgctcccgcctcggcacagctgcttatcctctactggggtcagggatc +taccaggtccccgtaagtttaagcttcgacgcttgggagcgaaaccaccgcccaggtgatgaattgtatctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggccaataaaccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacatcgc +cc------------gyacagctaaccttgcgcttgagatyg------------actctgccactgaggtagg +ccgagcttgc---gccggttgtactattaaccccgggattgtccgctaccagttcaccgccggggtccctgg +ctctgggaagtctagatctatacagcagggagatgttgatgtcgtggttgtgccaactygtgagcttcgtaa +cagttggcggcgccgcggctttgctgcttttacacctcatacagcagctcgcgttactgccggccggcgtgt +tgtgatagatgaggcaccttcgctcccaccgcacttgctgctgctccatatgcagcgggcctcatcggtcca +tctccttggtgaccccaatcagatccccgccattgactttgagcacgccggtttggtcccagcgatccgccc +tgagctagcccctaccagctggtggcatgtcacccaccgttgccccgccgatgtatgtgagctcatacgtgg +ggcttatcccaagattcagacgacyagccgtgtgttgaggtctttgttttggaacgag------cctgcggt +gggtcagaggttggttttcacgcaggctgccaaagcggccaaccccggtgcaattaccgtccatgaggccca +gggtgccacgttcactgagactactatcatagccacggccgatgctagaggtcttattcaatcttcccgcgc +acacgctatcgttgcgcttacccgccatacagagaagtgcgtcgttcttgacgctcctggcctgctgcgtga +ggtyggtatttctgatataattgttaataacttt------------------------------ttcctggc +tggtg--gtgaagtgggccaccatcgtccctctaccataccgcgcggcaayccagaccaaaatttagacac- +-----actacgggcgtttcccccgtcctgccaaattagtgcctaccaccaactggctgaggagctgggccac +cgaccatccccagtggccgccgtcctgcccccttgccctgagcttgagcaggggctactctatatgccgcag +gagcttacggtgtccgatagcgtcctaatttttgaactcacggacatagttcattgtcgtatggccgccccc +agccaacgtaaggcggttctttctacgctcgtcggcaggtacggccgccgaacgaagctgtatgaggctgcc +cattctgatgttcgtgagtctctggggaggtttattcctactatcggaccggtccaggccaccacatgcgag +ttatatgagctggttgaggccatggtggagaagggccaggacggctccgccgtactagagctcgacctctgc +agccgagatgtctcacgcattacgtttttccagaaagactgtaataaatttacaacaggtgagaccatcgcc +catggcaaggtgggycagggcatctcggcttggagcaagaccttctgtgctttattcggcccgtggttccgt +gccatygagaaggrgatcctggctttactyccacccaacattttttatggcgatgcctacgaggagtcagtg +ttttctgcagccatttctggggccagctccagtatg---gtttttgagaatgatttttcygagtttgatagt +acccaaaataatttttctct------------------cggccttgagtgtgtcattatggaggagtgtggc +atgccccagtggcttatccgactgtaccatttagttagatcagcttggactttgcaggccccgaaagagtct +ttgaaaggtttctggaagaagcattccggcgaacctggcaccctcctttggaacaccgtctggaacatggcg +atcatagcacactgctatgaattccgtgacttgagggtggcggcgtttaagggggatgattcagtggttctc +tgcagtgattaccgtcagagccgcaatgcggctaccctgatagccggatgtgggttgaaactgaaggttgat +taccggcctataggtttgtatgccggcgttgtagtggctccgggcctcggggcacttcctgatgttgtccgg +ttcgccggscgattatctgagaagaattggggcccgggccccgagcgcgccgaacagttgcgcytagcagtt +tgtgatttcctccgagggctgacgaatgtggcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggttggtgcataaccttattggcatgctacagactattgctgatggaaaggcccattt +cactgagactgtcaaacctgtgctagaccttacaaattctatcatacaaaggttggaatgaataacatgtt- +c----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gctgttgctcttcgtgtttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtyttatcacaatccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgttaac +tgctgtctcaccagcgcctgacacggctccagtccctgatgtagactctcgtggtgctatcttgcgccgcca +gtataatttgtccacctctcctctgacttcatctgttgcctctggaactaatcttgttttgtatgctgcccc +gctcaatcctcttttgcccctccaagacggcacgaatactcacatcatggcgactgaggcgtctaattacgc +tcagtatcgggttgtccgggctacgatccgttatcgccctttggtgccgaacgccgttggcggttatgcaat +ttctatttccttttggcctcagacaactactacacccacctctgttgatatgaattctattacttctactga +tgttaggattttagtccagcctggcatagcctccgagctggtcatcccgagtgagcgccttcactatcgtaa +ccaaggctggcgctctgttgagacatcaggtgtggccgaggaggaggcgacatcaggcctggtcatgctttg +tatccatggttcccctgttaattcctatactaacacgccctatacaggggcattagggctccttgaytttgc +actcgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgatacactagtacagc +tcggcaccgtttgcgtcgtggtgccgatgggacagccgagcttacaactactgcagccacacgctttatgaa +ggacttgcatttca---ctgggacaaat---ggtgttggcgaggttggccgtggtatagccttaacgctatt +taatcttgctgatacacttctcggcgggttgccgacagaattgatttcgtcggctggaggtcaactgtttta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaaaggcattgccataccacatgatatagacttaggagattcccgtgtggttatacaagactatgataa +ccaacatgagcaggaccggcctaccccgtcgccggccccgtcccgccccttttcagtccttcgagctaacga +tgttctgtggctctc-----------------------------tctaactgcggctgaatatgac------ +cagaccacctatggctcgtctaccaatcctatgtatgtttcagatactgtcacatttgt---taatgtggcg +acgggtgcccaggccgttgcccgatcccttgattggtctaaggtcacattagacggtcgaccactcaccacc +at-----ccagcagtactccaagacattttatgtac-tgccgcttcgtggcaagctttccttttgggaagct +ggtacgactaag--gctggctacccttacaattataacactactgctagtgaccagattttgattgagaacg +cagccggtcat------cgcgttgctat-atctacttacactactagtcttgg--------------cgccg +gccctgtgtctgtttc-tgcggtcggcgttcttgccccacattctgctttagccgtgcttgaagatactatt +gatt---------atcccgcccgtg----ctcatactttcgatgacttctgccctgagtgccgtaatc---t +tggcctgcagggctgtgctttccagtc--------tactgttgctgagcttcaacgtct------------- +--------tagaatgaaggtaggyaagacccgggagtattaattaa-tt----cc-ccct-ttt------gt +gccc-cct--------cc-ta--------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444134.1/17308/1-7308 |Hepeviridae isolate HEPAC59, complete genome +---------------------------------------------------------------------gc- +---catggaggcccaccagtttattaaggctcctggcatcactaccgccattgag---caggctgctctggc +tgcggctaattccgccttggcgaatgctgtggtggttcggccgtttttatcccgtgtccagactgatatcct +tattaacctgatgcaaccccgacagcttgtgtttcggcctgaagtcctctggaaccatccgattcagcgggt +tatacataatgagctggagcaata---ctgccgagccc-gcgctggccgctgccttgaggtgggtgctcatc +caagatccattaatgataatcccaatgttctgcaccggtgcttcctccgcccggtcggaagagatgtccagc +gttggtattccgcccccactcgtggtccagcggctaactgccgccgatctgcgctacgcggtttgccccctg +tcgatcgcacatactgcttcgacgggttctcccgttgcgccttcgccgctgagaccgggatcgctttatact +cactgcatgacctttggccctcggatgttgcggaggccatggcccgccacgggatgacgcgcttgtatgctg +ccctccaccta-ccccctgaggttctgctaccacccggcacttatcacacaacctcctatcttctaattcac +gacggcaatcgtgccgtcgtgacctatgagggtgacactagcgcgggctataatcacgatgtgtctatactt +cgtgcatggatccgcaccactaagatagttggtgaccacccgctggtaatagagagggtccgtgccatcggc +tgccattttgtcttactccttactgcagcccccgagccatctccaatgccttatgtcccgtaccctcgttca +acagaggtgtatgttagatctatatttggtcctggt---------gggtcaccttctcttttcccgtcagcc +t----------gctctaccaagtcta-cattccatgctgtcccggtccatatctgggaccggcttatgcttt +ttggtgccactctagatgatcaggccttttgctgctcgcggcttatgacctatctccgcggtattagctaca +aagtgaccgtcggtgcacttgtcgccaacgagggctggaacgcttcggaggacgcgctcactgctgtgatta +ctgcagcgtacctgactatctgccaccagcgctacctacgaacacaggccatttctaaaggtatgcgtcggc +tagaggttgagcatgcccaaaagttcatcacaaggctatatagctggctgtttgaaaagtc---------ag +gccgtgactacatccccggccgccagctccagttttatgcacagtgccgccgttggctctcggccggctttc +atctggaccctagagttctcgtctttgatgaggcggtcccctgc---cgctgccggagctttataaagaa-- +----ggctgccgggaaattttgttgttttatgaaatggctggggcagga------gtgcacctgtttcttgg +----------------agccggcggaaggcctggttggtgattgtggc--------catgataatgaggcct +atgaagggtctgaggtggaccccgccgagcctgctcatcttgatgtctccgggacctatgcggtccacggcc +gtcagcttgaggctctatatagagcgcttaatatcccagatgacattgcggctcgtgcgtcacgtctaacgg +ctactgtagaactcgccgccagcccaggccgacttgagtgccgtacgctgcttgggaataagacctttcgta +catctataactgatggtgcccacctcgaggccaacggtcc------------------------cgagcagt +acgtcttgacatttgatgattctcgccaggcaatgggggctgggcctcacagcctcacgtatgaacttgtcc +ctgccggtttgcaagttaaaatatcctcc-------aatggcttggattgtaccgctatattcccc---cct +ggtggggctccaagcgctgcaccaggtgaagtggcggctttctgtagcgctctttacaggtacaataggttt +actcagcgccattcgctgaycggtgggctttggctgcaccccgaggggctccttggcctgttcccccctttc +tctccggggcatctttgggagtctgcaaaccccttttgcggcgagagcacactttatacacgaacttggtct +acatctggtttttctagtgacttctctccacccgaggcggtctatgccgccccagcacttgatac----agg +gccaccctcgggtgccccctcgtccgtaggcgatgt-----------------ctgggtgtt---------- +---------tccaccgccc----tctgaagggc--------------cggcgatcgtcccgccgcccgtgac +tccggttagtaagccaactaa---------------------------------------cccgcc------ +------------------------------------------------------------------------ +-tagtcttac-------------------------------------------------------------- +-------------cacactt----aggcctcctgcccgtgagctgtctacaccaccaccggccctaaccccg +g---------------------------------------------ccagtaattcagctaacccgcctagc +tctactacaactagg-------------------------------------cccccggcccgcgagccgcc +taggccacc--------------------------------------accggcccgcactcgcaggc----- +-------------------tcctttatacataccctgatggggccaaggtgtatgcgggctctctgtttgag +tcagattgtgattggctggttaatgcatctaaccctggccaccgtcctggtggtgggctttgtcacgcattt +taccaacgctttccggagtcgt------tccatccggttgattttgttatgcgtgaggg---tctcgccgca +tacactttgagcccgcgtccgatcattcatgctgtggcccctgattacagggttgagcagaatcctaagagg +ctagaggcggcataccgcgagacttgctcccgcctcggcacagctgcctacccgctactgggttcagggatt +taccaggtccctgtgagcttaagctttgacgcctgggagcgtaaccaccgcccaggcgatgagctttacctt +actgagccagctgccgcc-------------------------------------------------tggtt +tgaggccaacaagccaaccca--------------------------------------------------- +------------------------------------------gccagtcctaacaattactgaggatgtcgc +cc------------gcacagctaaccttgcgcttgaaattg------------attctgctactgaggtggg +ccgtgcatgc---gccggctgcactattaaccccgggattgtccactatcagtttaccgctggggttcccgg +ctccgggaagtctagatctatacagcagggggatgtcgatgtcgtggtcgtgccaactcgtgagctgcgtaa +cagttggcgacgccgcggcttcgctgcctttacaccccacacagcagctcgtgttaccgccggccggcgtgt +ggtgatagatgaggcaccttcgcttccaccgcatttgctgttgctccatatgcagcgagcctcatcggtcca +tcttcttggtgaccccaaccagatccctgccattgactttgagcacgccggtttggtccctgcgatccgccc +tgagctagcccctactagttggtggcatgtcacccaccgctgccccgccgatgtgtgcgagctcatacgtgg +ggcctaccccaagattcagacgaccagccgtgtgctgagatctttattttggaatgaa------cctgcggt +gggccagaggctggttttcacgcaggcggccaaggcggccaaccccggcgcaattaccgttcatgaggccca +gggtgctacgttcactgagaccactattatagccacggccgatgctaggggtcttattcaatcttcccgcgc +acatgccattgttgcacttactcgccatacagaaaaatgcgtcattcttgacgcccctggtctgctgcgtga +ggtcggcatttctgatataattgttaataacttt------------------------------ttcctagc +cggcg--gtgaggtgggccaccatcgcccttctactataccccgtggcaacccggaccagaatttagacac- +-----cctacgtgctttccctccgtcctgccagattagtgcttaccaccagttggctgaggagctgggccac +cggccggccccagtggccgccgtcctgcccccctgccctgagctagaacaggggctactatacatgcctcag +gagctcacagtgtccgatagtgttttaatctttgagctcacggacatagttcactgtcgcatggctgcccct +agtcaacgcaaggcggtcctttctacgcttgtcggcaggtacggccgccgaactaagttgtatgaggcggcc +cattctgatgtccgcgagtcattaggaaggttcatccctactatcggatcggtccaggtcaccacatgtgag +ctatatgagctggtcgaggccatggtggagaagggccaagacggctccgccgtgcttgagcttgacctttgt +agccgtgatgtctcgcgtattacattcttccagaaggattgtaataaatttacaacaggtgagaccattgct +cacggcaaggtgggccagggcatttcggcttggagtaaaaccttctgtgctctattcggcccgtggtttcgt +gccattgagaaggagattctggccctgctcccacccaatattttctatggcgacgcctatgacgagtcagtg +ttttctgcagcaatttctggggctggctctagtatg---gtttttgagaatgacttttctgagtttgacagc +acccaaaataatttttctct------------------cggcctcgagtgcgtcattatggaggagtgtggt +atgcctcagtggcttatccgactgtaccatttagttagatcagcctggaccctgcaagccccgaaagagtcc +ctgaaaggtttttggaagaagcattctggtgaacctggcactctcctctggaacaccgtttggaacatggcg +atcatagcacactgctatgagttccgcgacttgagagtggcagcgtttaagggggatgattcagtggttctt +tgcagtgattaccgccagagccgcaatgcggccactttgatagctggctgtgggttgaagttgaaggttgat +taccggcctataggtctgtatgccggcgttgtagtggctccgggcctcggggcacttcctgatgttgtccgg +tttgccggtcgattatctgagaagaactggggcccgggccctgagcgcgccgaacagttgcgcttagcagtt +tgtgatttccttcgaggtctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgttacagactattgctgatggaaaggcccattt +tactgagactgtcaagcctgtgctggatcttacaaattctatcatacagaggttggaatgaataacatgtt- +c----------------tgtgcagcgcccatggg------------gtcgccatgtgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgcctccgacgtcgtatcacaatccggggctggagctcgccctc +gacagccagcccg---------------ccccctcggctcctcctggcgtgaccagtccca----------- +------gcgcccccccgctgcccctcgtcgtcgatctacccca---------actggggctgcgccgttaac +tgccgtctcgccagcgcctgatacagccccagtccctgatgttgactctcgtggtgcaatcttgcgccgcca +gtataatttgtctacctctcctttaacttcatctgttgcttctggaacaaatcttgtcctgtatgccgcccc +tcttaatcctcttctgcccctccaagacggcaccaatactcacatcatggcgactgaggcgtctaattacgc +ccagtatcgggttgtccgggctacaatccgctatcgccctttggtgccgaatgccgttggtggttatgcaat +ttctatttctttctggcctcagactacaactacacccacttctgttgacatgaactccattacctctactga +tgttaggattctagtccagccaggcatagcctctgagctggtcatcccgagtgagcgccttcactaccgcaa +tcaaggctggcgctctgtagagacatcgggtgtggccgaggaggaggcgacttcaggcttggtcatgctttg +cattcatggttcccctgttaactcctacaccaatacgccctataccggagcattaggacttctcgactttgc +actcgagcttgagtttagaaatttgacccctgggaacactaatacccgtgtgtcccgctacactagcacagc +ccggcaccgtctgcgtcgtggtgccgatgggacagccgagcttacaactactgcagccactcgtttcatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggtgaggtaggccgtggtatagccttaatgttatt +taatcttgctgatacacttctcggcgggttgccgacagaattgatttcgtcggccggaggtcaactgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgtcaagttatacacctctgtcgagaatgcacagca +ggacaagggtattgctataccacatgatatagacctaggggactcccgtgtggtcatacaagactatgataa +ccaacatgagcaggaccggcctaccccgtcgccggccccgtcccgtcccttttcagtccttcgagtcaatga +tgtcctgtggctctc-----------------------------tcttactgcggctgaatacgac------ +cagaccacttatggttcatccactaaccctatgtatgtctcagacactgtcacatttgt---taatgtggcg +acaggtgcccaggctgtcgcccgatcccttgattggtccaaggtcactttggatggtcggccactcactact +at-----acagcagtattccaagacattttatgtgc-tgccgcttcgcggcaagctttccttttgggaagct +ggtacgactaag--gctggctacccttataattacaacactactgctagtgaccagattttgattgagaatg +cagccggtcac------cgtgttgccat-atctacctacactaccagtcttgg--------------tgccg +gccctgtgtctgtttc-tgcggtcggcgttcttgccccgcactctgctttagctgtgcttgaagatactatt +gact---------atcctgcccgtg----cccatacttttgatgatttttgccctgagtgccgtaatc---t +cggcctgcagggttgtgccttccaatc--------tactattgctgagcttcaacgtct------------- +--------taraatgaaggtaggyaaaacccgggaagtctaattat-tc----c-------ttt------gt +gccc-ctt--------ct-aagc-tt-------gc-tc-tgtt---------------attt-c-------c +ttttttct----gcg---------------tttccccgccccccc---------------------ggaaaa +aaaaaa----------------aaaaaaa------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444135.1/17211/1-7211 |Hepeviridae isolate HEPAC38, complete genome +-------------------gagcgcag----atgct-gtcatg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcatcactactgccattgag---caagctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatcccgtgttcaaactgatatcct +cataaacttaatgcaaccccggcagctcgtgttccgccctgaagtcctctggaaccatccgatccagcgggt +catacataacgagctggagcaata---ctgccgagccc-gcgctggccgatgcctcgaggtgggtgcccatc +caaggtccattaatgacaaccctaatgttctgcaccggtgcttcctccgcccagttgggagagatgtccagc +gctggtactcagcccctactcgtggcccagcagccaattgtcgccgttcagcgctacgtggtttgcctcctg +tcgatcgcacatactgcttcgacgggttctcccgctgcgcttttgctgctgagaccgggattgctttatact +cactacatgacctttggccctcggacgttgcggaggctatggctcgccatgggatgacgcgcttgtatgctg +ccctccactta-ccccctgaggtcctgctgccacctggcacttaccacacaacttcctatcttctgattcac +gatggtaaccgcgccgtcgtgacttatgagggagatactagtgcgggctataaccacgatgtatctatactt +cgtgcatggatccgcaccactaaaatagttggcgaccacccattggtcatagagagggtccgcgccatcggc +tgccattttgttttgctcctcactgcagcccccgagccgtccccaatgccttatgttccgtacccccgttca +acggaggtgtatgttaggtccatatttggccctggt---------gggtcgccttctctcttcccatcagcc +t----------gctctaccaaatcta-cattccacgctgttccggttcacatctgggaccggctcatgcttt +tcggcgccaccctagatgatcaggccttttgctgctcgcggcttatgacctatctccgcgggattagctata +aagtgaccgttggcgcacttgtcgccaacgagggctggaatgcctcagaggatgcgcttaccgctgtgatta +ccgcagcgtatttgactatctgccatcagcgctacctacgaacacaggccatctctaaaggcatgcgccggc +tagaggttgagcatgcccaaaagttcatcacaaggctatacagctggctgtttgaaaagtc---------ag +gccgtgactacatccccggccgccagctacagttttatgcacagtgccgccgctggctctcagctggttttc +accttgaccccagagttcttgtttttgatgaagcggtcccctgc---cgctgccggagtttcttaaagaa-- +----ggccgccgggaaattttgctgttttatgaagtggttagggcagga------gtgcacctgcttcctgg +----------------agccagcggaaggcctggttggtgattgtggc--------cacgataacgaggctt +atgaagggtctgaggtggatcccgccgagccagctcatcttgatgtttctgggacttatgcagtccatggcc +gtcagcttgaggctctatatagagcgcttaatatcccagatgacatcgcggctcgtgcgtcccgcctgacgg +ctactgtggaacttgccgccagcccgggtcggcttgagtgccgtacagtgctcgggaataagaccttccgta +cctcaataaccgatggtgcccacctcgaggccaacggtcc------------------------cgaacagt +atgttttgacattcgatgattctcgccaggcaatgggggctgggccccacagtctcacgtacgaacttgtcc +ctgccggtctgcaggttaaaatatcctct-------aatggcctagattgtaccgccatattcccc---cct +ggcggggcgccaagcgctgcaccaggtgaggtagcagctttttgtagtgccctatataggtacaacaggttc +acccagcgtcattcgctaaccggtgggctgtggctgcaccctgaggggcttcttggtctgttcccccctttc +tccccaggacatctttgggagtctgcaaaccccttttgtggcgagagtacactctacacacggacttggtcc +acatctggtttctctagcgacttttccccgcccgaggcggctcatgccgctccggcccttgatgt----ggg +gccgccctctggtgccccctcgtctgctagtgacgt-----------------ctgggtgtt---------- +---------tccaccaccc----tctgaggggt--------------cggtggctgtttcgccggccgatat +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtaagccagctaacctgcctaga +cctcccacacccagg-------------------------------------tcccccgttcgtaagccacc +tacaccacc--------------------------------------accagcccgcactcgccggc----- +-------------------tcctttatacataccctgatggggccaaggtgtatgcaggctctttgtttgag +tcagattgtgattggctggttaatgcatctaaccctggccatcgccctggtggcggcctctgccatgcattt +taccagcgcttcccggagtcgt------tccatcctactgattttgtcatgcgtgaggg---cctcgctgca +tacaccttgagtccgcgtccgattattcatgctgtggcccctgactacagggttgagcagaaccccaaaagg +ctagaggcggcgtaccgagagacctgttcccgcctcggcacagctgcttacccgctactggggtcggggatt +taccaggtgcctgtgggcttaagcttcgacgcctgggagcgtaaccaccgcccaggcgatgaactttacctc +actgagccagcagccgcc-------------------------------------------------tggtt +cgaggctaataagccaactca--------------------------------------------------- +------------------------------------------gccggccctaacaattactgaggacaccgc +tc------------gcacagccaacctcgcgctcgagattg------------actccgctaccgaggtagg +tcgtgcttgt---gccggctgcaccattaaccccggggtcgtccactaccagttcactgccggggttcctgg +ctccgggaagtctaggtctatacagcagggagatgttgatgtcgttgttgkcccaacccgtgagctccgcaa +tagttggcggcgccgcggttttgccgcttttacaccccacacggcagctcgtgttacagccggccggcgcgt +ggtgatagatgaggcaccttcgctcccaccgyactygcwgctgctccacatgcagagagcctcatcggttca +cctccttggtgaccctaaccagatccctgctattgattttgagcacgccggtttggtcccagcgatccgccc +tgagctcrcccccactagttggtggcacgtcacccatcgttgccccgccgatgtgtgtgagctcatacgtgg +ggcttacccaaagattcagacgaccagccgtgtgttgcgatccttgttttggaatgaa------cctgcggt +aggtcagaggctggttttcacgcaggcagccaaggcggctaaccctggtgcaattaccgtccacgaagccca +gggcgccacgtttaccgagactaccattatagccacggccgatgctagaggtcttattcaatcctcccgtgc +gcatgccatcgttgcacttactcgycatacagaaaaatgcgtcattctcgacgctcctggcctactgcgtga +ggtcggcatctctgatataattgttaataacttc------------------------------ttcctggc +tggtg--gtgaggtgggccaccatcgcccttctattatacctcgcggtaacccagaccagaatcttgacac- +-----cctacgagcattccctccatcctgccaaattagtgcctaccatcagctggctgaagagctgggccac +cggccggccccagtagccgccgttctgcccccctgccctgagctcgagcagggattactctacatgccgcag +gagctcacggtttccgatagtgtcctaacttttgaactcacggatatagtccactgccgtatggctgccccc +agtcaacgtaaggcggtcctttcgacgcttgtcggtaggtacggccgccgaacgaagttgtatgaggcggcc +cattctgatgtccgcgagtctttagggaggttcatcccaactatcggaccggtccaggctaccacgtgcgag +ctatatgagctggttgaagctatggtggagaagggtcaagacggctccgccgtgctcgagcttgacctctgt +agccgtgatgtctcgcgtattacatttttccaaaaggattgtaataaatttacaacaggcgagaccattgcc +catggtaaggtgggccagggcatttcggcttggagcaagactttttgtgctttattcggcccgtggttccgt +gccattgaaaaggagatcctggccctkctcccacccaacattttctatggtgatgcttatgaggagtcagtg +ttttctgcagccatytctggggctggctccagtatg---gtttttgagaacgatttttctgagtttgatagc +acccaaaacaatttctctct------------------tggccttgagtgcgttatcatggaggagtgtggc +atgccccagtggcttattcgactgtaccatctagttaggtcagcctggaccctgcaagccccgaaagagtct +ttgaaaggtttttggaagaagcattctggcgaacctggcactctcctttggaacaccgtctggaacatggca +atcatagcacactgctatgagttccgtgatttgagagtggcagcgtttaaaggggatgattcagtggttctt +tgtagtgattatcgccagagccgcaatgcagccacccttatagccggttgcgggttgaaattaaaggttgat +tatcggcctatagggctgtatgccggcgttgtggtggctccgggtcttggggcgcttcctgatgttgtccgg +tttgccggtcgactatctgagaagaactggggcccgggccccgagcgcgccgaacagttgcgtctggcagtt +tgtgatttccttcgagggttaacgaatgtcgcgcaggtctgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacagactattgccgatggaaaggcccactt +tactgagactgtcaagcctgtattggatcttacaaattctatcatacagaggttggaatgaataacatgtc- +t----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gctgctgttcctcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgscgatgtcgtatcacaatccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgctgac +tgctgtttcaccagcgcctgatacggccccggttcctgatgttgactctcgtggcgcaattttgcgccgcca +gtataatttgtccacttctcctttaacttcgtctgttgcttctgggactarccttgtcttatatgctgcccc +gcttaatcctctcttacctctccaagacggtaccaatacccacatcatggcgactgaggcgtctaattacgc +tcagtaccgggttgtccgggctacaatccgttatcgccctttggtgccgaatgccgttggtggttatgcaat +ttctrtttccttttggcctcagaccacaactacacccacctctgttgatatgaattctattacctccactga +tgtcaggattttagtccagcctggcatagcctctgaactggtcatcccgagtgaacgccttcactatcgtaa +ccagggctggcgttctgttgagacatcgggtgtggccgaggaggaggcgacatcaggtctagtcatgctttg +cattcatggttcccctgtcaattcctataccaacacgccctataccggggcgktkgggcttctcgactttgc +acttgagcttgaatttagaaatttgacccccgggaacactaacacccgtgtgtcccgttacactagcacagc +ccgacatcgtttgcgccgtggtgccgatggtactgctgagcttacaaccactgcagccacacgttttatgaa +ggacttgcatttca---ccgggacaaat---ggtgtcggcgaggtgggccgtggtatagctctaacgctatt +taatcttgctgatacacttctcggcgggctgccgacagaattgatttcgtcggctggaggtcaactgttcta +ctcccgcccggttgyctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggcattgctataccgcatgatatagacttaggggattcccgcgtggttatacaagattatgacaa +ccaacatgaacaagatcggcctaccccgtcaccggccccgtcccgccccttttcagtcctccgagccaatga +cgtcctgtggctttc-----------------------------tttgactgcggctgaatatgac------ +cagactacctatggctcgtcgaccaaccccatgtatgtttcagacaccgtcacttttgt---taacgtggca +acaggtgctcaggctgttgcccgttcccttgattggtctaaggtcactttggatggccgcccacttactacc +at-----ccagcagtactctaagacgttttatgtgc-taccactccgcggcaagctttccttttgggaagct +ggtacgactaag--gctggttacccttataattacaatactactgctagtgatcagattttgattgagaatg +cagccggtcac------cgtgttgccat-atctacatatactactagtcttgg--------------tgccg +gccctgtatccatttc-tgcggtcggcgttcttgctccgcattctgctttagctgtgcttgaagacactatc +gact---------atcccgcccgtg----cccacacttttgatgatttctgtcctgagtgtcgcaacc---t +cggcttgcagggctgcgcttttcagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggcaagacccgggagtcttaatt----a----tt-tcc--ttt------gt +gccc-cct--------tc-taaa-ct-tt----gt-tt-tgt----------------attctt-------t +ttttc------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444138.1/17328/1-7328 |Hepeviridae isolate HEPAC152, complete genome +----------------atgacgcatcg-------tc-tgaatg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccctggcgaatgctgtggtggttcggccgtttttatcccgtgttcaaactgatatcct +tattaatttgatgcaacctcgacagcttgtgttccggcctgaagtcctctggaatcatccgatccagcgagt +tatacataatgagctggagcagta---ctgccgagccc-gcgctggccgttgtcttgaagtgggcgctcacc +caagatctattaatgataaccccaatgttctgcaccggtgctttctccgcccggttgggagagacgtccagc +gctggtattccgcccccactcgtggcccagcggctaactgccgccgttctgcgctacgcggcttgccccctg +tcgaccgcacgtactgcttcgacgggttctcccgctgcgcctttgccgctgagactgggatcgctttatatt +cattgcatgacctttggccctcggacgttgcggaggctatggctcgccacgggatgacgcgcttgtatgctg +ccctccattta-ccccctgaagttctgttaccacccggaacttaccacacaacctcctatcttctgatccac +gacggcaatcgcgccgtcgtgacttacgagggggatactagtgctggttataaccacgatgtgtctatactt +cgtgcatggattcgcaccactaaaatagttggtgaccacccgctggtaatagagagggtccgcgccatcggc +tgccattttgttttactccttactgcagcccccgagccgtccccaatgccttatgttccgtaccctcgttca +acagaggtgtacgttagatccatatttggtcctggc---------gggtcgccttctcttttcccatcagcc +t----------gctctaccaagtcta-catttcatgccgtccctgtccacatctgggaccggcttatgcttt +ttggtgccaccctagatgaccaggccttttgctgctcgcggcttatgacctacctccgcggaattagctata +aagtgaccgttggcgcacttgtcgccaacgaaggctggaatgcctcggaggatgcgctaaccgctgtgatta +ctgcagcatatttgactatctgtcatcagcgctacctacgaacacaggccatttctaaaggtatgcgtcggc +tagaggttgagcacgcccaaaaatttattacaaggttatatagctggttgtttgaaaagtc---------ag +gccgtgattacatccccggtcgccagctccaattttatgcgcagtgccgccgttggctctcggccggcttcc +atctggaccctagagttctcgtttttgatgaggcggtcccctgc---cggtgccggagcttcctaaagaa-- +----ggttgccgggaaattctgttgctttatgaagtggctggggcagga------gtgtacctgctttttgg +----------------agccagcagagggcctggttggtgactgtggc--------catgataacgaggcct +atgaggggtctgaggtggaccccgccgagcctgctcaccttgatgtttctggaacctatgcggtccacggcc +gtcagcttgaggccctatatagggcgcttaacatcccagatgacattgcagctcgtgcgtcacgtctgacgg +ctaccgtggagcttgccgctggtccaggcagactcgagtgccgcacggtgcttgggaataagatcttccgta +catcaataactgatggtgcccatctcgaggccaacggtcc------------------------tgagcagt +acgtcttgacatttgatgactctcgccaagtgatgggggctgggcctcacagcctcacgtatgaacttgtcc +ctgctggtctgcaggttaaaatatcttct-------aatggtttggattgtaccgctatattcccc---cct +ggcggggcgccgagcgctgcaccaggtgaagtggcggctttctgtagcgccctatacaggtacaataggttt +acccagcgccattcgctgaccggtgggctgtggctgcaccctgaggggctcctcggcctgttcccccctttc +tccccggggcatctttgggagtctgcaaaccctttctgcggtgagagcacactttacacacgaacttggtct +acatctggtttttctagtgacttctctccacccgaggcggcttatgccgccccagtccctgacat----ggg +gttaccctcgggtgcttcttcctccgctagtgatgt-----------------ctgggtgtt---------- +---------tccgccgccc----tctgaggggt--------------tggcgatcattccgccactcataac +cccggtcggtaagccagctaa---------------------------------------tccgcc------ +------------------------------------------------------------------------ +-cggtcatac-------------------------------------------------------------- +-------------tacacct----aggccacccgtctgtgagccatctacaccactatcggccctaacccca +g---------------------------------------------tcagtaagccagctaatccgcctggc +cttactgcacctagg-------------------------------------ccccccgttcgcgagccgcc +cacaccgcc--------------------------------------atcggcccgtactcgtcggc----- +-------------------ttctttatacataccctgacggggccaaggtgtatgcaggctccttgtttgag +tcagattgttactggctggtcaatgcatctaaccctggccaccgtcctggtggtggtctctgccatgcattc +taccagcgctttccagagtcgt------ttcatccgaccgattttgttatgcgcgaggg---tctcgccgca +tatactttgagcccgcgtccgatcatccatgctgtggcccctgactacagggttgagcagaaccccaagagg +ctggaggcggcatatcgtgagacctgctcccgccttggcacagctgcctatccgctactggggtcagggatt +tatcaggtccctgtaggtctaagttttgacgcctgggagcgtaaccaccgcccgggcgatgaactttacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagcctactca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacaccgc +cc------------gcacagctaacctygcgcttgagatyg------------actccgctactgaggtagg +tcgtgcttgc---gccggctgcactatcaaccccgggactgtccattaccagttcaccgccggggtccccgg +ctccgggaagtctaggtctatacagcaaggggatgttgacgttgtggtcgtgccaacccgtgagcttcgcaa +cagttggcggcgccgcggctttgctgcttttacacctcatacagcagctcgtgttactgccggccggcgtgt +ggtgatagatgaagcaccttctctcccaccgcacctgctgttgctccatatgcagcgagcctcatcagtcca +tcttcttggcgaccccaatcagatccctgccattgactttgagcacgccggtttggtcccggcgattcgccc +tgagctagcccctactagctggtggcatgtcacccaccgctgccccgctgatgtgtgtgagctcatacgcgg +ggcctacccaaagattcagacgaccagccgtgtgctgagatctctattttggaacgag------cctgcgat +aggtcagaagctggttttcacgcaggcagccaaggccgccaatcccggcgcaattaccgttcacgaggccca +gggggccacgtttactgagactaccatcatcgctacggccgacgctagaggtcttattcaatcttcccgcgc +acatgccatcgtcgcactcactcgccacacagaaaagtgcgttattcttgacgctcctggcctactgcgtga +ggtcggcatttctgatataattgttaataacttt------------------------------ttcctggc +tggtg--gtgaagtgggccaccatcgcccttctatcatcccccgcggcaacccagaccagaacttagatac- +-----cctccaagcgttccctccgtcctgccaaatcagcgcttaccaccagttggctgaggagctgggccac +cggccggccccagtggccgccgtcttgcccccctgccctgagctcgagcagggtttactctacatgccgcag +gagcttacggtgtccgacagtgtcctaatttttgagctcacggacatagttcactgtcgtatggctgccccc +agtcaacgtaaggcggttctttccacgctcgtcggcaggtacggccgccgaacgaagctgtatgaagcggcc +cattctgatgtccgcgagtctctgggtaggttcatccctactatcggaccggtccaggccaccacatgtgag +ctatatgagctggttgaggccatggtggagaagggccaggatggttccgctgtgcttgagcttgacctctgc +aaccgtgatgtctcgcgtattacatttttccagaaggattgtaataaattcacaacaggtgagactattgcc +catggtaaggtgggccagggcatttcggcttggagtaaaaccttctgtgccttatttggcccatggttccgt +gccattgagaaggagattctggctctgctcccacccaatattttctatggcgacgcctatgaggagtcagtg +ttctctgcagccatttctggggccggctccagtatg---gtttttgagaacgatttttccgagtttgacagc +acccaaaataatttctccct------------------tggccttgagtgcgttattatggaggagtgtggc +atgccccaatggcttatccgactgtaccatttagttagatcagcctggattctgcaagccccgaaagagtct +ttgaaaggattctggaagaagcattcyggcgagcctggcactctcctttggaacaccgtctggaacatggcg +atcatagcacactgctatgaattccgtgacctgagagtagcagcgtttaaaggggatgattcagtggttctt +tgcagcgattaccgtcagagccgcaatgcggccactctgatagccggttgtgggctgaaattgaaggttgat +taccggcctataggtctgtatgccggcgttgtagtggctccgggcctcggggcacttcctgatgttgtccgc +tttgcaggtcgattatctgagaagaattggggtccgggccccgagcgcgccgaacagttacgcctagcagtt +tgtgattttcttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggttggtgcataaccttattggcatgctacagactattgctgatggaaaggcccattt +tactgagactgttaagcctgtgctggatcttacaaattctatcatacagaggttagaatgaataacatgtt- +c----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcgcaacccggggctggagctcgcccta +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgttaac +tgccgtttcaccagcgcctgacacggccccagtccctgatgttgactctcgtggcgctatcctgcgccgtca +gtataatctgtccacctctcctttaacttcatctgttgcctctggaactaatcttgtcttgtatgctgcccc +gcttaaccctcttctgccccttcaggacggcaccaatactcacatcatggcgactgaggcgtctaattacgc +tcagtaccgggttgtccgggctacaatccgctatcgccccttggtgccgaatgccgtcggtggttatgcaat +ttctatttctttctggcctcagactacaactacacccacctctgttgatatgaactccattacttctactga +tgttaggattttagtccagcctggtatagcctcagagttggtcatcccgagcgagcgccttcactatcgtaa +tcaaggctggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggcttggtcatgctttg +tattcatggctcccctgttaattcttatactaacacgccctatactggggcattggggctcctcgactttgc +actcgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgttataccagtacagc +ccggcaccgcctgcgccgtggtgctgatgggacagctgagctcacaaccactgcagccacacgctttatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggtgaggtgggtcgtggtatagctctaactttatt +taaccttgctgacacacttctcggtgggctgccgacagaattgatttcgtcggctggaggtcaactgtttta +ctcccgcccggttgtctcggccaatggcgagccaactgtcaagttatacacctctgtcgagaatgcacagca +ggataagggtattgctataccacacgatatagacttaggggattcccgtgtggttatacaagactatgacaa +tcaacatgaacaggaccggcccaccccgtcgccggccccatcccgtcccttctcagtccttcgagccaatga +tgtcctgtggctctc-----------------------------cctgactgcagctgaatatgac------ +cagactacttatggctcgtcaactaacccgatgtatgtttcagatactgtcacatttgt---taatgtggcg +acaggcgcccaggctgttgcccgatcccttgattggtccaaggtcactttggatggccgaccacttactacc +at-----ccagcagtactctaagacattttatgtgc-tgccgcttcgtggcaagctttccttttgggaagcc +ggtacgactaag--gctggctatccttacaattacaacactactgctagtgaccagattctgattgagaatg +cagccggtcac------cgtgttgctat-atctacttacactactagtcttgg--------------cgccg +gccctgtgtctgtttc-tgcagtcggcgttcttgccccgcattctgctttagctgtgcttgaagatactatt +gatt---------atcctgcccgtg----cccatactttcgatgatttctgccctgagtgccgcaacc---t +cggcctgcagggctgtgctttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-tcc---tt------gt +gccc-ctt--------ct----a-tctct----gc-tc-tgtt----------------att-t-------c +ttttttct----gcg---------------gttc--ccgctccga---------------------aaaatg +atttgg------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444140.1/17287/1-7287 |Hepeviridae isolate HEPAC158, complete genome +-------------------------------------tgtatg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccctggcgaatgctgtggtggtccggccgtttttatcccgtgctcaaactgaaatcct +cattaacttgatgcaacctcgacagcttgtgttccggcctgaagtcctctggaatcacccgatccagcgagt +tatacataatgagctggagcaata---ctgccgagccc-gcgctggccgttgtctcgaagtgggcgcccacc +caagatctattaatgataaccccaatgttctgcaccggtgctttctccgcccggttggaagagacgtccagc +gctggtattccgcccccactcgtggtccagcggctaattgccgccgttctgcgctacgcggcttgycccctg +tcgaccgcacatattgcttcgacgggttctcccgctgcgcctttgccgctgagaccgggattgctttatact +cactgcatgacctttggccttcggatgtcgcggaggctatggctcgccacgggatgacgcgtttgtatgctg +ccctccaccta-ccccctgaagttctgttaccacctggracttaccacacaacctcctatcttctgattcac +gacggcaatcgtgccgtcgtgacttatgagggggatactagtgcgggttataatcacgatgtgtctatactt +cgtgcatggattcgcaccactaaaatagttggtgatcacccgctggtgatagagagggtccgcgctatcggc +tgccattttgttttactccttactgcagcccccgagccgtctccaatgccttatgtcccgtaccctcgttca +acagaggtgtacgttagatccatatttggtcctggt---------gggtcgccttctcttttcccatcagcc +t----------gctctaccaagtcta-cattccatgccgtcccggtccatatctgggaccggcttatgcttt +ttggtgccaccttagatgaccaggccttttgttgctcgcggcttatgacctacctccgcggaattagttata +aagtgactgttggcgcacttgtcgccaacgaaggctggaatgcttcggaggatgcgctaaccgctgtgatta +ctgcagcgtatttgactatttgccatcagcgctacctacgaacacaggccatttctaaaggcatgcgccggc +tagaggttgagcacgcccagaaatttatcacaaggctatayagctggttgtttgaaaagtc---------ag +gccgtgattacatccccggtcgccagctccaattttatgcacagtgccgccgttggctctcggctggtttcc +atctggaccctagagttctcgtctttgatgaggcggtcccctgc---cgatgccggagcttcctaaagaa-- +----ggtcgccggaaaattttgttgctttatgaagtggttggggcagga------gtgtacttgttttttgg +----------------agccggcagaaggcctggttggcgactgtggc--------catgataacgaggcct +atgaggggtctgaggtggaccccgccgagcctgctcaccttgacgtctccgggacttatgcggtccacggcc +gccagcttgaggctctatatagagcgcttaatatcccagatgacattgcagctcgtgcgtcacgtctaacgg +ccaccgtggagcttgccgccagtccaggcagactcgaatgccgtacggtgcttgggaataagactttccgta +catcaataactgatggtgcccatctcgaggccaacggtcc------------------------tgagcagt +acgttttgacgttcgatgattcccgccaagcgatgggggctgggcctcacagcctcacgtatgaacttgtcc +ccgctggtctgcaggttaaaatatcctcc-------aatggcctggattgtaccgccatattccct---cct +ggtggggcgccgagcgctgcaccaggtgaagtggcggccttctgtagcgccctatacaggtayaataggttt +acccagcgccattcgttaactggygggctgtggctgcaccccgaggggctccttggcctgtttcccccattt +tccccggggcatctttgggagtctgcaaaccccttttgcggtgagagcacactttatacacgcacttggtct +acatctggtttttctagcgacttctccccacccgaggcggcttatgccgccccagtctctgacaa----ggg +gttaacctcaggtgccccctcttccrctagcgatat-----------------ctgggtgtt---------- +---------tccaccgccc----tctgaggggt--------------cggcgatyatttcgccacccacagc +cccggtcggtaagccaactaa---------------------------------------ytcgcc------ +------------------------------------------------------------------------ +-tggtcatac-------------------------------------------------------------- +-------------taaacct----aggccacccgcccgtgagccgtccacaccaccaccggccttaaccccg +g---------------------------------------------ctagtaagccrgctaatccgcctagc +cttactgtatctagg-------------------------------------cccyccgtctgcgggcagcc +tacaccgcc--------------------------------------atcggctcgcactcgccggc----- +-------------------ttctttatacataccctgatggggccaaggtgtatgcaggctctttgtttgag +tcagattgttactggctagttaacgcatctaaccctggccaccgtcctggtggtggtctctgccatgcattc +taccagcgctttccagaatcat------ttcatccgaccgattttattatgcgcgaggg---tctcgccgca +tacactttgagcccgcgtccgatcattcatgctgtggcmcccgactatagggttgagcagaaccccaagagg +ctggaggcggcatatcgtgagacctgctcccgcctcggcacagctgcctacccattactggggtcagggatt +taccaggtccctgyaggtctaagctttgacgcctgggagcgtaatcaccgcccaggcgatgaactttacctt +mctgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagcctaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactraggacaccgc +cc------------gcacagccaaccttgcgcttgagatcg------------actccgctactgaagttgg +tcgtgcctgy---gccggttgcactattaaccccgggattgttcactaccagtttaccgccggggttcctgg +ctccgggaagtctaggtctatacagcagggggatgttgatgttgtggtcgtgccaactcgcgagcttcgcaa +cagttggcggcgccgcggctttgctgcttttacacctcacacagcagctcgtgtcrctgccggccggcgtgt +ggtgatagatgaagcaccttcgcttccaccgcacctgctgttgctccatatgcagcgagcctcatcagtcca +tcttcttggcgaccccaaccagatccctgccattgactttgagcacgccggtttggtcccggcgrtccgtcc +tgagctagcccccactagttggtggcatgtcactcaccgttgccccgccgatgtttgtgagctcatacgcgg +ggcctacccaaagattcagacgaccagccgtgtgttgagatctctattttggaatgag------cctgcgat +aggtcagaagctagtttttacgcaggcggccaaggctgccaatcccggcgcaattaccgttcacgaggccca +gggggccacgtttactgagactactatcatagccacggccgacgctagaggtctcattcaatcttcccgcgc +acatgccatcgttgcactcactcgccayacagaaaagtgcgtcatcctcgacgctcctggcctattgcgtga +ggttggcatttctgayataattgtaaataacttc------------------------------ttcctggc +cggtg--gtgaagtgggccaccatcgcccctctatcatcccccgtggcaacccagaccagaacttrgacac- +-----cctccaagcgttccctccgtcctgccaaatcagcgcttaccaccagttggctgaggagctgggccac +cggccggccccagtggccgccgtcctgcccccctgccctgagcttgagcagggcttactttacatgccgcag +gagcttacggtgtccgatagtgtcctaatttttgaactcacggacatagttcactgtcgtatggccgccyct +agtcagcgtaaggcggttctctctacgctcgtcggtaggtacggccgccgaacgaagctgtatgaagcagcc +cactctgatgtccgtgagtctttagggaggttcatccctatcatcggaccggtccaggccaccacatgtgag +ctatatgaactggttgaggccatggtggagaagggtcaggacggttccgctgtgcttgagcttgatctctgc +aatcgtgatgtttcgcgtattacattcttccagaaygrttgyaacaaatttacgacaggtgagactattgcc +catggtaaggtgggtcaggggatttcggcttggagtaaaaccttttgtgccctatttggcccatggttccgt +gccattgagaaggagattctggctctrctcccacctaatattttctatggcgatgcctatgaggagtcagtg +ttctctgcggccatctctggggctggccccagtatg---gtttttgagaatgatttttctgagtttgacagc +acccaaaataatttttctct------------------tggccttgagtgygttattatggaggagtgtggc +atgccwcaatggcttatccgactgtatcatctagttagatcagcctggattctgcaagccccgaaagagtct +ttgaaaggcttctggaagaagcattcyggcgagcctggcactctcctttggaacaccgtctggaacatggcg +atcatagcacactgctatgaattccgtgacctgagagtggcagcgtttaaaggggatgattcagtggttctt +tgcagcgaktaccgccagagccgtaatgcggctactctgatagccggttgcgggttaaaattgaaggttgat +taccggcctataggcttgtatgccggcgttgtagtggctccgggcctcggggcacttcctgatgttgtccgc +tttgcaggtcgattatcagagaagaattggggtccgggtcccgagcgcgccgaacagttacgcctagcagtt +tgtgattttcttcgaaggctgacgaatgttgcgcaggtttgcgttgatgtcgtgtcccgcg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacagactattgctgacggmaaggcccattt +tactgaaactgttaagcccgtgctggatcttacaaactctattatacagaggtttgaatgaataacatgtt- +c----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgatgtcgtatcacaacccggggctggagctcgcccta +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgtcccccgtcgtcgatctacccca---------gctggggctgcgccgttaac +tgctgtctcaccagcgcctgatacggccccagtccctgatgttgattctcgtggcgctattttgcgccgcca +gtataatctgtccacctctcctttaacttcatctgttgcttctggaactaatcttgtcttgtatgctgcccc +gcttaaccctctcctgcctcttcaggacggcaccaacactcacatcatggcgactgaggcgtctaattacgc +tcagtaccgggttgtccgggctacaatccgctaccgccccttggtgccgaatgccgtcggtggttatgcaat +ttctatctctttctggcctcagactacaactacacccacctctgttgacatgaactctattacctctactga +tgttaggattctggtccagcctggcatagcctccgagttggtcatcccgagtgagcgccttcactatcgtaa +tcaaggctggcgctctgttgagacatcgggtgtagccgaggaggaggcgacatcaggcttggtcatgctctg +tattcatggatcccctgttaactcttataccaacacgccctacactggggcattggggctccttgatttcgc +actcgagcttgaatttagaaatttgacccccgggaacactaacacccgtgtgtcccgttacactagcacagc +ccggcaccgcctgcgtcgtggtgccgatgggacagctgagcttacaactactgcagccacacgttttatgaa +ggacttgcatttca---ccgggacaaac---ggtgttggtgaggtaggtcgyggtatagctctaacgctgtt +taatcttgctgatacacttctcggtgggttgccgacagaattgatttcgtcggccggaggtcagctgtttta +ttcccgcccggttgtctcggccaatggcgagccaactgttaagttatacacttctgttgagaatgcacagca +agataagggtatcgctataccacatgatatagacttaggggattcccgtgtggttatacaagattatgacaa +ccaacatgaacaggaccggcctaccccgtcgccggccccatcccgtcccttctcagtccttcgagccaatga +tgtcttgtggctctc-----------------------------tctgactgcagctgaatatgac------ +cagactacttacggctcgtcgaccaatcctatgtatgtttcagatactgtcacatttgt---taatgtggcg +acaggcgcccaggctgttgcccgatcccttgattggtccaaggtcactttggacggccggccacttaccacc +at-----ccagcagtactccaagacattttatgtgc-tgccgcttcgtggcaagctttccttctgggaggct +ggtacgactaag--gctggttatccttataattacaacactactgctagtgaccagattctgattgagaatg +cagccggccat------cgtgttgctat-atctacttacaccactagtcttgg--------------cgccg +gccctgtgtctgtttc-tgcagtcggcgttcttgctccgcactctgctttagctgtacttgaagatactatt +gatt---------atcccgcccgtg----cccacactttcgatgatttctgccctgaatgccgtaacc---t +cggcctacagggctgtgctttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-t-c--ttt------gt +gccc-cct--------tc-taat-ct-tt----gt-ct-tgtt----------------att-t-------t +tctttt------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF444144.1/17141/1-7141 |Hepeviridae isolate HEPAC57, partial genome +-----------------------gtcgtagagcacg-ca---g-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgttcctatcccgtgttcaaactgacatcct +tattaacctgatgcaaccccggcagcttgtgttccgacctgaggtcctctggaaccacccgatccagcgagt +tatacataatgagctggagcaata---ctgccgagccc-gcgctggccgctgccttgaggtgggcgctcacc +cgaggtctatcaatgataaccctaatgtcctgcaccggtgcttccttcgcccggttggaagagacgtccagc +gctggtattctgcccctacccgtggaccagcggccaactgccgccgttctgcgcttcgcggtttgccccctg +tcgatcgcacatactgcttcgatgggttctctcgctgcgctttcgccgctgagaccgggattgctttatact +cactgcatgacctctggccttcggacgttgcggaggccatggcccgccatgggatgacgcgcttgtacgccg +ccctccatctg-ccccctgaggtgttgttgccacctggcacttaccacacaacctcttatcttctgattcac +gacggcaatcgtgccgtggtgacttatgagggggatactagtgcgggctataaccatgatgtgtctatactt +cgcgcatggatccgcaccactaaaatagttggtgaccacccactggtaatagagagggtccgcgctatcggc +tgccattttgttttgcttctcactgcagcccctgagccctccccaatgccttatgtcccgtaccctcgctca +acagaggtgtatgtcaggtccatatttggccctggc---------gggtcaccttccctctttccatcagcc +t----------gctctaccaaatcta-cgttccatgctgtcccggtccatatttgggacagacttatgctct +tcggcgccactttagatgaccaggccttctgctgctcgcggcttatgacctacctccgcgggattagctata +aagtgactgttggcgcacttgtcgccaacgagggctggaatgcttcggaggatgcacttaccgccgtgatca +ccgcagcgtacttgaccatttgccatcagcgctacctccggacccaggctatttctaaaggcatgcgccggt +tagaggttgagcatgcccaaaagtttattacaaggctgtatagctggctgtttgaaaagtc---------ag +gccgcgactacatccctggccgccagctccagttttatgcacagtgccgccgttggctctcggctggtttcc +atctggaccctagagttctcgtttttgacgaggcagtcccctgt---cgctgccggagcttcttaaagaa-- +----ggtcgctggaaaattttgctgttttatgaagtggttgggccagga------gtgcacctgctttcttg +----------------aaccagctgaaggtttggtcggcgactgtggc--------catgataatgaggcct +atgaggggtccgaggttgaccccgccgagcctgctcatcttgacgtttccgggacctatgcggttcatggcc +gccagcttgaggctctatatagagcgcttaatatcccacatgacattgcggctcgtgcgtcacgtctgacgg +ccactgtggagcttgccgccagcccaggccgacttgagtgccgcaccgtgcttgggaataagaccttcagaa +catcaataactgacggtgcccacctcgaagccaatggtcc------------------------cgagcagt +acgtcttgacatttgatgattcccgccaggcaatgggagccggacctcacagccttacatatgagcttgtcc +ctgccggtctgcaggttaaaatatcctct-------aatggcttggattgtaccgctatatttccc---cct +ggtggggcgccaagcgctgcaccaagtgaagtggccgccttttgcagcgccctatataggtacaataggttc +actcagcgtcattcgctgaccggtgggctatggttgtaccctgaggggcttctcggcctgttcccccctttc +tcccctgggcatctttgggagtctgcaaatcccttttgtggcgagagcacactttacacacgaacttggtct +acatctggtttttctagtgacttctctccacccgaggcggcttgtgctgtcccagcccctgatgc----agg +gttaccctcgggcaccccctcttctgccagtgacgt-----------------ctgggtgtt---------- +---------tccgccgccc----tctgaggggt--------------cggcggttgttccaccacccgaaac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ccagtaagccagcaagcccgcctagt +tttactacacctagg-------------------------------------ccccctgcccgtaagccgcc +cacatcgcc--------------------------------------accggcccgcactcgccggc----- +-------------------tcctttacacttatcctgatggggccaaggtgtatgcaggttctctattcgaa +tcagaatgtgattggctggttaatgcatctaaccctggtcaccgtcctggtggtggcctttgccatgcattt +taccagcgcttcccggagtcgt------tccatccgactgattttgtcatgcgtgaagg---cctcgccgcg +tacactttgagcccgcgcccgatcattcatgccgtggcccccgactatagggttgagcagaatcccaagagg +ctagaggcggcatatcgtgagacctgttcccgcctcggcacagctgcatacccgctgttgggatcggggatt +taccaggtccctgtaggtctaagttttgatgcctgggaacgtaaccaccgcccgggcgatgaactttacctc +actgagccagctgctgcc-------------------------------------------------tggtt +cgaggctaacaagccgactca--------------------------------------------------- +------------------------------------------gccagctctaacaattacagaggacaccgc +cc------------gtacagctaaccttgcgcttgagattg------------actccgctactgaggtggg +tcgtgcctgt---gccggctgtactgttaatcctgggattgttcactatcagtttaccgccggggttcctgg +ctccgggaagtccaggtctatacagcagggggatgttgatgttgtggttgtgccaacccgtgagcttcgtaa +cagctggcggcgccgtggctttgctgcttttacacctcacacagcagcccgtgttactgctggccggcgtgt +cgtgatagatgaggcaccttcgctcccaccgcacctgctgctgctgcatatgcagcgagccgcatcggtcca +tctccttggtgaccccaaccagatccctgctattgacttcgagcacgccggtttggtcccagcgattcgacc +cgagcttgcccctactagctggtggcatgttacccaccgttgccccgccgatgtgtgtgagctcatacgcgg +ggcatacccaaagattcagacaaccagccgtgtattgcgatctttattttggaatgaa------cctgcggt +gggtcagaggctggttttcacgcaggcagccaaggcagctaaccctggtgcaattactgttcacgaggctca +gggcgccacattcacagagaccaccatcatagccacggctgatgctaggggcctcattcaatcttcccgtgc +acacgccattgttgcactcacccgtcatacagaaaaatgcgtcattctcgacgctcctggcttactgcgtga +ggtcggtatttctgacataatcgttaataacttc------------------------------tttttagc +tggtg--gtgaagtgggtcaccaccgcccttccaccatacctcgtggcaatccggaccggaatttagacac- +-----cctacaggcgtttcccccgtcctgccaaattagtgcttatcatcagttggccgaggagctgggccac +cgaccggccccagtggccgccgtcctgcccccctgtcccgagcttgagcaggggttactctatatgccgcag +gagcttgcggtgtccgatagcgtcttaatttttgaacttacggacatagttcactgtcgtatggctgctcct +agtcaacgtaaggcggtcctttcgacgcttgtcggtaggtacggccgtcgtacgaagctgtacgaggcggct +cactctgatgtccgtgagtccctaggaagatttattcccactattggaccagttcaggccactacgtgcgag +ctatatgagttggttgaggctatggtggagaagggccaggacggctccgccgtgctcgagcttgacctctgt +agccgtgatgtctcgcgcattacatttttccagaaagattgtaataagtttacaacaggtgaaaccatcgcc +catggcaaggtgggtcagggcatctcggcttggagcaagaccttctgtgctttattcggtccgtggtttcgt +gccattgagaaggagattttggccctgctcccacccaacattttctatggcgatgcctacgaggagtcagtg +ttctctgcagccatctccggggcgggctccagtatg---gtttttgagaacgatttttctgagtttgacagt +acccagaataacttctccct------------------tggccttgagtgtgtcattatggaggagtgtggc +atgccgcagtggcttatccgattgtatcatctagtcagatcagcctggatgttgcaagccccgaaagagtct +ttgaaaggtttctggaagaagcactccggcgagcctggcactctcctctggaacaccgtctggaacatggcg +atcatagcacactgctatgagttccgcgacttgagagtggcagcgtttaagggggacgattcagtggttctc +tgcaatgactaccgccagagccgtaatgcggccaccttaatagccggctgtgggttgaaactgaaagttgat +taccggcctataggtttgtacgctggcgttgtagtggctccgggcctcggggcacttcctgacgtcgtccgg +ttcgccggtcgattgtccgagaagaactggggcccgggccccgagcgcgccgagcagttgcgtctagcagtc +tgtgattttcttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtatcccgtg-------ttta +cggggttagccccgggctggtgcataaccttattggcatgctacagactattgctgatggaaaggcccattt +tactgagactgtcaagcctgtgctggatcttacaaactctatcatacagaggttggaatgaataacatgtt- +t----------------tctgcatcgcccatggg------------atcgtcatgcgccctagggctgttct +gctgttgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtttggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtatcacaacccggggctggagctcgctctc +gccaaccggcccg---------------cccccttggctcctcttggcgcgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------actggggctgcgccgttaac +tgctgtgtcaccagcgcctgatacagcccctgtccctgatgttgactctcgtggtgctatcttgcgccgcca +atataatttgtccacctcccctttgacttcatctgttgcttcagggactaatcttgtcttgtatgccgcccc +gcttaatcctctcctgcctctccaagatggcactaacactcatattatggcgaccgaggcgtccaattatgc +tcagtaccgggttgttcgggctacaatccgctaccgtcctctggtgccgaatgctgtcggtggttatgcaat +ttctatttctttttggcctcagacaacaactacacccacctctgttgatatgaactctatcacttctactga +tgtcaggattttagttcagcctggcatagcctctgagcttgtcatcccgagtgagcgcctccactaccgtaa +tcaaggttggcgctctgttgagacttcaggtgtggccgaggaggaggcgacgtctggtttggtcatgctctg +tatccatggctcccctgttaactcttataccaacacgccctacactggggcattggggctcctcgactttgc +actcgagcttgagttcagaaaccttacccctggtaataccaacacccgtgtgtcccgctatactagcacggc +ccgacaccgtctgcgtcgtggcgccgatgggacagccgagctcacaactactgcagccacacgttttatgaa +ggacctacatttca---ccgggacaaat---ggcgttggtgaggtaggtcgtggtatagccctgacgttatt +taatcttgctgatacacttctcggcgggctgccgacagaattgatttcgtcggccggaggtcaattattcta +ctcccgcccggtcgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggcattgctataccacatgatatagatttaggggactcccgtgtggttattcaagattatgacaa +ccaacatgaacaggaccggcctaccccttcgccggccccgtcccgaccattctcggtccttcgagctaatga +tgttttgtggctctc-----------------------------tctgactgcagctgaatatgat------ +cagactacttatggttcatcgaccaaccccatgtatgtttcagatactgtcacatttgt---taatgtggcg +acaggtgcccaggctgtcgcccgttctcttgattggtctaaggtcactctagacggtcgaccacttaccacc +at-----ccagcagtattctaagacattttatgtgc-tgccgcttcgtggcaagctttccttttgggaagct +ggtacaactaag--gccggttacccttataattacaatactactgctagtgaccagatcttggttgagaatg +cagctggtcac------cgtgttgctat-atctacctatactactagtctcgg--------------tgctg +gccctgtgtctgtttc-tgcggtcggcgttctcgccccgcattctgccttagctgtgcttgaagatactatt +gatt---------accccgctcgtg----ctcatacttttgatgatttttgccctgagtgccgtaatc---t +cggtctgcagggctgtgctttccagtc--------tactattgctgagcttcagcgtct------------- +--------taraatgaaggtaggc------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH410174.1/17239/1-7239 |Hepeviridae strain BcHEVGP, complete genome +---------------------------ggtagacca-cgtatg-------------t-----ggtcgatac- +---catggaggcccatcagtttattaaggctcctggtatcacaaccgccattgag---caggctgctctagc +ggctgctaattctgccctggcgaatgctgtggtggttcggccgttcctttcccgtgcccagacagacatact +gatcaatcttatgcaaccccgtcagcttgttttccgtcctgaggtcttttggaaccaccccatccagcgtgt +cattcacaatgaacttgagcagta---ctgccgcgctc-gcgctggccgctgtctagaggtcggtgcccacc +cacgttccatcaatgataatcctaatgttttccatcggtgcttcctccggcctgttggccgtgatgtgcagc +gctggtatacagcacccacgcgcggccccgcggctaactgccgtcgctcagctctccgcggtcttccacctg +tagatcgcacctactgctttgatggcttttctggctgctcttttgctgctgagacaggggttgccttatatt +cactgcatgatctttggcctgccgatgttgcagaggctatgggccgccatggcatgtcgcgtctctatgctg +ttctgcactta-cctcctgaggtccttcttccgcctggcacttaccacacgacttcttatcttctgattcat +gatggtgcccgtgctgttgtcacatatgagggtgataccagtgctggttacaaccatgatgttgccatcttg +cgcgcctggatccgcaccacaaaaattactggcgaccacccattggttattgagagggttcgcgcgattggc +tgtcattttgtcctcctcctgaccgctgcacctgaaccttcccctatgccttatgtcccttacccccgctct +acagaggtttatgtccggtctatttttgggccagga---------ggctcaccgtccctttttccttcgtcc +t----------gcaagagtaaatcta-ctttccatgctgtccctgttcacatctgggatcgacttatgttat +ttggcgccactctggatgaccaggcattctgttgctcccgccttatgacctatcttcgtggcattagctaca +aagttactgttggcgcacttgttgctaacgagggttggagtgcatctgaggacgccctaactgctgtcatta +ccgctgcttacctcactatatgtcatcagcgctatctccgcactcaggccatttcaaaagggatgcgcaggc +ttgaggttgagcacgcccagaagttcattactcggctctatagctggttgtttgaaaagtc---------cg +gccgtgactatatccccggccgtcaggttgagttttacgcccaatgccggcgctggttatctgcagggttcc +atcttgatccgcgtgtgcttgtttttgatgagtctgcgccgtgt---cgatgccgaagcctgctccgtcg-- +----ggctgctaatagtttttgctgttttatgcgctggcttgggcagga------gtgtaactgctttttgg +----------------agcctattgaggggcacattggcgatgaaggc--------catgataatgaggcct +atgaggggtccgaggtcgatctggcagaccccgcggagcctgacccatcgggcacgtttgccgtccgtgggg +atcagctcttgcccctctttcaagcattaaacctcccatctgacctgatcgcccgcgcttcccggcttaccg +ctactgttgagcttacagttgattccaaccggctggactgcaaaaccatcttaggtaataaagtcttccgca +ccactttcattgacggcgctcgtttagaagctaatggccc------------------------cgagcagt +atgtgctctcgtttgatgccagcaagaggactatggcagccggtccttacagcctctcatatgaatttaact +cagaaggccttcaggtttcttttgtgctt-------aacgggttgagttctacaattgttttctcc---ccc +ggctgtgccccaagcccttcatccgcagaggtgacagcattctgctcggctttatataggttcaaccgatgc +actcaaaggcactctttgatcggtggtgtctggttacaccccgaggggctgctcggtgtgtttactccattc +tcccccggccatgtgtgggattccaacaaccctttttgtggcgagagtactctctacacccgcacttggtcc +acctcgggtttttctagtaatttttcaccacctgaggcagcattacctaaacctgcctcggttgc----atg +tgagcctaaaggccctcttttgcatcccacagccga------------------------------------ +-cgagtcg-cctggtgccc----ccaccgaggc------tgacc---ctgatgtcatccgtccgctattagc +cc---------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------attctgagtcagctggcgttgctgag +actacctctgctagg-------------------------------------ccatcagaacttacacctgc +acctgggcc--------------------------------------ttcagtgcgtagtcgccggc----- +-------------------ttctgcatgtatacccggatggatctaaggtttattctggttctctttttgag +tctgactgtacttggcttgtgaatgcgtctaaccctggccaccgcccaggtggtggcttgtgccacgccttt +tatcagcggtaccctgattctt------ttgaccacactaggtttatcatgcgtgacgg---tcttgctgcc +tatactttggcaccgcgtcctattattcatgctgttgcgcctgattatcgggtcgaacataacccgaaacgg +ttggaggcagcataccgtgagacatgttctcgccgcggtacagctgcgtacccgctgttgggctctggcatt +tatcaggtgcctgttgggcctagttttgatgcatgggagcgtaaccatcgtccaggtgatgagttgtatctt +tctggtccagctgttgca-------------------------------------------------tggtt +tgaggcgaacaagcctaccca--------------------------------------------------- +------------------------------------------gcctgctttggtgattactgaggatgctgc +cc------------gcactgccaacctagctcttcaaattg------------attccgccacggaggtagg +taaggcctgt---atgggtgccgttgttagccccggagttgttcactatcagtttactgccggcgtccctgg +ttccggtaagtctaggtctgttcagcagggtgatgtcgatgttgttgtggttccaactcgtgagctacgtaa +tagttggcggcgcaggggttttgcggcttttacgccgcacaccgcagcccgtgtcactcgtggccgccgggt +tgtgattgatgaggccccttctctcccgccccatctcctgcttctgcatatgcagcgggccgcatctgtaca +tttactcggtgatccaaatcaaataccagcaattgactttgaaaatgccggtctagtgcctgcaatccgtcc +tgatctggtccccactagctggtggcatgttacttaccgctgccctgccgatgtttgtgagctcattcgcgg +tgcctaccctaaaatccagactgccagccgggttgttcggtccttattctggaatgag------cctgccat +cggccagaagctagtgttcactcaagccgctaaagctgccaaccctggtgctattactgttcatgaagcgca +aggagccacttttagcgagactacaatcattgccaccgctgatgctagaggtctgatacagtcttctcgtgc +acatgccatcgttgcacttacccgccacactgaaaaatgtgtagtacttgacgcccccgggctcctacggga +aatcggtatttcagactctattgttaataacttt------------------------------ttcctagc +tggtg--gtgaggttggtcataatcgtccatctgtcatccctcgaggtagccctggtgataatgtggctac- +-----ccttgacgctttccctccatcttgccaggttagtgcttaccatcaactggctgaggaactcggtcac +cgtccatcacctgtagcagcggtgctcccaccctgtcctgacttggagcaaggtcttttgtatatgccacaa +gagcttactgtgtctgatagtgtgttggtctttgagctaactgatatagttcactgccgcatggctgctccc +agtcagcgaaaagccgtgctttcaacgcttgtcggccggtatggccgccgcactaagctctatgatgctgtc +cactctgacgttcgtcgctctctgaatcagttcatacctaccattggccctgtccgggcgaccacttgtgag +ctgtatgagcttattgaggctatggttgagaagggccaggatggttcggctgttctcgaactcgacctctgc +agccgtgatgtctcccgtattactttctttcagaaagattgtaataagtttacaactggtgagaccatttct +cacggtaaggtcggccagggcatatctgcttggagtaagaccttttgtgccctatttgggccttggttccgt +gctatagagaaggagatactggccctactcccttctaatatattctatggtgatgcttatgatgactctgtt +ttatctgctgcagtctccagtgcgaaagactgcatg---gtttttgagaatgatttctctgagtttgacagt +acccagaacaacttttctct------------------tggcctggagtgtgttttgatggaggaatgtggc +atgccgcagtggctcatccggttataccacttggtccgctcggcatggatactccaagcccctaaggagtct +ctgaaaggattctggaagaagcattcaggggagccaggcactctgctgtggaatacagtctggaatatggcg +atcattgcacactgttatgagttccgcaacctgcaggttgccgggtttaaaggtgatgactctatggttttg +tgtagcgactatcgccagagtcgtaatgcagctgttttgatcgctggttgtgggcttaaactgaaggttgac +taccgaccgattggcctttatgcgggtgttgttgttgctcccggtcttggtgtgttaccggatgtagtccga +tttgctggtcggctgtctgaaaagaattggggtccggggctggagcgcgctgaacagctccgcctcgctgtc +tgcgattttcttcgaaagctcacgaatgttgctcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagtcccggcctggttcataacctaattggtatgctccagactattgctgatggtaaggcccattt +tactcagtcaattaaaccggtgctggatctcactaattctataattcagaggctggaatgaataacatgtg- +----------------atttgcatggcccatggg------------tacatcatgtgcgctcgggctgtatt +gttgctgttcctcttgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggttc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----cactcccctatattcat---- +--------------ccaaccaacccctttgttgcagacatcacctcctcatccggggctgggtctcgccctc +gccagccgccccg---------------accactcggtaccgcttggcgtgaccaatccca----------- +------gcgccccgccgctcccactcgtcgccgatctgccccc---------gctggggcagcgccgctaac +tgctactgcccctgcttctggtacaaccccagtccccgacgtcgactctcgtggtgcgattttacgtcgtca +gtataatctatctacttccccgcttacttcatcaatcgcatccgggactaatcttgttctttatgccgcccc +gcttagccccctcttgccgcttcaagacggtactaacactcacatcatggcgacggaggcgtctaattatgc +tcagtaccgtgttgttcgtgccacaatccgctatcgcccactggtcccaaacgccgtgggcggttatgctat +atctatctccttttggcctcaaactactacaacacccacgtctgttgatatgaattctattacgtccacaga +cgttcgtattctcgtccaacctggtattgcctctgaacttgtcatccccagtgagcgtctacactatcgcaa +tcagggttggcgctccgttgaaacatctggagtggcggaggaagaggccacatctggcctcgtcatgctttg +tattcatggctcccctgttaattcctatactaatactccttacactggtgctcttggtctgcttgattttgc +tcttgagttggagttccggaatcttactcccggtaacaccaatactcgtgtatctcgttattctagcactgc +acaccaccgccttaaacgtggtgctgacggcaccgctgaattgacaactactgcagcaacaaggtttatgaa +ggatctccactttg---ctggctctaac---gggcttggcgaggttggtcgtggtatagctatgaccctctt +caatcttgctgatactctcctcgggggtctgccgacagaacttatttcgtcggcaggcgggcagttgtttta +ctcccgtcccgttgtctcagccaatggcgagcctactgttaagctttatacctctgtcgagaatgctcagca +ggataagggtatcgctataccacatgatattgaccttggtgagtctcgagttgtcattcaggactatgacaa +ccagcatgagcaagaccgtccaacgccatcccctgccccttctcggcctttctctgtactacgtgctaatga +tgttctttggctttc-----------------------------tcttactgctgctgaatatgat------ +caaaccacttatggttcgactactaatccaatgtatgtgtctgatactgttacttttgt---taatgttgct +actggagcccaaggagtttctcgtaccctggactggtctaaagttacccttgacggccgtcctcttactact +at-----tcatcagtattccaagacgttctttgtcc-ttccccttcgtggtaagctttcattctggcaggcc +ggcactacaaaa--gccggctacccttataattacaacactactgcttctgatcagatacttattgagaatg +ctgctggccac------cgtgtagctat-ctctacctatactaccagccttgg--------------cgtcg +gtcctgtatctatttc-ctgtgttggtgttcttgctccacattcagccctagctgttttggaggatactgtt +gatt---------accctgctcgtg----cccatacttttgatgatttctgcccggagtgtaattctc---t +tggtctccaaggttgtgcttttcaatc--------tactatcgctgagatacagcgtct------------- +--------taaaatgaaggttggtaaaactcgggagtcttaatcta-tt----ctgtttt----------gt +gccc-cttc----------tgta-ttgtt----gt-----------------------tatt-t-------t +ctttttct----gcg----------------tttcgcgctccctg---------------------aaaaaa +aaaaaaa---------------aaa----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH377721.1/17288/1-7288 |Hepeviridae isolate SW62BD71 polyprotein, ORF3 protein, and capsid protein genes, complete cds +agccttaataaactgatgggcctccaggcagtacca-cgtatg-------------t-----gctcgatgc- +---catggaggcccatcagtttattaaggttcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccttggcgaatgctgtggtggtccggccgttcctgtcccgtgtgcagactgagattct +tattaatctgatgcaacctcggcagctcgtgttccgacctgaagtactgtggaatcacccgatccagcgggt +tatacacaatgagctagaacaata---ctgccgggccc-gcgcaggccgctgcctagaggtcggggcccacc +caagatccattaatgataaccctaatgttttgcaccggtgtttcctgcgaccggttgggagggatgttcagc +gctggtactccgctcccacccgcggccccgcggctaactgccgccgctccgctttgcgtggccttccccccg +tcgatcgcacttactgttttgacggattttcccgctgtgcttttgctgcagagaccggtgtggccctctact +ctctacatgatctttggccagccgatgttgcggaagccatggcccggcacgggatgacacgcctgtatgctg +cactacatctc-ccccctgaagtgttgttaccacccggtacctaccatacaacttcgtaccttttgattcat +gacggcgatcgtgctgttgtaacctatgagggtgatactagtgcaggttataatcatgatgtctccatactt +cgcgcatggatccgcacaactaagatagttggtgatcacccgttggtgatagagcgtgtgcgggccatcggt +tgccattttgtgctgctgcttaccgcagcccctgagccatcaccaatgccttatgtcccataccctcggtca +acagaggtgtacgttcgttctatattcggccccggt---------gggtccccgtctctgtttccgacagct +t----------gctctactaagtcta-catttcatgccgtcccggttcatatctgggatcggctcatgctct +tcggtgccaccctagatgaccaggcattttgctgctcgcggcttatgacttatctccgcgggattagttaca +aggtcactgttggtgcccttgttgctaatgaggggtggaatgcctcgcaggacgctcttaccgctgttatta +ctgcagcgtacctaaccatttgtcaccagcgctacctccgcacccaggctatatctaagggcatgcgccggt +tggaggttgagcatgctcaaaaatttattacaagactctatagctggttatttgagaagtc---------cg +gccgtgattacatccctggccgccagctccagttttatgcacagtgccgccgatggttatcagcaggctttc +accttgaccccagggtgcttgtttttgatgagtcagtgccctgc---cgttgcaggacattccttaagaa-- +----agttgcaggcaagttttgttgctttatgaagtggctagggcagga------gtgcacctgttttctgg +----------------agccggctgagggtctggttggcgaccatggt--------catgataatgaggctt +acgagggttctgaggttgaccaggctgaacctgcacatttagatgtttctgggacctacgctgttcacgggc +gccagcttgaggccctgtatagggcgcttaacatcccacatgacattgccgcccgggcgtcccgcttaactg +ccactgttgagctagctgctggcccggatcgtctagagtgccgcaccatacttgggaataagactttccgaa +caacggtagtcgatggtgctcacctcgaggctaacggccc------------------------cgagcaac +atgttctttcgtttgacgcctctcgtcaatctatgggggccgggtcgcacaaccttacctacgagcttaccc +ccgctggcttgcaagttaagatttcatct-------aacggtctggattgcactgcaacattcccc---ccg +ggcggcgcccccagcgccgcgccgggggaggtggccgccttctgcagcgccctttataggtataatcggttc +acccagcggcactcgcttacgggtggcctgtggttgcaccctgaggggttgctgggcattttcccccctttt +tctcccggacatgtttgggagtccgccaaccccttttgcggggagggaactttgtatactcgtacttggtct +acatctggtttttctagtgactttgctcccccggaggcagctgtccctgcaccagctgctactct----ggg +gctatctc---gtcccacaccccccgttagtgacat-----------------ctgggtgtt---------- +---------gccgtcaccc----tctgaagaac--------------tccaggtcgacacgatgcccccccc +tcttg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctcctgagcccgtccaaccgcccagc +ctggccaaacctgag-------------------------------------acccctgtgcgtaagccgtc +aacaccacc--------------------------------------gcttcgccgtacccgtcgcc----- +-------------------tcctttacacctacccggacggtgctaaggtgtatgcagggtcattgtttgag +tcggactgtgattggctggttaatgcgtcaaaccccggccaccgtcctgggggcggcctttgtcatgccttt +taccagcgctaccctgagtcgt------tccatccaaccgagttcattatgcgcgatgg---tctcgccgca +tatactctgactccccgccctatcatccatgcggtggcccctgattatagggtcgagcagaatccaaagagg +ctcgaggcagcgtatcgggagacttgctcccgccgtggcactgccgcttacccacttttgggctcgggtata +tatcaggtccctgttggtcttagttttgatgcttgggagcggaatcatcgccccggggatgagctttacctg +actgatcccgccgccact-------------------------------------------------tggtt +cgaggctaataagccgacaca--------------------------------------------------- +------------------------------------------gccggctcttacaataacagaggacacagc +tc------------gcacggctaacttagcattggagattg------------atgctgctacagaggttgg +ccgtgcttgt---gccggctgcacagtcagccccgggatcgtgcattatcaattcactgctggagttccagg +ctcaggtaaatcaagatctatacagcagggggatgtggatgtggtggttgtccccacccgggagcttcgtaa +tagctggcgtcgtcggggctttgcagcctttacgccccatacggcggctcgtgttaccgcgggccgccgtgt +tgtgattgatgaggccccatccctcccaccgcatctgttgttgttgcacatgcagcgggcttcgtctgtcca +tcttcttggtgacccaaatcagatccctgccatagacttcgagcatgccggtctggtccctgcaatacgccc +tgaacttgcacctaccagctggtggcatgttacacatcgttgccctgccgatgtgtgtgagctcatacgtgg +ggcctatccgaaaatccaaaccaccagccgtgtgctgcggtctctgttctggaacgag------cccgccat +cggccagaagctagtttttacacaggcagctaaagctgccaaccctggtgcaatcacagtccatgaagctca +gggcgctacatttacggagaccacagttatagccacggctgatgctaggggccttattcaatcttctcgggc +tcatgctatagtcgcactcacccgccacacagagaagtgcgtcatacttgatgcccctggcctactccgtga +agttggcatatcggacataattgtcaacaacttc------------------------------tttcttgc +tggcg--gggaggtgggccaccatcgtccctctgtaataccccgtggtaaccccgaccagaatcttgagac- +-----gctacaggcttttccgccctcttgtcagattagtgcctatcatcagctagccgaggaacttggccac +cgcccagcccctgtcgctgctgtcttgccccccctgcctgagctcgaacagggtttgttatatatgcctcag +gagctcacggtatctgacagtgtgttgatttttgaactcacggatatagttcactgccgcatggctgcccct +agccagcggaaggccgtcctatcgacgcttgtggggaggtatggccgtaggacgaagttgtacgaagcagct +cattctgacgtccgtgagtccttagctaggtttatccccaccatcggacctgttcaggcgaccacatgtgag +ttatatgaactggttgaggccatggtggaaaagggccaagacggttccgctgtacttgagcttgacctttgc +aaccgtgacgtctcgcgtattacatttttccaaaaagactgcaacaagtttaccaccggggagaccattgct +cacggcaaggtcggccagggtatttcagcttggagcaagaccttttgtgccttgtttggcccgtggttccgt +gctatcgaaaaagaaatactggccctgctcccgcctaacatcttttatggcgacgcatatgaggagtctgtg +tttgctgccgctgtgtctggggcagggtcgtgcatg---gtgtttgaaaatgacttctcggagtttgacagc +acccagaacaatttttccct------------------cggcctagagtgcgtggttatggaagagtgtggc +atgccccagtggctaatccggttgtatcatttggtccggtcggcctggatcctgcaggcgccgaaggagtct +cttaaaggattctggaagaagcattctggtgagcccggcaccctcctctggaacaccgtttggaatatggcg +atcatagcacactgctatgagtttcgcgactttagggttgcagcttttaagggcgatgactcggtggtcctc +tgcagtgactaccgtcagagccgtaatgcggcagccctgattgcaggctgtgggctcaaattaaaggttgat +taccgccctatcggattgtatgctggtgtcgtggtagcccctggtttggggacactacccgatgttgtgcgc +tttgctggccggttgtctgagaagaactggggtcccggaccagagcgggctgagcaattacgcctcgcagtt +tgtgattttcttcgaaggctgacgaatgttgcgcaggtctgtgttgatgttgtatctcgtg-------ttta +tggagttagccccgggctggtacataacctcattggcatgctgcagaccattgctgacggcaaggcccattt +tactgagactgtaaaacctgtacttgaccttacaaattctatcatacagcgggtagaatgaataacatgtt- +t----------------tgtgcattgcccctggg------------atcaccatgcgccctagggctgttct +gctgctgttcctcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------cctgccagccgtctggcc------------gtcgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattcccagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgccgatgtcatttcgcaacccggggctggagctcgccctc +gacagccgccccg---------------ccccctcggctcctcttggcgtgaccagtccct----------- +------gcgcccctccgctgccccccgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgccgtatcaccggcccctgacacagcccctgttcctgatgtcgattcgcgtggcgctatattgcgacggca +gtataacttgtccacgtccccgcttacatcatctgtcgcttcgggcactaatttggttctttatgctgcccc +gctaaaccctctcttacccctccaggatggtactaatactcatattatggccaccgaggcatctaattatgc +tcagtatcgggtcgtccgagccacgatccgctatcggccgttggtgccgaatgccgtcggcggttatgcaat +ctctatctcattctggcctcagacaactactacccctacatctgttgatatgaactctattacctctactga +tgttagaattttggtccaacccggtattgcttctgaactggtcatccctagtgagcgcctccactatcgcaa +ccagggctggcgctccgttgagacatcgggtgtggccgaagaggaggctacttctggtttagtcatgctttg +cattcatggctctcctgttaattcttacactaacaccccctatacgggggcgcttgggcttcttgatttcgc +actagagcttgagtttaggaatttgacacccggaaataccaatacccgcgtgtcccggtatacaagtacagc +ccgtcatcggctgcgccgtggcgctgacggtactgctgagctcaccaccacagcggccacgcgttttatgaa +ggatctgtatttca---ctggcacgaac---ggggttggcgaggttggccgtggcattgccttgacactgtt +taatcttgctgacacgcttctcggtggtttgccgacagaattgatttcgtcggctggggggcagttgttcta +ctcccgccctgtcgtctcagccaatggcgagccgacagtcaaattatatacatctgtagagaatgcgcagca +ggacaagggaattgccatcccacatgacatagatttgggtgactctcgtgtggttatccaagactatgataa +ccagcatgagcaggatcggcccaccccctcgcctgccccgtctcgccctttttcggtccttcgtgctaatga +tgttctgtggctctc-----------------------------tcttactgccgccgagtatgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctcggacactgttacattcgt---taatgtggcc +acaggagctcaggctgtcgcccgctctcttgactggtctaaggtcactttggacggccgccctcttattacc +at-----ccagcagtactctaaaacattttatgttc-tcccgcttcgtgggaagttatccttctgggaggcc +ggcacaaccaag--gccggttacccgtataattataatactactgctagtgatcaaattttgatcgagaatg +cggctggccat------cgtgttgccgt-ctccacttacactactagtctggg--------------tgccg +gccctgtgtccatctc-tgcagtcggtgtactggccccgcattcggctcttgctgttcttgaggacactgtt +gact---------atcctgctcgcg----cccatacttttgatgatttctgtccggagtgtcgcgccc---t +tggcttgcaggggtgcgctttccaatc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattaa-tt----c--cctt--tc------gt +accc-cct--------tc-atag-ctctc---cgc-tt---tt---------------attt-t-------c +ttttttct----gc----------------ggctcgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------aaaaaaaaaaaa------------------ +------------------------------------------------------------------------ +----------- +>MH377722.1/17287/1-7287 |Hepeviridae isolate SW63BD81 polyprotein, ORF3 protein, and capsid protein genes, complete cds +agccttaataaactgatgggcctccaggcagtacca-agtatg-------------t-----gctcgatgc- +---catggaggcccatcagtttattaaggttcctggcattactactgccattgag---caagctgctctggc +tgcggccaactctgccttggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagatcct +tattaatttaatgcaaccccggcagctggttttccgacctgaagtgctctggaaccaccctatccaacgggt +tattcacaatgaattagaacagta---ctgccgggccc-gtgctggtcgttgtcttgaggtcggtgcccatc +cgagatctattaatgacaacccgaatgttttgcatcggtgtttcctacgaccagttgggagggatgttcagc +gttggtactctgctcccacccgtggccctgcagctaattgccgccgctccgctttacgcggcctcccccccg +ttgatcgtacctactgttttgatggattttctcgctgctcgtttgctgcggaaactggtattgccctttatt +ctctgcatgacctctggccggccgatgttgcggaggccatggcccgacacgggatgacacgcctatatgctg +cattacatctc-ccccctgaggtattactaccacctggcacctaccacacaacttcatacctcctgatccac +gacggcgaccgtgccgttgtaacctacgaaggtgatactagtgcaggctacaaccatgatgtctccatactc +cgagcatggatccgcacaactaaaatagtaggcgatcatccgctggtgatagaacgtgtgcgggctattggt +tgccactttgtgctgctgcttactgcagcccctgagccgtcaccaatgccctatgtcccgtatccccggtcg +acagaggtgtatgtccgctctatattcggcccaggc---------gggtccccgtccctgtttccatcagct +t----------gctctacgaaatcca-cattccatgctgtcccggtccacatttgggaccggctcatgctct +ttggcgctacccttgatgatcaggcgttttgctgttcacgccttatgacctatctccgtgggattagctaca +aggtcaccgttggtgccctcgttgccaacgaggggtggaacgcttcgcaggacgctcttaccgctgttatta +ctgcagcttacctgactatctgccatcagcgttacctccgcactcaagctatatctaagggcatgcgccggc +aggaggttgagcatgcccaaaaatttattacaagactttatagctggctgttcgagaaatc---------tg +gccgcgactacattcccggtcgccagctccagttttatgcacagtgccgccgctggttatctgcaggtttcc +accttgatcctagggtgctcgtctttgatgagtccgtgccctgc---cgctgtaggacgtttcttaagag-- +----ggttgcaggtaaattctgctgttttatgaaatggttggggcagga------gtgcacctgttttttgg +----------------aaccagcggagggcctggttggtgaccatggc--------cacgacaacgaagctt +atgagggctctgaggtcgaccaggccgagcttgctcattttgatgtttctgggacctatgccgttcatgggc +gtcaacttgaggccctgtatagggctcttaatatcccacaagacattgccgctcgagcctctcgtttaaccg +ccactgtcgagctcgttgcaggtccagatcgcttggagtgtcgtactgtgctcgggaataagactttccgga +caacggtggttgatggcgcccatctcgaggctaacggccc------------------------cgagcagt +atgtcctttcgttcgatgcctcccgccagtctatgggggccgggtcgcataatcttacctatgagctcaccc +ctgctggcttgcaagtcaagatctcatcc-------aatggcttggactgcactgcaacattcccc---ccg +ggcggcgctcctagcgctgatccgggggaggtagcagccttctgcagtgccctttacaggtataacagattc +acccagcgacactcgcttacaggcggcctgtggttacatcccgagggactgctgggtatcttcccccctttt +tcccccgggcatatttgggagtccgccaaccctttttgcggggaaggaacattgtacacccggacttggtca +acatctggtttctctagtgactttccccccccagaggcagctgctgctgcaccggctgctgcccc----ggg +gttacccc---atcccacaccccctgttagtgacat-----------------ctgggtgtt---------- +---------gccgtcaccc----tctgaagaac--------------tccaggtcgacacgatgcccccccc +tcttg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctcctgagcccgtccaaccgcccagc +ctggccaaacctgag-------------------------------------acccctgtgcgtaagccgtc +aacaccacc--------------------------------------gcttcgccgtacccgtcgcc----- +-------------------tcctttacacctacccggacggtgctaaggtgtacgcagggtcattgtttgag +tcggactgtgattggctggtcaacgcatcgaaccctggccatcgtcctgggggtggcctttgccatgccttt +taccaacgctatcccgagtctt------tctacccaactgagttcattatgcgcgacgg---tctcgccgca +tatactttaactccccggcccattatccatgcagtggcccctgattatcgggtcgagcaaaacccaaagagg +cttgaggcagcatatcgagagacctgttcccgtcgcggtaccgccgcttatccacttctcggctcgggtata +tatcaagtccccgttagcctcagctttgacgcttgggaacgcaatcaccgccctggggacgagctgtacctc +accgaccccgccgctgcc-------------------------------------------------tggtt +tgaggccaataagccaacaca--------------------------------------------------- +------------------------------------------gccggcccttacaataactgaggatacagc +cc------------gcacggctaacctagcactggagatag------------atgctgctacagaggttgg +ccgggcttgt---gccggctgtacagttagacctggggttgtgcattatcaattcactgccggggtcccagg +ttcgggaaagtcgcggtccatacaacaaggggatgtcgatgtggtggttgtccccacccgggagcttcggaa +tagttggcgtcgccgaggtttcgcagcttttacacctcatacggcggcccgtgttaccgctggccgccgtgt +tgtgattgatgaggccccgtcccttccaccgcacttgttgttactgcacatgcagcgggcttcgtcggtaca +tctccttggcgacccaaaccagatccctgccatagacttcgagcacgccggcctcgtccccgcaatacgccc +cgagcttgcgccaaccagctggtggcatgtgactcatcgctgccccgctgatgtgtgcgagcttatacgtgg +ggcttacccaaaaatccagaccactagccgcgtgttgcgatctctattctggaatgag------cccgccat +cggccagaagttggtttttacgcaggccgctaaggctgctaaccctggtgcaatcactgtccacgaggccca +gggcgccacctttacggagaccactgtcagagccacggctgatgctagggggctcatccaatcctctcgagc +tcatgccatagttgcactcacccgccatacagagaaatgcgtcatccttgacgcccccggtctgttacgtga +ggtcggtatatcggatattatcgttaacaatttc------------------------------tttcttgc +tggtg--gggaagtgggccatcatcgcccctctgtgataccccgcggtagccctgaccaaaacctcgcgac- +-----gttacaggcctttccaccttcttgtcagattagtgcctaccatcagctagctgaggaactaggtcat +cgtccagcccctgtcgccgctgtcctgcctcccttgcccgaacttgagcagggcttgttatatatgccccag +gagctcacggtgtccgacagtgtgctggtctttgaacttacggatatagtccactgccggatggccgcccct +agtcagcggaaggccgtcctgtcgacgcttgtgggtaggtacggccgcagaacaaagctgtttgaggcggcc +cattctgacgtccgtgagtccctggctagatttatccccaccattgggcctgttcaggccaccacgtgtgag +ttatatgagctggttgaggccatggtggaaaagggtcaggatggctcggccgtacttgagctcgacctttgc +aatcgtgacgtatcgcgtatcacattctttcagaaagattgtaataagttcaccacaggggagaccattgct +cacggtaaggtcggtcagggcatttcagcttggagtaagaccttttgtgccctgttcggcccgtggttccgt +gctattgaaaaggaaatactggccctgctcccgcctaatatcttttacggcgatgcatatgaggagtctgtg +tttgctgcccctgtttctggggcaggctcatgcatg---gtgtttgagaatgacttctcagagtttgatagc +actcaaaacaatttctctct------------------tggtctcgagtgtgtggttatggaagagtgtggc +atgccccagtggctaatacggttgtaccatttagttcggtcggcctggatcctgcaggcgccgaaggagtct +cttaaaggattctggaagaagcattctggtgagcccggcaccctcctttggaacaccgtttggaatatggcg +atcatagcgcactgctatgaattccgtgactttagggttgccgccttcaagggagatgactctgtggtcctc +tgcagcgactaccgtcaaagccgcaatgcggctgccctaattgcgggctgtgggctcaaactgaaggttgac +tatcgccctattggattgtatgctggtgtcgtggtggcccccggtctggggacgctacccgatgttgtgcgc +tttgccggccgactgtccgagaagaactggggccctgggccggagcgagctgagcagctgcgccttgctgtt +tgtgatttccttcgagggttgacgaatgttgcgcaggtatgtgttgatgttgtgtcccgag-------ttta +tggagttagccctgggctggtacataaccttattggtatgctgcagaccattgctgatggcaaagcccactt +cacagagactgttaaacctgtgcttgacctcacaaattctattatacagcgggaggaatgaataacatgtt- +t----------------tgtgcattgcccctggc------------atcaccatgcgccctagggctgttct +gttgctgtacttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccag------cctgccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattcccagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtttcgcaacccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgtgaccagtccct----------- +------gcgcccctccgctgccccacgccgtcgatctgcccca---------actggggctgcgccgctgac +tgctatatcacccgctcctgatacagcccctgtgcctgatgttgattcgcgcggcgctatactgcggcgaca +gtataatttatccacatccccacttacatcatctgttgcttcgggtaccaatcttgtcctttatgctgcccc +gctaaatcctctgttgccccttcaggatggcactaacacccatatcatggccactgaggcgtccaattatgc +ccagtatcgggttgtccgagctacgatccgttataggccactggtgccaaatgctgttggtggttatgcaat +atctatttcattctggccccaaactactactacccctacgtctgtcgatatgaactctatcacctctactga +tgttaggattctggttcagcctggtattgcttccgagctggtcattcctagtgagcgtctccattatcgcaa +ccagggctggcgttctgtagagacctcaggtgtggctgaagaggaggctacttctggcttggtgatgctttg +tattcatggctcccctgttaattcttacactaataccccttatactggggcgctcggactccttgattttgc +tttagagcttgagtttagaaacctgacacccgggaacactaacactcgtgtctcccggtatacaagcacagc +ccgtcatcggctgcgtcgcggtgctgacggcactgccgagctcaccaccacagcggccacgcgtttcatgaa +agacctgcacttca---ccggaatgaat---ggggtcggtgaggtgggccgcggtattgctctcactctctt +taatcttgctgatacacttcttggtggtttgccgacagaattaatttcgtcggctgggggacagttgttcta +ttcccgccccgtcgtctcagccaatggcgagccgacagtcaagctatatacatctgtagagaatgcgcagca +agataaagggatcgccatcccacatgacatagacctgggtgactctcgtgtggtcatacaggattatgataa +tcagcatgagcaggaccgacccaccccttcacctgccccatctcgccctttttcggttcttcgtgctaatga +tgttttgtggctctc-----------------------------tcttaccgctgccgagtatgac------ +cagactacatatgggtcatccaccaacccgatgtatgtctcggatactgtcacatttgt---caacgtggct +acgggggcccaggctgtcgcccgttctcttgattggtctaaagttaccttggatggccgcccccttattact +gt-----tcagcagtactctaagacattttatgttc-tcccgcttcgaggtaagctgtccttttgggaggcc +gggacgactaag--gctggctacccctataattataatacaaccgccagtgaccagattttgattgaaaacg +cggccggtcac------cgtgttgctat-ttccacctacaccactagtttaag--------------cgccg +gccctgtgtcaatctc-tgcagttggtgtattagccccgcactcggcccttgcagccctcgaggatactatt +gatt---------accctgcccgtg----cccatacttttgatgatttctgcccggagtgtcgcaccc---t +tggcttacaggggtgtgccttccaatc--------cactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaatcaa-tt----t--ccc--ttt------gg +gccc-cct--------tc-atag-ctttt---tgc-tt---t----------------attt-t-------t +tcttttct----gc----------------tgttcgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------aaaaaaaaaaaa------------------ +------------------------------------------------------------------------ +----------- +>MH377723.1/17288/1-7288 |Hepeviridae isolate SW66BD88 polyprotein, ORF3 protein, and capsid protein genes, complete cds +agccttaataaactgatgggcctccaggcagtacca-cgtatg-------------t-----gctcgatgc- +---catggaggcccatcagtttattaaggttcctggcattacaactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagttggttttccgacctgaagtgctctggaatcatcctatccaacgggt +tatccataatgaacttgaacagta---ctgtcgggccc-gggctggtcgctgtctagaggttggggcccacc +caagatccatcaatgacaacccaaatgttctgcaccggtgcttcttacgaccagttgggagagatgttcagc +gctggtactctgctcctacccgcggcccagcggctaactgccgccgttctgccttgcgtggcttcccccctg +ttgatcgtacctattgttttgatggattctcccgctgctcatttgccgcagaaactggggttgctctttatt +ctctgcatgacctctggccggccgatgttgcggaggctatggcccgacacgggatgacacgcttgtatgctg +cactacatctc-ccccctgaagtactactaccacctggtacttaccatacaacttcataccttttgattcac +gacggggatcgtgctgttgtgacctatgaaggtgatactagtgcaggctacaaccatgatgtctccatactc +cgtgcatggattcgcacaactaagatagtcggcgatcatccgctggtgatagagcgtgtgcgggctattggc +tgccattttgtgctgctgctcactgcagcccctgagccgtcaccaatgccttatgttccatacccccggtcg +acagaggtgtatgtccgctctatatttggtcctggc---------gggtccccatccctattcccatcagct +t----------gctctacgaaatcca-catttcacgctgtcccggttcatatttgggaccggctcatgctct +ttggcgctactctggatgatcaggcgttttgctgttcacggcttatgacctacctccgcgggattagttaca +aggtcactgttggcgcccttgtcgctaatgagggatggaatgcttcggaggacgctcttaccgctgttatta +ctgcagcgtatttgaccatttgccatcagcgttacctccgtactcaagctatatccaagggtatgcgccggc +aggaggttgagcatgcccaaaaattcattacaaggctttatagttggctgttcgagaagtc---------tg +gccgtgactacatccccggtcgccagctccagttttatgcacagtgccgccgttggttatcggcaggcttcc +atcttgacccaagggtgcttgtttttgatgagtctgtgccctgc---cgttgtaggacatttcttaagaa-- +----ggttgtgggtaagttctgctgttttatgaagtggttgggacagga------gtgcacctgcttcttgg +----------------aaccagcagagggtctagttggcgaccacggc--------cacgataatgaagcct +atgagggctctgaagtcgatcaggccgagcccgcccaactcgatgtttctgggacttatgccgtccacggct +gccaactggaggccctgtatagggcgcttaatatcccgcatgacatcgctgcccgagcctcccgtttgactg +ccaccgtcgaactcgttgcaggcccagaccgcttggagtgccgcactgtgctcgggaataagactttccgga +cgacggtggttgatggcgcccatcttgaggcgaacggccc------------------------cgagcagt +acgtcctttcgtttgacgcctctcgccagtctatgggggccggtccgcacagtctctcctatgagctcactc +ctgctggtttgcaggtcaagatttcatct-------aatggcctagattgcactgcaacattcccc---ccg +ggcggcgcccctagcgctgccccgggggaggtagcggccttttgcagtgcccttcacaggtataacaggttc +actcagcgccattcgcttataggcggcttgtggctgcaccctgaggggttgttgggtatcttcccccctttt +tctcccgggcacctttgggagtccgctaaccctttttgtggggagggaaccttgtacacccggacatggtca +acatctggtttttctagtgacttttccccccctgaggcagccgttgcagtgccggctgctactcc----ggg +gttacgcc---gccctacacctcctgctagcgacat-----------------ttgggtgtt---------- +---------accgccacct----tctgaagaat--------------ttcaggttgatacaacttccgcccc +ccttg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcccgctcaaccatctagc +cctgctgagccaaaa-------------------------------------gctcccgtgcgtaagccgcc +aacaccacc--------------------------------------atccccgcgtacccgccgcc----- +-------------------ttctttacacctatcctgatggggcaaaggtgtacgcggggtcactgtttgag +tctgactgtgattggctggtcaatgcgtcgaatcccggccatcgtcctggaggcggcctttgccatgccttt +taccagcgctaccctgagtcgt------tccatccaaccgagttcattatgcgcgatgg---tctcgccgca +tatactctgactccccgccctatcatccatgcggtggcccctgattatagggtcgagcagaatccaaagagg +ctcgaggcagcgtatcgggagacttgctcccgccgtggcactgccgcttacccacttttgggctcgggcata +tatcaggtccctgttggtcttagttttgatgcctgggagcggaatcatcgccccggggatgagctttacctg +actgatcccgccgccact-------------------------------------------------tggtt +cgaggctaataagccgacaca--------------------------------------------------- +------------------------------------------gccggctcttacaataacagaggacacagc +tc------------gcacggctaacttagcattggagattg------------atgctgctacagaggttgg +ccgtgcttgt---gccggctgcacagtcagccccgggatcgtgcattatcaattcactgctggagttccagg +ctcaggtaaatcaagatctatacagcagggggatgtggacgtagtggttgtccccacccgggagctccggaa +tagctggcgtcgtcggggttttgcagcttttacacctcatacggcggcccgtgtcaccacaggccgtcgtgt +tgtgattgacgaggccccatccctcccaccgcatttgttgctactacacatgcagcgggcctcgtcggtcca +ccttctcggcgacccaaaccagatcccctgcatagacttcgagcatgccggcctggtccccgctatacgccc +tgagctcgcgcccaccagttggtggcatgtcacccatcgctgccctgctgacgtgtgcgagcttatacgcgg +ggcttatcccaaaatccaaaccactagccgcgtgctacggtctctattctggaatgag------cctgccat +tggccagaagttagttttcacccaggcagctaaagctgctaaccctggtgcaatcactgtccacgaggccca +gggcgccaccttcacggaaactacaatcatcgccacggctgatgctagggggctcatccaatcttctcgagc +tcacgccatagtcgcacttacccgccacacagagaagtgcgttattcttgacgcccccggcttgttacgtga +ggttggtatatcggatgtgattgttaacaatttt------------------------------ttcctcgc +cggcg--gggaggtgggtcaccatcgcccctctgtgatacctcgcggtaatcctgaccaaaacctcgcgac- +-----actacaggcctttccaccctcctgccagattagtgcctatcaccagttagctgaggaacttggccac +cgcccagccctcgtcgccgctgtcttgcccccttgccctgaacttgaacaaggcttgttatatatgccgcag +gagcttacggtgtctgatagcgtgctggtctttgaactcacggacatagttcactgccggatggctgccccc +agccagcggaaggccgtcctatcgacgctcgtgggtaggtacggccgtcggacgaagctgtatgaagcagct +cactctgacgtccgtgagtccctggctagattcatccccaccatcgggcccgttcaggctactacgtgtgag +ttatatgagctggttgaggccatggtggagaaaggtcaggatggctctgccgtgcttgagctcgacctctgc +aatcgtgatgtatcgcgtatcacatttttccagaaagattgtaacaaattcaccacaggggagaccattgcc +cacggtaaggtcggccagggcatctcggcttggagtaagaccttctgtgccctatttggtccgtggtttcgt +gctattgaaaaagaaatactagccctgcttccgcctaatattttctacggtgacgcatatgaggagtctgtg +tttgctgcccctgcgtcaggggcaggttcaagcatg---gtatttgagaatgatttttcagagtttgatagc +acccaaaataacttctccct------------------tggtctcgagtgtgtggttatggaagagtgtggc +atgccccagtggctaatccggttgtaccatttggttcggtcggcctggatcctacaggcaccgaaggagtct +cttaagggattttggaagaagcattctggtgagccaggcaccctcctttggaacactgtttggaatatggcg +atcatagcacactgctatgaatttcgtgattttagggttgccgctttcaagggagatgattccgtggtcctc +tgtagcgactaccgtcagagccgcaatgcagcggccctgattgcaggttgcgggctcaaattgaaggttgat +tatcgccctatcggattgtatgctggcgtcgtggtagcccctggtttggggacactacccgatgttgtgcgc +tttgctggccggttgtctgagaagaactggggtcctgggccggagcgggctgagcagttgcgcctagctgtt +tgtgacttccttcgagggttaacgaatgttgcgcaggtgtgtgtcgatgttgtatcccgag-------ttta +tggagttagccctgggctggtacataaccttattggcatgttgcaaaccatagctgatggcaaagcccattt +tacagagactgttaaacctgtgcttgacctcacgaattctattatacagcgggtagaatgaataacatgtt- +t----------------tgtgcattgcccctggg------------atcaccatgcgccctagggctgttct +gttgctgttcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattcccagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgccgatgttgtatcgcaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcgtctcctcttggcgtgaccagtccct----------- +------gcgcccctccgctgtcccacgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgccatatcacctgctcctgatacagctcccgtacctgatgttgactcgcgcggcgccatattgcgacgcca +gtacaatttatccacatccccgctcacatcatctgttgcttcgggtactaatctggttctttatgctgcccc +gctaaaccctttgttgccccttcaggatggcactaacacccacatcatggccactgaggcatctaattatgc +ccagtatcgggttgtccgagctacgattcgttacaggccattggtgccgaatgctgtcggcggctatgcaat +atccatctcattctggcctcagactactactacccctacgtctgttgatatgaactctattacttccactga +tgttaggattctagttcagcccggtattgcttctgagttggttatccccagtgagcgcctccattatcgtaa +ccagggttggcgctctgtggagacctcgggtgtggctgaagaggaggctacttccggtttggtaatgctttg +catccagggctctcccgttaattcctacactaataccccttataccggggcgcttgggctccttgattttgc +tttagagcttgagtttaggaatctgacacccgggaacactaacacccgtgtgtcccggtatacaagtacagc +ccgtcatcggctgcgccgcggtgctgatggtaccgccgaactcaccaccacagcggccacgcgcttcatgaa +ggacctgcacttca---ccggtacgaat---ggggtcggtgaggtcggtcgtggtattgctctcacactctt +taatcttgctgacacgcttctcggtggtttgccgacagaattaatttcgtcggctgggggacagttatttta +ctcccgccccgtcgtctcggccaatggcgagccgactgtcaagttatacacatctgttgagaatgcgcagca +ggataaagggatcgctattccacatgacatagatctgggtgactcccgtgtggtcatccaagactatgacaa +ccagcatgagcaagaccgacccaccccctcgcctgccccttctcgccctttttcggtgcttcgcgctaatga +tgttctttggctttc-----------------------------tcttactgccgccgagtacgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctcggatactgtcacatttgt---caacgtggct +acaggagcccaggctgtcgcccgttccctcgactggtctaaagttactctggacggccgcccccttactacc +at-----ccagcagtactctaaaacattttatgttc-tcccgcttcgcgggaagttatctttctgggaggcc +gggacgactaag--gccggttatccctataattacaacacaactgctagtgatcagattctgattgaaaatg +cagctggtcat------cgtgttgctat-ttccacgtataccaccagcttggg--------------tgctg +gccctgtgtctgtctc-tgcagttggtgttttagccccacattcggcccttgcagtccttgaagacactatt +gact---------accctgcccgtg----cccacacttttgatgatttttgcccggagtgtcgcgctc---t +tggtttgcaggggtgtgccttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaatcaa-tt----t--cctt---t------gt +gccc-cct--------tc-atag-ctctt----tg-ct---t----------------attt-c-------t +ttttttct----gc----------------ggctcgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------aaaaaaaaaaaaaaa--------------- +------------------------------------------------------------------------ +----------- +>MH377724.1/17291/1-7291 |Hepeviridae isolate SW2BD75 polyprotein, ORF3 protein, and capsid protein genes, complete cds +agccttaataaactgatgggcctccaggcagtacca-cgcatg-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggctaactccgccttggcgaatgctgtggtggtccggccgttcctgtcccgtactcagactgatattct +cattaatctgatgcaacctcggcagctcgttttccgtcctgaagttttgtggaatcacccgatccagcgggt +tatacacaatgagcttgagcagta---ttgccgtgctc-gcgctggtcgctgcctggaggtcggggctcatc +caagatctattaatgataaccctaatgttttgcaccggtgtttcctccgcccggttgggagggatgtacagc +gctggtattctgccccgacacgcggcccagcggctaattgccgtcgctctgcactacgtggcctgccccccg +tcgaccgcacctactgtttcgatgggttctcccgctgtgcttttgccgctgagactggaattgccttatact +cattacatgacctctggcctgctgatgttgcggaggccatggctcgccatgggatgacacgtctgtatgcag +tcctccatttg-ccccctgaggttctgttaccacctggcacttaccataccacctcttatttgcttatccac +gacggcgatcgcgccgtcgtaacttatgaaggggataccagtgcgggctacaaccatgatgtgtccattctc +cgcgcatggatccgcacaaccaagatagttggtgatcatccgttggttatagagagggtccgcgctattggc +tgccatttcgtactacttctcactgctgcccccgaaccatcacctatgccttatgtcccatacccccgttca +acagaggtgtatgtcaggtccatatttggccccggc---------gggtcgccatctctgttcccatcagcc +t----------gctccaccaaatcca-catttcacgctgtcccagtccatatctgggaccggctcatgctct +tcggcgccaccttagacgaccaagccttttgttgctcgcggcttatgacctatctccgcgggattagttata +aggtcactgtcggtgcacttgtcgccaacgaaggctggaacgcctcagaggatgcactcaccgctgtgatta +ctgcagcatacttgactatctgtcaccagcgctacctccgaacccaggctatctctaagggtatgcgtcggc +tagaagttgagcacgcccagaagtttattactaggctttacagctggctgtttgaaaagtc---------cg +gtcgtgattacatccccggccgtcaacttcagttttacgcgcagtgccgtcgctggctttccgccggcttcc +acctagaccccagagttcttgtttttgatgaggcggtcccctgc---cgctgcaggagctttctgaagaa-- +----ggttgctggcaagttctgttgctttatgaagtggctagggcagga------gtgcacctgctttctag +----------------agccagctgagggcttgattggtgactgtggc--------catgataacgaggcct +acgagggttccgaagtagaccctgctgagcctgctcaccttgatgtctctgggacctatgcagttcatggcc +gccaacttgaggctctatacagggcgctcaacatcccacatgacattgcagcccgtgcgtcacgtttgacag +ccactgtggagcttaccgctagcccaggtcgcctcgaatgccgtacagtgcttggaaataagatcttccgca +cattagtaacagatggtgcccacctcgaggttaacggccc------------------------tgagcagt +atgttttaacatttgatgactcccgccaagctatgggggctgggccccatagcctcacatacgagctcaccc +ctgccggcctgcaggttaagacatcttct-------aatggcctagattgcaccgctgtcttcccc---cct +ggcggggcgcctagtgccgaaccaggtgaggttgcagccttctgcagtgctttatacagatacaacagattt +acccagcgccattcgctaaccggtgggctgtggctgcaccctgaggggcttctgggcctgttcccccctttc +tcccctgggcatgtttgggagtccgcgaatcccttttgcggtgagggtactctttatacccgaacttggtcc +acatctggtttttctagtgatttttccccccctgaggcggcttttgccgtttcagctcttgacgg----ggg +gccacctccaggtaccccctcttctgctagtggcgt-----------------ctgggcgct---------- +---------cccgccaccc----tctgaggggt--------------cggcggttgccccgccgcttacagc +ctcggc------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------------------------tagtaagcctacttgcccccctcgc +cccgtcacgcctaag-------------------------------------ccccccgttcgtaagtcgtc +tccttcgcc--------------------------------------gccggcccgcacccgccggc----- +-------------------tcctttacacttacccggatggggctaaggtctatgcaggctctttgtttgag +tcagactgtgattggctggttaacgcgtccaaccctggtcaccgccccggcggcggtctttgtcatgctttt +taccagcgcttcccagagtcgt------tctacccgaccgactttgtcatgcgtgaagg---cctcgccgcg +tatactctgaccccacgcccgattattcatgctgtggctcctgattatagggttgagcagaaccccaagagg +ttggaggcggcgtatcgcgagacttgttcccgcctcggtacagccgcttatccgctattggggtcggggatt +taccaagtccctgttggtttaagttttgacgcctgggagcgtaaccaccgcccgggcgatgagctctacctt +accgagcctgctgccgcg-------------------------------------------------tggtt +tgaggcaaataagccaactca--------------------------------------------------- +------------------------------------------accagctctaacaataacagaggacacagg +ct------------tatccgccaaccccccgcttgagattg------------actctgccactgaggtggg +tcgtgcctgc---accggctgttctgtcacccctggtgtggtccactatcagtttactgccggggtgcctgg +ctctgggaagcgctggtctatacagggaagcgctgggaacgtagtggttgtccccacccgggagctccggaa +tagctggcgtcgtcggggctttgcagcttttacacctcatacggcggcccgtgtcaccacaggccgtcgtgt +tgtgattgatgaggcaccctccctcccaccgcatctgctgctgcttcatatgcagcgggcttcgtcagttca +tcttcttggcgatcccaaccagattcccgccattgactttgagcatgcaggcttggtgccagcgatccgcac +tgaacttgccccaactagttggtggcacgttacacaccgttgtcctgccgacgtgtgtgaactcatacgcgg +ggcctatcccaagatccaaactactagccgtgtgatgcgatctttgttttggaatgag------cctgcagt +gggccagaagtttgttttcacgcaggctgctaaggcggccaaccccggcgcaatcaccgttcatgaggccca +gggtgccacatttacagagactaccatcatagccacggctgatgctaggggccttatccaatcctcccgtgc +acatgcaatcgttgcacttacccgccatacagaaaaatgtgttatcttggacgcccccggcctactgcgtga +ggtcggtatctctgatataattgttaacaatttc------------------------------ttcctggc +aggcg--gtgaagttggccaccaccgcccttccattatacctcggggtgacccagatcggaatttagacac- +-----cttgcaggcattccctccatcttgccaaattagtgcctatcatcagctagctgaagagctgggtcac +cggcctgtcccagtggctgctgtgttgccgccttgccctgagctcgagcagggcacactttacatgccgcaa +gagctcacagtctccgatagtgttttggtctttgagctcacggacgtagttcactgtcgaatggcggcccct +agtcaacggaaggccgtcctttcaacgctcgtcggcagatacggccgccgaacgaagctttatgaggcggct +cattctgatgtccgcgagtctttggggaggtttatccctactatcggaccagttcaggccaccacatgtgag +ttgtatgagttagtggaggccatggttgagaagggccaggacggttccgctgtgttagagctcgacctctgt +agccgtgatgtctcgcgtatcacattcttccagaaggattgtaataagtttacaacaggtgagactatcgcc +catggcaaggtgggccagggcatctcggcctggagcaaaaccttttgtgctctgtttggaccgtggttccgt +gccattgaaaaggagatcttagccctactcccacctaatatcttctatggtgatgcttttgaagagtcagtg +ttctctgcagccatctctggggcaggctctagtatg---gtctttgagaatgatttctctgagtttgatagc +acccaaaacaatttctccct------------------tggtctcgagtgtgtcattatggaagagtgtggc +atgccccagtggcttattcggctataccatctagttaggtcggcttggaccctgcaagctccgaaggaatcc +ctgaaaggcttttggaagaagcactctggcgagcctggtacactcctttggaacactgtctggaatatggcg +attatagcgcattgctacgaatttcgtgatctgagagtggcagcgtttaaaggggatgactcagtggtcctt +tgtagtgactaccgccagagccgcaatgcggctgccttgattgccggctgtgggttaaagttgaaagttgac +taccgccccatagggttgtacgctggtgtcgtggtggccccaggtctcggggcactccctgatgtcgtccgg +ttcgccggccggttatctgagaagaactggggtccgggtcctgagcgcgccgaacagttgcgtttggcagtt +tgtgacttccttcgaaggttgacgaatgtcgcgcaggtctgtgttgatgttgtgtcccgtg-------ttta +tggagttagtcctgggttggtacataaccttattggcatgctacagactatagccgatgggaaggctcattt +taccgagactgttaaacctgtactggaccttacaaattctatcatacagaggttggaatgaataacatgtt- +t----------------tgtgcattgcccctggg------------atcaccatgtgccctcgggctgttct +gttgctgttcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gtcgtcgtgggcg-gcgcagcggcagtgc +cggcggtg-gtttctggggtgacagg--gttgattcccagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgctgccgacgtcgtaccacaacccggggctggagctcgcccta +gacagccaccccg---------------tccccttggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctgcccca---------gctggggctgcgccgttaac +tgctacctcccccgcgcctgacacggctccagtccctgacgttgattcccgcggtgctattctgcgccgcca +gtataatttgtctacttcacctctgacttcctctgttgcttctggtactaatcttgtgctgtatgctgcccc +actcaaccctcttctacctctccaggatggcaccaatactcacattatggcgactgaggcgtctaattacgc +ccaataccgggttgtccgggctacaatccgttatcgccctttggtgccgaatgctgtcggtggctatgcaat +ttctatctccttttggccccaaaccacaactacccctacctctgttgatatgaattctattacctctacaga +ggttaggattttggtccaacctggtatagcttctgagttggttatcccaagcgagcgcctccattatcgcaa +tcagggttggcgctctgttgagacctcgggtgtggccgaagaggaagcaacatcgggtctggtcatgctttg +tattcatggctctcctgttaactcctatactaatacgccctatactggggcattagggctccttgattttgc +gcttgagcttgaatttaggaatctgacccccgggaacacaaatacccgtgtgtcccggtataccagcacggc +tcgtcaccgtcttcgtcgtggtgccgatgggactgccgagctcacgactactgcggccacacgcttcatgaa +ggacctgcatttca---ccgggacaaat---ggcgttggtgaggtgggccgtggcataggcctaactttatt +caatctcgctgatacacttctcggcggtttgccgacagaattgatttcgtcggccggaggtcagctctttta +ctcccgtccagtcgtctcagccaatggcgagccgactgttaaattgtacacctccgtcgagaatgcccagca +ggacaagggtattgccataccacatgatatagatctaggagactcccgtgtggttatccaggattatgacaa +ccaacatgagcaggataggcctaccccttcgccggccccgtcccgccccttctcggtcctccgtgctaatga +tgttttgtggctctc-----------------------------tctcactgctgctgagtatgac------ +caaactacctatggctcgtccaccaaccccatgtatgtttcagatactgttacttttgt---taatgttgct +acgggagctcaggctgttgcccgctcccttgattggtctaaggtcactttggatggtcgacctcttactacc +at-----tcagcagtattccaagacattctatgttc-tcccactccgcgggaagctctctttttgggaggct +ggcaccactaag--gccgggtatccttataattataacaccactgctagtgaccagattttgatagagaatg +caggcggccat------cgtgttgctat-atctacttatactactagccttgg--------------tgctg +gcccagtctctgtttc-tgcggtcggcgttcttgcccccccgtctgctttagccgtgcttgaggatactatt +gatt---------accctgcccgcg----cccatacttttgatgatttttgccctgagtgccgtaatc---t +tggcctacagggctgtgctttccaatc--------tactattgctgaacttcagcgcct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattaa-ttt---c--cttt----------gt +gccc-cct--------tc-atag-ct-ct----tt-tc-ttt----------------tatt-t-------c +ttttttct----gcg----------------gctcgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------aaaaaaaaaaaaaa---------------- +------------------------------------------------------------------------ +----------- +>MH377725.1/17288/1-7288 |Hepeviridae isolate SW22BD84 polyprotein, ORF3 protein, and capsid protein genes, complete cds +agccttaataaactgatgggcctccaggcagtacca-cgcatg-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttctatcccgtgtacagactgatatcct +cattaacctgatgcaacctcggcagcttgttttccgacctgaggtcctctggaaccacccgatccagcgagt +catacataacgagctagagcaata---ctgccgggctc-gcgctggccgctgccttgaggtcggtgcccatc +cgagatctattaatgacaatcctaatgttttgcaccggtgtttcctccgtccggtcgggagagatgtccagc +gttggtattccgccccaacccgtggtccagcggccaattgccgccgttctgcgctacgtggtttaccccccg +tcgatcgcacatattgcttcgacgggttctcccgctgtgcttttgctgccgagaccgggattgctttatatt +cattgcatgacctttggccttcggatgttgcagaggctatggcccgtcatgggatgacgcgcttgtacgctg +tcctccatcta-ccccctgaggtattgttaccacctggcacctaccacacaacttcttatctcctgatccac +gacggcgaccgcgccgtcgtaacctatgagggggatactagtgcgggctataatcacgatgtgtctatactt +cgtgcttggattcgcaccactaagatagttggtgatcacccactggtaatcgagagggtccgcgccattggc +tgccatttcgttctgcttctcactgcagcccccgagccgtctcctatgccctatgttccgtacccccgctcg +acggaggtgtatgtcagatccatattcggccccggc---------gggtcgccctctctctttccatcagcc +t----------gctctaccaagtcca-catttcacgccgtcccggtccatatatgggaccggcttatgcttt +ttggtgccaccttagatgaccaggccttctgctgttcgcggcttatgacctacctccgcgggatcagctata +aagtgactgtcggcgcgcttgttgccaacgagggctggaatgcctcggaggatgcgcttaccgctgtgatca +ctgcagcgtacttgactatttgtcatcaacgctacctccggacccaggctatctccaaaggcatgcgccggc +tagaggttgagcacgctcagaaatttatcacaaggttatatagctggttgttcgagaagtc---------ag +gccgtgattacatccctggccgccagcttcagttctacgcacagtgccgccgttggctctcggctggctttc +acttggaccctagagttcttgtttttgatgaggcggtcccatgc---cgctgccggagttttttaaagaa-- +----ggccgccggcaaattttgctgttttatgaaatggctgggtcaaga------gtgtacttgttttctgg +----------------agccagcggagggtctggttggcgactgtggc--------catgacaatgaggcct +atgaggggtccgaggtggaccctgccgagcctgcccacctagacatctctgggacctatgcggtccacggcc +gccagcttgaggccctgtatagggcgcttaacatcccacatgacattgcagccctcgcgtcccgcttaactg +ccactgttgagctagctgctagcccagatcgcctagaatgccgtacagtgcttggaaataagatcttccgca +catcggtagttgatggtgctcaccttgaggctaacggccc------------------------cgagcaac +atgttctttcgtttgacgcctctcgccaatctatgggggccgggtcgcacaaccttacctacgagcttaccc +ctgctggcttgcaagttaagatttcatct-------aacggcttagattgcactgcaacattcccc---ccg +ggcggcgcccccagcgccgcgccgggggaggtggccgccttctgcagcgccctttataggtataatcggttc +acccagcggcactcgcttacgggtggcctgtggttgcaccctgaggggttgctgggcattttcccccctttt +tctcccggacatgtttgggagtccgccaaccccttttgcggggagggaactttgtatactcgtacttggcct +acatctggtttttctagtgactttgctcccccggaggcagctgtccctgcaccagctgctactcc----ggg +gctatctc---gtcccacaccccccgttagtgacat-----------------ctgggtgtt---------- +---------gccgtcaccc----tctgaagaac--------------tccaggtcgacacgatgcccgcccc +tcttg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctcctgagctagatccgctgccgagc +cccgctacatccaac-------------------------------------gcgcccgctcgtaagccatc +cccaccgcc--------------------------------------accggctcgtacccgccggc----- +-------------------tcctctatacttacccggatggagctaaggtctatgcgggctctttgtttgag +tcagactgtgattggctggttaatgcatctaaccctggccaccgccctggcggtggtctctgtcatgcattt +taccagcgtttcccggagtcgt------tccacccgaccgactttgtcatgcgcgaggg---tctcgccgca +tataccctatgccctcgtccaatcatccatgctgtggcccctgattacagggttgagcagaaccccaagaga +ctagaggcagcataccgcgaaacctgttcccgcctcggcacagctgcctacccgctgctggggtccgggatc +taccaagtccctgtaagtttaagtttcgacgcctgggagcgtaaccaccgcccgggcgatgaactttacctc +accgaaccggccgccgcc-------------------------------------------------tggtt +tgaggctaataagccagccca--------------------------------------------------- +------------------------------------------gccggccttaacaatcactgaggacaccgc +cc------------gtacggctaaccttgctcttgagattg------------acgctgccactgaggttgg +ccgtgcttgt---gctggttgtactgttaaccccggagtcgttcattatcagtttactgccggggttcccgg +ttctgggaagtctaggtccatacagcagggggatgttgatgttgtagttgtgccgacccgcgagctccgtaa +cagctggcggcgtcgcggctttgccgcttttacaccacacacagcagctcgtgttactgctggccggcgtgt +tgtgatagatgaggcaccttcgctcccgccgcatttgctgttgctccacatgcagcgggcctcatcggttca +ccttctcggtgaccccaaccagatccctgccattgactttgaacacgccggtctggtcccggcaatccgccc +tgagcttgccccgacgagctggtggcatgtcacccaccgctgccccgccgatgtttgtgagctcatacgtgg +ggcttacccgaagatccaaacgaccagccgtgtgctgcggtctttgttttggaatgag------cccgcggt +cggccagaagttggttttcacgcaggctgctaaagcggctaaccctggcgcaatcactgtccatgaagccca +gggcgccacatttacagagaccacaattatagccacggccgatgctagaggtcttattcaatcttcccgtgc +acatgccatcgttgcgctcactcgccacacagaaaaatgtgtcattctggatgcccctggcctactgcgtga +agttggtatttctgacataattgttaataatttt------------------------------tttctggc +cggtg--gtgaagtgggccaccatcgcccttccattataccccgcggtaacccggaccagaacttggatac- +-----cttacgagcgtttcctccatcttgccagattagtgcttaccatcagctggctgaggagctgggccat +cggccggccccagtggcctccgtcctgcccccttgccctgagcttgagcagggcttactctacatgccacag +gagcttacagtctccgatagtgtattggtctttgaactcacggacatagtccactgccgtatggctgcccct +agtcagcgtaaggcagtcctctcaacgctcgtcggcaggtacggtcgccgaacgaagctgtatgaagcggct +cattctgatgtccgtgagtccctggggaggttcatccctactatcggaccagtccaagccaccacatgtgag +ctgtatgagttggttgaagctatggtggagaagggccaggacggctccgctgtgcttgagcttgacctttgc +agccgtgatgtctcgcggattacatttttccagaaggactgtaataagtttacaacaggtgagaccattgcc +catggtaaggtgggccagggcatttcggcttggagtaagaccttctgtgccttatttggcccgtggtttcgc +gctattgagaaagagatcttagctttgctcccgcccaacatattttacggcgacgcctatgaagaatcagtg +ttctctgcggccatttctggagctggctccagtatg---gtctttgaaaatgacttttctgagtttgatagt +acccagaacaacttttccct------------------tggtcttgagtgtgtcattatggaagagtgtggc +atgccccagtggcttatccgattgtatcatttggttagatcggcctggaccctgcaagccccgaaagagtct +ctgaaaggtttttggaagaaacactctggcgaacctggcacccttctctggaatactgtctggaacatggcg +atcatagcgcattgctatgagttccgtgacctgagagtggcagcctttaagggggatgactcagtggttctt +tgcagtgactatcgccagagccgcaatgcggccactctgatagccggttgcgggctgaaactaaaggttgat +taccgtcctataggtctgtatgccggcgttgtagtggctccgggcctcggggcactccccgacgtcgtccgg +ttcgccggtcgattgtctgagaagaattggggcccgggccccgagcgcgccgaacagttgcgtttagcagtt +tgtgattttcttcgaggactgacgaatgttgcgcaggtttgtgttgacgttgtgtcccgtg-------tcta +tggggttagccctggattagtacataaccttattggcatgctacagactattgctgatggaaaggcccactt +taccgaaactgttaagcctgtactggatcttaccaattctatcatacagaggttggaatgaataacatgtt- +t----------------tgtgcattgcccctggg------------atcgccatgtgccctagggttgttct +gttgttgctcctcttgtttctgcctatgctgcccacgc---------------------------------- +-caccgg------cctgccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaatccggggctggagctcgccctc +gacagccggcccg---------------cccccttggctcctcttggcgcgaccagtccca----------- +------gcgcccccccgccaccccccgtcgtcaatctacccca---------actggggctgcgccgctaac +cgctgtttcacctgcgcctgacacggccccggtccctgatgttgactctcgcggtgctatcttgcgccgtca +gtataatttgtccacctctcctttgacctcatctgtcgcctctggaaccaaccttgttctgtatgccgcccc +acttaatcccctcctgcccctccaagacggcactaacactcatatcatggcgaccgaggcgtccaattatgc +ccagtaccgagttgttcgggccacaatccgctatcgtcccttggtgccgaatgccgttggtggttatgcaat +atctatttctttctggcctcagaccacaactacccctacctctgttgatatgaattctattacttctactga +tgtcaggattttagtccagcctggcatagcctctgagttggtcatcccgagtgagcgccttcattaccgcaa +ccaaggttggcgctctgttgagacctcgggcgtggccgaggaagaggcgacatcaggcttagttatgctctg +tattcatggctcccctgtcaattcttacactaatacgccctatactggggcgttagggcttcttgattttgc +actcgagctcgaattcagaaatttgacccctgggaacactaacacccgtgtgtcccgttatactagtacggc +tcgacaccgtttgcgccgtggtgccgacggtacggccgagcttacaaccactgcagccacacgttttatgaa +ggatctgcatttca---ccgggacgaat---ggtgtaggtgaggtgggccgcggtatagctctgacgttatt +taatcttgctgacacacttctcggcggtttgccgacagaattgatttcgtcggctggaggtcaattatttta +ctcccgtccagttgtctcagccaatggcgagccgactgtcaagttatacacctccgtcgagaatgcacagca +ggataagggcattgctataccacacgatatagatctgggggattcccgtgtggttattcaagactatgacaa +ccagcatgaacaggaccggcccaccccttcgccggccccgtcccgccctttttcggtcctccgggccaatga +tgtcttgtggctctc-----------------------------cctgactgcagccgaatatgac------ +cagaccacttatggctcgtccaccaacccgatgtatgtctcggatactgtcacatttgt---caacgtggct +acaggagcccaggctgtcgcccgttccctcgactggtctaaagttactctggacggccgcccccttactacc +at-----ccagcagtactctaaaacattttatgttc-tcccgcttcgcgggaagttatctttctgggaggcc +gggacgactaag--gccggttatccctataattacaacacaactgctagtgatcagattctgattgaaaatg +cagctggtcat------cgtgttgctat-ttccacgtataccaccagcctggg--------------tgctg +gccccgtctctgtttc-tgcagttggcgttcttgccccgcactctgctttagttatgcttgaggatactgtt +gatt---------atcctgctcgtg----cccacacttttgatgatttctgccctgagtgccgtaacc---t +cggcctacagggctgtgctttccaatc--------cactattgctgagcttcagcgcct------------- +--------taaaatgaaggtaggtaaaacccgggagccttaattaa-tt-----t-cct--gct------gt +gccc-cct--------tc-taag-ctctt----gc-tt-tatt--------------------t-------c +ttttttct----gcg----------------tcccgggctccctg---------------------gaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------aaaaaaaaaaaaaaa--------------- +------------------------------------------------------------------------ +----------- +>MH377727.1/17288/1-7288 |Hepeviridae isolate SW652916 polyprotein, ORF3 protein, and capsid protein genes, complete cds +agccttaataaactgatgggcctccaggcaagacca-cgtatg-------------t-----gctcgatgc- +---catggaggcccatcagtttattaaggttcctggcattactactgccattgag---caagctgctctgac +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagttggttttccgacctgaggtgctctggaaccatcctatccaacgggt +tatccataacgaactagaacaata---ctgtcgggccc-gcgctggccgctgccttgaggtcggtgcccatc +cgagatctattaatgacaacccaaatgttctgcaccggtgcttcctacgaccagctgggagagatgtccagc +gatggtactctgctcctacccgcggccctgcggctaattgccgccgttctgctttgcgtggcctcccccccg +ttgatcgtacttattgttttgatggattctcccgctgctcatttgccgcagaaactggggttgccctctatt +ctctgcatgacctctggccggccgatgttgcggaggctatggcccgacacgggatgacacgcctgtatgctg +cactacatccc-ccccctgcagtactactaccacccggtacttaccatacaacttcataccttctgattcac +gacggtgatcgtgctgctgtaacttatgaaggtgatactagtgcaggctacaaccacgatgtctccatactt +cgtgcatggatccgcacaactaagatagtcggcgaccatccgctggtgatagagcgtgtgcgggctattggc +tgccattttgtgctactgcttactgcagcccctgagccgtcaccaatgccttatgtcccatatccccggtcg +acagaggtgtatgtccgctctatattcggccctggc---------gggtccccatccctatttccatcagct +t----------gctctacgaaatcta-cgtttcacgctgtcccggttcatatttgggaccggctcatgcttt +ttggtgctactctggatgatcaggcgttttgctgttcacggcttatgacctatcttcgcgggattagttaca +aggtcactgttggcacccttgtcgctaatgaggggtggaatgcttcgcaggacgctcttaccgctgttatta +ctgcagcgtatttgaccatctgccatcagcgttacctccgtactcaagctatatccaagggtatgcgccggc +aggaggttgagcatgcccaaaaattcattacaagactctatagttggctgttcgagaagtc---------cg +gccgtgattatatccccggtcgccagctccagttttatgcacagtgccgccgttggttatcggcgggtttcc +atcttgacccaagggtgcttgtttttgaggagtctgtgccctgc---cgttgtaggacatttcttaagaa-- +----ggctgtgggtaagttctgctgttttatgaagtggttgggacagga------gtgcacctgctttttgg +----------------aaccagcagagggtctagttggcgaccatggc--------catgataatgaagcct +atgagggctctgaggtcgatcaggccgagcccgcccatctcgatgtttctgggacttatgccgtccatggcc +gccaactcgaggccctgtatagggcactcaacatcccacatgacattgcagctcgagcctcccgtttgactg +ccaccgtcgaactcgttgcaggtccagaccgcttggagtgccgcactgtgctcgggaataagactttccgga +cgacggtggttgatggcgcccatcttgaggcgaacggccc------------------------cgagcagt +acgttctttcgtttgacgcctctcgccaatctatgggggccgggccgcatagtctctcctacgagctcactc +ctgctggtttgcaggtcaagatttcatct-------aacggcctggattgcactgcaacgttccct---ccg +ggtggggcccctagcgctgctccgggggaggtggcagccttctgcagtgccctttacaggtacaacaggttc +actcagcaccactcgcttataggtggcttgtggctgcatcctgaggggttattgggtatcttcccccctttt +tctcccgggcaccattgggagtccgctaaccctttttgtggggagggaacactttacacacgaacttggtcc +acatctggtttttctagtgactttgctcccccggaggcagctgtccctgcaccagctgctactct----ggg +gctatctc---gtcccacaccccccgttagtgacat-----------------ctgggtgtt---------- +---------gccgtcaccc----tctgaagaac--------------tccaggtcgacacgatgcccccccc +tcttg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctcctgagcccgtccaaccgcccagc +ctggccaaacctgag-------------------------------------acccctgtgcgtaagccgtc +aacaccacc--------------------------------------gcttcgccgtacccgtcgcc----- +-------------------tcctttacacctacccggacggtgctaaggtgtatgcagggtcattgtttgag +tcggactgtgattggctggttaatgcgtcgaatcccggccatcgtcctggcggcggcctttgccatgccttc +taccaacgctaccccgagtcct------ttcacccgactgagtttattatgcgcgacgg---tcttgccgcg +tacactttaaccccccggcctatcattcatgcagtagcccctgactatagggttgagcataacccaaagagg +cttgaggcagcataccgagagacttgctcccgccgcggtaccgccgcctacccactcctcggctcgggcata +taccaagttcccgtcagcctcagctttgacgcttgggagcgtaaccaccgccccggggacgagctctaccta +accgacctcgccgctacc-------------------------------------------------tggtt +cgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------gccggcccttacaataactgaggatgcagc +cc------------gtacagccaacctagcactggagatcg------------atgctgctacggaggtcgg +ccgggcctgt---gccggctgtgcagttagtcctggggttgtgcactatcagtttactgctggggtcccagg +ttcggggaagtcgcgttctatacagcagggggatgttgacgtagtggttgttcccacccgggagctccggaa +tagttggcgtcgccggggtttcgcggcttttacacctcatacggcggcccgtgttaccatgggccgtcgtgt +tgtgattgatgaggccccatccctcccaccgcatttactactactacacatgcagcgggcctcgtcggtcca +ccttcttggcgacccaaaccagatccctgccatagacttcgagcacgccggcctggtccccgcaatacgccc +cgagcttgctcccaccagttggtggcatgtcacccatcgctgccccgctgacgtgtgtgagcttatacgcgg +ggcttaccccaaaatccaaaccactagccgcgtgctgcggtctttattctggaatgag------cccgccat +cggccagaagttagttttcacacaggcagctaaagctgctaaccctggtgcaatcactgtccatgaagctca +gggcgctacatttacggagaccacagttatagccactgctgatgctaggggccttattcaatcttctcgggc +tcatgctatagtcgcactcacccgccacacagagaagtgcgtcatacttgatgcccccggcctactacgtga +agttggcatatcggacataattgtcaacaacttc------------------------------ttcctcgc +cggcg--gagaagtgggccaccatcgcccctctgtaatacctcgcggtaatcctgaccagaacctcgcgac- +-----actacaggcctttccaccttcttgtcagattagtgcctaccaccagttagctgaggaacttggccac +cgcccagctcccgtcgccgctgttttgcccccttgccctgaactcgagcaaggcttattatatatgccgcag +gagctcacggtgtctgatagcgtgctggtctttgaactcacggacatagtccactgccggatggctgcccct +agccagcggaaggccgtcttatcgacgctcgtgggtaggtacggccgtcggacaaagctgtatgaagcagct +cactctgacgtccgtgagtccctggctagattcatccccaccattgggcccgttcaggctactacgtgtgag +ttatatgagctggttgaggccatggtggaaaaaggtcaggatggttctgccgtgcttgagctcgacctctgc +aatcgtgatgtatcgcgtatcacatttttccagaaagattgtaacaaattcaccacaggggagaccattgcc +cacggtaaggtcggccagggcatctcggcttggagtaagaccttctgtgccctgtttggtccttggtttcgt +gctattgaaaaagaaatactagccctgctcccgcctaatatcttctatggagaagcatatgaggagtctgtg +tttgctgcccctgtgtcgggggcaggttcaagcatg---gtgtttgagaatgatttttcagagtttgatagc +acccaaaataacttctccct------------------tggcctagagtgcgtggttatggaagagtgtggc +atgccccagtggctaatccggttgtaccacttggttcggtcggcctggatcctacaggcgccgaaggagtcc +cccaaagggttttggaagaaacattccggtgagcccggcaccctcctctggaacactgtttggaatatggcg +atcatagcacactgctatgaatttcgtgattttagggttgccgctttcaagggagatgattccgtggtcctc +tgtagcgactaccgtcagagccgcaatgcagcggccctgattgcaggttgcgggctcaaactgaaggttgat +tatcgccctattgggttgtatgctggtgtggtagtggcccctggtctggggacgctaccagatgtggtgcgc +tttgctggccggctgtctgagaagaactggggccctgggcctgagcgggctgagcagttgcgcctagctgtt +tgtgacttccttcgagggttaacgaatgttgcgcaggtatgtgttgatgttgtatcccgag-------ttta +tggggttagccctgggttggtacataaccttattggcatgttgcaaaccatagctgatggcaaagcccattt +tacagagactgttaaacctgtgcttgaccttacgaactctatcatacagggggtggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccat------actgccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattcccagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgcccccgacgtcgtaccgcaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgtgaccagtccct----------- +------gcgcccctccgctgtcccacgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgccatatcacctgcccccgatacagcccctgtgcctgatgttgactcgcgcggcgccatattgcggcgcca +gtataatttatccacatccccgcttacatcatctgttgcttcgggtactaacctggttctttatgctgcccc +gctaaaccctttgctgccccttcaggatggcactaacactcacatcatggccactgaggcatctaattatgc +ccagtatcgggttgtccgagctacgatccgctacaggccattggtaccaaatgctgtcggcggttatgcaat +atccatttcattttggcctcagactcctactacccctacgtctgttgatatgaactctatcacctccactga +tgttaggattctagttcagcctggcattgcttctgagttggttatccctagtgagcgcctccattatcgtaa +ccaaggctggcgctctgtggagacctcgggtgtggctgaagaggaggctacttctggtttggtaatgctttg +tatccatggctctcctgttaattcctacaccaataccccctataccggggcgcttggactccttgatttcgc +tttagagcttgagtttagaaacctgacacccgggaacaccaacacccgtgtgtcccggtatacaagcacagc +ccgtcatcggctgcgccgcggtgctgatggcaccgccgaactcaccaccacagcggccacgcgcttcatgaa +ggacttgcacttca---ccggcacgaat---ggggtcggtgaggtgggtcgtggtattgccctcacactctt +taatcttgctgacacgcttctcggtggtttgccgacagaattaatttcgtcggctggggggcagttgttcta +ctcccgccccgtcgtctcagccaatggcgagccgacagtgaagttatacacaactgtagagaatgctcagca +ggataaagggattgctattccacatgacatagatctgggtgactcccgtgtggtcatccaagactatgacaa +ccagcatgagcaggatcgacccactccctcgcctgccccttctcgccctttttcggttcttcgcgctaatga +tgttttatggctttc-----------------------------tcttactgccatcgagtacgat------ +cagaccacatatgggtcgtccaccaacccgatgtatgtctcggacactgtcacatttgt---caacgtggct +acaggcgcccaggctgtcgcccgttcccttgactggtctaaagtcactctggacggccgccctctcactacc +at-----ccagcaatattccaaaacattttatgttc-tcccgcttcgcgggaagttatctttctgggaggcc +gggacgactaag--gccggttacccctataattacaacacaactgctagtgatcagattctgattgaaaatg +cggctggtcat------cgtgttgctat-ttccacgtataccaccagcttggg--------------cgctg +gccctgtgtctgtctc-tgcagttggcgttttagccccacattcggcccttgcagtccttgaggacactatt +gatt---------accctgcccgtg----cccacactttcgatgacttttgcccggagtgtcgtgctc---t +tggcttgcaggggtgtgccttccagtc--------tactattgctgagcttaagtgtct------------- +--------taaaatgaaggtaggtaaaacccgggagtattaattaa-tt----tcctctt---t------gt +gccc-cct--------tc-aagc-ttttt----gc-ct---t----------------attt-t-------t +tcttttct----gc----------------gttccgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------aaaaaaaaaaaaa----------------- +------------------------------------------------------------------------ +----------- +>MH976520.1/15082/1-5082 |Hepeviridae isolate HEV1/03B18 nonstructural polyprotein (ORF1) gene, complete cds +------------------------------------------------------------------------ +----atggaggcccatcagtttatcaaggctcctggcatcactactgctattgag---caggctgctctagc +agcggccaactctgccctggcgaatgctgtggtagttaggccttttctctctcaccagcagattgagatcct +cattaacctaatgcaacctcgccagcttgttttccgccccgaggttttctggaatcatcccatccagcgtgt +catccataatgagctggagcttta---ctgccgcgccc-gctccggccgctgccttgaaattggcgcccatc +cccgctcaataaatgacaatcctaatgtggtccaccgctgcttcctccgccctgttgggcgtgatgtccagc +gctggtatactgcacccactcgcgggccggctgctaattgccggcgttccgcgctgcgcgggctccccgctg +ccgaccgcacctactgcttcgacgggttttctggctgtaactttcccgccgagacgggcatcgccctctatt +ccctccacgatatgtcaccatctgacgtcgccgaggccatgtttcgccatggtatgacgcggctttatgccg +ccctccatctt-ccgcctgaggttttgctgccccctggcacataccgcaccgcatcgtatttgctgattcat +gacggcaggcgcgttgtggtgacatatgaaggtgatactagtgctggttataaccacgatgtctccaacctg +cgctcctggattagaaccaccaaggtcactggagaccacccccttgttatcgagcgggtcagggccattggc +tgccattttgttctcttgcttacggcggccccggagccatctcctatgccttatgtcccttacccccggtct +accgaggtctatgtccgatcgattttcggcccgggt---------ggtaccccttccctattcccaacctca +t----------gctccactaagtcta-ccttccacgctgtccctacccacatttgggaccgtcttatgttgt +tcggggccaccctagacgaccaagccttttgctgctcccgtttaatgacctatctccgcggcattagctaca +aggttactgtgggtactcttgtggctaatgaaggctggaacgcctctgaggacgccctcacagctgtcatca +ccgccgcctaccttaccatttgtcaccagcggtacctccgcacccaggctatatctaaagggatgcgccgcc +tggaacgggagcatgcccagaagtttataacacgcctctacagctggctcttcgagaagtc---------tg +gccgtgactacatccccggccgtcagttggagttttatgcccagtgtaggcgctggctttcggccggcttcc +atcttgacccacgggtgttggtttttgacgagtcggccccctgc---cactgcaggaccgcgatccgtaa-- +----ggctttctcaaagttctgctgctttatgaagtggcttggtcagga------gtgtacttgtttccttc +----------------agcctgcagaaggcgtcgttggtgaccagggt--------catgataatgaggcct +atgaggggtccgatgttgaccccgctgagtccgccattagtgatatatctgggtcctatgtcgtcccaggca +cagccctccaacctctctatcaggccctcgatctccccgctgagattgtggctcgtgcgggtcggctgaccg +ccacagtaaaggtctcccaggtcgatgggcggatcgattgtgagacccttcttggtaacaaaaccttccgca +cgtcattcgttgacggggcagtcttagagaccaatggccc------------------------ggagcgcc +acaatctttcctttgatgccacccagagcactatggctgctggccctttcagcctcacctatgccgcctctg +cagctgggctggaggtgcgctatgttgct-------gccgggcttgatcaccgggcggtttttgcc---ccc +ggagtttcaccccggtcagcccctggcgaggtcaccgccttttgctccgccctatacaggttcaatcgtgag +gcccagcgccattcgctgaccggcaatttatggtttcatcctgaggggctccttggcctctttgccccattt +tcacccgggcatgtctgggagtcggctaatccgttctgtggcgagagcacactatatactcgtacttggtcg +gaggttgacgccgtctctagtccggcccggcccgatttaggttttatgtctgagccttctatatctagtagg +gccgctac----------------------------acctac-----------ccctgcggc---------- +---------ccctctacct----tcctctgcac--------------cggaccctctcccccctccctctgc +cctgg------------------------------------------------------------------- +-------------------------------------------------------------cgc-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttgatgagccggct------tctggc +actatcgc-----------------cgg------------------------ggccccggccataacccacc +aga----------------------------------------------cggcccggcaccgccgcc----- +-------------------tgctctttacctacccggatggctctaaggtatttgccggctcgctgttcgag +tcgacatgtacgtggctcgtcaacgcgtccaatgttgaccaccgtcccggcggcgggctttgccatgcattt +taccaaaggtaccccgcctcct------ttgatgccgcctcttttgtgatgcgcgacgg---cgcggccgcg +tacacattaacccctcggccaataattcacgctgtcgcccctgactataggttggaacataacccaaagagg +cttgaggctgcctatcgggagacttgctcccgcctcggtaccgctgcatacccgctcctcgggaccggcata +taccaggtgccgatcggccccagttttgacgcctgggagcggaaccaccgccccggggatgagttgtacctc +cctgagcttgccgccaga-------------------------------------------------tggtt +tgaggccaatcggccgactcg--------------------------------------------------- +------------------------------------------cccaactctcactataaccgaggatgttgc +ac------------ggacagcgaacctggccattgagctgg------------actcagccacagatgtcgg +ccgggcttgt---accggctgtcgggtcacccccggcgttgttcagtaccagtttactgctggtgtgcctgg +gtccggcaagtcccgctctatcactcaagccgatgtggacgttgtcgtggtcccgacgcgcgagttgcgcaa +tgcctggcgtcgccgcggcttcgctgctttcactccgcacacagccgctagagtcacccaggggcgccgggt +tgtcattgatgaggctccgtccctccctcctcacttgttgctcctccacatgcagcgggccgccaccgtcca +tctccttggcgacccgaaccagatcccagccatcgactttgagcacgctgggcttgttcccgccatcaggcc +cgacttagcccctacctcctggtggcatgttacccatcgctgccctgcagatgtatgtgagctgatccgtgg +tgcataccccatgatccagaccactagtcgggtcctccgttcgttattctggggcgag------cctgccat +tgggcagaaactagtgttcacccaggcggctaaggccgccaaccccggctcagtgacagtccacgaggcaca +gggcgccacttacacggagaccaccattattgccacggcagatgcccgaggccttattcagtcgtctcgggc +tcatgccatcgtcgctctgacgcgccacactgagaagtgcgtcatcattgacgcaccgggcttgcttcgcga +ggtaggcatctccgatgcaatcgtcaataacttt------------------------------ttcctcgc +cggcg--gcgaaattggtcaccagcgcccatctgttatcccgcgtggcaatcctgatgccaatgctgacac- +-----cttggctgcctttccgccgtcttgccagattagtgcctttcatcagttggctgaggagcttggccac +agacctgcccctgttgcagctgttttaccaccctgccccgagcttgaacagggcctcctctacctgccccag +gaactcaccacctgtgatagcgttgtaacatttgagttaacagatattgtgcactgccgcatggccgctccg +agccagcgcaaggctgtgctgtccacactcgtgggtcgctacggccgtcgcacaaagctttacaatgcctcc +cactctgatgttcgcgactctctcgcccgttttatccccgccattggccccgtacaggttacaacttgtgaa +ttgtacgagctagtggaggccatggtcgagaagggccaggacggttccgccgtccttgagctcgacctttgc +aaccgtgacgtgtccaggatcaccttctttcagaaagattgcaataagttcaccacgggcgagaccattgcc +catggtaaagtgggccagggcatttcggcctggagcaagaccttttgcgccctcttcggtccctggttccgc +gctatcgagaaggctattctggccctgctcccccagggtgtgttttacggtgatgcctttgatgacaccgtc +ttctcggcggcggtggctgcagcaaaggcgtccatg---gtgtttgagaatgacttttctgagtttgactcc +acccagaataatttctctct------------------aggcctagagtgtgctattatggaggagtgcggg +atgccgcagtggctcatccgtttgtatcatcttataaggtctgcgtggatcctgcaggccccgaaggagtct +ttgcgagggttttggaagaaacactccggtgagcccggcactcttctatggaatactgtctggaatatggcc +gttattacccactgctatgacttccgcgatttgcagatggctgccttcaaaggcgatgactcgatagtgctt +tgcagtgagtaccgtcagagccccggggctgctgtcctgatcgctggttgtggcttaaagttgaaggtagac +ttccgcccgattggtttgtatgcaggtgttgtggtggcccctggtcttggcgcgcttcctgatgttgtgcgc +tttgccggccggcttaccgagaagaattggggccctggccctgagcgggcggagcagctccgcctcgctgtg +ggtgatttcctccgcaagctcacgaatgtagcacagatgtgtgtggatgttgtttcccgtg-------ttta +tggggtttcccctgggctcgttcataacctgattggcatgctacaggctgttgctgacggcaaagcccattt +cactgagtcagtaaagccagtgcttgacctgacaaactcaatcctgtgtcgggtggaatga----------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH184580.1/17310/1-7310 |Hepeviridae strain HEV_006_2, complete genome +---------------------------ggcagacca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccaccagtatattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggtcaggccgttcttgtctcgactacagactgatattct +cataaatttgatgcaaccccggcagctcgtattccgccctgaagttctgtggaatcacccgatccagcgagt +catacacaatgaattagagcagta---ctgtcgtgctc-gcgctggccgctgcctggaggtcggagctcatc +caagatccattaatgacaaccccaatgttctgcaccgatgtttccttcgtccagttgggagggatgtgcagc +gttggtactctgctccgactcgcggcccggcggccaattgccgccgctctgcgttacgtggcttacccccag +ttgaccgcacctactgttttgatgggttttcccgttgcgcctttgctgctgagactggaattgccttatact +cactacacgacctctggcctgcggatgtcgcggaagctatggctcatcatgggatgacccgcttgtatgcag +ccctccattta-ccccctgaggttttgttaccacccggcacttaccacactacctcttacttgctgatccac +gacggcaaccgcgctgtcataacctatgagggggataccagtgcgggctacaaccatgatgtatctattctc +cgtgcatggattcgtacaactaagataactggtgatcacccgttggttattgagagggtccgcgccattggc +tgtcattttgtgctgcttcttactgcagcccctgaaccatcccctatgccttatgtcccatatcctcgttca +acagaggtgtatgttaggtctatatttggccctggc---------gggtcgccttctcttttcccatcagcc +t----------gctctaccaagtcca-catttcatgctgttccggtccatatctgggaccggctcatgcttt +ttggcgccactttagacgaccaagcattctgctgctcgcggctcatgacctacctccgcgggatcagttata +aggtgactgttggtgcacttgtcgccaatgaaggctggaacgcctcggaggatgcgctcactgctgtgatca +ctgcagcgtacctgactatttgccaccagcgctacctccggactcaggctatatctaaaggcatgcgtcggc +tagaagtcgagcatgcccagaagtttattaccagactttatagctggctgtttgagaaatc---------tg +gccgtgattacatccccggccgtcaactccagttttacgcgcagtgccgccgctggctctctgccggcttcc +atctggatcccagagtccttgtctttgatgaggctgtcccttgc---cgctgtaggagtttcttgaagaa-- +----ggctgctggtagattttgctgttttatgaagtggctaggacagga------gtgcacctgtttcttag +----------------agccggctgagggccttgttggtgactgcggt--------cacgataacgaggcct +acgagggttccgaggtggaccctgccgaacctgcccaccttgatgtctctggaacctacgcagttcatggcc +gtcagcttgaggctctatacagggcgctcaacatcccgcaagacattgcagctcgtgcgtcgcgcctgacgg +ccactgtagagctcaccgctagtccaggccgccttgagtgccgtacggtgcttggaaataagaccttccgca +catcaataactgatggcgcccaccttgaggtcaatggtcc------------------------tgagcaat +atgttctgacatttgatgactcccgtcaagcgatgggggccgggccccacagtctgacatacgagctcaccc +ctgctggtctgcaggttaagatgtcttct-------aatggccttgattgtactgctgttttcccc---ccc +ggaggagcaccaagtgccgcgccggccgatgtcgcagccttctgtagtgctctatacagatacaacagattc +actcagcgccactcactaaccggcgggttgtggttgcaccctgaggggcttttggggctgttcccccctttc +tcccctgggcatatttgggagtccgcaaatcctttttgtggtgagggcacactctacacccggacctggtct +acatctggtttctctagtgacttttcccctcctgaggcagctctagccgccccagctttcgatgg----ggg +gttgcccccaggcaccccctcttctactagtggcgt-----------------ttgggtgtt---------- +---------cccgccggcc----cctgagggct--------------cagtggctactccgtcgcttgcagc +cccggc---taaacccgccgg---------------------------------------cctgcc------ +------------------------------------------------------------------------ +-cagccctgcc------------------------------------------------------------- +---------------------tttccgccgcttttagagggttcagagactgctccaccgcttgcagccccg +g---------------------------------------------ttagtaagcctactgacctgtccagc +cctaccatatctaag-------------------------------------cctcccgttcgtaagccacc +ctccccacc--------------------------------------accggtccgtacccgccgac----- +-------------------tcctttacacttacccggacggggctaaggtttatgcgggctccctgttcgag +tctgactgtgattggctggtcaacgcctctaaccctggccaccgcccgggtggcggcctctgtcacgccttt +taccagcgctttccagagtcgt------tccaccctaccgattttgtcatgcgtgatgg---cttagctgcg +tacactttgaccccacgtccgatcattcacgctgtggcccctgactacagggttgagcagaatcccaagagg +ctggaggcggcgtatcgcgagacttgctctcgccttggtacagccgcttacccactcctggggtctgggatt +tatcgagttcctgtgggcttaagttttgacgcctgggagcgtaaccaccgcccaggcgatgagctctatctt +accgaacccgctgctgcg-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagctttaacaattactgaggatactgc +tc------------gcacggctaatctcgcgcttgagattg------------attccgctaccgaggtggg +tcgtgcttgc---accggctgcactgtcagccctgggatcgttcattatcagtttactgctggggtacccgg +ttctgggaaatctaggtccatacaacaaggggacgtcgacgttgtcgttgtgccaacccgcgagctccgcaa +tagttggcggcgccgcggttttgctgcttttacacctcacacggcggcccgcgttaccgctggccggcgtgt +tgtgatcgatgaggcaccctcgctcccgccacatttgttactgctccatatgcagcgggcttcatcagtcca +tctcctcggcgaccccaatcagattcctgctattgattttgagcatgcaggtctggtcccggcgattcgtcc +tgagctcgccccgactagttggtggcacgttacacaccgttgccctgctgatgtgtgtgagctcatacgtgg +ggcctatcctaagatccagaccaccagccgtgtgatgcgatccttgttttggaatgag------cctgcagt +aggtcagaagttggtcttcacgcaggcagctaaggcagccaaccccggcgcaattactgtccatgaggccca +aggcgccacgtttacagagactactattatagccacggccgacgctaggggccttattcagtcctctcgcgc +gcacgcaattgttgcacttacccgtcatacagaaaaatgtgtcattctggatgctcctggccttttgcgcga +ggtcggtatttctgatataattgttaacaatttc------------------------------tttttggc +cggcg--gtgaggtaggccaccaccgcccctccaccataccccgagggaatccagaccagaatctagatac- +-----cttacaggcattccctccgtcctgccaaattagtgcttaccaccagttggccgaggagctgggccac +cgcccggccccagtggctgctgtattaccgccctgccctgagctcgaacagggtttactttatatgccacag +gaactcacagtgtctgatagcgtcctggtctttgagctcacggacatagttcactgccgaatggcagccccg +agccagcggaaggccgtcctctcaacgctcgtcggcaggtatggccgccgaacgaagttgtatgaggcagcc +cattctgatgtccgtgagtctttaggaaggtttatccctaccattgggccagtccaggccaccacatgtgag +ttatatgaactagtggaggctatggtcgagaagggccaggacggttccgctgtgttagagcttgatctctgt +agccgtgatgtttctcgtatcacattcttccagaaggactgcaataaatttacaacaggtgagactattgcc +catggcaaggtgggccagggtatttcggcctggagcaaaaccttttgtgctttatttgggccgtggttccgt +gccatcgaaaaggagattttagccctgctcccacctaacatcttctacggtgatgcttttgaggagtcagtg +ttctcggcggccatctctggggcgggctcctgcatg---gttttcgagaatgacttctctgagtttgacagt +acccaaaacaatttctctct------------------cggccttgagtgtgttattatggaagagtgtggc +atgcctcagtggcttattcggctgtaccatttagtcaggtcagcctggaccttgcaggccccgaaagagtct +ttaaaaggtttttggaagaagcattctggcgagcctggtacactcctctggaacactgtctggaacatggca +attatagcgcattgctatgagtttcgtgatttgagagtggcagcgtttaaaggggatgattcagtggtcctc +tgtagtgactaccgtcagagtcgtaatgcggccgccttgattgctggatgtgggttaaaactgaaggttgac +tatcgccctatagggctatacgccggtgttgtggtcgccccgggtctcggggcacttcctgacgttgttcgg +ttcgccggccggctgtctgagaagaattggggcccaggccccgaccgcgccgagcagttgcgtctagcagtt +tgtgatttcctccgaaggttgacgaatgttgcgcaggtctgtgttgatgttgtgtctcgtg-------ttta +tggggttagccctggactggtacataaccttattggtatgttacagaccattgcagatgggaaggctcattt +taccgagactgtcaaacctgtactggatcttacaaattctatcatacagaggttggaatgaataacatgtt- +g----------------tgtgcatcgcccatggg------------ttcaccatgcgccctcgggctgttct +gttgctgttcttcgtgtttctgcctatgttgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcagtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaatccggggctggagctcgccctc +gacagccgccccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctacccca---------gccggggctgcgccgttaac +cgctgtctcacctgcacctgatacggctccagtccctgacgttgattcccgtggcgctatcttgcgccgcca +gtataacctgtctacttctcctttgacctcttctgttgcttctggtaccaatcttgttttatatgctgcccc +gctaaatcctcttctacccctccaggacggcaccaatactcatatcatggcgaccgaggcgtctaattacgc +tcagtaccgggttgttcgggctacaatccgttatcgccctttggtgccgaatgctgtcggtggttatgcgat +ctctatctctttttggccccagactacaaccacccccacctccgttgatatgaattccatcacttctaccga +cgttaggattttagtccagcccggtatagcttctgagttggtcattccgagtgagcgcctccattaccgtaa +ccagggctggcgctctgttgagacctcgggtgtggctgaggaggaggcaacatcgggcctggtcatgctttg +tattcatggctcccctgttaattcctataccaatacgccctatactggggcattgggacttcttgactttgc +acttgagctcgaatttaggaacttgacccctgggaacactaacacccgtgtatcccggtacactagtacggc +ccgtcaccgtttacgccgtggcgctgacgggactgcagagctcacgactactgcggccacgcgcttcatgaa +ggacctgcacttta---ccgggacgaat---ggcgtcggcgaggtaggccgtggcatagccctaactttatt +caaccttgctgatacgcttctcggcggtttgccgacagaattgatttcgtcggccggaggtcagctctttta +ttcccgtccagttgtctcggccaatggcgagccgactgttaaattatatacttccgtcgagaatgcacagca +ggataagggcattgccataccacatgatatagatctaggggactcacgcgtggttatccaggattatgataa +tcagcacgagcaggataggcctaccccttcgccagccccgtcccgccccttttcagtcctccgtgctaatga +tgtattgtggctttc-----------------------------tctcactgctgctgagtacgac------ +caaaccacttatggctcgtcgaccaaccctatgtatgtttcagacactgtcacctttgt---caatgtggcc +acgggagcccaggctgtcgcccgctcccttgattggtctaaggttaccttggacggtcgacctcttactacc +at-----tcagcagtactctaagacattttatgtgc-tcccactccgygggaagctttctttctgggaggct +ggcactactaag--gctgggtacccttataattataacaccactgctagtgatcagatcttgatagagaatg +cagccggccac------cgtgtcgctat-atctacctatactactagtcttgg--------------tgctg +gcccagtgtcagtctc-tgcggttggtgttcttgccccgcactctgctttagctgtgcttgaggatactatt +gatt---------accccgctcgcg----cccatacttttgatgatttctgccctgagtgccgtaatc---t +cggcctacagggctgtgctttccaatc--------tactattgctgaacttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-ttt---aa-tctt----------gt +gccc-cct--------tc-tagt-tc-ct----gc-tt-ta-------------------tc-t-------c +ttttttct----gcg----------------ttccgcgctccctg---------------------gaaa-- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH184581.1/17327/1-7327 |Hepeviridae strain HEV_022, complete genome +---------------------------ggcagacca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccaccagtttattaaggctcctggcattactactgccatcgag---caggctgctctggc +tgcggccaactctgccttggcgaatgctgtggtggttaggccgtttttgtcccgtttacagactgacatcct +cattaatttgatgcaaccccggcagctcgtatttcgtcctgaggtcttatggaaccacccgatccagcgggt +tatacacaatgagctggagcagta---ttgccgcgctc-gcgctggccgctgcctggaggtcggggctcatc +caagatctattaatgacaaccccaatgtcttgcaccggtgtttccttcgtccggttgggagagatgtgcagc +gttggtactctgccccgactcgtggtccggcggctaattgccgccgctctgctctacgtggtctaccccctg +ttgatcgcacctactgcttcgacgggttttctcgttgcaccttcgctgctgagactggaattgccttatact +cactacatgacctttggcctgcggatgttgcagaagctatggcccgccatgggatgacacgtttgtacgcag +ccctccattta-ccccctgaggttctactaccacccggcacctaccacaccacctcttacttgctgattcac +gatggcaatcgtgctgtcataacttatgagggggacaccagcgcaggctataatcatgatgtgtccatcctc +cgtgcatggattcgtacaacaaagatagttggtgaacacccgctggttatagagagggtccgtgctattggc +tgccactttgtgctgcttctcaccgctgcccctgaaccttctcctatgccttatgtcccataccctcgttca +acagaggtgtatgttaggtccatattcggccctggc---------gggtcgccctctctctttccatcagcc +t----------gctctactaagtcta-catttcatgctgttccggtccatatttgggaccggctcatgcttt +ttggcgctactttagacgaccaagccttctgctgctcgcggcttatgacctatctccgcgggatcagttata +aggtgactgttggcgcacttgtcgctaatgaaggctggaacgcctcggaggatgcgcttactgctgtgatta +ccgcggcgtatctaactatctgccaccagcgctacctccgaactcaggctatatctaaaggcatgcgtcggc +tagaggtcgagcacgcccagaagtttattactagactttacagttggctgtttgagaagtc---------cg +gccgtgattacatccctggccgtcaactccagttttacgcgcagtgccgccgctggctctctgccggcttcc +atttagatcctagagtccttgtctttgatgaggctgtcccttgc---cgctgtaggagctttctgaagaa-- +----ggctgccggcaagttttgttgcttcatgaagtggctagggcagga------gtgcacctgtttcctgg +----------------agccggccgagggcctggttggtgattgcggt--------catgataacgaggcct +acgagggttccgaggtggatcccgccgagcctgctcacctcgatgtctctgggacctatgcagttcacggcc +gccagcttgaggctctttacagggcgctcaatattccgcatgatattgcggctcgcgcatcgcgtttgacgg +ccactgttgagctcaccgctagcccaggtcgccttgaatgccgtacggtgcttggaaataagaccttccgca +catcaataactgatggcgcccacctcgagatcaatggtcc------------------------tgagcagt +atgttcttacatttgatgactcccgccaagcgatgggagctgggccccatagtctgacatatgagcttaccc +ctgccggtctacaggttaatatatcttcc-------aatggcctagactgtactgctgtcttcccc---cct +ggtggggcgccaagtgccgcaccggctgaggttgcagctttctgcagtgccctatacagatacaacagattc +acacagcgccactcgctaaccggcgggctgtggttacatcctgaggggcttctggggctgttcccacctttc +tctccagggcatgtttgggagtctgcaaatcctttttgtggtgagggtacactctacacccggacttggtct +acatctggtttctctagtgatttctctccccctgaggcggcttttgccgcccctgctcctggagg----agt +cttccctccaggcaccccctcctctgctagtgatgt-----------------ctgggtgct---------- +---------ccctccaccc----tccgaggggt--------------cagtggctgccccaccgcttgcagc +cccggctagtaggcctgttag---------------------------------------cctacc------ +------------------------------------------------------------------------ +-tagccttgct------------------------------------------------------------- +---------------------ctcccgccgccctctgaggggtcagtgactgctccaccgcttgcagccccg +g---------------------------------------------ctagtaagcccactggcccgcccggc +cctgccccatctaag-------------------------------------ccccctgctcgtaagccgcc +ccctccgcc--------------------------------------gccagcccgcacccgccggc----- +-------------------ttctttatacttacccggatggggctaaggtttatgcaggctccctgtttgag +tcagactgtgactggctggtcaatgcttccaaccctggccaccgccccggtggcggcctttgccatgctttt +taccaacgcttcccagagtcgt------tccacccgactgatttcatcatgcgcgaggg---cctcgccgca +tatactttgtccccgcgcccgatcattcatgctgtagctcctgactatagggttgagcagaaccctaagagg +ctggaggcggcgtatcgcgagacctgctcccgtcttggcacagccgcttacccactgctgggatctgggatt +taccaagtacctgttggcttaagttatgacgcctgggagcgcaaccatcgcccaggtgatgagctctacctt +accgagcccgccgccgcg-------------------------------------------------tggtt +tgaggccaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccttaacaattactgaggacactgc +cc------------gcacggctaatctcgcgcttgagattg------------actctgctaccgaggtggg +tcgtgcttgt---accggctgtactgttagccctgggattgttcattatcagtttactgccggggtacctgg +ttccgggaaatctaggtccatacaacagggggacgtcgatgttgtggttgtgccaacccgcgagctccgcaa +tagctggcggcgccgcggttttgctgcttttacaccccacacagcagcccgcgttaccactggccggcgtgt +tgtgattgatgaggcaccctcgctcccaccccacttgctattgctccatatgcaacgggcctcatcggtcca +ccttttaggtgaccccaatcagattcccgccattgattttgagcatgcaggcttggtcccggcgattcgtcc +tgagcttgccccgactagctggtggcatgttacacatcgttgccctgctgacgtgtgtgagctcatacgtgg +ggcttaccctaagatccaaactaccagtcgcgtaatgcgatctttgttttggaatgag------cctgcagt +aggccagaagttggtcttcacgcaggcagctaaggcagccaaccccggctcaatcaccgtccatgaggccca +gggtgccacgtttacagagactaccatcatagccacggccgatgctagaggccttatccagtcctctcgtgc +gcatgcaatagtcgcacttactcgccatacagaaaaatgtgttatcttagatgctcccggcttattgcgtga +ggttggtatttctgacataattgttaacaacttc------------------------------tttttggc +cggag--gcgaggtaggccaccaccgcccctccaccataccacgagggaacccagatcagaatttagatac- +-----tttgcaggcgttccctccgtcctgccaaattagcgcttatcaccagttagctgaggagctgggccac +cgaccggctccagtggctgctgtactaccgccctgccctgaactcgaacagggtacactttatatgccacaa +gaactcacagtgtccgatagcgtcctggtttttgagctcacggacatagttcactgccggatggcggcccct +agccagcggaaagccgtcctttcaacgctcgtcggccggtatggccgccgaacgaagttgtatgaagcagcc +cactctgacgtccgtgagtctttaggaaggttcatccccaccatcgggccagttcaggccaccacatgtgag +ctatttgagttggtggaggctatggttgagaagggccaggacggctccgccgtgctagagcttgacctctgt +agccgtgatgtttcgcgtatcacatttttccagaaggattgtaataaatttacaacaggtgagaccattgcc +catggcaaggtgggtcagggtatctcggcctggagcaaaaccttctgtgccctatttggaccatggttccgt +gctattgaaaaggagatcctagccctgctcccacctaatatcttctatggtgatgctttcgaggagtcagtg +ttctcggcagccatctctggagcaagcacttctatg---gtttttgagaatgacttctctgagtttgacagc +acccaaaataatttctccct------------------cggccttgagtgtgtcattatggaagagtgtggc +atgccccagtggcttatccgtttgtaccatttagtcaggtcagcctggatcttgcaggccccgaaggagtcc +ttgaaaggtttttggaagaagcattctggcgagcccggcacactcctctggaacactgtctggaatatggcg +atcatagcacattgctacgaatttcgtgatctgagagtggcagcgttcaaaggggatgattcagtggttctc +tgtagtgactaccgccagagccgtaatgcggctgccttgattgctggttgcgggttaaaactgaaggttgac +taccgccccatagggttatacgctggtgtcgtggtggccccaggtctcggggcactccctgacgtcgtgcgg +tttgctggccggctgtctgagaagaattggggcccaggccctgatcgcgccgagcagttgcgcctagcagtc +tgtgacttcctccgaaggctgacgaatgttgcgcaggtctgtgttgatgttgtgtcccgcg-------ttta +tggggttagtcctggattggtacataaccttatcggcatgttgcagactattgccgatgggaaggctcattt +taccgagactatcaaacctgtactagatcttacaaattccatcatacagaggttggaatgaataacatgtt- +g----------------tgtgcatcgcccatggg------------atcaccatgcgccctcgggctgttct +gttgttgctcttcgtgtttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgcgggcg-gcgcagcggcggtgc +cagcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgccgatgtcgtatcacaatccggggctggagctcgccctc +gacagccgccccg---------------ccccctcggctcctcttggcgcgatcagtccca----------- +------gcgcccccccgctgccccccgccgtcgacctacccca---------gctggggctgcgccgttaac +agctgtctcccctgcacctgacacggctccagttcctgatgttgactcccgcggtgctatcttgcgccgcca +gtacaatttgtctacttcgcctctgacttcctctgttgcttccggtaccaatcttgttctgtatgctgcccc +gcttaatcctctcttacctctccaagacggcaccaatactcatattatggcgactgaggcgtccaattacgc +ccagtatcgggttgtccgggccacaatccgttatcgccctttggtgccgaatgctgtcggtggctatgcaat +ttctatctctttctggccccagactacaaccacccccacttctgttgatatgaattccattacctctactga +tgttaggattttagttcagcccggtatagcctctgagttggtcatcccgagtgagcgcctccattatcgcaa +ccagggttggcgctctgttgagacctcgggtgtggccgaggaagaggcgacatcaggtctggttatgctttg +tatccatggctctcctgttaactcctataccaacacgccctatactggggcgctggggcttcttgattttgc +acttgagcttgagtttaggaatttgacccctgggaacactaacacccgtgtgtcccggtacactagtacggc +ccgccaccgcttgcgccgtggcgccgatgggactgctgaactcacgaccactgcggccacacgcttcatgaa +ggacctgcatttta---ccgggacgaat---ggcgtcggtgaggtgggccgtggcatagctctaactttatt +caaccttgctgatacacttctcggcggtctgccgacagaattgatttcgtcggccggtggtcagctctttta +ctcccgcccagttgtctcagccaatggcgagccgactgttaaattatatacttccgtcgagaatgcacagca +ggataagggcattgccataccacatgatatagaccttggggactcccgcgtggttatccaggactacgataa +tcagcacgaacaggataggcctaccccttcgccggccccgtctcgccccttttcggtcctccgtgccaatga +tgtcttgtggctttc-----------------------------tctcactgctgctgagtatgat------ +caaaccacttatggctcgccgaccaaccctatgtatgtttcagacactgttacctttgt---taatgtggcc +acgggagcccaggctgtcgcccgctcccttgactggtctaaggtcaccttggatggtcgacctctcaccact +at-----ccagcagtattctaagacattttatgtgc-tcccactccgcgggaagctttctttctgggaggct +ggcaccactaag--gctgggtacccttataattataacaccactgctagtgatcagattctgatagagaatg +cagccggtcat------cgtgttgctat-atctacctatactaccagccttgg--------------tgctg +gtccagtgtctgtctc-tgcggtcggcgttcttgccccgcactctgccctggctgtgcttgaggacactatt +gatt---------accccgctcgcg----cccatacttttgatgatttttgccctgagtgccgtaatc---t +cggcctacagggttgtgcctttcagtc--------tactattgctgaacttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-ttc---ta-tcct----------gt +gccc-cct--------tc-tagt-tt-ct----gt-tt-ta-------------------tt-t-------c +ttttttct----gcg----------------tttcgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaaa--------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH184582.1/17159/1-7159 |Hepeviridae strain HEV_090, complete genome +-------------------------------------cgtatg-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggctaactccgccttggcgaatgctgtggtggtccggccgtttttatcccgtactcagactgacatcct +tatccatttgatgcaaccccggcagctcgtatttcgtcctgaagtcttgtggaaccatccgatccagcgagt +tatacacaatgaattggagcagta---ctgccgcgctc-gtgctggtcgctgcctggaggtgggggctcatc +caagatccattaatgacaaccccaatgtcctgcaccggtgctttcttcgcccggttgggagagatgtacagc +gctggtactctgccccgacccgcggcccagcggctaattgtcgccgctccgcactacgtggcctaccccctg +tcgaccgtacctactgcttcgacgggttctcccgctgcgctttcgcagctgagactggaattgccttatatt +cattacatgacctttggcccgcggatgtcgcggaggctatggcccgccatggcatgacacgcctgtatgcag +ctctccattta-ccccctgaggttttgctaccacctggaacttatcataccacctcatatttgctgattcat +gatggcgaccgtgctgtcgtaacttatgagggggacaccagtgctggctacaaccatgacgtgtctattctc +cgcgcatggatccgcacaactaagatagttggtgatcacccgctggtcatagagagggtccgtgctattggc +tgccactttgtgcttctcctcactgctgcccctgaaccatctcctatgccctatgttccataccctcgctca +acagaggtgtatgttaggtctatatttggccccggc---------gggtcgccttctctcttcccatcagcc +t----------gctccaccaaatcta-catttcacgccgtcccagtccacatttgggaccggcttatgcttt +tcggcgccactttggacgaccaagccttctgttgctcgcggcttatgacctacctccgtgggatcagttata +aggttaccgtcggagcacttgttgccaacgaaggttggaacgcctcggaggatgcactcactgctgtgatca +ctgcagcgtacttgactatctgtcaccaacgctacctccgaacccaggctatatctaagggcatgcgtcggc +tagaggtcgagcacgcccagaagttcattactagactttatagctggttgttcgagaagtc---------cg +gccgtgactacatccccggtcgtcagcttcagttttatgcacagtgccgccgttggctctctgccggcttcc +atttagaccccagggtccttgtttttgatgaggcggtcccctgc---cgctgtaggagctttctgaagaa-- +----ggttgccggtaagttttgttgctttatgaagtggttagggcagga------rtgcacctgttttctgg +----------------agccggctgagggcttgattggtgattgtggt--------cacgataacgaggcct +atgagggctccgaggtagaccctgccgagcccgcccacattgatgtctctgggacctatgcagttcatggcc +gccagcttgaggctctatatagagcgctcaatattccacatgacatcgcagctcgtgcatcacgtttgacgg +ccactgtagagcttactgctagcccaggtcgcctcgagtgtcgtacggtgcttgggaataagaccttccgca +catcaataactgatggtgcccaccttgaagttaatggccc------------------------tgagcagt +atgttttgacatttgatgactcccgccaagctatgggggctgggcctcatagtctcacatatgagctcaccc +ctgctggcctgcaggttaggatatcttct-------aatggtctagattgtactgctgtcttcccc---ccc +ggtggggcaccaagtgccccaccgggtgaggttgcagctttctgcagtgccttatacagatataatagattc +actcagcgtcattcgttaactggcgggctgtggttgcaccctgaggggcttcttggtctgtttccccctttc +tcccccgggcatctatgggagtctgcaaatcctttttgcggtgagggcacactttacactcgtacttggtcc +acatctggtttctcgagtgatttctcccctcctgaggcgacttttgccgccccagcccccgatgg----ggg +gctgcccccgggcaccccctcctttgccagtgatgt-----------------ttgggtgct---------- +---------cccgccacct----tctgaggggt--------------cagtggttgctttaccgcctgcagc +cccggc------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------------------------tagtatgtctactagtccgcccggt +cccgtcacacctagg-------------------------------------tttcccgttcgtaagccgcc +ctcaccgcc--------------------------------------gccggctcgtacccgccgcc----- +-------------------ttctttatacctatccggatggggctaaggtctatgcaggctccctgtttgag +tcagactgtgattggctggttaacgcatccaaccctggtcaccgccccggtggcggcctctgtcacgctttc +tatcagcgtttcccggaatcgt------tccatccgaccgaatttattatgcgcgaggg---ccttgccgcg +tacaccttgaccccacgtccgatcattcatgctgtggctcctgattatagggttgaacagaaccccaagagg +ctggaggcggcgtaccgtgagacttgttcccgccttggtacagccgcctacccgttgctgggttccgggatt +tatcaggtccctgtgggtttaagctttgatgcttgggagcgtaatcatcgcccaggtgatgagctttacctc +accgagcccgctgccgca-------------------------------------------------tggtt +tgaagctaataaaccaaccca--------------------------------------------------- +------------------------------------------accagccctaaccattactgaggacacagc +tc------------gcacggctaacctcgcgcttgaaatcg------------actctgccactgaggtggg +ccgtgcttgc---actggctgtactgttagccctgggattgtccactatcagtttactgccggggtacctgg +ttctgggaagtctaggtctatacaacagggtgacgttgatgttgtggttgtgcccacccgcgagctccgtaa +cagctggcggcgccgcggctttgccgcttttacaccccacacggcagctcgcgttacagctggccggcgtgt +tgtgattgatgaagccccctccctcccgccacacttgctattgctccatatgcagcgagcttcgtcggtcca +ccttctcggcgaccccaaccagatccccgctattgattttgagcatgcaggcctggtcccggcgattcgccc +agagcttgccccaactagctggtggcatgttacacaccgttgccctgccgacgtatgtgagctcatacgtgg +agcttaccctaagattcaaaccaccagccgtgtgatgcgatctttattctggaatgaa------cctgcagt +aggccagaagttggtgttcacgcaggcagctaaggcagccaatcccggcgcaattactgtccatgaggccca +gggcgctacttttactgagactaccattatagctacggctgatgccagggggcttatccaatcctctcgtgc +gcatgcaattgtagcacttacccgtcatacagaaaaatgtgttattctggatgcccccggcctgctgcgtga +ggttggcatctctgatattattgttaacaatttt------------------------------ttcctggc +cggcg--gtgaagtgggccaccatcgcccctccactataccccggggcaacccggaccggaatctagacac- +-----tttgcaggcatttcctccgtcctgtcaaattagtgcttaccaccagctagctgaggagctgggccac +cgaccagccccggttgctgctgtactgccaccttgccctgagcttgaacagggtctactttatatgccacaa +gagcttacagtgtctgatagtgttcttgtttttgagctcacggacatagttcattgtcgaatggcggcccct +agtcagcggaaagccgtcctttcaacactcgttggcaggtacggtcgccggactaagctgtatgaggcggca +cattctgatgtccgtgagtctttaggaaggttcattcctactattggaccagttcaagctaccacatgtgag +ttatatgaattagtggaagccatggtcgagaagggccaggacggttctgctgtgttagagctcgacctctgt +agccgtgatgtctcccgtattacattcttccagaaggactgtaataaatttacaacaggtgagactatcgcc +cacggcaaggtgggccagggtatctcggcctggagtaagactttttgtgctctatttggaccatggttccgt +gccattgagaaggagatcttggccctgctcccgcctaatattttctatggtgatgcttttgaggagtcagtg +ttctctgcggccattgccggggcgggctctagcatg---gtcttcgagaacgatttttccgagtttgacagt +actcaaaacaatttctccct------------------cggcctcgagtgtgtaatcatggaagagtgtggt +atgccccagtggcttatccgactgtaccatttagtcaggtcagcctggactttgcaggccccgaaagagtcc +ctgaaaggtttctggaagaagcactctggcgagcctggaacactcctctggaacactgtctggaacatggcg +atcatagcgcactgctatgagtttcgtgacctaagagtggcagcgttcaaaggagatgattcagtggtcctc +tgtagtgactaccgccagagccgtaatgcggccgccctgattgctggttgtgggttaaaattgaaggttgat +tatcgccccatagggttgtatgccggtgttgtggtggccccgggtcttggggcactccctgacgtcgtccgg +ttcgccggccggctgtctgagaagaattggggcccgggccccgaacgcgctgaacagttgcgtttggcagtc +tgtgacttccttcgaaggttgacgaatgttgcgcaggtctgtgttgatgttgtgtcacgtg-------ttta +cgaggttagtcctgggctggtacataaccttattggcatgctacagactattgccgatgggaaggctcattt +tactgagactgttaaacctgtactcgatcttacaaactctatcatacagaggttggaatgaataacatgtt- +g----------------tgtgcatcgcccatggg------------atcgccatgcgccctcgggctgttct +gttgctgttcttcgtgtttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaacccggggctggagctcgtcctc +gacagccgccccg---------------ccccctcggttcctcttggcgcgaccagtccca----------- +------gcgcccccccgctgccgcccgccgtcgatctacccca---------actggggctgcgccgttaac +agctgtctcccctgcgcctgacacagttccggttcctgatgttgattcccgcggtgctatcctgcgccgcca +gtataatttgtctacttctcctttgacctcctctgttgcttctggcactaatctcgttttgtatgctgcccc +gcttaaccctcttttacctctccaggatggcaccaacactcacatcatggcgactgaggcgtctaattacgc +ccagtaccgggttgttcgggctacaatccgctaccgccctttggtgccgaatgctgttggaggctatgcaat +ttctatttctttttggcctcagaccacaactactcccacctctgtcgatatgaactccatcacctctactga +tgttaggattttagttcagcccggtatagcctccgagttggttattccgagtgagcgcctccattatcgcaa +ccagggttggcgttctgttgagacctcgggtgtggccgaggaggaggcgacatcaggtctggttatgctctg +tattcatggctctcctgtaaactcttacactaacacgccctacactggggcattaggccttcttgattttgc +acttgagcttgaatttagaaacttgacccccggtaacactaacacccgtgtttcccggtacactagcacggc +tcgtcaccgtctgcgccgtggcgctgacggaactgctgagctcacgaccactgcagccacgcgcttcatgaa +ggacttgcacttca---ccgggacgaat---ggcgtcggtgaggtgggccgtggtatagccctaactttatt +caaccttgttgacacacttctcggcggtttgccgacagaattgatttcgtcggccggaggtcagctctttta +ctcccgtccagtcgtctcggccaatggcgagccggctgttaaattatacacttccgtcgagaatgcacagca +ggataagggtattgccatacctcatgatatagacctgggtgactcccgtgttgtcatccaggactacgataa +ccagcatgagcaggataggcctaccccttcaccagccccgtcacgccccttttcagtcctccgtgccaatga +tgtcctgtggctctc-----------------------------tctcactgctgctgagtatgat------ +caaaccacctatggttcgtcgaccaaccctatgtatgtttcagacactgtcactcttgt---caatgtggca +acgggggctcaggctgtcgcccgctccctagattggtctaaggtcaccctggacggtcggccccttaccact +at-----ccagcagtactctaagacattttatgtgc-tcccactccgtggcaagctttcattttgggaagct +ggcactactaag--gctgggtacccctataattacaacactaccgctagtgatcaaattctgatagagaacg +cggccggccac------cgtgttgctat-atctacttataccactagccttgg--------------agctg +gcccagtctctgtttc-tgcggtcggcgttcttgctccccattctgctctagccgtgcttgaagacaccatt +gatt---------accccgctcgtg----ctcacacttttgatgatttttgccctgaatgccttaatc---t +tggtttacagggctgtgctttccaatc--------caccattgctgaacttcagcgcct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-ttt---ca-t--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH184583.1/17160/1-7160 |Hepeviridae strain HEV_493, complete genome +-------------------------------gacca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggctaactccgccttggcgaatgctgtggtggtccggccgttcttgtcccgtactcagactgaaatcct +tatcaatctgatgcaaccccggcagctcgtgttccgtcctgaagtcttgtggaatcacccgatccagcgagt +tatacacaatgaactggagcagta---ctgccgtgctc-gcgctggacgttgcctggaagtgggggctcacc +cgagatctattaatgacaaccccaatgtcctgcaccggtgtttccttcgcccggttgggagagatgtgcagc +gttggtactccgcccctacccgcggcccagcggctaactgccgccgctccgcactacgtggcctaccccctg +tcgaccgtacctactgcttcgacgggttctcccgctgcgccttcgctgccgagactggaattgccttatact +cactacacgacctttggcctgcggatgttgcggaggccatggcccgccatgggatgacacgcttgtatgcag +ccctccattta-cccccagaggttctgctaccgcctgggacttaccataccacttcttatctgttgattcac +gatggcgaccgcgctgtcgtaacttatgagggggacaccagtgccggctataaccatgacgtgtccattctc +cgcgcatggattcgcacaactaagatagtcggtgatcacccgctggttatagagagggttcgtgctattggc +tgccattttgtgctgctcctcactgctgctcctgaaccatctcctatgccttatgtcccgtaccctcgctca +acagaggtgtatgttaggtctatatttggccctggc---------gggtcaccttctctcttcccatcagcc +t----------gctccaccaaatcca-catttcatgccgtcccggtccatatttgggaccggctcatgcttt +tcggcgccaccttagacgaccaggccttttgctgctcgcggcttatgacctatctccgcggaatcagttaca +aagtgaccgttggggcactcgtcgccaacgaaggctggaacgcctcagaggatgcgctcactgctgtgatca +ctgcagcgtatctgactatctgccaccagcgctacctccgaacccaggctatatctaagggcatgcgtcgac +tagagatcgagcacgcccagaagtttatcactagactttatagctggctgtttgagaagtc---------cg +gccgtgactacatccccggccgccaacttcagttctatgcacagtgccgccgttggctctctgccggcttcc +atctagaccccagggtccttgtttttgatgaggcggtcccttgc---cgctgtaggagctttttgaagaa-- +----ggttgccggtaagttctgttgctttatgaagtggttagggcaaga------gtgtacctgtttcctgg +----------------agccggctgagggcttgattggtgactgtggc--------cacgacaatgaggcct +atgagggatctgaagtagatccagccgagcctgcccaccttgatgtctctgggacttatgcagttcatggcc +gccagcttgaggctctatatagggcgctcaatatcccacacgacattgcggctcgtgcatcacgcttgacag +ccaccgtagagctctctgctagcccaggccgtctagaatgccgtacagtgcttggaaataagaccttccgta +cctcaataactgatggtgcccaccttgaggtcaatggccc------------------------cgagcagt +atattttgacatttgacgactcccgtcaagcgatgggggctgggcctcatagtctcacatatgagctcaccc +ctgctggtctgcaggttagaatatcttct-------aatggtctagactgtactgctgtctttccc---ccc +ggcggggcaccaagtgccccaccgggtgaggttgcagctttctgcagcgccctatacagatacaatagattc +actcagcgacattcgctaactggcgggctgtggttgcaccctgaggggctcttaggtctgttcccccccttc +tcccccgggcatctttgggagtctgcaaatcccttttgtggtgagggcacactttatactcggacctggtcc +acatctggcttctcgagtgacttctcccctcctgaggcggcttttgccgccccagcctcctgtgg----agg +gctgcctccgggcaccccttcctctgtcagtgatgt-----------------ctgggtgct---------- +---------tccgccaccc----tctgaggggt--------------cagtggttgctccgccgcctacagc +cccggt------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------------------------tagtaagcctaccagcccgcctggc +cccgctatacccagg-------------------------------------ccccccgtttgtaagccatc +ttcaccgcc--------------------------------------accggctcgtacccgccggc----- +-------------------ttctttatacttacccagatggagctaaggtctatgcaggctccctgtttgag +tcagactgtgactggttggtcaacgcatccaatcctggtcaccgccccggtggcggcctctgtcacgccttc +tatcagcgcttcccggagtcgt------tccacccgaccgattttattatgcgcgaggg---cctcgccgcc +tacaccttgaccccacgcccgatcatccatgctgtggcccctgattatagggttgagcagaaccccaagagg +ttggaggcggcgtaccgtgagacctgctcccgtcttggtacagccgcttacccactgttggggtctgggatt +tatcaagtccctgtgggtttaagctttgacgcctgggagcgtaatcatcgtccgggcgacgagctttacctc +accgagcccgctgctgcg-------------------------------------------------tggtt +tgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------accagccttaactataactgaggacgctgc +tc------------gcacagctaatctcgcgcttgaaattg------------actctgccaccgaggtggg +ccgtgcctgc---actggctgtactgttagccctgggattgtccattaccagttcactgctggggtacctgg +ctccgggaagtctagatctatacaacaaggggatgtcgatgttgtggttgtgccaacccgtgagctccgcaa +tagctggcggcgtcgtggctttgccgctttcacaccccacacggcggcccgtgttacagccggccggcgtgt +tgtgattgatgaagcaccttctcttccgccacatttgctattgctccatatgcagcgagcgtcgtcggtcca +tcttctcggcgaccccaaccagatccctgctattgattttgagcatgcaggtctggtcccggcgattcgccc +agagcttgccccaactagttggtggcatgttacacatcgttgccctgccgacgtgtgcgagcttatacgtgg +ggcttaccccaagattcaaactaccagccgtgtgatgagatccttgttttggaatgaa------cctgcagt +aggccagaagttggtcttcacgcaggcagctaaggcagctaaccccggtgcaattactgttcatgaggccca +gggcgctacttttactgagactaccgttatagctacggccgatgccaggggccttattcagtcctctcgtgc +gcatgcgattgtcgcacttacccgtcatacagaaaaatgtgttattttggacgcccctggcctgctgcgtga +ggttggtatctctgatataattgttaacaatttc------------------------------tttctggc +cggcg--gtgaggtgggccaccatcgcccttctaccataccccggggcaatccagaccagaatctagacac- +-----cttgcaggcattccctccatcttgtcaaattagtgcttaccaccagctagctgaggagctaggccac +cgaccaactccagtggctgctgtcctaccaccctgccctgagctcgagcagggtctactttatatgccacaa +gagctcacagtgtccgatagtgttctggtttttgagctcacggacatagttcattgccgaatggcggcccct +agtcagcggaaggccgtcctctctacgctcgtcggcaggtacggtcgccgaacgaggctgtatgaggcggcg +cattccgacgtccgtgagtctctagcaaggttcatccctactatcggaccagttcaagccaccacatgtgag +ttgtatgagttagtagaagccatggttgagaagggccaggacggttctgctgtgttagagcttgatctttgt +agccgcgatgtctcccgtattacattcttccagaaggactgtaataaattcacaacaggcgagactattgcc +cacggtaaagtgggccagggtatctcggcgtggagtaagaccttttgtgctctatttggaccgtggttccgc +gccatcgagaaggagattctggccctgctcccgcctaatatcttctatggtgatgcttttgaagagtcagtg +ttctctgcagccatcgctggagcaggttctagtatg---gtctttgagaacgatttttccgagtttgacagc +acccagaacaatttttccct------------------cggcctcgagtgtgttatcatggaagagtgtggc +atgcctcagtggcttatccggctgtaccatttagtcaggtcagcctggactttgcaggccccgaaggagtcc +ctgaaaggtttttggaagaagcactctggtgagcctggtacacttctctggaacactgtctggaacatggcg +atcatagcgcactgctatgaatttcgcgacttgagcgtggcggcgttcaaaggagatgattctgtggtcctc +tgcagcgactaccgccagagccgtaatgcagccgccctgattgctggttgtgggctgaagctgaaggttgac +taccgccccatagggttgtacgctggtatagtggtggccccgggtcttggggcactacctgatgttgtccgg +ttcgccggccggctgtctgagaagaactggggcccaggtcccgagcgtgccgagcagttgcgctcggcggtt +tgtgatttcctccgaaggttgacgaatgttgcgcaggtctgtgttgatgttgtgtctcgcg-------ttta +tgaagttagtcctgggttggtacataaccttattggcatgctacagactattgctgatgggaagggccattt +cactgagactgttaaacctgtacttgatctcacaaactctattacacagaggatggaatgaataacatgtt- +g----------------tgtgcatcgcccatggg------------accgccatgcgccctcgggctgtttt +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaatccggggctggagctcgccctc +gacagccgccccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------gctggggctgcgccgttgac +tgctgtctctcctgcacctgatacggccccggtccctgacgtcgattctcgtggtgctattttgcgccgcca +gtacaatctgtctacttctcctttgacctcctctgttgcttctggcactaatcttgtcctgtatgctgcccc +gcttaatcctctcttaccacttcaagatggcaccaacactcacatcatggcgactgaggcgtctaattacgc +ccagtatcgggttgtccgggctacaatccgctaccgccctttggtgccgaatgctgttggtggctacgcaat +ttctatctccttctggcctcagaccacaactacccccacctctgtcgatatgaattccatcacttctactga +tgttaggattttagttcagcctggtgtggcctctgagttggttatcccgagcgagcgcctccattatcgcaa +ccagggttggcgctctgttgagacctcgggcgtggccgaggaggaggcgacatcgggtttggttatgctctg +tattcatggctcccctgtaaactcttacaccaatacgccctacactggagcattgggccttcttgactttgc +acttgagcttgaatttagaaatttgacccctgggaacaccaatacccgtgtctcccggtacactagcacggc +tcgccaccgcttacgccgtggagccgacggaaccgctgagcttacgaccactgcggccacgcgtttcatgaa +ggacctgcatttca---ctgggacgaat---ggcgtcggtgaggtgggccgtggtatagccctaactttatt +caatcttgctgatacacttctcggcggcttgccgacagaattgatttcgtcggccggaggtcagctctttta +ttcccgcccagttgtctcagccaatggcgagccggctgttaaattgtatacttctgtcgagaatgcacagca +agataagggcattgccatacctcatgatatagatctaggggactcccgcgtggttatccaggattatgacaa +ccagcatgagcaggataggcctaccccctcgccggccccgtcccgccccttttcagtccttcgtgctaatga +tgttttgtggctttc-----------------------------tctcactgctgctgagtatgac------ +caaaccacctatggctcgtcgaccaatcctatgtatgtctcagacactgttacttttgt---taatgtggct +acgggagcccaggcagtcgcccgctcccttgactggtctaaggtcaccctggatggtcgaccccttaccact +at-----ccagcagtattctaagacattctatgtgc-tcccactccgtgggaagctctcattctgggaggct +ggcaccacaaag--gccgggtatccctacaattataacaccactgctagtgatcagattctgatagagaatg +cagccggtcac------cgtgttgccat-atccacctataccactagccttgg--------------cgctg +gcccagtgtctgtttc-tgcggtcggcgttcttgccccccattctgctttagctgtgcttgaagatactatt +gatt---------accccgctcgcg----cccacacttttgatgatttttgccctgagtgccgcaacc---t +aggcctacagggctgtgcttttcaatc--------cactgttgctgaacttcagcgtct------------- +--------taagatgaaggtaggtaaaacccgggagtcttaattca-tt----------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH184584.1/17219/1-7219 |Hepeviridae strain HEV_557, complete genome +-------------------------------gacca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccaccagtttatcaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggctaactccgccttggcgaatgctgtggtggtcaggccgttcctatctcgtactcagacagatattct +tatcaatttgatgcaaccccggcagctcgtattccgccctgaagttttgtggaaccacccgatccagcgagt +catacataatgagctggagcagta---ctgccgtgctc-gcgctggccgctgcttggaggttggggctcatc +caagatctatcaatgacaaccctaatgttttgcaccggtgctttctccgtccggttgggagggatgtgcagc +gctggtattctgccccaactcgtggcccagcagccaactgccgtcgctccgcgttacgtggtttaccccctg +tcgaccgtacctactgttttgatggattttcccgctgtgcctttgccgctgagactggaattgccttatact +cactgcatgacctctggcctgcggatgtcgcggaggctatggcccgccatgggatgacacgcttgtatgcag +ccctacatcta-ccccctgaggtcctgctaccacctggcacttaccacaccacctcttacttactaatccac +gacggcaaccgcgcggtcgtgacctatgagggggatactagtgctggctataaccatgatgtgtccattctc +cgcgcatggattcgtacaactaagatagttggtgaccatccgctggtcatagagagggtccgtgcaattggc +tgccatttcgtgctgctcctcactgctgcccctgarccatctcctatgccttatgtcccataccctcgttca +acagaggtgtatgttaggtctatattcggccccggc---------gggtcgccttctctttttccatcagcc +t----------gctccaccaaatcca-catttcatgctgtcccagttcacatctgggaccggctcatgcttt +tcggcgccaccttagatgaccaagccttttgttgctcgcggcttatgacttatcttcgtgggattagttata +aggtgaccgttggtgctcttgtcgccaacgaaggctggaacgcctcagaggatgcgcttactgctgtaatta +ctgcagcgtacttgactatttgccaccagcgctaccttcgaactcaagctatatctaaaggcatgcgtaggt +tagaagtcgagcacgcccagaagtttattactagactctacagctggctgtttgagaagtc---------cg +gccgtgactacatccctggccgccaacttcagttctatgcgcagtgccgtcgctggctctctgccggcttcc +atttagaccctcgagttctagtctttgatgaggcggttccttgt---cgttgcaggagctttttgaagaa-- +----agttgctggcaagttctgctgctttatgaagtggttgggacaaga------gtgcacttgctttctgg +----------------agccggccgagggcttgatcggtgactgtggc--------catgataacgaggcct +atgaaggttccgaggtagaccctgccgagcccgtccaccttgatgtctccgggacctacgcagttcacggcc +accagcttgaggctttatataaggcgctcaatatcccgcatgatattgcggcccgtgccgcacgcctgacgg +ccaccgtggagcttgccgctagtccaggccgccttgagtgccgcaccgtgcttggaaacaagaccttccgca +cgtcaataacagacggcgcccacctagaggttaacggccc------------------------tgagcagt +atgttttaacatttgatgattcccgccaagcgatgggggctgggccccatagtcttacttatgagctcaccc +ctgctggcctgcaggttaagatatcttcc-------aatggcctagattgtactgctatcttcccc---cct +ggcggggcgccaagcgccgcaccgagtgaggttgcagccttttgcagtgctttatatagatacaacagattc +acccagcgccactcactgaccggcgggctgtggttgcaccctgaggggctcctgggtctgtttccccccttc +tcccccgggcatctctgggagtccgcaaatccattttgcggcgagggtacactttatactcgaacctggtct +acatctggtttttcyagtaatttctccccccctgaggcggcttttgccgcccctgcccccgatgg----ggg +cttgcccctaggcaccccctcctctgttagtgatgt-----------------ctgggtcct---------- +---------tccaccgcct----tctgaggggt--------------ctgtggctgcttcgttgcctgcagc +cccggt------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------------------------tagtaagcctgctagtccgcctagc +cctgccacacctagg-------------------------------------ccccccgttcgtaagctgcc +ttcaccgcc--------------------------------------accggcccgtacccgccggc----- +-------------------tcctctacacttacccagatggggctaaggtttatgcgggctctctgtttgag +tcagactgtgattggctggttaacgcgtccaaccctggtcaccgccccggcggtggcctctgycatgctttc +taccagcgcttcccggagtcgt------tttacccgaccgattttgtcatgcgcgaggg---cctcgctgcg +tatactttgaccccacgaccaatcattcatgctgtggcccctgactatagggtagaacagaaccctaagaga +ctggaggcggcgtaccgtgagacttgctcccgcctcggtactgctgcttacccattgctggggtcggggatt +taccaagtccctgtgggtttgagttttgacgcctgggagcgtaaccatcgcccaggtgatgagctctacctc +accgagcctgctgccgcg-------------------------------------------------tggtt +cgaggccaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccctaacgattactgaagatactgc +tc------------gcacggctaacctcgcgctcgagatcg------------actcagccaccgaggtggg +ccgtgcttgt---accggctgtactgtcagccctggaattgttcattaccagtttactgccggggtgcctgg +ttctgggaagtctaggtctatacaacaaggcgatgttgatgttgtggttgtgccaacccgcgagctccgcaa +tagctggcggcgccgcggttttgccgcttttacaccccacacggcggcccgtgttacagccggtcggcgtgt +tgtgattgatgaggcaccttcgctcccgccacatttgctcctgcttcacatgcagcgagcttcttcggtcca +ccttctcggcgaccccaaccagattcccgccattgacttcgagcatgcaggcttagtgccggcgatccgccc +tgagctagccccgactagttggtggcacgtcacacaccgttgccctgccgacgtgtgtgagcttatacgcgg +ggcttatcctaagattcaaactactagccgtgtgatgcgatctctgttctggaatgag------cctgcggt +gggccaaaagttggtcttcacgcaggcagctaaggcagccaaccccggcgcaattactgtccatgaggccca +aggcgccacatttacagagactaccattatagctacggctgacgctaggggccttatccagtcctcccgtgc +gcatgcaattgtcgcacttactcgccacacggagaagtgtgtcatcctggatgcccccggtctattgcgtga +agtcggcatttctgatataattgtcaacaatttc------------------------------tttttagc +cggtg--gcgaagtaggtcaccaccgtccttccaccatacctcggggcaacccggaccggaatttagatac- +-----cttgcaggcattccctccatcttgccaaattagtgcctaccaccagctagctgaggagctgggccac +cgaccggccccagtggctgccgtactaccaccttgccctgagcttgagcagggcctactttatatgccacaa +gagctcacagtgtccgatagtgttttggtttttgagctcacggacatagttcactgccgaatggcggctcct +agccagcggaaggccgttctttcaacgctcgtcggcaggtacggccgccgaacgaagctgtatgaagcagct +cattctgatgtccgtgagtctttagggagatttatccctaccatcgggccagttcaggccaccacatgtgag +ctgtatgagttagtggaggctatggttgagaagggccaggacggctctgctgtgttagagcttgacctttgt +agccgtgatgtctcgcgcattacgttcttccagaaggattgtaacaaatttacaacaggtgagactatcgcc +catggcaaggtgggccagggtatctcggcttggagtaagaccttctgtgctctatttggaccgtggttccgc +gccattgagaaggagatcctggcccttctcccacctaatattttctatggtgatgcttttgaggagtcagtg +ttctctgcagccatttctggagcgggttctagtatg---gtctttgagaatgatttttctgagtttgacagc +acccaaaataatttttcact------------------aggccttgagtgtgttatcatggaagagtgtggc +atgccccaatggcttattcgattgtaccatttagtcaggtcagcctggactttgcaggccccgaaagagtcc +ttgaaaggcttttggaagaagcactctggcgagccaggtactctcctctggaacactgtctggaatatggca +atcatagcacattgttatgaatttcgtgacctgaaagtggcagcgttcaaaggggatgattcggtggtcctt +tgtagcgactaccgccagagtcgtaatgcggccgccctcattgctggttgcgggctaaagctgaaggttgac +taccgtcctatagggttgtacgccggtgtcgtggtggccccgggcctcggggcactccctgacgtcgtccgg +tttgccggccggttgtctgagaagaactggggcccgaatccagagcgcgctgaacagttgcgcttggcagtt +tgtgatttcctccgaaggctaacgaatgttgcgcaggtctgtgttgatgttgtgtcccgtg-------ttta +tggggttagccctgggttggtacataaccttattggcatgctccagactattgccgatgggaaggcccattt +tactgagactgtcaaacctgtgttggatcttacgaattctatcatacagaggttggaatgaataacatgtt- +g----------------tgtgcatcgcccatggg------------atcaccatgtgccctcgggttgttct +gttgctgttcctcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--attgattctcagccctttg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgccgatgtcgtatcacaatccggggctggaactcgccctc +gacaaccgccccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------gctggggctgcgccgttaac +cgctgtctctcctgcacctgacactgctccagtccccgacgttgattcccgcggtgctattttgcgccgcca +gtataatctatccacttctcctttaacttcttctgttgcttctggtactaatcttgttctgtatgctgcccc +gctcaatcccctcttacctctccaggatggtaccaatactcatatcatggcgactgaggcgtctaattacgc +ccagtaccgggttgtccgggctacaatccgttaccgccctttggtaccgaatgctgttggcggctatgcaat +ctctatctccttctggccccagactacaaccacccccacctctgtcgatatgaattccatcacctccactga +tgttaggattctagtccagcccggtgtggcctctgaattggtcatccctagcgagcgcctccattaccgtaa +tcaaggctggcgttctgttgagacttcgggtgtggccgaggaggaggcgacatcgggtttggtaatgctttg +catccatggttctcctgtcaattcttatactaatacgccctacaccggggcgttggggcttcttgactttgc +acttgagcttgaatttcggaacctgacccctgggaacactaacacccgtgtgtcccgttatactagtacagc +tcgccaccgcttacgccgtggcgccgatgggactgctgaactcacgaccactgcagccacgcgctttatgaa +ggacctgcatttca---ccgggacgaac---ggtgttggagaggtgggccgtggcatagccctgacattatt +caatcttgctgatacacttctcggcggtctgccgacagaattgatttcgtcggccggaggtcaactctttta +ctcccgcccagtcgtttcagccaatggcgaaccaactgtcaaattatatacatccgtcgagaacgcacagca +ggacaagggcattgccataccacatgatatagatctaggagattcccgcgtggttatccaggactatgataa +ccagcacgaacaggataggcccaccccttcgccggccccatctcgccccttctcggtcctccgtgctaatga +tgttttgtggctttc-----------------------------tcttactgccgctgagtatgac------ +cagaccacttatggttcgtcgaccaatcctatgtatgtttcagacactgtcacctttgt---taatgttgcc +acgggagcccaggctgtcgctcgctcccttgactggtctaaggtcacgcttgatggtcgacctcttaccacc +at-----tcagcagtactctaagacattctatgtgc-tcccactccgtgggaagctttccttttgggaggct +ggcaccactaag--gccgggtacccttataactataacaccactgctagtgaccagattctgatagagaacg +cagccggtcat------cgtgttgctat-atctacctatactactagtctcgg--------------tgccg +gtccggtgtctgtctc-tgcggttggtgttcttgctccgcattctgcattagctatgcttgaagatactatt +gatt---------accccgctcgtg----cccatacttttgatgacttttgtcctgagtgccgcaatc---t +tggcctacaaggttgtgcttttcaatc--------tactattgctgaacttcagcgcct------------- +--------taaagtgaaggtaggcaagacccgggagtcttaattaa-ttt---tg-tcct----------gt +gccc-cct--------tc-ttgg-tt-tt----gc-tt-ta-------------------tt-t-------c +tttcttct----gcg----------------ttccgcgctccc----------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MG813927.1/16942/1-6942 |Hepeviridae strain LCK3110, complete genome +----------------------------------------------------------------gcaacccc +c--gatggagacccatcagtatgtcgccgccacgggggttaatactgctagggaggcccaggccactgcggc +agcggcta---ccgcctttgctaatgctcaggtggttcgcccctacttgtcgcattctcaagcttccctgct +tgttgagcttttctcccctttgcagcttgtctttgagcccgctgtttcttggtcgcatccggtacagcgtgt +tattcataattttctggaggcgta---cgtccgccgca-aggctggcgcttgcctggaggtcggtgcgcacc +ctaggtctattaatgagcacgccaatgtcattcacagatgttttctcccgcctgacggtagagatatgcagc +gttggcgagattgcccgcggcggggcccagctaacaacatccgccgttgcattcttacggggcgcccggcta +ctgatctttccttttgcacgaatggattccagcgctgtcgccattatgccgatgtgggaatcgcgctgtatt +ccctgcatgatttacatccgcgtgaggttgcccgggcaatgcgtgctcatggaatgcacactctatatgctg +tgatgcattta-ccggcagaggcgcttctgccagacggggtgtacacaactcgtgcctatacagcgcgcaat +ttggaggggcgcctgattgtcacctatgagggagacacatcggcagggtacaaccatgaccgtaaatccatc +aggtcctggattaaggcgaccagagtgcgcggctgctgcgccttggttatagagcgggttagggccgtgggc +tgccattttgtcctgcgcctaaccacagtggccaacccgtgccctatgccatacaccccctaccctaggtca +actaccatctatgtgcgcagcttgttcagcgccggcactcaggcggggcctctgggccccccccccctgatg +tgcgagaagt-------ctaggtcaa-ctttccattgcgtcccaactgatatctgggataggcttatgctat +ttggggccacgctggatgatgaagccttctgctgcagccgcctcatgacctacctgcgcgggatctcgttca +aggttactgttgggacggttgttgcaaatgaaggctggaccacagatgagtacgctctcactgctgttgttg +tggcatcctacctcacaatctgccatcagcgctggatccgcacgcaaggtatatcaatgggcattaaacgcc +ttgcaaaagaacatcaacaaggtcttctcttccggctcggcgagtggctcctgactaagatctgtgggcccc +gtgagacgtttgtaccggggaggcaattgcaattctataggcagtgcagagactgggtttcggcagggtttt +atatcgacctcagagatctctgtttcgatcgagagtacgcctgc---ccctgcctcccccttgagcacac-- +----cattcgcaaaggctgcaactgtgttgcgcgaaaactgaggcaggt------gtgcggttgtttcatga +------------------------------------------------------cagacgcaatcgagtccc +tggaagactctacagaggaccttacag--------------------------------------------- +---------cggacttctacccaaaacccgatgt-------------------------------------- +--------atacataccacaaggactggacaattgga------------------caataagggcccttaca +gactgtctgtttaaggc-----------------------------------------------tggggacc +gtgcgctg---------------------------------------------------------------c +atgccggtatgaagttggcaggctggccc--------------cgaattgggctggcgttctttctctctcc +tgtgg--------gcctagtttttagtggggagccggcgcccgga--------------------------- +-------------------cctccaggtcgtcgaatggagccgggtccgttctggggcgatgcccccccttc +ccccccaccatcggatgaggattacccgtaccatactcctgtgag--------------------------- +-----------cccggatggccctcccccaccag------------cttcctggacacccggccc----aat +atcccctcggtatacactcccaac--------------------accgg----ttgagtaccga--g----- +---------gccacagacctgggtcagcggggt------------tctgggaggcgactcccgacccctccc +ccgag------------------------------------------------------------------- +--------------------------------------------------------gtg------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ccactgagtcggc------attcatc +tctccagagtgttgacctt---------------------------------gccccgccgcgcaacccgcc +ggtcgcgcc-----------------agttcagaga-----------gtgttgctggacttgctgcc----- +-----------------------------------cgatggtgcagccgtttatgagggggacctatttagc +tcagactgctattggctggtcaacgcggccaacccccagcatgcgccaggtggaggcatatgtggggtcttc +tttaagcgctatccggaggcgt------tcgatcggacccagttcattcaccccaacggggcgcaggcggcc +tataccgttatacccaggccgataatacacgccgtcgcgccggattatagggtccgccaagaccgggcggcc +ctacaggccgcctaccaggaatgcctgtaccggcaggaacgggcggcgtattgccttctcggaagcggaata +tatcaggtgcccccacaggagtccatgcaggcttggttagacaaccatttacctggagatgagatgtacat- +actgccttcgttgtcaccatggtacaggtcgtggcgcgctggggcgggggccggccgcggaggcgggtcgcg +ggagggtgttggccccccccccccttcctc---------------ttccacccccgccggtgaccgcgaggc +cacgcccg---------------------------cggccccacctgcgccaagccgaattctagttgtcac +ccctaatttggcaaacacggccaatctggcattgcagcaagaggcagagggccccttcgcaaagtttattgg +caatgcccac---------------gttccccccggcccggtgaaatataggtttgtggccggtgtcccggg +ctcggggaagtctgtcggggtgcgcaagcaggactgtgacctggttattgtacccaccaaccagcttaaggc +tcagtggcgggcgagaggtttccccgtaatgaccccgcatgttgggttacaacattgccaagggaagaggtt +ggttgtggacgaggctccagcgcttcccccacacctgctgctgtgttacatgacagccgccgctgatgtttt +gctcttgggggacccccggcagatcccggcaatagactttgagagcaaggggcttatccctgccatgcagtt +gaatttagaacccacagaatggcgcctgcagtcccaccgctgcccgcgggatgtgtgttatctcctgtccgc +ggattacccagggatgtctaccacaaacccaattgttagatcgttgatgttcaccggg------gacagtgc +tggacaggtgctggtgtttactcaagcggccaaggccatgcaccctggctcgatcactgtccatgaggccca +ggggagtaccttcaataccactaccatcgtggtgactaatgacgcacgcggccttctggcgtcgtcccgagc +ccactgtatagtggctttgactaggcatacagataagtgctacatcttggatggccctggattgctgaggga +gcttggcgtcacagattccattcttaataatttt------------------------------tatctgac +ccagc--ctgtggaggttcaagcgcggcccgcagcggttgagcgggccgagaagtgcgaaaacttgcagga- +-----cattgatatggtccctcctgccccccctgatgtggccttgcaccagatggctgaggctttcggccac +agacccctggaggttcgggcggtggtgcccctctgccccccgctcgagcagggaaaactttacacccctttt +aatttggcaggtcgagatcaggtaaccgtattggctttatcctccacggtgcactgccgtatggccgccccg +gcccatagattggctgttttgtccacacttgtggggcgatatgggaaggagacaaaattgtggcacgacgat +gtagaagcagtgcgagagtcgctaagagccctgataccatccatctcaggtgttaaagtgacctcgtgtgag +ttgatggagctagtcgaggcaatgattgcccgcggccaggacggcactgccgttctagatttggacttttct +gataaggcatgcacaaggataacctttttccagaaggactgcaacaaattcactacagacgagccagtgcag +catggtaaggttggtcaggggatatcagcatggtctaaaacgcttgtggcgctgtttggcccctggtttcgg +gccatagagaaggccatagtcgccaacctgcccgagtggtgcttttatggtgactgttatgtccaggagaag +tttgaggccgccgtagcaggagcgaaagcgtgcaga---gtgtttgaaaatgattttagtgagttcgatagc +acccagaacaactattcgct------------------gggtctggagtgcctgctgatgaaagaagcgggt +gcaccggaatggttgtggaggctttaccaccttttgcggtctgcatgggtgctacaagccccgcaagagggc +ttgcggggcagatggaagaagcattcaggggaaccaggtacgttgttatggaacactgtctggaatatggcc +gtgatactgcactgctatcagtttgatggtctggctgtagctgccttcaaaggggacgactctgtggtgtgc +tgtcggttttatcagcagaggccccaggcagccgccctcatcacaggttgtggtcttaagctcaaggtcaat +ttcggggacgtcgggtcctatgcaggtttgctcgttgcctgcgggcttggtgtgacgcccgacgttgtcagg +tttctgggaagaatatctgagaagaattggggccccgtgaaagagcgcaaggaggaccttgagcaggctgtg +cgagatttcgtcgcgaagctgagaaatgtcac-tgccctttcgtgtctgttggccacgagg------tttta +taagctggaaccggggcttgccctcaatgcggtcgccgggcttaaggcgattgctgaggggcggatggaact +caaggaatacacctggcctgt----------------tttacagttggaggggaagaaggaataacactct- +------gggc-------tgtagcatgtgcgcgaaa--------tg-------------tctgtcgttgtcgt +gctcgtgcttttgctgttcgtgccgctgttgtctgcggccccaa-------------------------tgt +accccggagggccccggggcgctggcgggcc------------gcggcgagggacacgtgcagatgcagccc +tg--------------------------------tctcaccc-------agccctccccccaacccagctta +ccaactggctatcaccaaccaacccttttgccgccga----------------------------------- +----gctctcccg---------tgtgcccccacttgggtccgcatgggtcgaccggcgccg----------- +---------------cggcggctcccgccgccgccctgcctcagtacccgatgccgggcagccgccaatgac +cgcgcaggcccccgcgcccaataccgcacctgtccctgatgtggatagccgagggtccatcctccgtcggca +atataatttgtccacgtcaccgttgaccctgactgtccctcagtcctctaactccatcctgtatgctgcgtc +gttgaatccgctcctgcccttgcaggacggatccaacacgcacattatggcgactgaggcttctaattacgc +ccaatatagggtccaggcggccacattgaggtttcgtcccctggtccccaactcggttgggggttatgcggt +gtcgatgtcattctggccgcagtccaccaccgttccgacatcggttgatatgaactccatcacgtccaccga +tgtgcggattgtggcccagccaggcttggccgccgagctggtcatcccaaaggagcgcctgcactatcgaaa +ccaaggctggcgctccgtggagacaaattcagtgccacaggaggagtctacgtccgggatgctgatggtctg +catccacggcgcacctatcaattctttcaccaataccccttacacgggggctctgggcctgctagatatcgc +ccttcaggtggagtataggaacctgacacccggtaataccaacactcgtgtgaataggttccgcaccaccgc +cccccataagataaagcgcctgcctgatggcacggcgcagatctcaactgcatctgctgtcaggttcatgca +ggacgtgcacctgg---cgggcaataat---ggtgtaggtgatataggtaagggtattgttcaggttttgtt +caatattgcggataccctgttaggcggcctgccaacggaccttgtttctaacgctgggggccaactgttcta +tggccgaccgcaggtgtctgagaatggtgaaccatcggttaagctttatacatctgtggaagccgcccagct +ggaccatggggttaccattccccatgatattgacttgggtgtgtccgccatcacactacaggactttgataa +ccagcatttgcaggaccgccctacgccctcaccagcgccagctcgcccgatcacgaactggcgctctggtga +tgtggtgtgggtcac-----------------------------attaccatcggccgaatatgcgcagtct +cagagcgcaatgggttc------ccacccggcctactggtccgaggaggcgactataat---caacgtcgct +acgggccaacgggccgccgtgtctagcataaagtgggatcaggtcactcttaacggcaaggccctgcataag +ga-----gactcattcaggcttggtttattaccagc-tgccattgatggggaagatcaatttttggcagcag +ggtaccaccaaa--gccggttatacttataattacaacactactgattcagacagtttgtgggtgtggtggg +atgggggctctaaggcttatctctatat-atctacttatactactatgctagg--------------tgctg +gacctgttaacatcac-ggggctgggtgctgtcggccccaaccccgtt-gatcaggcctcggctgcagtgcc +gatg---------------------------cataatctacaggatggctgcccagcctg-----------t +gctttggccgggctatcttcctgcctcgtggctgatgctatggcgcgagtgcaggcgttgtcagcc------ +----------------------gtagcagccgacagtgtctagtta-ttctt-tt-tcttgctt----tagt +atctctct----------------------------tt---------------a----tatc-t-------c +-ttttcct-----------------------ttctgctttccgcaagac-----------------aaaaaa +aaaaaaa----------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH809516.1/17214/1-7214 |Hepeviridae isolate NG/170500, complete genome +--------------------------aggcagacca-tatttg-------------t-----ggtcgatgc- +---catggaggcccatcagtttatcaaggctcctggcatcactactgctattgag---caggcagctctagc +agcggccaactccgccttggcgaatgctgtggtggttaggccttttctctctcatcagcagattgagattct +cataaatctcatgcagccccggcagcttgtattccgccccgaggtcttttggaatcacccgatccagcgtgt +catacataatgagctcgagcagta---ctgccgagccc-gctcgggtcgctgccttgaggtcggagctcacc +cgcgctctattaatgacaaccccaatgttctccatcgctgcttccttcgccccgtcggccgggatgtccagc +gttggtacacggccccgactagggggcccgcggcgagctgccgccgttcggcgcttcgtggtctgccaccag +ccgaccgtacctattgttttgatggttttgctggctgcagttttgccgctgagactggtgtggccctttact +ccctccatgatctacaaccggctgatgtcgctgaggctatggcccgccacggcatgactcgcctatttgcag +ccttccacctg-cccccggaggttcttctgccccccggcacttaccggacatcgtcttatctgctgatccat +gacggaaagcgtgccgtcgtcacttacgagggcgacactagtgcaggctataatcatgatgttgccaccctc +cgttcatggatccggacaactaaagtcgtgggtgagcaccctttggtgatcgagcgggtgcggggcataggt +tgccattttgtgctgttgattactgctgcccctgaaccttcaccgatgccctacgttccttacccacgctcg +acagaagtttatgtgcggtccattttcgggcctggc---------ggctctccatcgcttttcccgaccgcc +t----------gcactgttaagtcaa-cttttcatgccgtccccacccacatctgggaccgcctcatgcttt +tcggggccacccttgatgatcaggctttttgctgctctaggctcatgacctaccttcgcggcattagttata +aggtgactgttggcgccctcgttgctaacgagggctggaatgccactgaggacgcgctcaccgcagttatta +cagcggcgtacctcacaatttgccatcaacgttacctgcggacgcaggcgatttccaaaggcatgcgccggc +tcgagctcgagcacgcccaaaaattcatctctcgtctctacagctggttatttgagaagtc---------gg +gccgcgattacatcccgggccgtcagttgcaattttatgcccagtgccgccgttggctttctgccgggtttc +atcttgaccctcggaccctagtttttgatgaatcagtcacctgt---agctgccggactattgctcgacg-- +----gattgcagggaaattttgctgttttatgaagtggctcggccagga------gtgctcttgctttctcc +----------------agcctgctgaggggctggcgggcgaccagggc--------catgacaatgaggcct +atgagggctccgacgtcgaccccgccgagcccgccaccttggatatcacaggctcgtatatcgtggatggtc +aatccctccagactgtctatcaggcactcgacctgccgcttgagctggtggctcgtgccgcccgtctctctg +ccacggttgttgtcactgagacccccggccgcctagactgtcgaactgtaattggtaataaaactttcctca +cgaccttcgtagatggggcacgtcttgaagtcagtgggcc------------------------tgagcagt +taaatttatcttttgacagtcagcagtgcagcatggcggccggcccattctgcctcacttatgccgctgtgc +ctggcgggcttgaggtccgctttgccgcc-------gctgggctcgagagccgtgtcactttccct---tct +ggcgaagcaccaggcgccccacctggcgaggtcactgcgttctgctcagctctctacaggcataaccgatcg +agccaacgccagtcggttgtcggcggcctgtggctccatcccgagggcctgttgggtctgttcccgcccttt +tctcctgggcatgagtggcagtctgccaacccattttgcggcgagagtaccctttacacccgcacctggtcg +acggccactgactc---------------------gccgctagttgctgaccaggcctcgggctcagcagag +cttgtcgc-----------ccgcccgatagagccct---------ccat---------tgct---------- +---------gtcgcgggcc----ttgtaggggg-----------c----------------ccgcctggttt +tccag------------------------------------------------------------------- +----------------------------------------------------------g------------- +------------------------------------------------------------------------ +--------------------------------------------------------------------ccct +g---------------------------------------------gttctgcttctgttgctgtagacggc +ccccactcctccggg-------------------gc----------------ccacctggtcatacctaatc +cccgtggtg--------------------------------------ccccgc-----agcgccgcc----- +-------------------tactgcatacctaccctgacggcgccaaggtttatgttggctccattttcgag +tccgaatgtacctggcttgttaatgcgtcgaacgccggccaccgtcccggtggtgggctttgtcacgcattc +tatcaacgctaccctgactcgt------ttgatgccactaagtttattatgcgcgacgg---tctggccgcc +tacacccttactccccggccaattattcatgccgtcgcccctgattatcggcttgaacataacccgaggagg +ctcgaggccgcctatcgcgagacctgcgctcgtcgtgggaccgccgcctatccgctcctcggcgctggtatt +taccaggtgcctgttagcttaagttttgacgcctgggagcgaaaccatcgcccgtctgacgagctttacctg +actgagctggcagctaag-------------------------------------------------tggtt +cgaagctaaccgcccggatca--------------------------------------------------- +------------------------------------------tcctacgttgaacataactgaggacaccgc +cc------------gtgcggccaatctggccctggagcttg------------actccgagagtgaggtcgg +ccgcgcgtgc---gccggttgtaaagttgagcctggcttagtgcggtatcagttcacggctggtgtccctgg +ttcgggtaaatctaggtccgtgcagcaggcggacgtagatgttgttgttgtgcctacccgcgaactccgaaa +tgcctggcggcggcggggttttgcggcgttcacgccacatactgcggcccgtgttacgcgcggccgcagggt +tgtcatcgacgaggccccctcactccccccgcatttgctgctccttcacatgcagcgagccgcgtctgtgca +ccttcttggcgacccgaaccagatcccggccatagattttgagcatactggtctggtcccggccatacggcc +cgatttggcccctacctcttggtggcatgtcacccaccgttgccccgcggatgtttgcgagctgatccgcgg +cgcttaccctaagatacagaccacaagcaaggtgcttcgctccctcttttggggtgaa------ccggccac +cggccagacattggtgttcacacaagccgcaaaggctgctcaccctgggtcgataacggtccatgaggccca +gggtgcaactttcactaccacgaccataattgcgaccgcggatgcccgtggcctcatacaatcctcgcgggc +ccacgccatagtagccctcacacgacacactgaaaggtgcgtcatacttgatgcccccggcttattacgcga +ggtgggcatttcagatgccattgtaaataacttt------------------------------ttcctctc +gggtg--gtgaggctggccatcataggccgtcggtcatcccgcgcggcaaccccgaccgtaatgtcgatgt- +-----gctagctgcgttcccgccctcatgtcagataagtgcctaccatcagcttgctgaggagctgggccac +cggcctgtgccggtggcggctgtgctccctccttgccctgagcttgaacagggtctcctctatatgcctcag +gagctggcatcttgtgacagtgttgtaacattcgagcttactgatgttgtgcattgccgtatggcggccccc +agccagaggaaggctgttttatccacgctagtgggccgctacggtagacgaacaaggctttacgacgccgga +cataccgacgttcgtgcctccctcgggcgattcatcccaaccctcgggcaggtccgcgccaccacctgcgag +ctctttgagctcgtggaagcgatggttgagaagggtcaggatggttctgctgtccttgagctagacctgtgc +aaccgtgacgtctcccggataactttctttcagaaggattgcaataagttcacgactggggagacgattgca +catggtaaggtcggtcagggcatctcagcctggagtaaaactttttgcgccctgttcggcccgtggttccgt +gcaattgagaaggccatcttatctcttctcccacaaactgttttctatggggacgcctatgatgaatcggtg +ttctctgccgctgtggcaggtgcaggtcgtgccatg---gtgtttgaaaacgatttctctgagtttgactcg +acccagaataacttttcctt------------------aggccttgagtgcgctattatggaggagtgtggt +atgcctctgtggcttgtcaggctataccacgtcgttcggtcggcgtggatcctgcaggccccgaaggagtca +ctgaggggtttttggaagaagcattccggtgaaccgggtaccctactctggaatacggtatggaatatggca +atcatcgcccattgctatgagtttcgggacctccaagtcgccgcctttaagggggacgattcggtcgtcctt +tgtagtgagtaccgccagagtccgggcgccggcccacttatagcgggttgtggcttgaagctgaaggtagat +tttcggccgattgggctgtatgccggggttgttgttgccccggggcttggggccctacctgatgtcgtccgg +tttgccgggcggctctcggagaagaactgggggccgggcccggaacgggccgagcagctccgcctagccgta +caggattttctccgcaagctcacgaatgtggcacagatttgtgttgaggtggtgtctaggg-------tcta +cggcgtctccccgggcctggtgcataacctaataggcatgctccagaccgttggtgatggtaaagcgcactt +cactgagtctgtaaaacccatacttgatttgacccattcaattatacatcggattgaatgaataacatgtt- +----------------gtctgctgcgcccatgggc---------tcgtcaccatgcgccctaggcctcttct +gctgttgctcctcctgtttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggttc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----caatcccctatattcat---- +--------------ccaaccaaccccttcgccccagacgttgccgccgcggccgggtctggacctcgtcttc +gtcaaccagccag---------------accactcggctccacttggcgagatcaggccca----------- +------gcgccccgccgctgcctcccgtcgccgacctgccacc---------gctggggctgcgccgctgac +ggcggttgcgcccgcccatgatacctctcctgtccctgatgtcgactcccgtggggcgatccttcgccgcca +gtataatttgtctacgtcgcccctaacatcctctgtggcctctggcactaatttggttctgtatgccgcccc +tttaaacccccttctgccgctccaggacggcactaacacccatataatggccacggaggcttccaattatgc +acagtaccgggttgctcgcgctaccatccgctatcgacccttggtgccgaatgctgttgggggctatgcaat +atcaatatctttttggccccagactaccacaacccccacatctgtcgacatgaactctattacttctactga +tgttaggatccttgttcaacctggcattgcatctgagttagtcattcctagcgagcgcctccactaccggaa +tcagggttggccctcagtcgagacgtctggtgttgctgaggaagaggcgacatcaggtctcgtcatgttgtg +catacacggttccccggttaattcctacaccaatacaccctatactggtgcccttggtttactagattttgc +attggagcttgagtttcgtaatcttacccctggtaataccaacacgcgtgtgtcccgttattccagcacagc +ccgccaccggcttcgccgtggtgcagatggcactgctgagctgactacaactgccgctactagattcatgaa +ggaccttcatttta---ctggcctcaat---ggggttggtgaagttggccgtgggatagcgttaacattatt +taatcttgctgacacactcctcggcgggctcccgacagaattgatttcgtcggccggtggacagttgttcta +ctctcgcccagttgtctcagccaatgccgagccgacagtaaagctctatacatctgtggagaatgcccagca +ggataagggtgttgctatcccccatgacattgaccttggtgactcgcgcgtggtcatccaggattatgacaa +tcagcacgagcaggaccgccccaccccctcaccggcaccgtcccgtcccttttctgtcctccgtgcgaatga +tgtgctctggctgtc-----------------------------ccttactggggccgagtatgac------ +caatcaacatacgggtcgtcaaccggcccggtttatgtctcggatagtgtgaccttggt---gaatgttgcg +accggcgcgcaggccgttgcccggtcgctcgactggtccaaggttactcttgacgggcggcccctccctact +ac-----tgagcagtattccaagtcattctttgtgc-tgccccttcgtggtaagctctctttttgggaggct +ggtactacgaag--gcgggttacccctacaattataatactacagctagtgaccagattttgatcgagaatg +cagccggccat------cgagttgctat-ctcgacctataccaccagtcttgg--------------ggctg +gcccggtcgcaatttc-tgcggccgcagtcttagccccccgttcggccttggcccttcttgaggataccctt +gatt---------acccggcacggg----cccatacatttgacgatttttgccctgagtgccgtgccc---t +aggcctccagggttgtgcctttcaatc--------cactgttgctgagctccaacgcct------------- +--------caaggttaaggtgggtaaaactcgggagttatagttta-tttgg-ct---------------gt +gcccaccta-------tc-----tctattctttgc-ttctcttt--------------tatt-t-------t +ctatttct----gcg----------------tctcgcgctccctg---------------------aaaaaa +aaaaaaa---------------aaa----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MG783570.1/17239/1-7239 |Hepeviridae isolate DLS1311681, complete genome +--------------------------tggcagacca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcatcactactgccattgag---caagctgctctggc +cgcggccaactctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagctggttttccgacctgaagtgctctggaatcatcctatccaacgggt +tattcataatgaattagaacagta---ctgccgggccc-gggctggtcgctgtttagaggttggagctcacc +cgagatccatcaatgataatccgaatgttttgcatcgctgctttctacgaccagttggtagagatgttcagc +gttggtactctgcccctacccgtggccctgcggccaactgtcgccgctccgctctgcgtggcctcccccccg +tcgaccgcacttactgttttgatggattctctcgttgctcatttgctgcggagactggtgttgccctctatt +cactgcatgacctctggccggccgatgttgcagaggccatggcccgacacgggatgacacgcttatatgctg +cactacatctt-ccccctgaagtattactaccacctggcacctaccacacaacttcataccttcttattcac +gacggcgaccgtgccgttgtgacctatgagggtgacactagtgcaggctacaaccatgatgtttccatactc +cgcgcatggattcgcacaactaagatagtcggcgaccatccgctggtgatagagcgtgtgcgggccatcggc +tgccactttgtgctgctgctcactgcggcccctgagccgtcaccaatgccttatgtcccatacccccggtcg +acagaggtgtatgtccgctccatattcggtcctggc---------gggtccccgtctctgtttccgtcagct +t----------gctctacaaaatcca-catttcatgccgtcccagttcatatttgggaccggctcatgctct +ttggtgctaccttggacgatcaggcgttttgctgctcacggcttatgacttaccttcgtgggattagttaca +aggtcaccgtaggtgccctcgttgctaatgaagggtggaatgcttcggaggatgctctcaccgctgttatca +ccgcagcgtatttgaccatttgtcatcagcgttacctccgcactcaagctatatccaagggcatgcgccggc +tggaggttgagcatgctcaaaagttcattataagactatatagttggctgttcgagaagtc---------tg +gccgtgactatatccccggccgtcagctccagttttatgcacagtgccgccgctggttatcggcgggtttcc +atctcgatccaagggtgcttgtttttgatgagtctgcgccctgc---cgttgtaggacgtttcttaagaa-- +----ggctgcaggcaagttctgttgttttatgaggtggctggggcagga------gtgcacctgctttttgg +----------------aaccagctgagggcctggttggtgatcatggt--------cacgataatgaagcct +atgagggctctgagatcgaccaggccgagcccgcccatcttgatgtttctgggacttatgccgtccatgggc +gccaactcgaggctctgtacagggcgcttaacatcccgcacgacattgccgctcgagcctcccgtttaaccg +ccactgttgagcttgctgcaggcccagaccgtttggagtgtcgcactgtgctcgggaataagaccttccgaa +caacggtggttgacggcgcccatcttgaggcgaatggccc------------------------cgaacagt +atgtcctttcgtttgacgcctcctgccagtctatgggggctgggacgcataacctcacctatgaacttactc +ctgctggtctgcaggttaagatttcgtct-------aatggcctggattgcactgcaacattcccc---ccg +ggcggagcccctagcgcggatccgggggaggtagcagctttctgcagtgccctctataggtacaacaggttc +acccagcgccattcgcttacaggaggcttgtggttgcatcctgaagggttattgggcattttcccccccttt +tcccccgggcacctctgggagtccgctaaccctttttgtggggagggaactttgtacacccggacttggtca +acatctggtttttctagtgacttctcccccccggaggcggctgccgctgcgccggctgttgccac----ggg +gttgcccc---actctacaccccctgttagtgacat-----------------ctgggtgtt---------- +---------gccgccaccc----tctgaagagt--------------ctcaggctgatgcagcgtctgcccc +tcctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tccctaagcctgttcaacctcccggc +cctgccgggccaaag-------------------------------------gcccccgtgcgcaagccacc +aacaccgcc--------------------------------------acctccgcgcacccgccgcc----- +-------------------tcctctacacttatccggatggggctaaggtatatgcggggtcactgtttgag +tcagactgtgattggctggtcaatgcgtcgaatcccggccatcgtcctggaggtggcctttgccatgctttt +taccaacgctaccccgagtcct------tttacccaactgagttcattatgcgtgatgg---tcttgccgca +tacactttaactcctcggcccatcattcacgcagtggcccccgattatagagttgagcagaacccaaagagg +cttgaggcagcatatcgagagacctgctcccgccgtggtactgccgcttacccactcctcggctcaggcata +taccaagttcccgtcagtcttagctttgacgcctgggagcgtaaccaccgccccggagatgagctttatctg +actgacctcgctgctgcc-------------------------------------------------tggtt +cgaggccaacaagccagcaca--------------------------------------------------- +------------------------------------------accggccctcacaataactgaagatacggc +cc------------gtacagccaacctagcactagagatcg------------atgctgccacggaggttgg +ccgggcttgt---gccggttgtgcagttagtcctggaattgtgcactatcaatttactgccggggtccctgg 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+tatcgtcctattgggttgtatgccggcgtggtggtggcccccggcctcgggacgctacccgatgtagttcgc +tttgctggccggctgtctgagaagaactggggccctggaccggagcgggccgaacagctgcgccttgctgtt +tgtgactttcttcgagggttgacgaatgttgcgcaggtatgtgttgatgtcgtatcccgag-------ttta +cggagttagccctgggctggtacataaccttattggcatgctgcaaaccattgctgatggcaaggcccactt +tatagagactgttaaacctgtgcttgaccttactaattctattatacagcgggaagaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcctcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgtcgccgatgtcatttcgcaatccggggttggagctcgccctc +gacagccgccccg---------------cccccttgggtcctcctggcgtgaccagtccca----------- +------gcgcccctccgccgccccacgtcgtcgatctgcccca---------actggggctgcgccgctgac +tgctacatcacctgctcctgacacggcccccgtgcccgatgttgattcgcgtggcgccatattgcggcgcca +gtataatttatctacatccccacttacatcatctgttgcttcgggcactaatctggttctttatgctgcccc +gctaaatcccttgttacctcttcaggatggcaccaacactcatatcatggctactgaggcatctaactatgc +ccagtaccgggttgtccgagctacgatccgttacaggccgttggtgccgaatgctgtcggtggttatgcaat +ctccatctcattctggcctcagaccactaccacccctacgtctgttgacatgaattctattacctccactga +tgttaggatcctagttcagcccggtattgcctccgagttagttattcctagcgagcgccttcactaccgtaa +tcaaggttggcgctctgtggagacctcgggtgttgctgaggaggaggctacttctggtttggtgatgctctg +tatccatggctcccccgttaattcttataccaataccccctataccggggcgcttgggctccttgattttgc +tctagagcttgagtttaggaatctgacacccgggaacactaacacccgtgtttcccggtatacaagcactgc +ccgtcaccggctgcgccgcggtgccgatggtaccgctgagcttaccaccacagcggctacacgtttcatgaa +ggacctgcatttca---ccggtacgaat---ggggtcggtgaggtgggccgtggtattgctcttacactctt +taatcttgctgacacgcttctcggtggtctgccgacagaattaatttcgtcggctgggggacagttgttcta +ctcccgtcccgtcgtctcagccaatggcgagccggctgttaagttatacacatctgtagagaatgcgcagca +agataaagggattgctattccacatgacatagatttaggtgactctcgtgtggttattcaagattatgataa +tcagcatgagcaggatcggcccaccccttcgcctgccccatctcgccctttttcagttcttcgtgctaatga +tgttctatggctttc-----------------------------tcttaccgctgccgagtatgac------ +cagactacatatgggtcgtctaccaacccgatgtatgtctcagatactgtcacatttgt---caatgtggcc +acaggggcccaggctgtcgcccgctctctcgattggtctaaagttaccctggatggccgcccccttactacc +at-----tcagcagtactccaaaacattctatgttc-tcccgcttcgcgggaagctatccttttgggaggct +gggacaactaaa--gctggttatccttataactataacacgactgctagtgatcagattttaattgaaaatg +cagctggtcac------cgtgttgctat-ctctacttacaccaccagccttgg--------------cgctg +gtcctgtgtcagtttc-tgcagtcggtgtgttggccccacattcggcccttgcagttcttgaggatactatt +gact---------accctgctcgcg----cccatacttttgatgatttctgtccggagtgccgcgccc---t +tggtttgcaggggtgtgccttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattaa-tt----t--cctt---t------gt +gccc-cct--------tc-atag-tttct----gc-tt---t-----------------att-t-------c +ttttttct----gc----------------tgcccgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaa----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MG783571.1/17208/1-7208 |Hepeviridae isolate DLS1311685, complete genome +---------------------------------------------------------------------gc- +---catggaggcccatcagttcattaaggctcctggcattactactgcccttgag---caggctgctctggc +tgcggccaactctgcactggcgaatgctgttgtggttcggccgttcctatcccgtacccaaactgaggttct +gattaacttgatgcaaccacggcaactgattttccggcctgaggttttctggaaccatcccatccagcgtgt +gatacataatgagttggagcagta---ctgccgggcgc-gggccggccgctgccttgaggttggtgcccacc +caaggtccatcaatgacaacccgaatgttttacaccggtgttttttacggccggttggtcgggatgtccaac +gctggtactccgctccgacgcgcggcccggcggctaattgccgccgctcagcgttgcgtggcctcccaccct +ctgaccgtacctattgttttgacgggttctccggttgcactttcgctgcagagactggtctggcgctctatt +cactgcacgacttgtggcctgctgatgttgctgaagccatggcccgccacggcatggcgcgcctctatgtgg +ttcttcatctt-ccacctgaagtattattaccacccggcacctaccacacgacctcgtatctcctcattcat +gacggtaagcgtgccgttgtgacatacgagggtgacactagtgcaggttataaccatgatgtttcaacgctt +cgcgcgtggatccgtactaccaagatagtcggcgaacaccccctggttatagagcgcgttcgcgcgattggc +tgtcacttcgtactgcttttgaccgctgcccccgagccctcccctatgccttatgtcccatatcctcgctcc +actgaggtttatgtgcggtccatatttggccccggt---------ggctcgccctcactgtttccgtcagct +t----------gctgcacgaagtcta-cgttccatgcagttcctgttcatatctgggaccggctcatgctct +ttggcgctactctggatgaccaggcgttttgctgttcacggcttatgacctacctccgcgggattagttata +aggtcactgttggcgctcttgtcgccaacgagggttggaatgcctctgaggacgccctgactgctgtaatca +ccgcggcgtacctcaccatttgtcaccagcgttaccttcggactcaggctatatcccggggtatgcgacggt +tggaggtcgagcacgcccagaaatttattacgcggctctatagctggctctttgagaaatc---------tg +gccgtgactacatccccggccgtcagctccagttttatgcccagtgccggcgttggctttcagccggtttcc +atctagaccccagggtgcttgtctttgatgagtcggttccctgc---cgctgtcgggctttcttaggtag-- +----ggccgtaggtaggctgtgctgctttatgaaatggttagggcagga------gtgcacctgcttcctgg +----------------agccggccgagggcctcgtcggcgactgcggc--------catgacaatgaggcct +atgagggctccgaggtggacccggccgagcccgcccactctgatatttctggcacctatgctgtttatgggc +accagcttgaggccctgtacggggcacttaatataccgcgtgaaatcgcgactcgcgcatcccacctcgccg +cgacagttgaggtttctgccagtccgggtcgcctagactgccgtaccacgcttggtaacaagactttttcca +caacatttgtcgacggcgcccgcctagaggttaatggccc------------------------tgaccagt +atgttctctcctttgatgattctctacagtccatgggcgccggcccacacagcctcgcctatgagctcaccc +caggtggtctgcgggtccgagttacatcc-------aacggcttggactgcgaggtgacttttgcg---ccc +ggcgctgcaccgagcgctacacctggggaggtggcggccttctgcagtgctctctatcggtacaataggttc +acccagcggcactcgctagccggcgggctatggttacatcccgaggggttgctgggcatcttccctcctttc +tcccccggacatgtgtgggagtctgcaaaccccttctgcggcgagagcactctgtacactcgtacttggtcc +acttcaggtttttctagtgatttctcccctcctccggtggcagaggttgccct----------------ggt +cccaccagcagggcacaccccccttgcaggcgccac-----------------atcagaact---------- +---------accgccccct----cttgaggcgg--------------caccggctggtacaccactgtcccc +tcctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------taccgcggccagccgatttgcctg-- +-ctgccgcacagacc-------------------------------------ccagtcgcttgtgggtcacc +agcgccacc--------------------------------------gccgacccggacgcgtcgtt----- +-------------------tactctatgcctaccccgatgggtctagggtgtacgccgggtccctatttgag +tcggattgcgactggttggttaatgcatctaatcctggccatcgtcccggtggaggcctctgccatgctttc +taccaacgcttcccagaatcgt------tccgctcgacagagtttatcatgcgtgaagg---cctagcagcg +tatactttgacaccccgtccgattattcatgcagtagcaccagattataggttagaacataaccctaagagg +ttagaggcggcttaccgcgagacctgttcccgccgcggcaccgccgcatacccactccttggtgctggaatc +tatcaggtccccgtgagtctgagctttgatgcctgggaacgtaatcatcgtccgggcgacgagctctatctc +acagagcctgctattgct-------------------------------------------------tggtt +cgaggccaataagccgagtca--------------------------------------------------- +------------------------------------------gccggctctctcaataactgaagatgtcgc +tc------------gcacggctaacctggcgctagagatcg------------actctgccactgatgttgg +ccgtgcttgc---gccggtctcagcgttagtcctggggtcgtccattaccagttcactgctggggtcccggg +ttcaggaaagtctaggtctatacaacaaggtgaggttgatgtcgttgtggtccctacccgtgaacttcgtaa +cagctggcggcgccgtggttttgccgcatacacacctcacacggcggcgcgcgttactgggggccggcgtgt +cgtgattgacgaggcgccatcggtcccgccacacctgctgctattacacatgcagcgggcctcgtcggttca +cctgctcggcgacccgaaccaaatccctgctatcgactttgagcatgccggtttagtcccagcaattcgccc +tgagctggtccccaccagctggtggcatgtcacacaccgttgccctgctgatgtgtgcgagcttgttcgcgg +ggcgtaccctaagattcagactactagccgtgtgctccggtcgttgttctggaatgaa------cccgcctc +aggccagaagttggtcttcacgcaggcagccaaggctgccaaccctggtgcaattacggtgcatgaggccca +gggtgccaccttcaccgtgactaccattatagccacggccgatgccaggggccttatccaatcctctcgagc +acatgcaatagttgcactaacgcgccatactgagaagtgtgtgattttagatgcccccggcttgttgcgtga +ggttggtatatctgatataatggttaagaatttc------------------------------ttccttgc +tggcg--gggaagtgggccaccaccgcccctctgtgatcccccgcggcaaccctgaccagaacctcgacac- +-----attacaggcctttccgccttcctgccagatcagtgcttaccaccagttggctgaggagctgggtcac +cgcccggcccctgtcgccgccgtcctgcccccctgccccgaacttgagcagggcttgctatatatgccacag +gagcttacggtgtctgatagtgtgctggttttcgaactcacggacatagttcattgtcgtatggccgcccct +agtcaacggaaggccgtcctatcgacgctcgtgggcaggtacggccgccggacgaagttgtatgaggcagcc +cactctgacgtccgtgagtccctggcaaggttcatccctaccatcggacccgtccaggccaccacatgtgag +ctatatgaactggttgaggccatggtggagaagggtcaggatggttccgccgtacttgagcttgacctttgc +aaccgtgatgtatcgcgtattacattctttcagaaggattgtaataagtttacaactggggagaccattgct +catgggaaggtgggtcagggcatctcagcctggagtaaaactttctgcgccctgtttggcccgtggttccgc +gccattgaaaaggagatactggctcagctcccgcccaacgtcttctacggcgatgcatatgaggattcggtg +ttctcagctgctatcgccggggcgagttcttgtatg---gtctttgagaatgacttctccgagttcgacagc +acccagaataacttctccct------------------tgggcttgagtgcgccatcatggaggagtgcggc +atgccgcaatggcttattggactctaccatttagtacgatcggcctggattttgcaggccccgaaggagtct +ctgaagggcttttggaagaagctttctggtgaacccggcacccttttatggaatacagtttggaacatggcg +gtcatcgcgcattgttatgagttccgcgatctccgggttgctgcgtttaagggggatgactcagtcatcctc +tgctccgattaccgtcagagccgtcacgcggcagccttgatcgccggttgtgggttgaggttaaaagttgac +tatcgccctgtggggctgtatgctggtgtggttgtagcccccggtttgggggcgttgccggatgttgtccgt +tttgccggccggctgtccgagaaaaattggggccccggccccgaacgcgctgatcagctgcgcctggctgtc +tgcgacttccttcgaaggctgacgaatgttgctcaggtttgtgttgatgttgtctcgcgtg-------ctta +cggtgttagccccgggttggtgcataacctaattggtatgttgcaaaccattgcagatggtaaagcccactt +tactgagactatcaagcccgttttggaccttacaagctccattacacagagggttgaatgaataacatgtc- +t----------------tgtgcattgcccatggg------------atcgccatgcgccctcgggctctact +gctgctgctcctcgtgtttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggtagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgctgatgtcttaccacaacccggggctggagctcgccctc +gacagtcgccccgc------------ccccccctcggctcctcttggcgtgaccaatccca----------- +------gcgccccgccgctgccccccgtcgtcgatcagccaca---------gctggggctgcgccgctgac +tgctgtgtcccctgcgcctgatgctgtcccggtcccggacgttgattcccacggcgctatcttacgccgcca +gtataacctatctacctctccccttacttccactgtggcttctggtaccaacctcgtcctgtatgccgcccc +acttaatcctctgctgcctctccaggatggcactaacactcatattatggccactgaggcatccaattatgc +tcagtatcgggtcgtccgcgcgacgatccgctaccgcccgcttgtgcctaacgctgttggcggttacgcggt +ttccatttcgttttggccccagaccaccacaacccccacctctgttgatatgaattccatcacctcgaccga +tgtccggattctggttcaacctggtcttgcytcagaactkgtgatccccagcgagcgcctgcactatcgtaa +tcagggctggcgttctgttgaaacctcyggcgtggccgaggaagaggcgacttctggcctaattatgctgtg +cattcacggctcccctgtaaattcgtacacgaacaccccctataccggtgcattggggctgcttgattttgc +actagaacttgagtttagaaatctgacacctggraacactaatacccgtgtctcacggtacactagcacagc +tcgccatcgactgcgccgtggtgccgatgggaccgctgaaytracaaccactgctgctacccggtttatgaa +ggayttgcatttca---ccgggatgaat---ggggttggcgaggtcggtcgtggtattgccatgacactgtt +caatcttgctgatacgcttcttggcggcttgccgacagaattgatttcgtcggcagggggtcaagtatttta +ctcccgccctgtcgtctcggccaatggcgagccgactgttaagctttatacatctgttgagaacgcacagca +ggataagggcattgccatcccccacgacattgatctaggcgactctcgtgtagtgatccaggattatgacaa +ccaacatgagcaggatcggcctacgccgtcgccagccccatcccgcccctttttcgttctccgtgcgaatga +tgtcctttggctgtc-----------------------------cctcaccggtgctaactatgat------ +caaaccacccacgggtcgtccaccaaccctatgtatgtttctgacactgtaacatttgt---caatgtggct +actggcgcccaagccgttgcccgctccctcgattggtctaaagttactttggacggccgcccccttacgatt +at-----tgagcagaattctaagtcgtactatgtcc-tcccgctgcgtggcaagctctccttctgggaggct +ggtacaaccaag--gcaggttacccctataattataacaccactgctagcgatcaggtcctaatcgagaatg +catctggctac------cttgttgctat-ctccacttacactactaacctcgg--------------tgccg +gccctgtttctatttc-tgcggttggcgtcctcgccccacattcggctctcgccgttctttcggatactatt +gact---------accctgcccgtg----cccatacttttgatgacttttgcccggagtgccgtactc---t +gggcctgcaaggctgcgcctttcaatc--------tactgttgctgagttgcagcgcct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattaa-tt----tc-cttt----------gt +gccc-cct--------tc-atag-tttct----gc-tt--------------------tatt-t-------c +ttttttct----gc----------------tgcccgcgctccctt---------------------gaaaaa +aaaaaaa---------------aaaaa--------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MG197988.1/15115/1-5115 |Hepeviridae strain FRHuFulHEV3f nonstructural polyprotein gene, complete cds +------------------------------------------------------------------------ +----atggaggcccaccagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccctggcgaatgctgtggtggttcggccgttcttatcccgtgtccaaactgatattct +tattaacctaatgcaaccccggcagcttgtgttccgacctgaagtcctctggaaccatccgatccagcgagt +cattcataatgagctggagcaata---ctgccgagccc-gtgccggccgctgcctcgaggtgggcgcccatc +caagatccattaatgacaaccccaatgttctgcaccggtgctttcttcgcccagttgggagagatgtccagc +gctggtattcagcccctacccgtggtccagcggccaattgccgccgttctgcgctacgtggtttgccccctg +tcgatcgcacatactgcttcgatgggttctcccgttgcgcctttgccgctgagaccgggattgctttatact +cactgcatgacctttggccctcggacgttgcggaggctatggctcgccatgggatgacgcgcttgtatgccg +ccctccaccta-ccccctgaggtcctgttaccgcctggtacttaccacacaacctcctatcttctgattcac +gatggcaatcgcgccgtcgtgacttatgagggggatactagtgcaggctacaaccacgatgtatctatactt +cgtgcatggatccgcaccactaaaatagtcggtgatcacccattggtcatagagagggtccgcgccataggc +tgccattttgtcttgctcctcactgcagcccctgagccatccccaatgccttatgtcccgtaccctcgctca +acggaggtgtatgttagatccatatttggccctggt---------gggtcgccttctctcttcccgtcagct +t----------gttctaccaaatcta-cattccatgccgttccggttcatatttgggaccggctcatgcttt +ttggcgccaccttagatgatcaggccttctgctgctcgcggcttatgacctacctccgcgggattagctata +aagtgaccgttggcgcacttgtcgccaacgagggctggaacgcctcagaggatgcgctcactgctgtaatta +ccgcagcgtatctgactatctgccatcagcgctatctacgaacacaggccatctctaaaggcatgcgccggc +tagaggttgagcatgcccaaaagtttatcacaaggctatatagctggctgtttgaaaagtc---------ag +gccgtgactacatccccggccgccagctacagttttatgcacagtgccgccgctggctctcagctggtttcc +atctggaccccagagtccttgtttttgacgaggcagtcccctgc---cgctgccggagcttcttaaagaa-- +----ggttgccggaaaattttgttgctttatgaagtggttggggcagga------gtgcacctgcttcctgg +----------------agccagcggaaggcctggttggtgactgtggc--------cacgataacgaggctt +atgaagggtctgaggtggaccccgccgagcctgctcatcttgatgtttctggcacttatgcagttcatggcc +gtcagcttgaggccctatatagagcgcttaatattccagacgacattgcggcccgtgcgtcccgcctgacgg +ctactgtggaacttgccgccagtccaggccggcttgagtgccgtacggtgcttgggaataagacctttcgta +cctcaataaccgatggtgcccacctcgaggccaacggtcc------------------------cgaacagt +atgttttgacatttgatgattctcgccaggcaatgggggctgggcctcacagccttacgtacgaacttgttc +ctgccggtctgcaggttaaaatatcttct-------aatggcctggattgcaccgctatattcccc---ccc +ggcggggcgccaagcgccgcaccaggtgaagtagcggctttttgcagcgccctatacaggtacaacaggttc +acccagcgccattcgctgaccggcgggctgtggctgcaccctgaggggctccttggtctgttcccccctttc +tcccctgggcatctctgggagtctgcaaaccccttttgcggtgagagcacactttacacacggacttggtct +acatctggtttctctagcgacttctccccgcctgaggcggctcatgccgttccgatccctgatgt----agg +gctaccctcgggtgccccctcgtctgctagtgacgt-----------------ctgggtgct---------- +---------tccaccacct----tctgaggggt--------------cggcgatcgcatcgccgcccgatac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtaagccagccaacctgcctaga +cctaccacacctagg-------------------------------------ccccccgtccgtaagccgcc +tacgccacc--------------------------------------accagcccgcactcgccggc----- +-------------------tcctttatacatatcctgatggggccaaggtgtatgcaggttctctgtttgaa +tcagattgtgattggctggttaacgcatctaaccctggccaccgccctggtggtggtctctgccatgcattt +taccagcgtttcccggagtcgt------tccatccgactgacttcgtcatgcgtgatgg---tctcgccgca +tacactttgagcccgcgcccgattattcatgctgtggcccccgactacagggttgagcaaaaccccaagagg +ctagaggcggcgtatcgtgagacctgctcccgcctcggcacagctgcttacccgctactggggtcggggatt +taccaggtgcctgtaggattaagcttcgacgcctgggagcgtaaccaccgcccaggcgatgaactctacctc +actgagccagcagccgcc-------------------------------------------------tggtt +cgaggctaataagccagccca--------------------------------------------------- +------------------------------------------gccggccctaacaattactgaagataccgc +cc------------gcacagccaaccttgcacttgagattg------------actccgctactgaggtggg +tcgtgcttgc---gccggctgcaccgttaaccccggggtcgtccactaccagttcactgccggggtccctgg +ctccgggaagtctaggtccatacagcagggggatgttgatgttgtggttgttccaacccgtgagcttcgtaa +tagttggcggcgccgcggctttgctgcttttacaccccacacggcagctcgtgttactgccggccggcgcgt +ggtgatagatgaggcaccttcgcttccaccgcatttgttattgcttcacatgcagagagcctcatcggtcca +tcttcttggtgaccccaaccagatccctgctattgactttgagcatgccggtttggtcccagcgattcgccc +tgagcttgcccctactagctggtggcatgtcacccatcgttgccccgccgatgtgtgtgagctcatacgcgg +ggcttatccaaagattcagacgaccagccgtgtgttgcggtccttattttggaatgaa------cctgcggt +aggtcagaggctggttttcacgcaggcagccaaggcggccaaccctggtgcaattactgttcatgaagccca +gggtgccacgtttactgagactaccattatagccacggccgatgctcgaggtcttattcaatcttcccgtgc +acatgccatcgttgcacttactcgccatacagaaaaatgcgtcattctcgacgctcctggcctactgcgcga +ggtcggcatctctgatataattgttaataatttc------------------------------tttctggc +tggtg--gtgaggtgggccaccatcgcccttctattatacctcgcggtaacccagaccagaacctagacac- +-----cctacgagcattccctccgtcctgccaaattagtgcctaccatcagctggctgaggagctaggccac +cggccggctccagtagccgccgtcctgcccccctgcccagagctcgagcagggattactttacatgccgcag +gagctcacggtttccgatagcgtcctaatttttgaactcacggatatagtccactgccgtatggctgccccc +agtcaacgtaaggcggtcctttcgacgcttgtcggtaggtacggccgccgaacgaagctgtatgatgcggcc +cattctgatgttcgtgaatccttagggaggttcatcccaactatcggaccggtccaggctaccacgtgcgag +ctatatgagttggttgaggctatggtggagaagggccaagacggctccgccgtgctcgagcttgacctctgc +agccgtgatgtctcgcgtattacatttttccagaaggattgtaataaatttacaacaggtgagaccattgcc +catggcaaagtgggccagggcatttcggcctggagcaagaccttttgtgctttattcggcccgtggttccgt +gccattgagaaggagatcctggctctgctcccacccaacattttctatggtgatgcttatgaggagtcagtg +ttttctgcagccatttctggggctggctccagtatg---gttttcgagaatgatttttctgagtttgatagc +actcaaaacaatttttctct------------------tggccttgagtgcgttattatggaggagtgtggc +atgccccagtggcttatccgactgtaccatttagttaggtcagcctggaccctgcaggccccgaaagagtct +ctgaaaggtttttggaagaagcattctggcgagcctggtactctcctttggaacaccgtttggaacatggcg +atcatagcacactgctatgagttccgtgatttgagagtggcagcgtttaaaggggatgattcagtggttctt +tgcagtgattatcgccagagtcgcaatgcggccacccttatagccggttgtgggttgaaattaaaggttgat +tatcggcctatagggttgtatgccggtgttgtggtggctccgggccttggggcgcttcctgatgtcgtccgg +tttgccggtcgactatctgagaagaactggggcccgggccctgagcgcgccgaacagttgcgtctggcagtt +tgtgatttccttcgagggttaacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggtcagccccgggctggtgcataaccttattggcatgttacagactattgccgatggaaaggcccattt +tactgagactgtcaagcctgtactggatcttacaaattctatcatacagaggttggaatga----------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF959764.1/17206/1-7206 |Hepeviridae isolate WB/HEV/NA17ITA15, complete genome +------------------------------------------------------------------------ +----atggaggcccatcagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaactctgccttggcgaatgctgtggtggttcggccgttcctttcccgtgtgcagacagagattct +tattaatctgatgcaaccccggcagctggtgtttcgacctgaggtgctttggaaccaccctattcaacgggt +tattcacaatgaattagaacagta---ctgccgggccc-gggctggccgctgcttagaggttggggcccacc +caagatccattaatgacaaccccaatgttttacaccggtgtttcctgcgaccggttgggagggacgtccagc +gttggtactctgcccctacccgcggccctgcggctaattgccgccgctccgccctgcgcggcctccctcctg +ccgaccgcacctattgctttgacgggttttcccgctgtgctttcgctgcggagactggcatagccctttatt +ctttgcacgacctgtggccggccgatgttgcagaggccatggccagacatgggatgacacgcctgtacgccg +cattacacctc-ccccctgaggtgctcttaccacccggcacctaccacacaacttcatatcttttgatccat +gatggagatcgagccgtcgtgacctatgagggtgatactagtgcaggctataaccatgatgtctctatactt +cgtgcatggatccgcacaactaagatagttggtgaccatccattggtgatagagcgtgtacgggccattggt +tgtcattttgtgctgctgctcactgcagcccctgagccgtcaccgatgccttatgtcccatacccccggtcg +acagaggtgtacgttcgctctatatttggccccggc---------gggtctccgtctctgttcccgtcagct +t----------gctccacaaaatcta-cattccatgccgtcccggtccacatctgggatcggcttatgcttt +ttggcgccacccttgatgatcaggcattctgctgctcgcggcttatgacctacctccgcgggattagctaca +aggttactgttggcgcccttgtcgccaatgaggggtggaatgcctcagaagacgccctcacagctgttatta +ctgcggcgtatctgaccatctgccaccagcgttacctccgcacccaggccatatctaagggcatgcgccggc +tggaggttgagcatgctcaaaaattcattacgagactttacagctggttatttgagaagtc---------cg +gccgtgattatatccctggtcgccagctccagttctatgcacagtgccgccgctggttatcagcgggatttc +accttgatcctagggtgctcgtttttgatgagtcagtgccctgc---cgctgcaggacgtttcttaagaa-- +----agttgcaggaaaattttgctgttttatgaagtggctggggcagga------gtgcacttgcttcttgg +----------------agccggcagagggtctggtcggcgatcacggt--------catgataacgaggctt +acgaaggctctgaggtcgaccaggctgagcccgcacatcttgatatctctgggacttatgctgttcacggcc +gccagctcgaggccctgtatagggcacttaacatcccacatgacattgccgcccgggcgtcccgtttaactg +ccactgttgagctcgtggcaagcccggagcgcctagagtgccgcactgtgctcgggaacaaaaccttccgga +caacggtggttgacggcgctcatcttgaggcaaacggtcc------------------------tgagcagt +atgtcctttcgtttgacgcctcccgccagtcaatgggggccgggtcgcacaaccttacttacgagcttaccc +ccgccggtttgcaagttaagatttcatcc-------aacggcctggactgcactgcaacattccct---ccc +ggcggcgcccccagcgccgcaccaggggaggtggccgctttttgcagtgccctctacaggtacaacaggttc +actcagcgacattcgctgacgggtggattgtggctgcaccctgaggggctgctgggtatttttccccctttt +tcccctggacacctgtgggagtctgccaaccccttttgcggggaggggaccctgtatactcggacttggtct +acatctgggttttctagtrattttgcccccccggaggcggctgcccctgtgccggccgctactct----ggg +gtctcctc---gcccaacaccccccactagtggtat-----------------ttgggtgct---------- +---------gccgccgcct----tccgaggagt--------------tccaggctgatgcagcgcccgcccc +tgctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttcctgagcccgctcaaccacccagc +cctgccaaacctgag-------------------------------------gccccggcgcgtragccgcc +aacaccatt--------------------------------------gcctcaccgtactcgccgtc----- +-------------------tcctctatacttacccggacggtgctaaagtgtatgcagggtcactgtttgag +tcggattgtgattggctggttaatgcgtcaaatcctggccaccgacctgggggcggtctttgtcatgctttt +taccagcgttaccctgagtcgt------tccatccaactgagtttattatgcgcgacgg---cctcgccgcg +tatactttgacaccccgccctatcatccatgcagtggcccccgattatagggttgagcagaacccaaagagg +ctcgaggcagcgtaccgggagacctgctcccgycgcgggactgccgcttacccactcttgggctcaggtata +tacaaagtccctgtcagccttagttttgatgcctgggagcggaaccatcgccccggggacgagctctacctg +accgaccccgctgctgcc-------------------------------------------------tggtt +tgaagctaataagccggcaca--------------------------------------------------- +------------------------------------------gccggccctcacaataacagaggatacggc +cc------------gcacggctaacctagcattagagatcg------------atgcggccacagaggttgg +ccgtgcttgt---gcaggctgcatggttcgtcccggggtcgtgcattatcaattcactgctggggttccagg +ttcagggaaatcgaggtctatacagcagggggatgttgatgtggtggttgtccccacccgggagcttcgtaa +tagctggcgccgcaggggctttgcagcctttacacctcacacggcggctcgcgtcaccacgggccgccgcgt +tgtaattgacgaggccccgtctctccccccgcatttgctgctgctgcatatgcagcgggcttcgtcggttca +tcttcttggcgacccaaaccagattcctgccatagactttgagcatgccggcttggtccctgcaatacgccc +tgagctcgcacctaccagctggtggcatgtcacacaccgttgtcctgccgatgtgtgtgagcttattcgtgg +agcctatccgaaaatccagactactagtcgtgtgctgcgctccttattctggaacgag------cccgccat +tggtcagaagctagttttcacacaggccgctaaggctgccaaccctggtgcaattacagtccatgaggccca +gggcgctacctttacggagactacagttatagctacagctgatgctaggggcctcatccaatcttcccgggc +ccatgccatagttgcactcacccgccatacagagaagtgcgtcattctcgacgcccctggtctgctccgtga +agtcggcatatcggatattattgttaacaacttc------------------------------ttccttgc +tggcg--gagaggtgggccatcatcgcccttctgtgataccccgcggtagccccggycaaaaccttgagac- +-----attgcaagctttcccaccttcttgtcagattagtgcctaccatcagctagccgaggaactaggtcac +cgcccggcccccgttgctgccgtcctgcccccctgccctgagcttgagcagggcttgttgtatatgccgcag +gagctcacggtgtctgatagcgtgttggtattcgaactcacggatatagttcactgccgcatggctgctcct +agccagcggaaggccgtcttatctacgcttgtgggcaggtacggacgtaggacgaaattgtatgaagcggct +cattctgatgtccgtgagtccttagccaggtttatccccactattgggcctgtccaggccaccacatgtgaa +ttatatgagttggttgaggctatggtggagaagggccaggatggctctgcagtgctcgagcttgacctctgt +aatcgcgatgtatcgcgtattacattcttccaaaaagattgcaacaaattcaccaccggagagaccattgct +cacggcaaggtcggccagggtatctcggcatggagtaagaccttttgtgccctgttcggcccgtggttccgt +gctattgaaaaagaaatactgtccttgctcccgcctaacatcttttatggcgacgcatatgaggagtctgta +tttgctgccgctgtgtcaggagcggggtcatgtatg---gtgttcgagaacgatttctcagagtttgacagc +actcaaaataacttctccct------------------tggcctcgaatgtgtagttatggaggaatgtggc +atgccccagtggctaattcgattgtaccacctggttcggtcggcctggattctgcaggccccgaaggagtcc +cttaaaggattttggaagaagcattctggcgagcccggtaccctcctatggaacaccgtttggaatatggcg +atcatagcgcactgctatgagttccgtgattttagggttgctgcttttaaaggcgatgactcggtggtcctt +tgtagtgactaccgtcagagccgcaatgcggcagccctgattgcgggctgtgggctcaaattgaaggttgat +taccgtcctattgggttgtatgctggtgtggtggtggcccccggcttggggacactacctgatgtggtgcgc +tttgccggtcggctgtctgagaagaactggggccctgggccagaacgggccgagcagctgcgccttgcagtt +tgtgatttccttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtctcgtg-------ttta +tggagttagccctgggctggtacataaccttattggcatgttgcagaccattgctgatggtaaggcccattt +tacagagactgtgaaacctgtgcttgaccttacaaattccatcatacagcgggtagaatgaataacatgtt- +c----------------tgtgcatcgcccatggg------------atcaccatgcgccctagggctgtttt +gctgctgctcctcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gtcgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgccgatgttgtttcgcaatccggggctggagctcgccctc +gacaaccgccccg---------------ccccctcggctcctcttggcgcgaccagtccca----------- +------gcgcccctccgctgccccccgccgtcgatctacccca---------gctggggctgcgccgctgac +tgccgtatcgccggcccccgatacagcccctgtcccagatgttgactcgcgcggggctatcctgcgccggca +gtataatttatctacatctccgcttacatcatctgttgcttcgggcactaatttagttctttatgctgcccc +actaaatcctcttctgcctctccaggatggcactaacactcatattatggcaactgaggcatctaattatgc +tcagtaccgggtcgttcgggccacgatccgctaccggccgttggtgccaaatgctgtcggcggttatgcaat +ttctatctcattctggccccagactaccaccacccccacatctgtcgatatgaattccattacctccaccga +tgtcaggattctggttcaacctggcatcgcctccgaattagtcatccctagtgagcgtctccactatcgcaa +ccaaggttggcgctctgttgagacatcgggtgtggctgaagaggaggctacctccggtctggtgatgctttg +tattcatggctcccctgttaattcttatactaacaccccttatactggggcgcttgggctccttgatttcgc +attagagcttgagttcaggaatttgacaccagggaacaccaacacccgtgtgtctcggtacacaagcacagc +ccgccaccggctgcgtcgcggtgccgacggcactgccgagctcaccaccacagctgctacgcgctttatgaa +agacttgcacttca---ccggtacgaac---ggggtcggtgaagtgggccgtggtattgccctgacattgtt +taatcttgctgacacgcttctcggtggtctgccgacagaattaatttcgtcggctgggggacagttgtttta +ctcccgccctgtcgtctcagccaatggcgagccgactgttaaactatatacatctgtagagaacgcgcagca +ggataaggggatcgccattccacatgatatagacctgggtgactctcgtgtggtgatccaagactatgataa +ccagcatgagcaggaccggcccaccccttcacctgccccatcccgccctttctcagttcttcgtgctaatga +tgtactatggctttc-----------------------------ccttactgctgctgagtacgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctcggacactgttacatttgt---caatgtagct +acaggagcccaggctgttgcccgctcccttgattggtctaaggttactttggacggtcgccctcttaccacc +at-----tcagcagtattctaaaacattctatgtcc-tcccgctccgcgggaaattatccttttgggaggct +ggcacaactaag--gctggctatccttataactataataccactgctagtgatcagattttggttgagaatg +cagctggccat------cgtgttgctat-ctctacttacaccactagcctggg--------------cgccg +gccctgtgtcagtctc-tgcagtcggtgtactggccccgcattcggctcttgctgttcttgaggatactact +gatt---------acccggctcgcg----ctcatacttttgatgacttttgtccagagtgccgcgccc---t +tggtttgcaggggtgcgccttccagtc--------tactattgctgagcttcagcgcct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattaa-tt--------ctt--tt------gt +gccc-cct--------tc-atag-ctctc---tgc-tt---t-----------------att-t-------c +ttttttct----gc----------------tttccgcgctccctg---------------------gaaaaa +aaaa-------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF959765.1/17229/1-7229 |Hepeviridae isolate WB/HEV/NA21ITA15, complete genome +------------------------------agacca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccatcagtttatcaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaactctgccttggcgaatgctgtggtggttcggccgtttttatcccgcgtgcagaccgagattct +tatcaattttatgcaaccccggcagctggtctttcgccctgaggtactctggaaccaccccatccaacgagt +tatacataatgaattggaacagta---ttgccgggctc-gggccggtcgctgtcttgaggttggggcccacc +caagatctattaatgataacccaaatgttctgcatcggtgtttcttacgtccggtcgggagggacgtccagc +gttggtactctgcccccactcgcggccctgcggccaattgccgccgctccgccctgcgcggtctcccccccg +ctgaccgtacttactgttttgatgggttctcccgctgcgcttttgctgcagagactggtgtggctctttatt +ctttgcatgacctctggccggctgaggttgcggaggctatggccaggcacgggatgacgcgcctatatgccg +cactacatctc-cctcctgaggtattgctcccacctggtacctaccacacaacctcatatcttttgatccac +gacggtgaccgggctgttgtgacctatgagggtgacactagtgcaggttacaaccatgatgtctctatactc +cgtgcgtggatccgcacgacgaagatagttggtgaccatccgttggtgatagagcgtgtgcgggccattggc +tgtcactttgtgctgttgctcaccgcagcccccgagccatcacccatgccttatgtcccatacccccgatca +acagaggtgtacgtccgctctatatttggccccggt---------ggttccccgtccttgttcccgtcagct +t----------gttctacaaaatcta-cttttcatgctgtcccggtccatatctgggaccggctcatgctct +ttggcgccaccctggatgaccaggcgttctgttgctcacggcttatgacctatctccgtggaatcagctaca +aggttactgttggcgcccttgttgccaacgagggttggaacgcctcagaagatgctcttactgccgttatca +ccgcagcgtacttaaccatctgccatcagcgttaccttcgcacccaggcgatatccaagggcatgcgccggc +tggaagttgaacatgcacagaaatttatcacaaggctctacagctggctgtttgagaagtc---------tg +gccgtgattacatccccggccgccagctccagttttatgcacagtgtcgccgctggctgtcagcaggttttc +acctcgaccctagggtgctcgtctttgatgagtcagtgccctgc---cgttgcaggacgtttcttaagaa-- +----agctgccggcaaattttgctgcttcatgaagtggttggggcagga------gtgcacttgcttcctgg +----------------agccggccgagggtctggttggtgaccatggc--------catgacaatgaagcct +atgaagactctgaggttgaccaagctgagcccgcacatcttgacgtttcggggacttatgccgttcatgggc +gccagcttgaggccctgtatagggcacttaacatcccacatgacattgcagcccgagcgtcccgcctgactg +ccaccgtcgagcttgttgcaggtccggatcatttagagtgtcgcactgtgcttgggaacaagacattccgga +caacggtggttgacggcgctcagcttgaggcgaatggccc------------------------tgaacaat +atgtcctctcgtttgatgcctcccgtcagtctatgggggccgggccacacagtctcacctatgaacttaccc +ctgccggtctgcaggttaagatctcgtct-------aatggcctagattgtactgcaacatttcct---ccc +ggtggcgctcctagcgccgcaccgggggaggtggctgccttctgcagcgccctttacaggtacaataggttc +acccagcggcactcgttgattggtggtctctggctgcaccctgaggggctattaggcatcttcccccctttc +tcccctgggcacctttgggagtccgctaaccctttttgtggggaagggactttgtacacccgcacatggtcc +acatctggtttttctagcgatttctccccccctgaggcggctgcacttgcaccagccgcccctct----ggg +gccacccc---attctacaccccctgttagtgacat-----------------ctgggtgtt---------- +---------accgccgcct----tctgaggagc--------------tccaggttgacgcggcgcctacccc +tcctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctcttaagcctgttcaagtgcctgtc +tctgctcagcctaaa-------------------------------------gatcccgtgcgtaagctgtc +gacacctcc--------------------------------------accttcccgtactcggcgcc----- +-------------------tactttacacctatccggacggcgccaaggtgtacgcggggtcattgtttgag +tcggactgtgactggttggttaatgcgtcgaaccctggtcatcggcccgggggtggtctctgccacgctttt +taccagcgctaccccgagtcgt------tttacccgaccgagtttattatgcgcgacgg---tctcgccgca +tataccttgactcctcgtcctatcatccatgcagtggcccctgactatagggttgagcagaatccgaagagg +ctcgaggcggcgtaccgagagacctgttcccgccgaggcaccgccgcttatccacttttaggctcgggcata +tatcaagtccctgttggcctcagcttcgacgcttgggaacgtaaccaccgccccggcgatgaactttatttg +actgatcctgctgctgcc-------------------------------------------------tggtt +tgaggccaacaagccgacaca--------------------------------------------------- +------------------------------------------gccggctcttacgataactgaggatatagc +cc------------gcacggccaatttagcattagagatcg------------atgctgccacagaggtcgg +ccgtgcctgt---actggctgcacagttagccccggggttgtacactaccaattcactgcaggggtcccagg +ctcggggaagtcgaggtctatacagcagggggaagtcgatgtagtggttgtccccacccgagagctccgtaa +tagctggcgtcgccggggttttgcagcttttacacctcacacggcggcccgcgttactgtgggtcgccgtgt +tgtgattgatgaggccccgtctcttccaccacacctgttgctactgcacatgcagcgggcctcgtcggtcca +tcttcttggcgatccaaatcagatccccgccatagattttgagcatgcaggcctggttcccgcgatacgccc +ggagcttgcgcctaccagttggtggcatgttacacatcgctgccctgctgatgtttgtgagcttatacgcgg +cgcttaccctaagatccagaccacgagccgtgtattgcggtctctgttttggaatgag------cctgccat +cggtcagaaattagtctttacgcaggccgccaaggccgccaaccctggtgcgatcacagtacatgaggccca +gggtgccacctttacagagaccacgatcatagctacggctgatgctaggggccttattcaatcttcccgcgc +tcatgctatagtcgcactcacccgccacacagagaagtgcgtcatattggatgcccccggtctgctgcgtga +agttggcatatcagacataatagtcaataatttc------------------------------tttcttgc +tggtg--gggaggttggccaccatcgtccctctgtgatacctcgtggtagccctggccagaaccttgagac- +-----gctgcgggccttcccgccttcctgtcagattagtgcttatcatcagttagctgaggagctgggccat +cgtccggcccctgtagctgctgtcctgcccccttgccctgagcttgagcagggtttattatacatgccgcag +gaacttacggtgtctgacagcgtcctggtttttgaactcacggacatagttcactgccgtatggctgcccct +agccaacggaaggctgtcctgtcaacgcttgtggggagatatggtcgcaggacgaagttatatgaggcggcg +cattccgatgtccgtgagtccttagctaggtttatccctaccattgggcccgtccaggccaccacatgtgaa +ctatacgagctggttgaggctatggtggagaagggccaggacggctccgctgtattggagctcgacctttgc +aaccgtgatgtgtcgcgcatcacatttttccaaaaagattgtaataaatttaccaccggtgaaactattgcc +catggtaaggttggtcagggcatttccgcctggagcaagaccttttgtgctttatttggcccttggttccgt +gccattgaaaaggaaattttggctctgctcccgcctaacatcttttatggcgatgcttatgaggagtctgta +tttgctgctgctgtatccggggcggggtcgtgtatg---gtgttcgagaatgacttttcggagtttgacagt +actcagaataatttctccct------------------cggccttgagtgtgtagttatggaggaatgtggc +atgccccagtggctcatccggctctaccatttggttcggtcagcctggattttgcaggcaccgaaggagtcc +cttaaaggcttctggaagaagcattctggtgagcccggcacccttctttggaacacagtttggaacatggcg +atcatagcgcattgctatgagtttcgtgattttagggttgccgcttttaagggtgatgactcggtggtcctt +tgcactgattaccgtcagagccgcaacgcggcggccttgattgcaggttgcggactcaagttgaaggttgac +taccgccctatcgggctgtatgccggtgtggtggtagcccctggtttagggacattacctgatgtggttcgt +ttcgctggccggctgtcagaaaagaactggggccccggccccgagcgcgctgagcagctgcgccttgcagtt +tgtgatttcctacgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgcg-------ttta +cggggttagtcccgggctggtgcataaccttataggcatgctgcaaactatcgccgatggcaaggcccactt +tacggagactgtcaaacccgtgcttgaccttacaaattctatcatacaacgggtagaatgaataacatgtc- +t----------------tttgcatcgcccatggg------------atcaacatgcgccctagggctgttct +gttgttgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcg------------gccgtcgacgggg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtttcgcaacccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggttccgcttggcgcgatcagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctacccca---------gctggggctgcgccgctaac +tgccatatcaccagcccccgacacggctcctgtgcctgatgtcgattcgcgcggtgccatactgcgacgaca +gtataacctatctacgtcccctcttacgtcatctgttgcctctggcaccaatttagttctttatgctgcccc +gctgaatcctcttctaccccttcaggatggcaccaacactcatatcatggccactgaggcgtctaattatgc +tcagtatcgggtagttcgagctactatccgctaccgcccattggtgccgaatgctgtcggtggctacgctat +ttctatatccttctggccccagactactactacccctacatctgtagacatgaactctatcacctccactga +cgttaggatcctggttcaaccaggcattgcttctgaattggttattcctagtgagcgcctccattaccgtaa +tcagggttggcgctctgttgaaacatcgggtgttgcagaagaggaggccacttctggtctggtaatgctttg +cattcatggctcccctgtcaattcctatactaataccccctacactggtgcacttggacttcttgattttgc +tttggagctcgagttcaggaacttgacgcccgggaacactaatacccgtgtgtctcggtacacaagtacggc +ccgccaccggctgcgccgcggtgccgatggcactgccgagcttaccaccacagcagccacacgttttatgaa +ggacttgcatttta---ctggcacaaac---ggggttggtgaggtgggccgtggcattgccctaacactgtt +caacattgctgacacgcttctcggtggtttgccgacagaattaatttcgtcggccgggggtcagttgtttta +ctcccgtcctgttgtctcagccaatggcgagccaactgttaaactgtatacatctgttgagaatgcacagca +ggacaagggtattgctattccacacgatatagatctgggcgattctcgtgtggtcattcaggattatgacaa +ccaacatgagcaggatcgacctaccccttcgcctgccccgtctcgccctttttcggtccttcgtgctaatga +tgttttatggctctc-----------------------------acttacagccgccgagtacgat------ +cagaccacgtatgggtcgtccaccaacccgatgtatgtctcagatgccgttacacttgt---taatgtagct +acaggggcccaggcagtcgctcgttccctcgattggtctaaggtcactctggacggtcgtccccttaccacc +at-----ccagcagtactctaaaacattttatgtgc-tcccgctccgcgggaagctatccttttgggaagct +ggcacaacaaag--gctggctacccctacaattataacacaactgctagtgaccaaattcttattgaaaatg +cggctggtcac------cgcgttgctat-ttccacttacactactagcttggg--------------tgctg +gccctgtgtcagtttc-tgcagttggtgtgttagctccacactcggctcttgctgctcttgaagatactgtt +gact---------acccggcccgtg----cccatacttttgatgacttctgcccggaatgccgcgccc---t +tggtttgcaggggtgtgctttccagtc--------tactattgcagagcttcagcgcct------------- +--------taaaatgaaggtaggcaaaacccgggagttttaattaa-tt----c--tctt---t------gt +gccc-cct--------tc-atgg-ctttt---ttc-cc---t----------------tatt-t-------c +tttcttct----gc----------------tttccgcgctccctg---------------------gaaaaa +aa---------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MG737712.1/16788/1-6788 |Hepeviridae strain 201773347, complete genome +---------------------------gttgcaccg-ggtgtgac-----------c-----agttgccgg- +--ggatggacgtctcgcagtttgcagactccaagggggtgaagacagcgctagaa---gcggccgctctagc +agctgccaatacggccctgcgaaatgcgcgggtcattaccccctacctaaccccccagcagacaaagaatct +gcaggagttatttgggggctcgcagttacgtttcgagcccaaggacaactggtcacacccggtgcaacgggt +ggtgcatgatgcgctggaggcgtacgtccgccgtgccg-ctggcagtgactgccttgaggttggcgcgcacc +cccgctcgatcaacaagtacc---gggtttctcatcgctgctttctgcccccggttgggcgcgatgagcagc +gttggcaggttgcacctcgtcggggtctt---tgcaacataatccggaaggcgttgcgcaatggtgtgcgaa +ccgccaaggaattctgccagcttggtttccaggtgtgtagtgtgaaggccgaggttggtgtggcgctgtaca +gcctgcatgacatgcgacctgctgatgtggcgtgtgcgatggctaggcacggcatgcgtaccctgtatgttg +tgctacacctg-ccggaggaggcgctactcccacccggggtgtacaccaataagttctatggggttgtcaac +accaaggaccgcacgatcgtcacatatgctgacgacacatgtgctgggtacattcacaagactgccgtcctg +cgagagtgggtacgagcgaccggtgtggcggggcggcacccgatgctggtggaacgagtgaaatctattggc +tgccactttgtgttgctgtgcacggctacg---gaccccatgccgatgccgtacacaccttatccacgcact +gagagcgtctatgttcggaatgtgtatgggcctgca---------cttgcggcgggcctgttcacaccccgg +t----------gctgtgtagacgcca-tgttttatgcggttccgcggagggtgtggcagaggctaatgatgt +ttgggaccaccttggatgatgatgctttttgctgctcacggttgcttacatatctccgtggcatatccacaa +aggtgaccgtcggcaatgttgtcgcgaatgagggttggcaaccagaggagcagcagctgacggcagtggcta +ttgctgcatacctaactgtctgccatcaacgttgggtgcgcacgcaaggaatatcacgtggcgtccgccggc +tgcaggctgaacatgcacagtcgttt---------------------tggttcaaggtgtg----ggaaatg +tttacgaacacaggcacggtacctggctacagt-----------------------------gcgggcttct +accggcagctagctacctggatcagtgccggactcgtgattgac---cacgaacgcaaggtgtttgatgc-- +-ccgggctaagtgtgggtgttgctgtgcttgcggcaagcccgggcagcgggaaccgtgcacctgcctggaag +----------------atatacccgagggc---------gggcatggcat------tgtgaaggtgaagcac +tggccggtcc--------gcccggctggcgcatctaacgt--------------------cagtcggtggaa +gacggttcgggtccgtgctgatagcgtccaggact-----------------tgattcagccgggcgggtgg +gcatttgtgcccacgctacgagagttggctgctaggg----------------------------------- +----------cgctgacattcccccccaggcccccgcccgggacgctgctgtgccgcactaacccacgagga +atgcacgtgccgttggaacctagtgccccgccgctgccgtcgcccaccccggccctgccccga--------c +ccacagggccggtggtggagactgacgct---------------ggatccatgtgcagcatgccgc---cct +tggaggac-----------------------------------gaggagcctgccatagccacagtagcg-- +-------------------gtggcagaccgtggtgagaccctggg--------------------------- +------------------------------------tgcggccgcagagcaggttgcgcccggac------- +------------------------------------------------------------------------ +-------------------------------ggcgt----------------------------ggg----- +-----------------------tatgaggaac--------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-------------------tgctgcatgtcacaccggctggtgcgatggttgttgtgggcaatatactggac +gccaccacaacctggcgagtcaacccggcgaatgcgtcgcacagcccaggtggtgggctgtgcggtatgttc +caccgtaggtggccgcatttgtggccggtttctggtgccgtggtggatgcgcctagcgg---gcctgttata +ttccaggatggaccaccggcaacgatccacgccccgggccctgattaccggcaaggcccccaacctgaagcc +ctgcgtgcagtctaccgagtagtacatcaggcgactggcaccgtggcctgcccactgatatctgctggcatc +tatcgggcccccatagaggagtcgtacagagcttgggaggcgagcgcccgcagcggcgatctgctgtatgtg +caacgatcattggtcaccacactgagggaactg----------------------------------tgttt +aggggccaa--------------------------------------------------------------- +------------------------------------------acctgtgggtaggctcgttgtggacaaagg +ga------ttgcggacatggtgaactatgggttgcaaactg------------aacctgc-accgtacgggg +acattgtcgcagggttggcggtcgagccgtatgagaagacctacacta-----tgattgctggagtgccagg +tagcggtaaatcga---ctggggtgaatgccaagggtgcggtcgtggtggcgcctacaaaacagcttgcccg +cgactggatgcgccgtggcgccaccgcattaacgcctcatattgcggcggctgccggacccactggtcgtgt +gatagttgatgaggccttcgccatccccccacacttgcttgcggctgcagtgcgtaacgccgaaacgctgtt +gttgctaggtgaccccaagcagataccggcattggattttgatgaccgcaagttatgtgcagcaatagatct +gcggctgcaacccacggtgtggaggaacgtaacccaccgctgcccgtgggacgtctgtaagttcctgcaagc +tgattaccccggcatgaccaccacgagtcgagtgatccggtctgtggtgttcaccggt------gagcaaat +cgggcagaagattgtgttcacacaaatcgcaaagcagtgcaacccagggtccatcacagtgcatgaggcaca +aggcagcacctacagccaagtgactgttatagccaccctagacgcccgcggcctgattgctagttctagggc +acatgcgattgttgcgctgacgcggcatactgatcgttgctctgttattgaccgtgcgggcatgcttgcaga +aattggtgtcaccgacgctatgtttaataatattgagttgcaactagtaacaccagaggcatcggtcccggc +tggggttgtgaggatggcc-----------------------------------gatgaggttgtgaatgg- +-----tgaactagggctgccgccggcacctacggatgtggcgtcagccctgaccgctgaggccatagggcat +gagccactggatgtcgcggcggtcaacccaccggggccagcactggaacaggggttgctgtacatgccagag +aggttggatgggaaggatgaggttgtcaagttgatgctgtccgacacggtgcattgtaggctctccgcccca +acgagcaggcttgcggttatcaacacactggtagggaggtatggtcgggccacaaaaat---cacggatgcc +ccagttgagctcatggacaccgtagaagggttctggcgtggcattgcaccgctacagccgaccaccatcgag +tacggggagatgtgccgggccctgcttgacaaaggccaagatggtagcttgatagttgctctggatttgtgt +gataaagagtgtagccggataacgtttttccaaaaggactgcgccaagtttaccctggaggaggttgtccag +catggcaaagtgggacaaggtatctccgcgtggcccaaaaccctgtgcgccttgtttggcccgtggttccgt +gcgattgaaaaacagctggtgtccaacctgccgcccggttatttttatggtgacctgtacaccgagtccgac +ctacaccgtgctgtgctctgcgcatctgcggaccagagtgtgttcgagaatgatttctctgaatttgactcc +acccaaaataatgtgtcact------------------cgggttggaatgtgacatcatggcgcgatttggc +atgccgagttggatgatccagctgtaccatctggtccgctcctactggatccttgtcgcaccgaaggaggcg +ctgcgtgggtgctggaaaaagcactcaggggaaccaggaacactgctgtggaacacggtctggaatatgact +gtgttgcaccacgtgtatgaatttgacaaccccacggtgttgtgttttaaaggtgatgacagtgttgttgtg +tgtgatggagtgactagccgccccactggcgcccagttagtggccgattgtggcttgaagatgaaggataag +atcggacccgtgggggttttttcgaacttgcttgtgttccccggggccggtgttgtgaaggatgtgttgcgg +cagtgggggcggttgacagaaaagaactggggacccggctctgatcgtatggcggatctggagcaagcttgt +cgtgattttgtgagcggtgtgttg-gtggagggcaaagaggccctgacagtgcagttggtggcgagctacta +tggggttgagacgggtctgattgaagtggtgttcggtgccctcaaggcgtgtgcagagggtcgggaggacct +catgaccgttcgactaccggtactaaaccttgctaa-----------ggaggactgaacaaataacacacat +tttgcagaatg------ccagctgaactcacgggttgcgaccgttgccgatcaggtgcccactgccaggctt +gtcattgttgctgggggcggtgcctggtctgctctggt----ggtggccattgtggtggctgcttctgctgc +cctccga-----ccgggtcgtgtgttgggtctggttgagctgcggcgttgtatgtgcttgttctgtcggtat +tggtgctgtacatcgaagggaacaggatgtcggtgcgcggattgttgc---tcctgcttgctatgtgt---- +------------tgcggagtgtctcgtgcctcccagacaggaagaaacggtagagggagg-----------c +gcccgccaccccgtga------------caaccgtacagccgtgtggtcta--------------------c +aaacacacgccccgaaggaacc------------------------------gtcggcccctccccacttac +cgacgttgtcacctcagcaggtactcgcacggtaccagatgtagaccaggcgggagcagtgcttgaacggca +atacaatctggtgactagcccgctgagcctgaccaccccaggaacgactaatgccctgctttacgctgcccc +ggtgtctccgctcatgccgctacaagatggcaccacggccaccatcatgtctaccgaggcgtgcaactatgc +tcagtaccgggtgcaaggcctcaccgtgcgctggcggccggttgtgccaaacgctgtgggcggcttctcgat +cagcctcgcgtactggccccagacgacgtcaacaccaactagcgtcgacatgaattccataatgtcgactga +tgtgagagtggtgctgcaaccaggtgttgcagggttgttaaccatcccacatgagcggctggcatataagaa +caacggttggcggtcagtggaaactgtgtctgtgccccaggaagacgctacctctggcctgctcatggtgac +agtgcacgggacgccgtacaacagctacaccaacactgtgtacaccggcccccttggcatgttggatcttgc +cctccgtttgcagctacgcaacttatcgcccggcaacactaactcgcgcattacgcgcgtgaaagtgactgc +agggcataagatcaagtccagcccgggcggtgcgacca---ttgtgaccgcagctgctacacggttcatgtg +cgacttacgctggg-gtctgggcgtggct--gaggatgggcagactggccatggcattctcggtgtgttatt +caacattgccgattccgtccttgggggcttgccgtcaactttactgcgggcggccagtgggcagtatatgta +tggaaagcccgttggcaatgccaacggcgagcctgaggtcaagttgtacgcgtcagttgaggatgcggtcaa +tgataaaccaataatggtgccacatgatgttgacttgggtgagagttcggtggtgtgtcaggattatgggaa +ccagcatgtcgatgaccgtcctagcccggcacctgcaccgaagcgcccgctcggcacactgcggtctggtga +tgtgttgcgtattacggggcctatgcaatacatcaccaatcatgagctgctgccccagagtgtggcgaa--- +tgggtactttgcgg--------------------------ccggcgcgatgatgactgtgcataacctgatg +acgggtgtcagggctgcagccaacacagtcgactggacccgagccaccattgatggcgtccagatcaaggtt +gtaggcgccggcagtggcagcaaccaatttgcggccatgccagcctttggcaagccagccgtgtgggg---- +----ccatcaaggcgccgggtatttctatcagtataacaatacacaccaggagtgggtctattttatgaaga +acggtgg----------cgcgatagtgtggtatgcctacactaacatgttgggcaacaatgcagacatatca +atcctgtttgaggtccgcccaatcaacatggaggattcaccttggctgttggcaccgcactctggcgatgac +aactgcgc-cacctgcttgcccatgggccttcgcacctgttgtaaggttccaccagagcagcgtccac---- +-------------------------------------------cggaagttcagcggct------------- +gttttc--taagctgggcatcaattag--cctggatttctcacttg----------cctttaatcaggcgat +gcga---------------ttaatttatt----gtgtt-aatttat-------atggttatt------gaat +tatttacca---------------------attaccc----------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MH074880.1/17208/1-7208 |Hepeviridae strain Kol16, complete genome +----------------------------gcagacca-catatg-------------t-----ggtcgatgc- +---catggaggcccatcagtttatcaaggctcctggcatcactactgctattgag---caggctgctctagc +agcggccaactctgccttggcgaatgctgtggtagttaggccttttctctctcaccagcagattgagatcct +cattaacctaatgcaacctcgccagcttgtcttccgccccgaggttttctggaatcaccccatccagcgtgt +catccataatgagttggagctcta---ctgccgcgccc-gctccggccgctgccttgaaattggcgcccacc +cccgctcaataaatgataatcctaatgtggtccaccgctgcttcctccgccctgttgggcgtgatgttcagc +gctggtatactgcacccactcgcgggccggctgctaattgccggcgttccgcgctgcgcgggctccctgctg +ccgaccgcacctattgcttcgacgggttttctggctgtaactttcccgccgagacgggcatagccctctatt +ccctccacgatatgtcaccgtctgacgtcgccgaggccatgtctcgccacggtatgacgcggctttatgccg +ccctccatctt-ccgcccgaggtcttgctgccccctggcacataccgcaccgcatcgtatttgctgattcat +gacggcaggcgcgttgtggtgacgtatgagggtgataccagtgctggctacaaccacgatgtctccaacctg +cgctcctggattagaaccaccaaggtcactggagatcacccccttgttatcgagcgggtcagggccataggc +tgccactttgttctcttgcttacggcggccccggggccatcacctatgccttatgtcccttacccccggtct +accgaagtctatgtccgatcgatttttggcccgggt---------ggtactccttccttgttcccaacctca +t----------gctcgactaagtcta-ccttccacgccgtccctacccatatttgggaccgtcttatgttgt +tcggggccaccctggacgaccaagccttttgctgctcccgtttaatgacctatcttcgcggcattagctaca +aggttactgtgggtacccttgtggctaacgaaggctggaacgcctctgaggacgccctcacagctgtcatca +ccgccgcctaccttaccatctgccaccagcggtacctccgcacccaggctatatctaaagggatgcgtcgcc +tggaacgggagcatgcccagaagtttataacacgtctctatagctggctctttgagaagtc---------cg +gccgtgattacatccccggccgtcagttggagttttacgcccagtgtaggcgctggctttcggccggcttcc +atcttgacccacgggtgctggtttttgacgagtcggccccctgc---cattgcaggaccgcgatccgtaa-- +----ggctctctcaaagttctgctgctttatgaagtggcttagtcagga------gtgtacttgtttccttc +----------------agcctgcagaaggcgtcgttggcgaccagggc--------cacgataatgaggcct +atgaggggtccgatgttgaccccgctgagtccgccattagtggtatatctgggtcctatgtcgtccttggca +cagccctccaacctctttaccaggccctcgatctccccactgagattgtggctcgtgcgggtcggctgaccg +ccacagtaaaggtctcccagaccgatgggcggatcgattgtgagacccttcttggtaacaaaaccttccgca +cgtcattcgttgacggggcggtcttagagaccaatggccc------------------------ggagcgcc +acaatctttcttttgatgtcagtcagagcactatggctgctggccctttcagtctcacctatgccgccactg +cagctgggctggaggtgcgttatgttgct-------gccgggcttgatcaccgggcggtttttgcc---ccc +ggagtttcaccccggtcagcccctggcgaggtcaccgccttttgctccgccctatacaggttcaaccgtgag +gcccagcgccattcgctgaccggtaatctatggtttcatcctgaggggctccttggcctcttcgccccattt +tcacccgggcatgtctgggagtcggctaatccattctgtggcgagagcacactatatactcgcacttggtcg +gaggttgacgccgtctctagtccggcccggcctgatttaggttttatgtctgagccttctatacctagtagg +gccgccac----------------------------acctat-----------ccccgcggc---------- +---------cctcctacct----ccctctgcac--------------cggacccatccccccctccctctgc +cccgg------------------------------------------------------------------- +-------------------------------------------------------------cgc-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ccgatgagccggct------tctggc +actaccgc-----------------cgg------------------------ggcctcggccataacccacc +aga----------------------------------------------cggcccggcaccgccgcc----- +-------------------tgctctttacctacccggatggctctaaggtatttgccggctcgctgttcgag +tcgacatgtacgtggcttgtcaacgcgtctaatgttgaccaccgtcctggcggcgggctttgccatgcattt +tatcaaaggtaccccgcctcct------ttgatgccgcctcttttgtgatgcgcgacgg---cgcggccgcg +tacacattaacccctcggccaataattcatgctgtcgcccctgattataggttggaacataacccaaagagg +cttgaggctgcctatcgggagacttgctcccgcctcggcaccgctgcatacccgctcctcgggaccggcata +taccaggtgccgatcggccccagttttgacgcctgggagcggaatcaccgccccggggatgagttgtacctc +cctgagcttgctgccaga-------------------------------------------------tggtt +tgaggccaatcggccgacccg--------------------------------------------------- +------------------------------------------cccaactctcactataaccgaggatgttgc +ac------------ggacagcgaatctggccattgagctgg------------actcagccacagatgtcgg +ccgggcctgt---gccggctgccgggtcacccccggcgttgttcagtaccagtttactgctggtgtgcctgg +atccggcaagtcccgctctattactcaagccgatgtggcaattgtcgtggtcccgacgcgcgagttgcgcaa +tgcctggcgccgccgcggcttcgctgcattcactccgcacacagccgctagagtcacccaggggcgccgggt +tgtcattgatgaggctccgtcactccctcctcacctgctgctgctccacatgcagcgggccgccaccgtcca +tctccttggcgacccgaaccagatcccagccatcgactttgagcacgctgggcttgttcccgccatcaggcc +cgacttagcccctacctcatggtggcatgtcacccatcgctgccctgcggatgtatgtgagctgatccgtgg +tgcataccccatgatccagaccactagccgggtcttccgttcgctattctggggcgag------cctgccat +tgggcagaaactagtgttcacccaggcggctaaggccgccaaccccggctcagtgacagtccacgaggcaca +gggcgctacctatacggagaccaccattattgccaccgcagacgcccgaggccttattcagtcgtctcgggc +tcatgccatcgtcgccctgacgcgccacactgagaagtgcgtcatcattgacgcaccgggcctgcttcgcga +ggtgggcatctccgatgcaatcgtcaataacttt------------------------------ttcctcgc +cggtg--gcgagattggtcatcagcgcccatctgttattccccgtggcaatcctgatgccaatgttgacac- +-----cctggctgcctttccgccgtcttgccagattagtgcctttcatcagctggctgaggagcttggccac +agacctgcccctgttgcagctgttttaccaccctgccctgagcttgaacagggcctcctctacctgccccag +gaactcaccgcctgtgatagcgttgtaacatttgaattaacagatattgtgcactgccgcatggccgccccg +agccagcgcaaggctgtgctgtccacactcgtgggccgctacggccgccgcacaaagctttacaatgcctcc +cactctgatgttcgcgactctctcgcccgttttatccccgccattggccccgtacaggttacaacttgtgaa +ttgtacgagctagttgaggccatggtcgagaagggccaggatggctccgccgtccttgagctcgacctttgc +aaccgtgacgtgtccaggatcacctccttccagaaagactgtaacaagtttaccacgggcgagaccattgcc +catggtaaggtgggccagggcatttcggcctggagcaagaccttttgcgccctctttggcccttggttccgt +gctattgagaaggctattctggccctgctccctcagggtgtgttttatggtgatgcctatgatgacaccgtc +ttctcggcggctgtggctgcagcgaaggcatccatg---gtgtttgagaatgacttctctgagtttgactcc +acccagaataatttctctct------------------aggcctagagtgtgctattatggaggagtgcggg +atgccgcagtggctcatccgtttgtatcaccttataaggtctgcgtggatcctgcaggccccgaaggagtct +ctgcgagggttttggaagaaacactccggtgagcccggcactcttctatggaatactgtctggaatatggcc +gttattacccactgctatgacttccgcgatttgcaggtggctgccttcaaaggtgatgattcgatagtgctt +tgcagcgagtaccgtcagagcccgggggctgctgtcctgatcgccggctgtggcttaaagttggaggtagac +tttcgcccgattggtttgtatgcaggtgttgtggtggcccctggccttggcgcgcttcctgatgttgtgcgc +ttcgccggccggcttaccgagaagaattggggccctggccctgagcgggcggagcagctctgcctcgctgtg +agtgattttctccgcaagcttacgaatgtagcacagatgtgtgtggatgttgtctctcgtg-------ttta +tggggtttcccctgggctcgttcataacctgattggcatgctacaggctgttgctgatggcaaggcccattt +cactgagtcagtaaaaccagtgctcgacctgacaaattcaatcctgtgtcgggtggaatgaataacatgtc- +t----------------tttgctgcgcccatgggt---------tcgcgaccatgcgccctcggcctatttt +gctgctgttcctcatgtttctgcctatgctgcccgcgc---------------------------------- +-caccgc------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggttc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----caatcccctatattcat---- +--------------ccaaccaaccccttcgcccccgatgtcaccgctgcggccggggctggacctcgtgttc +gccaacccgcccg---------------accactcgactccgcttggcgtgaccaggccca----------- +------gcgccccgccgctgcctcacgtcgtagacctaccaca---------gctggggccgcgccgttaac +cgcggtcgctccggcccatgacaccccgccagtgcctgatgtcgactctcgcggcgccatcctgcgccgtca +gtataatctatcaacatctcccctcacctcttccgtggccactggcactaatctggttctttatgccgcccc +tcttagtccgcttttacccctccaggacggcaccaatactcatataatggccacggaggcttctaattatgc +cctgtaccgggttgcccgtgccacaatccgttaccgcccgctggtcccaaatgctgtcggcggttatgccat +ctccatctcattctggccgcagaccaccaccaccccgacgtccgtcgatatgaattcaataacttcgacgga +tgttcgtattttagtccagcccggcataacctctgagcttgtgattccaagtgagcgcctacactatcgcaa +ccaaggttggcgctccgtcgagacttccggggtggctgaggaggaagctacctctggtctcgttatgctttg +catacatggctcacccgtaaattcctacactaatacaccctataccggtgccctcgggctgttggacttcgc +ccttgagcttgagttccgcaaccttacccccggtaataccaatacgcgggtctcccgttattccagcactgc +tcgccaccgccttcgtcgcggtgcagacgggactgccgagctcaccaccacggctgctacccgctttatgag +ggatctttatttta---ctagtactaat---ggcgctggtgagatcggccgcgggatagcccttaccctttt +caacctcgctgacactctgcttggtggcctgccgacagaattgatttcgtcggctggtggccagctgtttta +ctcccgccccgttgtctcagccaatggcgagccgactgttaagctgtatacatctgtggagaacgctcagca +ggataagggtattgcaatcccgcatgatattgacctcggagaatcccgtgtggttattcaggattatgataa +tcaacacgaacaagatcggccgacgccttctccagccccgtcgcgccctttctctgtccttcgagctaatga +tgtgctttggctctc-----------------------------cctcaccgctgccgagtatgac------ +cagtctacttacggctcttcgactggcccagtttatgtttctgactctgtgaccctggt---taatgttgcg +accggcgcgcaggccgttgctcggtcgctcgattggaccaaggtcacactcgatggtcgccccctttccacc +at-----ccagcagtactcgaagactttctttgtcc-tgccgctccgcggtaagctctctttctgggaggca +ggtacaactaag--gccgggtacccctataattataataccactgctagtgaccaattgctcgctgagaatg +ccgccgggcac------cgggttgctat-ttctgcttacaccactagcctagg--------------tgccg +gccccgtttccatttc-tgcggttgctgttttagccccccactctgcactagcattgcttgaggataccttg +gact---------accctgcccgcg----cccatacttttgatgacttttgcccagagtgccgccctc---t +cggcctccagggctgcgctttccagtc--------cactgtcgctgagcttcagcgcct------------- +--------tgagatgaaggtgggtaaaactcgggagttatagttta-ttt------gttt----------gt +gcccccct--------tc------tttctg------tt-----------------gcttatt-t-------c +tcttttct----gcg----------------tttcgcgctccctg---------------------aaaaaa +aaaaaaa---------------aaa----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF480297.1/17302/1-7302 |Hepeviridae strain rabbit/R42/GER/2013, complete genome +----------------------------gcagacca-cgtaag-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcatcacaactgctattgag---caagccgctctagc +cgcggccaattcagccttggcgaatgctgtggttgttcggccgtttttgtctcggacacagactgagatcct +tattaatcttatgcaacctcgtcaactggtcttccgccccgaggtcttttggaatcatcctattcagcgtgt +tatccataatgagctggaacagta---ttgtcgggccc-gtgcggggcgctgtcttgaggtcggagcgcacc +cgagatctatcaatgacaatccgaacatcttgcaccggtgttttcttcgacccgttgggagggatgtccagc +ggtggtactctgctcccactcgtggccctgctgccaattgccgccgcaccgctttgcgtggactcccccctg +ttgaccgtacgtattgttttgacgggttctctggctgtgcttttgcagccgaaaccggcattgcactatatt +cactacatgacatgtggcccgcagatgtcgcggaggccatggctcgtcacgggatgacacgcctctatgctg +tactgcacctt-ccccctgaggtcttattgccaccaggtacctaccataccacctcctaccttctgattaat +gacggcagtcgcgttgttgtgacctatgaaggtgatactagtgctggttacaaccatgatgtctccattctc +cgcgcctggatccgcacgacaaaaatcgtcggtgagcacccattggtgatcgagcgtgttcgtgcgatcggc +tgtcatttcgtgttgctgcttaccgccgcacctgaaccgtcccccatgccctacgtcccctttccccgctcg +acagaggtgtttgttcgttcaatatttggcccggga---------ggttccccttccttgttcccatcggct +t----------gctctacaaaatcca-ctttccatgccgtccccgtgcacatttgggataggcttatgcttt +ttggtgctacactggatgaccaggccttctgctgttcgcggcttatgacttatcttcgcggcatcagctata +aagtcactgttggtgcccttgttgctaacgagggctggaatgcctctgaggatgcacttactgcggttatta +ccgcggcgtacctcactatctgccatcagcgctaccttcgcattcaggcaatctccaaaggtatgcgtcggt +tggaggttgagcacgcccagaagtttgttaccagactttatagttggctgtttgagaaatc---------cg +gccgtaactacattcccggtcgccagatccagttctacgcgcagtgccggcgctggctttctgccggcttcc +atctggacccgagagtacttgtctttgatgagtctgtgcattgc---cgttgcaggaattttgtaaagaa-- +----tgtggccgcgaaggcctgttgctttatgaggtggctcggtcagga------gtgtacttgttttctgg +----------------aacctgctgagggccttctcggtgaccaaggt--------catgacaatgaggcct +acgaggggtccgaggttgatcccgctgagcccgcctgctccgatatatcggggacttataccgtccacgggc +ggttgttgatggacctgtatagagcccttaatatcccacctgacctcgcagctcgagccgcccgcctgtcag +ccactgttgagcttgtcgccggccaagggcggcttgagtgtcgtactattttaggcaataagaccttccgca +ccataatcactgacggcgcccagctggaggcgaatggacc------------------------tgagcagt +acgtcctttcatttgatgaagcccgccagtgtatgggcgtcgggcagtgcagcctcgcgtatgagttaactc +ctagcgggctacgggtcaagatttcatgc-------aatggcttggactgtgcggcaatttttccc---ccc +gggcaggcccctcgcgccgaggctgcggatgtctcggccttctgtgccgcactgtatagatacaacaggact +atccagcggcactcgcttgttggtgggctgtggttacacccggaggggttgattggtctctttccacctttc +tctcccggccactactgggagtctgcaaatcctttttgcggtgaggggactctctacaccagaacctggtcc +acatccggcttttctagtgatttctcaccacctgaggcggccgctaatgccccacctcccgctagc------ +-ccgcctcatacgccagccacttctcaggctagggt-----------------tcgagcctt---------- +---------accgccgcct---------------------------------------------ctcgagat +ctctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------------tgcccgcccgcccgcctg-- +-ctgatgccgcccgg-------------------------------------ccctctactcataagctgcc +tggacaatc--------------------------------------tccagcccgtaaccgccgtc----- +-------------------tactttatacctacccagatggtgccaagatttattcggggtctttgtttgat +tcagactgtgactggctggttaacgcttctaaccctggccaccgcccgggcggtggcctttgccacgctttt +taccagcgcttccctcagtcct------ttgaccacaccaagttcattatgcgagacgg---gcttgccgca +tacaccctgtcgccccgtccgattattcatgcagtcgctcctgattatagagttgcacataacccaaagagg +ctggaggcagcgtaccgtgaaacttgctctcgtctcggcacagccgcctacccgctgctcggctcgggcatt +tatcaggtccctgtgggcccgagttttgacgcctgggagcgtaatcaccgacccggtgatgaactttatctc +accgagctagcgactgct-------------------------------------------------tggtt +cgaggctaatcggccggcccggtccctcatacccgtcacccctggcacggctttggccgatgatcccgcggt +cgtcgttggccctatgccggaggccgacgacggcccggaattgcccgccctgaccataacagaggatacagc +tc------------ggacggctaatcttgccttggagattg------------attctaaaactgaactggg +ccgtgcctgt---gctggctgtgccgtcagccctggggttgttcattaccaatttactgcaggtgtccccgg +gtctggtaagtcgaggtctatacagcagggtgatgttgatgtggtggtggtgcccacccgtgagctgcgcaa +cagttggcgccgtcgtgggtttgccgctttcacaccccattcggccgcccgtgtcactgctgggcggcgtgt +tgtaattgacgaagctccatcccttccacctcacctgcttttactgcatatgcaacgggcctcatctgtgca +tctccttggtgacccgaatcaaatacctgcaattgatttcgagcacgccggtcttgttcctgcaatccggcc +tgaactcgcccccaccagctggtggcatgtcacgcaccgttgccccgcagatgtttgcgagcttatacgcgg +ggcgtatccgaagatccagaccaccagccgtgttctgcggtccctgttctggggtgac------ccccctac +tggccagaaactggtttttacgcaggccgcaaaggccgccaaccccggtgcaattactgttcacgaggccca +gggggccacgtttacagagactactattatcgcgacggcagacgctaggggcctcattcagtcgtctcgggc +gcatgccattgtcgcgctcacccggcatacagagaagtgtgttattattgatgccccggggttgctccgtga +ggtgggcatatcggatgtgatagtcaacaacttc------------------------------ttcctggc +cggcg--gtgagatcggtcatcaccgcccctctgttatacctcgcggcaaccctgatccgaaccttcaaac- +-----ccttgaggctttccctccctcctgccagattagtgcttaccaccagctagctgaggagcttggccac +cggcctgcacccgtggccgccgtcctgccaccatgccccgaacttgagcagggcctgctgtacatgccacag +gagcttacggtgtctgacagtgtcttagtttttgagttaactgacatagttcattgccggatggctgcccct +agtcagcggaaggctgtcctctcgacgcttgttgggaggtacgggcgccgatcgaggttatatgaggctgcc +cattcggacgtccgtgagtcgcttacaaggtttattccgaccatcggccccgtgcaggccacaacctgtgag +ctttacgagctagtcgaggcaatggtggagaaaggtcaggacgggtcagctgtgcttgagcttgatctttgc +agccgagatgtgtcccgaataacgtttttccagaaagattgtaataagtttacaactggggagactattgcc +cacggcaaagtgggccaggggatatcagcttggagcaagacgttttgcgctctattcggcccctggtttcgg +gccattgagaaacagatactaaccttgctaccgcctaacatcttttacggcgacgcttatgaggataccgta +ttctctgcggccgtcactggtgctgggtctagtatg---gtatttgagaatgacttttcagagtttgatagt +acccagaataatttctcact------------------tggcctcgagtgtgtgcttatggaagaatgcggc +atgccccaatggttaattaaattgtcccagctggtccggtctgcttggattctacaggccccaaaggaatct +ctaaaaggattttggaagaagcactctggcgagcccggcacactcctctggaacaccgtctggaatatggcg +gtcatagcacattgttatgagttccgcgatttcaaggtcgccgcatttaaaggagacgactcggtagttctt +tgtagcgattaccgccagagtcgtttcgcggcggcccttattgcgggctgcgggcttaagcttaaagttgat +ttccgccccgccgggctctatgccggtgttgtgattgcccctggacttggtacgttgcctgatgtcgtccgg +tttgccggtcggctgtccgaaaagaactggggccccggccccgagcgagccgggcagttgcgcctggctgtc +tgtgattttttgagaaagctgacgaacgttgctcaggtttgtgttgatgttgtgtctcgtg-------tata +tggtgtgagccccgggcttgtgcataaccttattggcatgctgcagaccattgctgatggtaaagctcacta +cactgaaactgtgaagcctgtgttagatcttacaaattctattgtgtacaggatagaatgaataacatgtt- +t----------------tctgcatcgcccatggg------------gtcgccatgtgctctagggctatttt +gttgctgctcctcgtgtttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccggctggcc------------gccgtcgtgggcg-gcgcaacggcggtac +cggcagtg-gtttctggggtgacagg--gctgattctcagcccttcg----ccctcccctattttcat---- +--------------ccaaccaaccccttcgccgccgacgttaactcacatcccgggtctggagcccgcccac +ggcagccagcccg---------------cccccttggctcctcttggcgggacttgtccca----------- +------gcgcccctccgctaccccgcgccgtcgatctgcccca---------actggggctgcgccgttgac +cgccgtttcacccgcacctgatacggcgcctgtcccagatgttgattcacgtggggcaatcttgcgtcgcca +gtacaatctttcaacttcgcctttaacttctaccattgcctcaggtaccaaccttgttttgtatgctgcacc +gcttaatccccttttgcccctccaagacggtaccaacactcatatcatggcgactgaggcatctaattatgc +tcagtatcgggttgcccgcgctacaatccgttaccgccccttggtgcctaatgcagttggaggctacgcagt +ttccatctcgttttggcctcaaaccaccactacccctacctctgtcgacatgaactcaattacttcaaccga +tgttaggattcttgtccagcctggtctggcctccgagcttgttataccgagtgagcgcctccactaccgtaa +tcaaggctggcgctctgttgagacctccggtgtggctgaggaggaggccacttctgggcttgttatgctctg +tattcacggctctccagtgaattcatacaccaacaccccctatacaggggctttagggcttctcgattttgc +gcttgagatcgagttccggaatctgaccccagggaacactaacacacgtgtctctcggtattctagtactgc +ccgccaccgcttgcgccgtggtgccgatgggaccgccgaacttacaactacggcggctacgcgatttatgaa +agacctccacttta---ctgggatgaat---ggtgtcggtgagattggccgtggcatagccctcacgctgtt +taatatagctgatacacttcttggtgggttgccgacagaattgatttcggcggtcgggggccaggcattgta +ctcccgccctgtcccctcctcctatggcaatccgactgtgaaaatatatacatctcttgacaatgcgcagca +cgacaaggggatcgcgatacctcatgacattgatcttggcgattcccgtgttgtcatccaggactatgataa +ccagcatgaacaacaccggcccaccccctcaccagccccttcccgccccttttctgttttacgcgctaacga +tgtgttgtggctttc-----------------------------acttactgctgctgagtacgac------ +caatcggtatatggctcatcaactaaccccctgtatgtttcagataccgttacatttgt---taatgtggct +acaggcgctcaagctgtcgctcgctccctcgattgggccaaagtgaccttggatgggcgaccgctcaccacc +at-----tgagcagcattccaagaccttttacgttc-tccctcttcgtggtaagctctccttctgggaggct +ggaactactaaa--gctggctacccctataattataataccgtggctagcgaccaaattttagtcgaaaacg +cgtctgaccac------cgcgttgctat-ttctacttataccactagcctggg--------------cgctg +gccctgtttcaatttc-tgcagtcggtgtgcttgccccccattctgtcctagctgtccttgaggacactatt +gact---------atcccgctcgtg----ctcatacgtttgatgatttttttcctg-ccgccgtactc--tt +tggcctgccggggagggctttccaatc--------tactgatactgtggctcaccctct------------- +--------taagaagaaggtaggtaaaacccgggagtcttaattaa-tt----ct-tgtt----------gt +cccc-ccct-------tc-tata-ttgct---tgc-tt--------------------tatc-t-------c +ttatttct----gcg----------------ttccgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaaaaaaa----------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF480298.1/17283/1-7283 |Hepeviridae strain rabbit/U46/GER/2013, complete genome +----------------------------tggcgctt-ggtatg-------------t-----ggtcg----- +----atggaggcccatcagttcattaaggctcctggcatcacaaccgctattgag---caagctgctctagc +tgcggccaattctgccttggcgaatgctgtggttattcggccgtttctatctcggacacagactgagatcct +tatcaatcttatgcaaccccgccaattggtctttcgcccggaggtcttttggaaccaccctatccagcgtgt +catccataatgagctggagcagta---ttgtcgggccc-gtgcggggcgttgtcttgaggtcggagcacatc +ccaggtctattaatgataacccaaacatcctgcatcgatgctttcttcggcccgccgggagggatgtccagc +ggtggtattctgcccccacccgtggccctgctgccaactgtcgccgctccgcgctgcgtggcctcccccctg +ttgatcgtacctactgctttgatgggttctccggctgtgcctttgcagctgagaccggtatcgctctatact +ccctacatgacatgtggcccgctgatgtcgcagaggcgatggcgcgtcacgggatgacgcgtctgtacgctg +tgctgcacctc-ccccctgaggtccttttgcctccaggcacttaccatactacttcctaccttctgattcat +gacggcagtcgtgccgtcgtaacttacgaaggcgatactagtgctggctataaccatgatgtctccactctt +cgtgcttggattcgtacaacaaaaattatcggtgatcaccccttggtgattgagcgcgtccgtgcgattggc +tgtcattttgtgttgctgcttactgctgcccccgaaccttctcccatgccctatgtcccctttccccgttcg +acagaggtgtttgtccgctcaatattcggcccagga---------ggctccccctcccttttcccgtcagct +t----------gctctacaaaatcaa-cttttcatgccgtccctgtgcacatttgggataggcttatgctct +ttggtgccaccctggatgaccaggccttttgctgctcgcggcttatgacttacctccgtggtatcagttata +aagtcactgtcggcaccctcgtcgctaacgagggctggaatgcctctgaggatgcactcaccgcagtcatta +ccgcggcgtacctcactatctgtcatcagcgctacctccgcacccaagcgatctccaagggtatgcgccggt +tagaggttgagcatgcccagaagtttattactcggctttatagctggctgtttgagaagtc---------tg +gccgtaactatatccctggccatcagatccagttttatgcgcagtgccggcgctggctatctgccggctttc +atttggatcctagggtacttgtttttgatgagtccgtgcactgt---cgttgtaggagctttgtgaggag-- +----tgtcaccaagaaggtttgctgtttcatgagatggcttggtcagga------gtgcacttgtttcttgg +----------------agcctgcggagggtctcttaggtgaccagggc--------catgacaatgaggctt +atgagggatctgaggttgacccggctgagcccgccctccccgatatatcggggatttacaccgttcacgggc +ggctgttgacagacctatatagagcccttaatattccacctgatctcgctgcccaggccacccgcctgtcag +ccactgtcgagcttgtcgccagtcagggaaggcttgagtgtcgcaccattctgggtaacaagaccttccgca +ccgtagtcaccgatggtgcccagctagaggcaaatggccc------------------------cgaacagt +atgttctatcatttgatgaggcccaccagtgcatgggtgttgggcaatatagcctcgcgtatgagctaaccc +ccggcgggttacaggtcaaaatctcgtgt-------aatggcctggactgtgtggcagtcttcccc---cct +gggcgggcccctggcgttggggctgcagaggttacggccttctgtagtgccctatatagatacaacagggct +gttcagcggcactcgcttgttggtgggctgtggctgcacccggaggggcttctgggtcttttcccgcccttc +tcccccggtcatttctgggagtccgcgaatcccttctgcggtgaggggactctttatactagaacttggtct +acgtccggcttttctagtgatttctcaccacctgaggctgtcgctaacatcccccctccctctagt------ +-gcgccccacacgcaggctccccctgaggcaggcgt-----------------acaagcctt---------- +---------accgccgcct---------------------------------------------ctcgagac +ctctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------------gacctactcatttgctcg-- +-ccgacagccccggg-------------------------------------ccttctattcataagccgcc +ggggcgccc--------------------------------------cttagctcgtaaccgccgct----- +-------------------tactttacacctacccagatggcgctaagatttattcggggtccctgtttgag +tcagattgtgactggttggttaatgcatctaaccccggccaccgccctggcggtggtctttgccatgccttt +taccagcgcttccctcagtcct------tcgaccatagcaagtttattatgcgggacgg---gcttgccgca +tataccttgtcgccccgcccgatcattcatgcagttgcccctgactacagagccgcacataacccaaagagg +ctagaggcagcataccgtgagacctgctcccgccttggcacagctgcctacccgttgctgggttcgggtatc +taccaggtccctgtcggcccgagttttgacgcttgggagcgtaaccaccggcctggtgatgagctttatctt +accgagcctgcaactgct-------------------------------------------------tggtt +tgaggctaacagaccggcccggccccttatacccgccgtctctgacatggccccggctgatgaccctgcagt +cggggccggcccccaaccagaggccgccgatggcccggagctacctgccctcactataacagaggatgcagc +tc------------ggacggctaaccttgccctggagattg------------actctagaaccgagttggg +ccgtgcttgt---gttggctgtgccgtcagtcccggtgttgttcgctaccaatttaccgcgggtgtacctgg +gtcgggtaaatcgaggtctatacagcagggtgatgttgatgtggtggttgtgcccacccgtgagctccgtaa +cagctggcgtcgccgcgggtttgctgcattcacaccccattcagccgcccgtgttactggcggtcgacgtgt +tgtaattgatgaggctccatctcttccgccccacctgcttttgctgcacatgcagcgggccgcatctgtgca +cctacttggtgatccaaaccagatacctgcgattgattttgagcacactggtcttgtccccgcaattcggcc +tgaactcgcccccactagttggtggcatgtcacgcaccgttgccccgcggatgtctgtgagctcgtacgcgg +ggcataccctaagatccagactaccagccgtgtcctgagatccctgttctggggccat------ccccccat +tggccagaagctggtttttacgcaagccgcaaaggctgccaaccccggcgcaatcaccgtccatgaagctca +gggggctacgtttacagagaccactgttatcgcgacggctgatgctagaggcctaatccagtcgtctcgggc +gcatgctattgttgcgctcactcggcatacagagaagtgtgtcatcattgatgctccggggttacttcgtga +ggtgggcatatcggacgctatagtcagtaacttt------------------------------ttcttagc +cggcg--gtgagatcggccaccaccgcccttctgttataccccgcggtaaccctgatcggaaccttgaaac- +-----ccttcaggcttttcccccttcttgccagattagcgcttaccaccaattggctgaggagctcggccac +cggcccgcgcccgtggctgccgtcctgccgccctgccctgagcttgagcaggggctgctttacatgccgcag +gagctcacagtgtctgacagtgttttggttttcgagctaaccgacatagtccactgccgcatggctgcccct +agtcagcggaaagctgtcctctcgacgcttgttgggaggtacgggcgtcgatcgagactgtatgaggccgct +cattcagatgtgcgtgagtcactcacaaggtttattgccatcattggccctgtgcaggccacgacgtgcgag +ctttacgagctggttgaggcaatggttgagaaaggccaagatggttcagctgtgctcgagcttgacctctgt +aaccggatattgtgtctcgtaacggttacccagaaagactgtaataagtttccaaccggggagactattgcc +cacggcaggtcttgcgtaggtacatcgagtaggtacaagaccttttgcgctctattcagaatgggacaccga +gccattgagaaacaagtgctagctttgctcccaccaaacatcttttatggtgatgcctttgaggactccgtg +ttttctgcagctgtcaccggtgggggttctagtatg---gtgtttgagaacgacttttcagagtttgacagc +acccagaacaacttttcact------------------tggccttgagtgcgtgattatggaggaatctggt +atgcgacagcggctagttagattgtaccacctggttcggtctgcctggattctacaggccccgaaggagtct +ttaaagggattttggaagaagcattccggcgagcccggtacactgctttggaacaccatttggaatatggcg +gtcatagctcattgctatgaattccgcgatttcaaggccgccgcgtttaaaggaaacgactcggtggtcctc +tgcagtgattaccgccagagtcgcttcgccgcggctcttgttgccggctgtgggcttaagcttaaagttgac +tttcgtcccatcgggctctatgccggtgttgtggtcgctcctggtcttggtacgctgcccgacgtcgtccgg +tttgctggtcggttgtcggagaagaattggggccccggccctgagcgggccgagcagttgcgcttggctgtc +tgtgatttcctgaggaagttgacgaatgttgctcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggtgtgagccccgggctcgtgcataaccttattggcatgctgcaaaccattgctgatggtaaagctcatta +tactgagactgtgaagcctgttctcgatcttacaaattctattctacagaggctagaatgaataacatgta- +g----------------tttgcatcgcccatggg------------atcgccatgcgccctcgggctattct +gttgctgctcttcgtgtttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagtcggctggcc------------gccgtcgtgggag-gcgcggcggcagttc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctattttcat---- +--------------ccaaccaaccccttcgccgccgacgttgactcacattccgggtctggagcccgttccc +ggcagccagcccg---------------cccccttggcacctcttggcgcgacctgtccca----------- +------gcgccccacagctaccccacgtcgtcgacctgcccca---------gctggggctgcgccgttgac +tgctgtttcacccgcacctgacacagtgcccgttccagatgttgattcccgtggagcaatcctacgccgcca +atacaatctatcgacttcacctttaacttcaactgttgcctcaggcactaaccttgttctgtatgctgcacc +gcttaaccctctcctgcccctacaggatggtaccaatactcatatcatggcgaccgaagcatccaattatgc +tcaatatcgggtcgttcgggctacgatccgttatcgccctttggtgcctaacgcggttggcggctatgcaat +ttctatttcgttttggcctcaaactaccaccacccctacctctgttgatatgaattcaattacctctaccga +cgtcaggattcttgtccaacccggtctggcctccgagcttgttataccgagtgagcgcctccattaccgtaa +ccagggatggcgctctgtcgagacctccggtgtagctgaggaggaggccacttccgggcttgtcatgctctg +cattcatggttcccccgtaaactcatacactaataccccttacacaggggctttggggctccttgatttcgc +gcttgagattgagtttcggaatctgactccggggaacactaacacacgtgtctcccggtacactagtactgc +ccgccatcgtctgcgtcgtggcgccgacgggaccgctgagcttacaaccacagcggccacacgctttatgaa +agatctttacttca---ccgggatgaat---ggggtcggtgaaattggccgtggcatagccctgacgctgtt +caacttagctgatacacttcttggtggtttgccgacagaattgatttcgtcggccgggggtcaggtattcta +ctcccgtcctgtcgtctcagccaatggcgagccgactgtcaaattatatacatcagttgagaatgcgcagca +ggacaaggggatcgcgatacctcatgacattgatcttggtgattcccgtgttgtcatccaggactatgataa +ccagcatgaacaagaccggcccaccccctcaccagccccttcccgccccttttctgttttacgcgctaacga +tgtgttgtggctttc-----------------------------acttactgctgctgagtacgac------ +caatcggtatatggctcatcaactaaccccctgtatgtttcagataccgttacatttgt---taatgtggct +acaggcgctcaagctgtcgctcgttccctcgattgggccaaagtgaccttggatgggcgaccgctcaccacc +at-----tgagcagcattccaagaccttttacgttc-tccctcttcgtggtaagctctccttctgggaggct +ggaactactaag--gctggttacccctataattataataccgttgctagcgaccaaattttagtcgaaaacg +cgtctgaccac------cgcgttgctat-ttctacttataccactagcctggg--------------cgctg +gccctgtttcaatttc-tgcagtcggtgtccttgccccccattctgtcctagctgtccttgaggacactatt +gact---------atcccgctcgtg----ctcatacgtttgatgatttttgccctgagtgccgtattc---t +tggcctgcagggttgtgctttccaatc--------tactgttgctgagcttcagcgtct------------- +--------taagatgaaggtaggtaaaacccgggagtcctaattaa-tt----ct-tgtt----------gt +cccc-ccct-------tc-tata-ttgct---tgc-tt--------------------tatc-t-------c +ttatttct----gcg----------------ttccgcgctccctg---------------------gaaaaa +aa---------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>KU980235.1/17250/1-7250 |Hepeviridae isolate hGER150031, complete genome +----------------------------gcagacca-cgcatg-------------t-----ggttgatgc- +---catggaggcccatcagtttatcaaggctcctggcattactactgccattgag---caggctgctctggc +cgcggccaattctgccttggcgaatgctgtggtggttcggccgtttttatcccgtgtacagactgacatcct +cattaatttgatgcaaccccggcagcttgtgttccggcctgaggtcttttggaaccacccgatccagcgagt +catacataacgagctagagcagta---ctgccgagctc-gtgctggccgctgcctcgaagtgggtgcccacc +cgaggtccatcaatgacaaccctaatgttttgcaccggtgtttcctccgtccggtcggaagagatgtccagc +ggtggtattccgcccccactcgcggcccagcggctaactgccgccgttccgcactacgcggtctgcctcctg +tcgatcgtacatattgcttcgacgggttctcccgctgtgctttcgccgccgagaccggaattgcactatact +cattgcatgacctttggccttctgacgttgcagaggctatggcccgtcacgggatgacgcgcttgtacgctg +ttctccaccta-ccccctgaggttttactaccacccggtacctatcacacaacctcttaccttctgattcac +gacggcgaccgtgccgtcgtgacctacgagggggatactagtgcgggctataatcatgatgtgtccatactt +cgtgcttggatccgaaccaccaaaatagttggagatcacccactcgtgatagagagggtccgtgcaattggc +tgccattttgttctgctcctaactgcggcccctgagccatctcctatgccttatgttccataccctcgttcg +acggaggtgtacgtcaggtccatatttggccctggc---------gggtcgccttctctcttcccgtcagcc +t----------gttctactaaatcaa-cattccatgccgtcccagtccatatatgggaccggcttatgcttt +ttggtgccactctggatgaccaggccttctgctgttcacggcttatgacctatctccgcgggatcagctata +aagtgaccgtcggcgcgcttgtagccaatgaaggctggaatgcctctgaggacgcgcttaccgctgtgatca +ctgcagcgtatttgactatctgccaccagcgctacctccggactcaggctatttctaaaggtatgcgccggc +tagaagttgagcatgcccagaagtttatcacaaggttatatagctggttatttgagaagtc---------ag +gccgtgactatatccctggtcgccagcttcagttctatgcacagtgccgccgctggctctcggctggcttcc +acctagaccctagagttcttgtttttgatgaggcggtcccctgc---cgctgccggagctttttaaagaa-- +----agccgctggcaaattctgttgttttatgaaatggttggggcagga------gtgcacctgttttctgg +----------------agccggcggaaggcctggttggcgactgcggt--------catgacaatgaagcct +acgaggggtctgaggtggaccccgccgagcccgcccacgttgacatttctgggacttacgcggtccacggcc +gccagcttgaggccctttatagggcgctaaatattccacatgaaattgcggcccgtgcgtcacgtctgacag +ccactgtggaacttgctgccagcccaggccgactcgagtgccgtacggtgctcgggaacaagactttccgta +catcaataacggatggcgcccaccttgaagccaacggccc------------------------cgagcagt +acgtcttgacatttgatgactctcgtcagataatgggagcggggcctcacagccttacgtacgaactcgtcc +ctgccggtttgcaggtcaaaatatcttct-------aatggcctggactgtactgcagtattcccc---cct +ggcggggcgccaagcgctgctccgggtgaggtagcggccttttgcagcgccctatacagatacaataggttc +acccagcgccattcgataaccggtgggctatggctgcaccctgaggggctccttggtctgttcccccctttt +tcccctgggcacctctgggagtctgcgaatcctttttgtggtgagagtacactttatactagaacttggtct +acatctggtttctctagtgatttttccccccccgaggcggctattgccgctccaacccccggtat----ggg +gttaccttcgggtaccccctcgtctgctagtgatgt-----------------ctgggtctt---------- +---------tccgccgccc----tctgaggggt--------------cggcggttgtcttgccacccgaagc +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ccagtaggcctactagcccacctagt +cttatcacacctggg-------------------------------------ccccccgctcataagccacc +cacaccgcc--------------------------------------accggcttgcacccgccggc----- +-------------------ttctctatacctaccctgatggtgccaaggtgtatgcaggctctttgttcgag +tcagattgtgtctggctggttaatgcatctaaccctggtcaccgccctggcggcggcctttgccatgcattt +taccagcgttttccggagtcgt------tccatccgactgactttgtcatgcgtgaggg---ccttgccgca +tataccttgagcccacgcccgatcatccatgctgtagctcccgactatagggttgagcagaaccctaagagg +ttagaagcggcataccgtgagacttgctcccgcctcggcacagctgcctacccgctgctggggtcggggatc +taccaggtccccgtaggtttaagttttgatgcctgggagcgtaaccatcgcccgggtgatgaactttacctc +actgaaccggccgccgcc-------------------------------------------------tggtt +cgaggctaataaaccgaccca--------------------------------------------------- +------------------------------------------accggccttgacaatcactgaggacaccgc +tc------------gtacagctaaccttgcgcttgagattg------------attccgccacggaggtggg +ccgtgcctgc---gccggctgtactgtcaaccccggggttgtccattaccagtttaccgccggggtccctgg +ctccggtaaatctaggtccatacagcagggggatgttgatgttgtggttgtgccaacccgtgagctccgtaa +cagctggcggcgccgcggctttgccgccttcacgcctcacacagcggctcgtgttactgccggccggcgtgt +tgtgatagatgaggcaccttcgcttccaccgcatctgctgctgcttcatatgcaacgagcctcatcggttca +ccttcttggtgaccctaaccagattcctgctattgattttgagcacgctggtctggtcccggcaatccgccc +tgagcttgccccgactagttggtggcatgtcacccatcgttgccccgccgatgtgtgtgagctcatacgtgg +ggcttacccaaagatccagacgactagtcgtgtgctgcgatctttgttttggaatgag------cctgcagt +gggccagaagttggtttttacgcaggctgccaaagcagccaaccctggtgcaattaccgttcatgaggccca +gggtgccacatttacagagactaccattatagccacggccgacgctaggggtctcatccagtcttcccgtgc +acacgccatcgttgcgcttacccgtcatacagaaaaatgtgtcatcttggatgcccctggcctactgcgtga +agtcggcatttctgatataattgttaataatttc------------------------------ttcctggc +cggtg--gtgaagtgggccaccatcgcccttccaccataccccgtggcaacccggatcagaatttagacac- +-----tcttcgggctttccccccatcctgccagattagcgcttaccaccagctggctgaggagctgggtcac +cggccagccccagtagccgccgtcctgcccccttgcccagagctcgagcagggcttactctatatgccgcag +gaactcacagtttctgatagtgttttgatctttgagctcacggacatagtccattgtcgtatggctgccccc +agccaacgcaaggcagtcctttcaacgctcgtcggcaggtacggccgtcgaacgaagctgtatgaagcagct +cactctgacgtccgagagtccttggggaggttcatccctactatcggaccggtccaggccaccacgtgtgag +ctatatgagctggttgaggccatggtggagaagggtcaggatggctctgctgtgcttgagcttgacctctgt +agccgtgacgtttcacggatcacattcttccagaaggattgtaataaattcacaacaggggagaccatcgcc +catggtaaggtgggtcagggcatttcggcttggagcaaaaccttttgtgccctatttggcccgtggttccgt +gccattgagaaggagatcttggctctgctcccgcctaacattttctatggtgacgcctacgaggagtcggtg +ttctctgcagccatttctggagcgggcaccagtatg---gtctttgaaaatgatttctctgaatttgatagc +acccagaataacttttctct------------------tggccttgagtgtgtcattatggaagagtgtggc +atgccccagtggcttatccgattgtaccatttggttagatcagcctggaccctgcaggccccaaaagagtct +ttgaaaggtttttggaagaagcattctggagaacctggtactctcctctggaatactgtttggaacatggcg +attatagcgcattgctatgaattccgtgatttgagagtggcagcgtttaagggtgatgattcagtggttctc +tgtagtgactaccgccagagccgtaatgcggctactttgatagctggttgtggactgaaactgaaggtcgat +taccgtcctataggtctgtatgccggcgttgtggttgctccgggcctcggggcactccctgatgtcgtccgg +ttcgccggccgattatccgagaagaactggggtccgggccccgagcgcgccgagcagttacgcttagcagtc +tgtgatttcctccgagggttaacgaatgtggcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtacataaccttattggcatgctccagactattgctgatggaaaggcccattt +tactgagacagtcaagcctgtgttggatcttaccaactctatcatacagaggttagaatgaataacatgtc- +c----------------tgtgcatcgcccatggg------------atcgtcatgcgccctagggctgttct +gttgctgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagtcgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtttcacaatccggggctggagctcgccctc +gacaaccggcccg---------------cccccttggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgccgccccccgtcgtcgatctgcccca---------gctggggctgcgccgttaac +tgctgtttcacccgcgcccgatacggccccagtccctgacgtcgattctcgtggtgctatcctgcgccgcca +gtataatctgtctacttcccctttaacttcatctgttgcttctgggactaaccttgttttatatgccgcccc +gcttaaccctctcctgcccctccaggatggcaccaacactcacatcatggcgactgaggcgtctaactatgc +ccagtaccgggttgttcgggctactatccgctaccgccctttggtgcctaatgctgtcggcggctatgcaat +ctctatctctttctggccccagactacaactactcccacctctgttgatatgaattctatcacctctactga +tgttagaattttggttcagcctggcatagcctctgagttggtcatcccgagtgagcgtctccactatcgaaa +tcaaggttggcgctctgtcgagacctcgggtgtggccgaggaggaggcgacatcgggtctggttatgctttg +tattcatggttctcctgttaactcttacactaacacgccctacactggggcgttgggactccttgattttgc +acttgagcttgaatttagaaatttaacccctgggaacaccaacacccgtgtatcccgctatactagtacggc +ccggcaccgtttgcgccgtggtgctgatggtacggccgaacttacaactactgcagccacacgttttatgaa +ggacctgcacttca---ccgggacgaat---ggggttggtgaggtgggccgtggtatagccctgacgttatt +caatcttgctgacacacttctcggcggtttgccgacagaattgatttcgtcggccggaggccaactatttta +ctcccgcccggttgtctcagccaatggcgagccaactgttaagttgtacacctctgttgagaatgcacagca +ggacaaaggcattgctataccacatgatatagatctaggagattcccgtgtggttatccaagattatgataa +ccagcatgagcaggatcggcctaccccgtcgccggccccgtctcgtcctttttcggtcctccgggccaatga +tgttttgtggctctc-----------------------------cttgactgcagctgaatatgac------ +cagaccacctatggctcgtccaccaaccccatgtatgtttcagataccgtcacatttgt---taacgtggcg +actggtgctcaagccatcgcccgttcccttgattggtccaaggttactctagatggccggcctcttaccact +at-----ccagcagtactctaaaacattctatgtgt-tgccgcttcgtggtaagctttccttctgggaggct +ggtacgactaag--gctggctatccttataactataataccactgctagtgaccagattttgattgagaatg +cagccggccat------cgtgttgccat-atctacttatactactagccttgg--------------tgctg +gtcctgtatctgtttc-cgcggtcggcgtccttgccccgcattctgctttagctgtgcttgaagatactatt +gact---------atcccgctcgtg----ctcatacttttgatgacttttgccctgagtgccgtaacc---t +tggcctacagggttgtgcttttcagtc--------cactattgctgaacttcagcgcct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt-----t-tct--att------gt +gccc-cct--------tc-taag-gt-tt----gc-tt-tatt--------------------t-------c +ttttttct----gcg----------------ttccgcgctccctg---------------------ggcaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------aaa--------------------------- +------------------------------------------------------------------------ +----------- +>KX172133.1/17237/1-7237 |Hepeviridae isolate hGER150030, complete genome +---------------------------gcag-acca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggcttctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagttggtttttcgacctgaagtgctctggaatcatcccatccaacgggt +tatccataatgaacttgaacagta---ctgtcgggccc-gggctggtcgttgtctagaggttggggcccacc +caagatccattaatgacaacccaaatgttctgcaccggtgtttcctacgaccagttgggagagatgttcagc +gttggtactctgctcccactcgcggccccgcggctaactgccgccgctctgctttgcgtggcctcccccctg +ctgatcgaacctattgttttgatggattctcccgctgcccatttgccgcagaaactggggtagccctttatt +ctctgcatgacctctggccggccgatgttgcagaggctatggcccgacacgggatgacacgcttgtatgctg +cactacatctc-cctcctgaggtactactaccacctggtacttatcatacaacttcataccttctgattcac +gacggtgatcgtgctgttgtgacctatgaaggcgatactagtgcaggctacaaccatgatgtttccatactc +cgtgcatggatccgcacaactaagatagtcggcgatcatccgctggtgatagagcgtgtgcgggctattggt +tgccatttcgtgttactgcttactgcagcccctgagccgtcaccaatgccttacgttccatacccccggtcg +acagaggtgtatgtccgctctatattcggccctggc---------gggtccccatccctattcccatcagct +t----------gctctacgaaatcca-catttcacgctgtcccggttcacatttgggaccggctcatgcttt +ttggcgctactctggatgatcaggcgttttgctgttcacggcttatgacctacctccgcgggattagctaca +aggtcactgttggtgcccttgttgctaatgaggggtggaatgcttcggaggacgctcttactgctgttatta +ccgcagcgtatctgaccatttgccatcagcgttacctccgtactcaagctatatccaagggtatgcgtcgac +tggaggttgagcatgcccaaaaattcattacaagactttatagttggctgttcgagaagtc---------cg +gccgtgactacatccccggccgccagcttcagttttacgcacagtgtcgccgttggttatcggcaggttttc +atcttgatccaagggtgcttgtttttgatgaatctgtgccctgc---cgttgtaggacatttcttaagaa-- +----ggctgtgggtaagttctgctgttttatgaagtggttgggtcagga------gtgtacctgttttttgg +----------------aaccagcagagggtctagttggcgaccacggt--------cacgataatgaagcct +atgagggctctgaggtcgatcaggccgaacccgcccatctcgacgtttctgggacctatgccgtccatggcc +gccaacttgaggccctgtatagagcgcttaacatcccgcacgacatcgctgcccgagcctcccgtttgactg +ccaccgtcgaactcgttgcaggtccagaccgtttggagtgccgtactgtactcgggaacaagactttccgga +cgacggtggttgatggcgcccatcttgaggcgaacggccc------------------------cgagcagt +acgttctttcgtttgacgcctctcgccagtccatgggggccgggccgcatagtctctcctacgagctcactc +ctgctggtttgcaggtcaagatttcatct-------aatggcctggattgcactgcaacattcccc---ccg +ggcggggcccctagcgctgctccgggagaagtagcagctttttgcagtgccctttacaggtacaacaggttc +actcagtgccattcgctcgtaggtggcctgtggctgcatcctgaggggttgttgggtatcttcccccctttt +tctcccgggcacctctgggagtccgctaaccctttttgtggggagggaactttgtacacccgtacatggtcg +acatctggcttttctagtgacttctccccccctgaggcagccgttgtagcgccggctgctacccc----ggg +gctgcgcc---accctacacctcctgttagtgacat-----------------ttgggtgtt---------- +---------accgccatcc----tctgaagaac--------------ttcaggttgacacagcgcccgcccc +cccta------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcccgctcaaccgtccagc +cctgttgggccaaag-------------------------------------gcccccgtgcgtaagccgcc +aatgccacc--------------------------------------acccccgcgcacccgccgcc----- +-------------------ttctttacacttatccggatggggcaaaggtgtatgcggggtcactgtttgag +tctgactgtgattggctggttaatgcatcgaatcccggccatcgccctggaggtggcctttgccatgccttc +taccaacgttaccccgagtcct------tccacccaactgagttcattatgcgcgacgg---tcttgccgcg +tacactttaactccccggcctattattcatgcagtggctcctgactatagggttgagcataacccaaagagg +cttgaggcggcgtaccgagagacctgctctcgccgcggtactgccgcctacccactcctcggttcaggtata +taccaagttcccgtcagcctcagctttgacgcttgggagcgtaaccatcgccccggggatgagctctaccta +accgacctcgccgctacc-------------------------------------------------tggtt +cgaggctaataagccggcaca--------------------------------------------------- +------------------------------------------gccggccctcacaataactgaggatgcagc +cc------------gtacagccaacctagcactggagatcg------------atgctgctacggaggtcgg +ccgggcttgt---gccggctgcgcagttagccctggggttgtgcactatcagtttactgctggggttccggg +ctcggggaagtcacgttctataaagcagggggatgttgatgtagtggttgtccccactcgggagctccggaa +tagctggcgtcgccggggttttgcggcttttacacctcatacggcggcccgtgtcaccacgggccgtcgtgt +tgtgattgatgaagccccatctctcccaccgcatttgttgctactacacatgcagcgggcttcgtcggtcca +tcttctcggcgacccaaaccagatccctgccatagacttcgatcacgccggcttggttcccgcaatacgccc +tgagcttgcgcccaccagttggtggcatgttacccaccgctgccccgctgacgtatgtgagcttatacgcgg +ggcttatcctaaaatccaaaccactagccgtgtgctgcggtctttattctggaatgag------cctgccat +cggccagaagttagttttcacccaggctgctaaggctgccaaccccggtgcgattacagtccacgaggccca +gggcgccactttcacggaaactacaatcatagccacggctgatgctagggggctcatccaatcttcccgagc +tcatgccattgtcgcacttacccgccacacagagaagtgtgttattcttgatgcccctggcttgttacgtga +ggtcggtatatcggatgtgattgtcaacaatttc------------------------------ttccttgc +cggcg--gggaggtgggtcaccatcgcccctctgtgatacctcgcggcaatccagaccagaacctcgcgac- +-----actacaggcctttccaccttcctgccagattagtgcctatcaccagctagctgaggagcttggtcac +cgcccagcccccgttgccgctgtcttgcccccttgccctgaacttgaacagggcctgttatatatgcctcag +gagcttacggtgtctgatagcgtgctggtttttgagctcacggacatagtccactgccggatggccgccccc +agccagcggaaggccgtcctatcgacgctcgtgggtaggtacggccgtcggacgaagctgtatgaagcagct +cattctgacgtccgtgagtccctggctagattcatccccaccattgggcccgttcaggctactacctgtgag +ttatatgagctggttgaggccatggtagagaagggccagaatggctctgccgtgcttgagctcgacctctgc +aatcgtgatgtatcgcgtatcacatttttccagaaagattgtaacaaattcaccacaggggagaccattgcc +cacggtaaggtcggccagggcatctcggcttggagtaagaccttctgtgccctgttcggtccgtggtttcgt +gctattgaaaaagaaatattagccctactcccgcctaatattttctacggtgacgcatacgaggagtctgtg +tttgccgccgctgtgtcgggggcaggttcaagcatg---gtgtttgagaatgatttttcagagtttgatagc +acccaaaataacttctccct------------------tggtctcgagtgtgtagtcatggaggaatgtggc +atgccccagtggctaatccggttgtaccatttggtccggtcggcctggatcctacaggcgccgaaggagtct +cttaagggattttggaagaagcattctggtgagcccggcacccttctctggaataccgtttggaatatggcg +atcatagcacactgctatgaatttcgtgattttagggttgccgccttcaagggggatgattccgtggtcctt +tgtagcgactaccgtcagagccgcaatgcagcggccctgattgcaggttgcgggctcaaactgaaggttgat +tatcgccctattgggttgtatgctggtgtggtggtggcccctggcctgggaacgctgcccgatgtggtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggctgagcagttgcgcctagctgtt +tgtgactttcttcgagggttaacgaatgttgcgcaggtatgtgttgatgttgtatcccgag-------ttta +tggagttagtcctgggttggtacataaccttattggcatgttgcaaaccatagctgatggcaaggcccattt +tacagagactgttaaacctgtgcttgacctcacgaactctatcatacagcgggtagaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtaccgcaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgcgaccagtccca----------- +------gcgcccctccgctgtcccacgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgccgtatcacctgctcccgatacagctcctgtacctgatgttgactcgcgcggcgccatactgcgacgcca +gtacaatttatccacatccccgcttacatcatctgtcgcttcgggtactaacttggttctttatgctgctcc +gctaaaccctttgctgcccctccaggatggcactaacactcacatcatggccactgaggcatctaattatgc +ccagtatcgggttgtccgagctacgatccgttacaggccattggtgccaaatgctgtcggcggctatgcaat +atccatctcattctggcctcagactaccactacccccacgtctgttgatatgaactctattacttccactga +tgttaggattctagttcagcccggcattgcttctgagttggtcattcctagtgagcgcctccattaccgtaa +ccagggctggcgctctgtggagacctcgggtgtggctgaagaggaggctacttctggtttggtaatgctttg +tatccatggctcccctgttaattcctacactaataccccctataccggggcgcttggactccttgatttcgc +cttagagcttgagtttaggaatctgacacccgggaacaccaacacccgtgtgtcccggtatacaagcacagc +ccgtcatcggctgcgccgcggtgctgatggcaccgccgaacttaccaccacagcggccacgcgtttcatgaa +ggacctgcatttca---ccggtacgaat---ggggtcggtgaggtgggtcgtggtattgctctcacactctt +taatcttgctgacacgcttctcggtggtttgccgacagaattaatttcgtcggctgggggacagttattcta +ctcccgccccgttgtctcagccaatggcgagccgactgtcaagttatacacatctgtagagaatgcgcagca +ggataaagggatcgctatcccacatgacatagatctgggtgactcccgtgtggtcatccaagactatgacaa +ccagcatgagcaggatcgacccaccccctcgcctgccccttctcgccctttttcggttcttcgcgctaatga +tgttctatggctttc-----------------------------tcttactgccgccgagtacgac------ +cagactacatatgggtcgtccactaacccgatgtatgtctcggatactgtcacatttgt---caacgtggcc +acaggagcccaggctgtcgcccgttccctcgactggtctaaagttactttggacggccgccctcttactact +at-----ccagcaatactccaaaacattttatgttc-tcccgctccgcgggaagttatccttttgggaggcc +gggacgactaag--gccggctacccctataattacaacacaactgctagtgatcagattctgatcgaaaatg +cagctggtcat------cgtgtcgccat-ttccacgtacaccaccagcttggg--------------cgctg +gccctgtgtctgtctc-tgcagtcggtgttttagccccacattcggctcttgcagtccttgaagacactatt +gact---------accctgcccgtg----cacacacttttgatgatttctgcccggagtgtcgcgctc---t +tggtttgcaggggtgtgccttccaatc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattaa-tt----t--cctt---t------gt +gccc-cct--------tc-atag-ctttt----gc-tt---t----------------attt-c-------- +tttcttct----gc----------------gttccgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaa----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MG211751.1/17291/1-7291 |Hepeviridae isolate 1, partial genome +----------------------------gcagacca-cgttag-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcatcactaccgccattgag---caagctgctctggc +tgcggccaattcagccttggcgaatgctgtggttattcggccgtttctttcccgggtacagacagagattct +tatcaatttaatgcaaccccgacagctggttttccgycctgaggttttctggaatcatccgatccagcgtgt +catacataatgagctggagcaata---ctgtcgggcta-gggcagggcgctgtcttgaggttggtgcccacc +ctagatctatcaatgacaaccctaatgtactgcatcgatgctttcttaggccagttgggcgagatgttcagc +gttggtataccgcccccacccgcggccctgcggctaactgccgacgctctgcactgcgtggccttcctgctg +ttgaycgtacctactgttttgacggtttctccgcctgtgcgtttgcagccgagaccggtattgccctctact +ctttacatgatctgtggcccgctgatgtcgcagaggcgatggcacgccatggaatgacacgcctgtatgctg +cactacacctc-ccccctgaggtattactaccaccaggcacctaccacacaacctcctatcttttgatccat +gatggtagtcgtgccgtcgtcacctacgagggtgacactagcgctggctacaaccatgatgtctctaccttg +cgcgcttggatccgcacgacaaagrttgttggtgaccatcccttggtgatagagcgggtccgtgcgattggc +tgccactttgtgctgttgcttactgcggcccctgagccatcycctatgccgtatgtcccttatccccgctcg +actgaggtgtttgtgcgctcaatatttggtccaggc---------ggttcgccgtcccttttcccgtcagct +t----------gttctacgaagtcta-ccttccatgctgtcccggttcacatctgggataggctcatgctct +ttggtgctacattggatgaccaggcgttttgctgctcgagacttatgacttacctgcgtggcataagctata +aagtcacggttggcactcttgttgccaatgaaggctggaatgcctctgaggatgctcttactgccgtgataa +ctgcagcataccttactatctgccaccaacgctacctccgcacccaggcaatttccaaaggcatgcgtcggc +tggagctcgagcacgctcagaagtttatcaccaggctttacagctggctgttygagaagtc---------tg +gccgtgattatatccccggccgccagctccagttttacgcgcagtgccgccgttggctctccgctggctttc +acctggaccctaggctgcttgttttygatgagtctgtgcactgc---cgttgtaggagcttcataaagaa-- +----tgtgactaggaaggtttgttgcttcatgaagtggcttggccagga------atgcacctgtttcttgg +----------------aacccgcggaggggctgataggcgaccaaggc--------catgataatgaagcct +atgaagggtctgagatcgaccctgctgagaccgctctccctgacatatcagggacttatgttgtccatgggc +ggttgttggcagatttgtacagagcactcaatattccacatgatattgcggctcgagcggcccgcctgtcag +ccaccgttgagctcgttacaggcccaggtcggcttgagtgccgtacgattcttggtaataaaaccttccgca +ctacggttgttgacggcgcccagttggaggccaatgggcc------------------------tgagcagt +acgctctctcatttgacgaagctcatcagtgtatgggggccgggccgcacagcctcgcctatgaactaaccc +ccagtggtctgcaagtcaaaatcacgtcg-------aatggtctagactgygtggcggtcttcccc---cct +gggagggccccragtgtagagcccgcagaggtcacggccttttgtagtgccttgtacagatataacaggacc +gtgcagcggcattcgcttgtgggcggactctggctatacccggagggactgttaggcccattccctcccttc +tcccccggccatcactgggagtctgcaaaccctttttgtggcgagagcactctttacactagaacatggtct +acatctggtttctctagtgacttttcaccacctgaggtggccgccggtggcccctctccccccagc------ +-tcatcccatgtgaccgccacccctgtagggggtat-----------------tcaagtcct---------- +---------gcccttaccc---------------------------------------------tctgcagc +cccaa------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------------agcctgctgaccggcccg-- +-ttgaggtgcctggg-------------------------------------ccctcagcccataagcctcc +ggggcaccc--------------------------------------gccagcccgtaaccgtcgtc----- +-------------------tcctttacacctacccggacggggccaagatttactcrggatccttgtttgaa +tctgactgcgactggttggtcaatgcatccaatcccggccaccgtccaggtggtggcctctgccatgctttt +taccagcgtttccccgagtctt------ttgacccagccaagttcgtcatgcgagacgg---gctcgcggct +tataccctttcaccccgtccgatcattcatgcagttgccccggattatagggttgaacataaccctaaaagg +ctggaggccgcttaccgcgagacatgctctcgccttggcaccgcagcttacccgttgcttggttcaggcatc +taccaagtcccagtcggccctagctttgatgcctgggagcggaaccatcgcccaggtgacgagctttatcta +actgaacctgctgttaca-------------------------------------------------tggtt +tgaggccaatagaccggtccgttcttccatgcccatgactaatgatccgcccttagcggccgaccccccatc +aggggctgaccgtccccctggggccgacggtcatccagctttgcctgccctgaccataacagatgacatagc +cc------------gaaccgctaacctcgcgttggagattg------------actcyaggacggaggtagg +ccgygcttgt---actggttgcacccttagccccggggttgttcactatcagtttactgcgggtgtccccgg +gtccggtaaatcgaggtcaatacaacaaggcgacgttgacgtagtggtagtccctacccgtgagctgcgcaa +cagttggcgccgccgcggttttgctgcattcacaccccattcggccgcccgtgtaaccggcggccggcgtgt +tgtgattgatgaggcaccgtccctcccaccacatttgttgttattgcacatgcagagggcctcgtcggtgca +ccttctcggtgaccccaaccaaatccccgcaattgatttcgagcacgctggccttgttcctgcgatccgccc +tgagttggcacccactagctggtggcatgtcacgcaccggtgccctgcggatgtctgtgagcttatacgtgg +tgcataccctaaaatccagaccaccagccgcgtgctgagatctctgttctggggtgag------cctcccat +tggccagaagctggttttcacacaagctgctaaggctgctaaccccggtgcaattamtgtccatgaggccca +aggggctacgtatacagagaccactattatagccacggctgatgccaggggcctcatccagtcctctagggc +acatgccattgttgcgctcactcggcacacagagaaatgtgtcattctggatgctccggggttacttcgtga +agttggcatatctgatgtgatagttaataacttc------------------------------tttttagc +aggcg--gtgagattggccatcaccgcccctctgtcataccccgtggcaaccccgacccgaatctcgcgac- +-----cctacaggcgtttcccccctcctgtcaaatcagtgcctatcaccagctggccgaggagcttggccat +cggccggcgccacttgctgctgttctacccccttgccccgagcttgagcagggtctactgtatatgccacaa +gaacttacagtatctgatagtgtcctggtttttgaattaactgatattgttcattgccgtatggctgctcct +agccagcggaaggctgtcttgtccacacttgttggtaggtacgggcgacggacgcggctatatgatgccacc +cattcggatgtacgtgagtcgcttacacggttcatccccaccatcggccccgttcaggctacaacatgtgaa +ctctatgagctggtcgaggcgatggtggagaaaggccaggatgggtcggctgtattagagcttgacctctgt +agccgggatgtgtcccgtataacatttttccagaaagactgtaataagtttacaaccggggagactatcgcc +cacggtaaagtgggtcaggggatatcggcctggagcaagactttctgtgccctatttggtccttggttccga +gccattgagaagcagatactggctctgttaccgcctaatatcttctatggtgacgcctacgaagattttgta +ttttcggcggctgtcactgrtgcggtgtcaagcatg---gtctttgagaatgatttctcagagtttgatagt +acacaaaacaatttctcatt------------------aagccttgagtgtgtgatcatggaagagtgtggt +atgccacagtggctaattaagctatatcatctagtacggtcggcctggatcttacaggccccgaaggagtct +ttgaaaggtttttggaagaagcactccggcgagcccggcacgctgctctggaacaccgtgtggaatatggcg +atcatagcacactgctatgaatttcgagacyttaaggtcgctgcgtttaagggggatgactcggttgtcctt +tgcagtgattaccgccaaagtcgccttgctgcggccctaatagcgggctgcgggctcaagctcaaggttgac +taccggcctatcgggctctatgccggcgttgtggttgcccccggtcttgggacgttgcccgatgtcgtccgg +ttcgccggccggctctcagagaagaattggggccccggccctgagcgtgctgagcagttgcgcttagctgtt +tgtgattttctaaggaggttgactaatgttgctcaggtctgtgttgatgtagtatcccgtg-------tcta +tggggttagccctgggcttgtacataacctgattggtatgttacagaccattgccgatggtaaggcccattt +tactgagactgtaaaacctgtgcttgatcttacaaattctattatacagaggttggaatgaataacatgtc- +t----------------tttgcaccgcccatggg------------atcgccatgcgccctggggctctttt +gctgttgttcctcgtgtttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccggctggcc------------gccgtcgtgggcg-gcgcggcggcggttc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatcttcat---- +--------------ccaaccaaccccttcgccgctgacgttgacacacatcccgggtctggagcccgtcccc +ggcagccaacccg---------------tcccctcggtacctcttggcgcgacctgtccca----------- +------gcgcccctctgccacctcacgccgtagatctacccca---------gctggggctgcgccgctgac +cgccgtttcgcctgcgcctgatacggccccggtcccggatgttgattctcgcggggcgatcctgcgacgcca +gtataacctctcaacctcgcccctgacatctactgttgcttcaggtactaatcttgttctatatgctgcacc +ccttaatcctctcctccctcttcaggacggcaccaatactcatatcatggcgactgaggcgtctaattatgc +tcagtatagggtcgtccgtgctacaatccgttatcgccccttggtacctaatgcggtcggtggttatgctat +ttctatctccttctggccccaaactaccactacccccacttcagttgacatgaattctatcacctctactga +cgttcggatcctcgtccaacccggcctggcgtctgagcttgtcataccgagtgaacgcctccactacsgtaa +tcagggctggcgctcggtggagacctccggtgtggccgaggaggaggctacctccggacttgttatgctttg +tattcatggttcccccgtcaattcttataccaacaccccctacacaggggcactcgggcttcttgattttgc +gctcgagattgagttccggaatttgaccccaggtaatactaacacacgtgtctcccgttatacyagcacagc +ccgccaccgtcttcgccgtggtgctgatggcactgccgagcttacaacaacggcagcaacaaggtttatgaa +agatctccacttta---cagggatgaac---ggggtcggtgaaattggccgcggtatagccctgacactgtt +caacyttgctgayacrcttctcggcggtttgccgacagaattgatttcgtcggctgggggtcaggtgttcta +ctcccgtcccgtcgtctcagccaatggcgagccgactgttaagctttatacatcagtcgagaatgcgcagca +ggataagggaatcgcgatacctcatgatattgatcttggtgattcccgtgttgttattcaggactatgacaa +ccaacatgagcaagatcggcctactccatctccggccccctcccgccctttctctgttttgcgcgctaatga +tgtgttatggctctc-----------------------------gcttactgctgctgaatatgac------ +cagactgactttggctctyctactaaccctttgtatgtttccgatactgttactttcgt---taatgttgcc +acaggtgcccaggccgtcgctagatctctcgattggtctaaagtcactttagatgggcaaccgcttaccacc +at-----tcaacaacactctagaactttctatatcc-ttcctctccgtggcaagctttccttttgggaagct +ggcaccactaaa--gctggctacccttacaattataataccaccgctagcgatcagattttaattgagaatg +caaccggccac------cgtgttgcgat-ttcgacttacactacaagtctggg--------------tgccg +gccctgtttcagtctc-cgctgttggtgttcttgccccgcactctgtcctagctgttcttgaggatactatc +gatt---------accctgctcgtg----ctcatacttttgacgatttctgccctgaatgccgggctc---t +cggcttacagggttgtgcgtttcagtc--------tactgttgctgagcttcagcgtct------------- +--------taagatgaaggtaggcaaaacccgggagtcttaattaa-tt----tt-gctt----------gt +gccc-cctt-------ct-tacg-ct-tt---tgt-ct--------------------tatt-t-------c +ttatttct----gcg----------------tttcgcgctccctg---------------------gaaaaa +aaaaaa------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MG674164.1/17130/1-7130 |Hepeviridae isolate HEV/13RS9855, complete genome +------------------------------------------------------------------------ +----atggaggcccatcagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +cgcggccaactccgccttggcgaatgctgtggtggttcggccgttcttatctcgtgtgcaaacagagattct +tatcaatttgatgcaaccccggcaactggttttccgtcctgaggtactytggaatcatcctatccaacgtgt +catacayaatgaattggagcagta---ctgccgggccc-gggctggccgttgcctggaaattggggcccacc +caaggtcaattaatgataaccctaatgttctgcacaggtgtttcttgcggccggttgggagggatgttcagc +gttggtactctgcccccacccgcggccctgcggctaactgccgccgatccgcgttacgtggtcttccccctg +ctgaccgtacttactgttttgatgggttttcccgctgcgctttcgctgcggagactggtgtagccctttact +ctttgcatgacctctggccagctgatgttgcagaggccatggcccgacatggaatgacacgcttgtacgccg +cgctgcacctc-ccccctgaggtactgttaccacctggtacttatcacaccacctcataccttctgatccat +gacggtaatcgtgctgttgtgacttatgagggtgataccagcgcaggctacaaccatgatgtctctatactc +cgtgcgtggattcgcacgaccaagattgttggtgaccatccgttagtgatagaacgtgtgcgggccattggc +tgtcactttgtattattgcttactgcggctcctgagccgtctcccatgccatatgttccataccctcggtcg +acagaggtgtatgttcgttccatatttggtcctggc---------ggctccccatccctgtttccatcggct +t----------gctccaccaaatcca-catttcatgccgtcccggtccatatctgggaccggctcatgctct +tcggcgctaccttggatgaccaggcgttttgctgctcgcggcttatgacctatctccgtgggatcagctaca +aggttaccgttggcgcccttgtcgccaatgagggttggaatgcctcggaggacgcactcactgctgttatta +ctgcagcgtatttgactatttgccatcagcgttacctccgcacccaagcgatatctaagggcatgcgccggt +tggaggttgagcatgctcagaaattcattacaagactctatagctggctcttcgagaagtc---------tg +gccgtgactatatccctggtcgccagctccagttttatgcgcagtgtcgccgttggctatcggcaggcttcc +atcttgaccccagggtgctcgtctttgatgagtctgtgccctgt---cgctgtaggacgtttcttaagaa-- +----ggtagctggaaaattttgctgcttcatgaagtggctcgggcagga------gtgcacctgctttttag +----------------aaccagtggagggcctggtcggcgaccaaggc--------cacgacaatgaagctt +atgagggctcggaggttgatcaagccgagcctgcccaccttgacgtctcggggacctacgccgttcacgggc +gtcagcttgaggccctgtatagggcgcttaacgtcccacaggatatcgccgctcgggcgtcctgcctgacag +ccaccgtcgagcttgttgcgagcccagaccgcttagagtgccgtaccatactagggaataagacttttagga +ctacggtagtcgatggcgcccatcttgaggccaacggccc------------------------tgagcagt +atgtcctttcatttgatgcctcccgccagtccatgggggctgggccgcatagtctcacttacgagttgaccc +ccgctggcctgcaggtgaacatctcgtct-------aacggcctggactgtaccgcgacgttcccc---ccg +ggcggcgcccctagtgctgcaccgggtgaggtggcggccttttgcagcgccctttataggtacaaccggttc +acccagcgacactcgctgacaggtggcctatggctgcatcctgaggggctgctgggtatctttccccccttc +tctcctgggcatctctgggagtctgccaatcccttttgtggggaggggactttgtatactcggacttggtct +acatctggtttttctagtgatttttctccgcctgaagcagctgcctttgtgccagctgccacccc----ggg +gctgcccc---gccccacgccccccgctagtgacgt-----------------ctgggtact---------- +---------gccgccgccc----tctgaggagt--------------ctcaggttgatgtggtgcctgatcc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cacctgagcctgtccgaccgcccagc +ccagttaggcctaag-------------------------------------gtccccgtgcgtaagccgtc +gacaccacc--------------------------------------acctcctcgtacccgccgcc----- +-------------------ttctttacacctacccagacggcgccaaggtatacgcggggtcactgtttgag +tcagattgtgattggctagttaacgcatcaaatcctggtcaccgccccgggggcgggctttgccacgccttc +taccaacgataccctgagtcgt------tttattcgactgaattcgttatgcgtgatgg---cctcgctgcg +tacactctgaccccacgccctattatccatgcagtggctcctgattatagggtcgagcagaatccaaagagg +cttgaggcggcgtatcgagagacctgctctcgtcgtggcaccgctgcctacccgctattgggctcgggcata +taccaggttccagttggcctcagctttgatgcttgggagcgtaaccaccgccctggtgatgagctctatcta +accgagcccgcggccgcc-------------------------------------------------tggtt +tgaggctaataagccgacaca--------------------------------------------------- +------------------------------------------accagctcttacaatcactgaggatgcagc +cc------------gtacggccaacttggcactagagattg------------atgctgccaccgaggtcgg +ccgtgcctgt---gccggctgcacagtcaaccccggagttgtacactaccagttcaccgctggtgtcccggg +ctcggggaagtcacggtccatacagcagggggatgttgatgtggtggttgtccctacccgtgagctccgtaa +tagctggcgccgccggggttttgcggctttcacaccccacacggcggctcgcgtcaccttgggtcgtcgcat +tgtcattgacgaagctccttccctaccaccacatctgctgttgttacatatgcagcgagcctcatcagtcca +cctccttggcgatccaaaccagatccctgccatagattttgaacatgccggcttggtccccgcaatacgccc +tgagctcgcgcccactagttggtggcatgttacacatcgttgtcctgctgacgtgtgtgaactcatacgcgg +ggcttacccaaagatccaaaccacgagccgtgtattgcggtctctattttggaatgaa------cctgccac +tggtcaaaaactggttttcacgcaagccgctaaagctgctaaccctggtgcaatcacagttcatgaggctca +gggtgccacctttacggagaccaccatcatagctacggctgatgccaggggccttatccaatcgtccagggc +ccatgctatagtagcacttactcgtcacacagagaagtgtgttatactggatgcccccggcttgttgcgtga +agtcggtatatctgatgtaattgtcaacaatttc------------------------------tttctcgc +cggtg--gtgaagtgggccaccaccgcccctccgtgatacctcgtggcaaccccgacaggaatcttgctac- +-----cctgcaagcgtttccaccttcttgccaaattagcgcttaccatcaactggctgaggaattaggccac +cggcctgcccctgttgccgcggttttgcccccttgccctgagcttgagcagggtttgttgtacatgccgcag +gagcttacggtgtctgacagtgtgttggtcttcgaactcacggacatagttcactgccgcatggccgcccct +agccagcggaaggccgtcctatcgacgcttgtggggaggtacggtcgtaggacgaagttgtatgaggccgcc +cattctgatgtccgcgagtctctcgccaggttcattcccaccatcggacccgttcaagccaccacatgtgaa +ctgtacgagctggtcgaggctatggtcgaaaagggtcaggacggttcggccgtgctggagctcgatctctgc +aaccgcgacgtctcgcgcattacgtttttccaaaaagactgcaataaattcactaccggtgagaccattgcc +cacggtaaagtcggccagggtatttcagcatggagtaagaccttctgtgccctgttcggcccgtggttccgt +gctatcgagaaggagatattggctctgctccctcccaacatcttttacggcgacgcctatgaagagtctgtg +ttcgccgccgctgtgtctggggcggggtcatgcatg---gtattcgagaatgacttctcagagtttgatagc +actcagaacaatttctctct------------------tgggcttgaatgtgtgatcatggaggaatgtggc +atgccccagtggctaatccggctgtaccatctggttcgatcggcctgggtgttacaggcgccgaaggagtct +ctcaaaggcttttggaagaagcattctggcgagcccggtaccctcctttggaacaccgtctggaatatggcg +attatagcacactgctatgagttccgcgattttagggtcgccgctttcaagggtgatgattcagtggttctt +tgtagtgattaccgccagagccgcaatgcagcagctttgattgctggctgcgggcttaaactgaaggttgac +taccgccctattgggttgtacgctggtgtggtggtggctcccggcctggggacgctgcctgatgtggtgcgc +tttgctggccggctgtctgagaagaactggggcccaggcccggagcgggctgagcagttgcgtcttgcagtt +tgtgacttccttcgtgggttgacgaatgtcgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggttggtacataaccttattggcatgctacagaccattgctgatggtaaagcccattt +cacagagactgttaaacctgtgcttgacctaacaaactccattatacagcgggtggaatgaataacatgtc- +t----------------tgtgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gttgttgttcctcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgactggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcatttcacaacccggggctggagctcgccctc +gacaaccgccccg---------------ccccctcggctccacttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctgcccca---------gctggggctgcgccgctgac +cgctgtgtcgccggcccccgacacggcccctgtgcccgatgtcgattctcgcggtgctatactgcggcggca +gtacaatctatctacatccccactgacttcatctgtcgcttcgggcactaacttggttctttacgccgcccc +gttaaaccctcttctgcccctccaggatggcaccaacacacatattatggctactgaggcgtccaactatgc +ccagtatcgggtcgttcgagctacgatccgttatcgcccgttggtgccaaacgccgttggtggttatgcaat +ttcaatttcattctggcctcaaactactactacccctacatctgtggatatgaattctatcacctctactga +tgttaggattttggtccagcctggtatcgcctctgagttggtcattcctagcgagcgcctccactatcgtaa +ccagggctggcgctctgttgaaacatctggkgtggccgaagaagaggctacctctggtttggttatgctttg +tattcatggctcccctgttaattcttataccaacaccccctatactggggctttggggcttcttgattttgc +attagaacttgaatttaggaacctgacacccgggaataccaacacccgtgtgtctcgctatacgagcacagc +ccgccaccggctgcgtcgcggtgctgatggtactgccgagctcaccaccacagccgccacgcgttttatgaa +ggacctccatttca---ccggtacgaac---ggggttggtgaagtgggccgcggtattgctctgacactgtt +taatcttgctgatacgcttctcggaggtttgccgacagaattgatttcgtcggccgggggtcaactatttta +ctcccgccccgtcgtctcagccaatggcgagccggctgttaagctttatacatctgttgagaatgcgcagca +ggacaaaggaattgccatcccacatgacatagacctgggtgattcccgtgtggttattcaggactatgataa +tcaacatgagcaggaccgtcctaccccttcgcccgccccgtctcgtcctttttcggtccttcgtgcgaatga +tgttctgtggctctc-----------------------------tctaactgccgctgagtatgac------ +cagactacgtatggatcatccaccaatccaatgtatgtttcagatactgtcacatttgt---taatgtggcc +acgggagctcaggctgttgctcgctctcttgactggtccaaggtcaccctagatggtcgccctcttaccacc +at-----ccagcagtactccaaaacgttttatgttc-ttccgcttcgcggaaagttatccttttgggaggct +ggcacgactaag--gctggctacccttataactacaacacaactgctagtgatcaaattttgatcgaaaatg +cagccggacat------cgtgttgctat-ttccacttacactactagtctagg--------------tgctg +ggcctgtgtcagtttc-tgcggttggcgtgctagccccacattcggctctcgctatcctcgaagatactgta +gact---------acccggcccgtg----ctcatacctttgatgatttttgccctgagtgccgtactc---t +tggcctgcagggttgtgcttttcaatc--------cactattgctgaactccagcgtct------------- +--------caaaatgaaggtaggtaaaacccgggagtcttaat----------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF567575.1/17134/1-7134 |Hepeviridae isolate BJ01 nonstructural protein gene, complete cds; capsid protein gene, partial cds; and phosphoprotein gene, complete cds +------------------------------------------------------------------------ +----atggaggcccatcagttcataaaggctcctggcgtcactactgctattgag---caggcagctctagc +agcggccaactctgccttggcgaatgctgtggtggttcggccctttttatcccgccaacagacagagatatt +aattagtttgatgcagccccggcagcttgtcttccggcctgaagttttgtggaaccatcctatacaacgcgt +gatccacaatgagctcgagcaata---ttgtcgagctc-gcgccggtcgctgccttgaagtgggtgctcacc +cacgttcaatcaatgacaaccctaatgtcctgcatcgttgttttctcaaaccggttggtcgtgatgttcagc +ggtggtacactgcccccacccgtggtcctgcggcaaattgtcgccggaccgctcttcgcaggctcccacctg +ttgaccgcacatactgctttgacggtttctcttgctgcacctttgccgccgagacaggtattgccctctatt +cactgcatgacctatggcctgctgatgtcgccgaggcgatggctcgccatggtatgactcggctttacgcag +ccctccatctt-ccccctgaagtgctattaccccctggcacatatcacactacctcatatctgttaactcat +gatggggaccgtgcagtgattacatatgagggggattctagtgcaggatacaatcatgatgtgtccattttg +cgggcatggattcgtaccaccaaggtcactggtgatcatccgctggtaatcgagcgggtccgagcggttggg +tgccattttgtgctcctccttacagccgctcccgaaccatcgccgatgccctatgttccatacccgcgttcg +accgaagtctatgttcggtccatttttggccctggt---------ggctcgccatccctctttccatctgcc +t----------gctctactaagtcaa-catttcatgccgtccctgtgcatatatgggataggcttatgcttt +ttggtgcgaccctcgacgaccaagctttctgctgttccaggctcatgacgtatctccgtggcattagttata +aggtcacggtaggcgccctcgttgccaacgagggctggaatgcttctgaggacgcgctgactgccgtaatca +ctgcagcttatcttactatctgccatcagaggtatctccgtacgcaggccatctcgaaagggatgaaaagat +tggagctcgagcacgcgcagaaatttataacacgcctttacagttggctatttgaaaagtc---------tg +ggcgtgactacatccccggccgccaactgcagttttatgctcagtgccgccggtggttgtctgctggttttc +atcttgacccccgtgtgctcgtttttgatgaagctgtcccctgc---cgctgtcggagttttttgcgtaa-- +----agccgcccacaagttttgctgctttatgcggtggttaggtcaaga------ctgcacctgttttcttc +----------------agcctattgaagggagggttggtgtacaaggt--------tatgataatgaagcgt +ttgaggggtcggatgttgaccctgctgaggaagctactgtgagcatctccgggtcatatattgtcactggcc +gccagctacagcctctgtaccaagcgcttggcataccatctgaccttgccgcccgtgccagtcggctcgtcg +ctaccgttgaagtttcagacgctgagggccgtcttacttgcaagaccatcttgggcaataaaaccttttcaa +cggtatttactgatggcgcccagctggaggccaacgggcc------------------------agaacagt +atgttctatcattcgattcgaccaaacaaactatggctgctggcccgcacagtcttagctacactttaacat +ctgaaggccttgaagtgcgtattacttcc-------gctgggcttgattgcaaggctgtctttccg---cct +ggtgtcgcagccccctctgcttctggggaggtgtctgctttttgttcagctctctacgggttcaatcgctgt +gtccagcggcattccctcattggaggtctgtggtattatcctgaaagtttaattggtttgttcccgccgttt +tcccccggtcatagctgggagtccaccaatccattttgcggtgaaagcaccctttacactcgaacctggtcc +gtgttgggcttctccagctgtttctctcctctcgagtctcatgccccgaagctgccaccttcagat---gac +attggcat----------gtctgtagttactgatac-cccgcca---------ctggtttct-----cctgt +gcagactcagccccaaact----cccggccctg---ttg--------------------cgcccccaccaga +ttcgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttgatggtggtgctggccctggcctg +attagcgtccctgcg---------------gtg-------------------cccccggtgcccgcgcagcc +cgtaactca--------------------------------------gc---ccgggccccgtcgacg---- +-----------------actgctccatacttaccccgatggctcaaaagtgtatgccggatccctttttgag +tctgagtgcacatggctggttaatgcctctaacccgggccaccgccccggtggtggcctctgccatgcattt +taccagcggtttccagagtcct------ttgaccccgctgagtttatcatgtctgacgg---gtttgcagcc +tacaccttgacacctcggcccataattcatgctgtcgcccctgactaccgggctgaacataaccctaagcga +cttgaggccgcctaccgggagacgtgttctcgccgtgggacagcagcttaccccttgctcggcgctggtata +tacaaggtccctgttgggttgagctttgatgcttgggaacgtaaccaccgacctggagacgagctgtacttg +actgagccagccatagcc-------------------------------------------------tggtt +tgaggctaaccgacctaccct--------------------------------------------------- +------------------------------------------tcctgctctaactatttctgaggacacggc +ac------------gcacggcgaacctagcactggagctgg------------atgcagccactgaggttgg +ccgggcgtgc---gctggctgtcgtgttgagcccggtgtagttcattatcagtttacagctggtgttcctgg +atccggtaaatcccggtcaatccagcaaggggatgtagacgtgatagtggtaccaacccgtgagttacgtaa +ttcatggcgccgccgcgggtttgcagcctacacgccccacaccgcagctcgtgtgactcgtggccgtagagt +tgtcattgacgaggccccctcgcttccaccacatttgctcctgttgcatatgcagcgggcctcgtcggttca +ccttcttggtgaccctaaccaaatccctgccattgattttgagcatgccggcctcgttccggcaatccggcc +tgagttggttccaactaagtggtggcaccttacccataggtgccctgcagatgtctgcgagctgattcgtgg +tgcatacccaaagatccaaactgcgagccgtgtcctccgttctctgttttggggggag------cctccggt +gggccagaagttggtatttacccaagcggccaaggctgctaaccctggtgcgattacagtgcatgaggccca +gggcgcaacatttaccgagaccacaattattgccacagcggacgctcgtgggctgattcagtcctccagggc +ccatgctattgtggccttgacccgtcacacggagaagtgcgtggtagtcgatgccccggggcttcttcgtga +ggtgggtatttctgatgctattgtcaacaatttc------------------------------ttcctctc +tggcg--gtgagattggccagcaccgtccgtcagttgtaccccgaggcactattagcagcaatgttgacac- +-----gcttgatgcattccccccttcttgtcagtttagcgcgtaccatcaattggccgaagagcttggccac +cggcccgcgccgattgctgccgtcttgcccccctgcccagagctcgaacagggcttactttatatgcctcag +gagctaaccacatcggacagtgttctcatctttgaactaacggacattgtgcactgccgtatggcggcaccc +agtcagcgtaaggcggtcctgtcgactcttgtcggcaggtacggccgccgcacgaagctgtacgaggctgcc +catacagatgtccgcgggtccctgaatcactttattcctgagcttggccctatcaatgtcaccacctgcgag +ctctttgagcttgtggaggctatggtggagaaaggccaggatggctctgcagttctggagctcgacctatgt +aaccgtgatgtgtcccggataaccttcttccagaatgattgtaataaatttacaacaggtgagacgatagcg +cacggtaaggtcgggcaaggtatatctgcgtggagtaaaactttctgcgccttatttggcccgtggttccgt +gctattgaaaaggagattttggcggcacttgcgcctaacatcttctatggtgatgcctatgaggatacagtt +ttggccgctgctgttgcaggcgctcctggttgtaag---gtttttgagaatgacttttctgagtttgatagt +agtcaaaataatttctcact------------------tgggcttgagtgtataattatggaagagtgtggc +atgccgcaatggatggtgcgactttaccatcttgttcgctctgcttgggttttgcaggccccaaaagagtcc +ttgcgcggcttctggaagaagcattctggcgagcctggcaccctgctgtggaatactgtttggaatatggca +gttatagcgcactgctatgagttccgtgaccttaaagttgcggcatttaagggggatgactctgttgtgctc +tgcagcgattatcggcagagccgcaatgcggctgctctaatcgctgggtgtgggctaaagcttaagatggac +tttaggcctattgggctgtatgctggtgttgtagttgctccggggctcgggacccttcctgatgtcgttagg +tttgccgggcggctctcagagaagaactgggggccgggcccggagagggcggagcagctccggctggccgtt +tgtgactttttgcgaaagttaacgaatgtggctcaggtctgtgtggatgttgtttcgcagg-------tcta +tggtgttagccctggtttggtacataacctgataggaatgcttcaaactattgcggatggcaaagcgcattt +cactgagacgaccaaacctgttcttgatcttactagttccataatacatcgggtggaatgaataacatgttc +t----------------tttgctctttgcatggcg---------atgccaccatgcgctctcgggctcttct +gtttttgctcctcctgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gtcgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgcatctgacattccagcagccgccggggctggtgctcgccctc +gacaaccggcccg---------------cccactcggctccgcttggcgtgaccattccca----------- +------gcgccccgccactcccgcccgtcgtcgacctacccca---------gctggggcttcgccgctgac +ggctgtggctccggcccctgatactgctccggtccctgatgttgactcgcgcggtgctatattgcgccgtca +gtataacttgtccacatccccacttacatctaccattgccaccgggaccaatcttgtgctatacgctgcccc +gcttagccctctactcccacttcaggatggcaccaacactcatattatggctactgaggcttcaaactatgc +tcagtatcgtgttgtccgcgccaccattcggtatcgtcccctggtgccgaatgctgttggtgggtatgctat +ctctatttctttttggccccaaacaactaccaccccgacgtccgtggatatgaattccatcacttccaccga +tgtccgtattcttgttcaacccggtatagcttccgagttagtgattcccagtgagcgcctgcattatcgaaa +tcagggttggcgctcagttgagacctctggcgttgctgaggaggaggctacttccggtcttgttatgctctg +tattcatgggtcaccagtgaactcctatactaatacaccttatactggcgctctcggcctgctcgattttgc +gcttgagcttgagtttcgtaacttgacacctggtaatacaaacacgcgcgtttctcgttattcgagcagtgc +gcgccacaaacttcgccgaggggccgacggcactgcagagctaactactactgctgccacacggttcatgaa +ggatcttcattttc---cagggactaat---ggtgttggggaggttgcccctggaatagcgcttactttgtt +taaccttgctgacccaattcttggcgggcttccgacagaattgatttcgtcggctggcggccaactgtttta +ttcccgccccgtcgtttcagccaatggcgagccgacagtgaaactttacacctcagtcgagaatgctcagca +ggacaaggggatcgctatcccacatgatattgatcttggtgagtcccgagttgttattcaggattatgacaa +tcaacatgagcaagaccgccctaccccctctcctgcaccttctcgccccttttctgtgcttcgtgctaatga +tgtactttggctttc-----------------------------actcacggccgctgagtatgat------ +caggctacctatggctcttctactaaccctatgtatgtttctgacactgtgacgttcgt---caatgtggct +accggcgcccagggggtttcgcgctccctggactggtcaaaggtcactcttgatgggcgcccactaactact +at-----ccagcagcattctaagactttctatgttc-tgcctcttcgtggtaagctctccttttgggaggca +ggtactactaaa--gctggttatccttacaattatgacactactgcgagtgatcagatcctgattgagaatg +cagctggtcac------cgggtttgtat-ttctacttatactactaatttagg--------------ctctg +ggcctgtttctatttc-tgctgtcggcgtcctcgcacctcattctgcattggctgttctagaggatactgtt +gact---------accctgctcgtg----ctcacacttttgatgacttctgccctgaatgccgtgcgc---t +cggtcttcagggttgtgcttttcagtc--------aactgttgctgaattgcagcgcct------------- +--------taaaatgaaggtgggtaaatcgcggg-------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>KY232312.1/17235/1-7235 |Hepeviridae isolate THhuS451, complete genome +--------------------------------------------------------------tgtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatcccgcattcaaactgagattct +cattaatttgatgcaaccccggcagctcgttttccggcctgaagtcctttggaaccatccgatccagcgagt +catacataatgagttggagcaata---ctgtcgagctc-gtgctggccgttgtcttgaggtgggcgcccacc +caagatccattaatgacaatcccaatgttctgcaccggtgctttctccgcccggttggaagagacgtccagc +gttggtattctgctcccacccgtggccccgcggccaattgccgccgctctgcgctacgcggcttgccccctg +tagaccgcacatactgcttcgatgggttctcccgctgcgcctttgccgctgagaccgggattgctttatatt +cactacatgacctttggccctcggacgtcgcggaggctatggcccgccacgggatgacgcgcctgtatgctg +ccctccatctg-ccccctgaggtcctgttaccacctggcacttaccatacgacctcctatcttttgattcac +gacggcaatcgtgccgtcgtgacttatgagggagatactagtgcaggctataaccatgatgtgtctatactt +cgtgcatggatccgcaccactaaaatagttggtgatcacccgcttgtgatagagagggttcgcgccatcggc +tgccattttgtgttactccttactgcggcccctgagccatccccaatgccctatgttccttatcctcgctca +acagaggtgtatgttagatccatatttggtcctggc---------gggtcaccttctctattcccatcagcc +t----------gctctaccaaatcta-cattccatgctgtaccggttcatatttgggaccggctcatgcttt +ttggcgccaccttagacgatcaggctttttgctgctcgcggcttatgacttatctccgcgggattagctata +aagtgaccgttggcgcactcgtcgccaacgagggttggaatgcttcggaggatgcgcttaccgctgtgatta +ctgcagcatatttgaccatctgccatcagcgctacctacgaacacaggccatttccaaaggcatgcgccgtc +tagaggttgagcacgcccaaaagttcatcacaaggttatatagctggctgtttgaaaaatc---------ag +gccgtgattacattcccggccgccagctccagttttatgcacagtgccgccgttggctctcggccggcttcc +atctggaccctagagttcttgtttttgacgaggcggtcccttgc---cgctgccgtagcttcttaaagaa-- +----ggctgctggaaaattctgctgttttatgaaatggttagggcagga------gtgcacctgttttctgg +----------------agccagcggaaggcctggttggtgactgtggc--------catgataatgaggcct +atgaagggtccgaggtggatcccgctgagcccgcccaccttgatgtttctgggacctatgcggtccacggcc +gtcagcttgaggctctatatagagcgctcaatattcctgatgacattgcggctcgtgcgtcacgtctgacag +ctactgtagaactcgccgccagcccgggccggctcgagtgccgtactgtgctagggaataagaccttccgta +catcaataactgatggtgctcacctcgaagccaacggccc------------------------cgagcagt +acgtcttgacgtttgatgactcccgccaggcaatgggtgctgggccgcatagcctaacgtatgaacttgttc +ctgccggtctgcaggttaaaatatcatct-------aatggcttggattgtaccgctatattcccc---cct +ggtggggcgctaagcgctgcgccaggtgaagtggcggctttctgtagcgccttatacaggtacaataggttc +acccagcgccattcattgaccggtgggctatggctgcaccctgaggggctccttggcctgttcccccctttc +tccccggggcatctctgggagtctgcaaaccccttttgcggtgagagtacactttacacacgaacctggtct +acttctggtttttctagcaacttttccccacccgaagcggcttatgtcgccccagcccctgacgt----ggg +actaccctcgggtaccccctcatctgctggcgatgt-----------------atgggtatt---------- +---------cccgccgccc----tccgaggggt--------------cggtagttgtcccaccacccgagac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtaagccagctaatccacctagt +cttactacacctagg-------------------------------------cctcctgcccgtaagccgcc +tacaccacc--------------------------------------accgacccgcactcgccggc----- +-------------------tcctttacacgtatcccgatggggccaaggtgtatgcgggctctttgtttgag +tcggactgtgattggctggttaatgcatctaaccctggccaccgcccaggcggtggtctctgccatgcattt +taccagcgttttcccgagtctt------tccacccgactgattttgttatgcgtgaggg---tctcgccgca +tatactttgagcccgcgtccgatcattcatgctgtggcccctgactacagggttgagcagaatcctaagagg +ctggaggcggcataccgtgagacttgctcccgtctcggcacggccgcttacccgttactcgggtcggggatt +taccaggttcctgtaggcttaagcttcgatgcctgggagcgtaaccaccgcccgggcgatgaactttacctt +actgagccagctgccgct-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccggccctaacaattactgaggacaccgc +cc------------gcacggctaaccttgcacttgagattg------------attctgccactgaggtggg +tcgcgcttgt---gccggctgtactattaaccctgggattgtccactaccagttcaccgccggggttcccgg +ctccggaaagtctaggtctatacagcagggggatgttgatgttgtggttgtgccgactcgcgagctccgcaa +tagttggcgacgccgcggctttgctgcttttacaccccacacagcagctcgtgtcactgccggccggcgtgt +ggtgatagatgaggcgccttcgctaccaccgcacttgctgttgctccatatgcagcgagcctcatcggtcca +tctcctcggtgaccccaaccagattccagctattgattttgagcacgccggtttggttccagcgattcgtcc +tgagcttgcccctactagttggtggcacgtcacccatcgctgccccgccgacgtttgtgagctcatacgcgg +ggcttacccaaagatccagacgaccagccgcgtgttgcgatccttattctggaacgag------cctgcggt +gggccaaaagctggtctttacgcaggcagccaaggcggccaaccccggtgcaatcaccgttcacgaagccca +gggcgccacatttacggagactaccatcatagccacggccgatgccaggggtctcattcaatcttctcgtgc +gcatgctatcgttgcacttactcgccatacagagaaatgcatcattcttgatgcccctggcctgttgcgtga +ggtcggcatttctgatataattgttaataacttc------------------------------ttcctggc +tggtg--gtgaagtgggccatcatcgcccctccaccataccccgcggcgacccagaccggaacttagacac- +-----cctacaagcgttccctccgtcctgtcaaattagtgcttaccaccaactggctgaggagttgggccac +cggccggccccagtagccgccgtcctgcccccctgtcctgagcttgagcaggggctactctacatgccgcag +gagcttacggtgtccgatagcgtcctaacttttgaactcacggacatagtccattgccgtatggctgccccc +agtcaacgtaaggcggtcctttcgacgctcgtcggcaggtatggccgccgaacgaagctgtatgaagcggcc +cattctgatgttcgcgagtctttagggaggtttatccctactatcggaccggtccaggctaccacgtgtgag +ctacatgagctggttgaagctatggttgagaagggccaggacggttctgctgtactcgagcttgacctctgt +agccgtgatgtctcgcgtatcacattcttccagaaagattgtaataaattcacaacaggtgagaccatcacc +cacggcaaggtgggtcagggcatatcggcttggagtaagactttctgtgctctattcggtccatggttccgt +gccatcgagaaggagattctagctttgctcccgcccaacgttttttatggcgatgcctatgaggagtcagtg +ttttctgcagccatctctggggctggctccagtatg---gtttttgagaacgacttttctgagtttgacagt +acccaaaataacttttccct------------------tggccttgagtgtgttatcatggaggagtgtggc +atgccccagtggcttatccggctgtatcatttagttagatcagcctggaccctgcaagccccgaaagagtct +ttgaaaggtttttggaagaagcattctggcgaacccggcactcttctttggaacaccgtctggaacatggca +atcattgcacactgctatgaattccgtgacttgagagtggcagcgtttaaaggggatgactcagtggttctc +tgtagtgactaccgtcagagccgcaatgcagccaccctgatagccggttgtgggttgaaattgaaggttgat +taccggcctataggtttgtatgccggcgttgtcgtggccccgggcctcggtgcacttcccgatgttgtccgg +tttgccggccgactatctgagaagaactggggcccgggccctgagcgcgctgaacagctgcgccttgcggtc +tgtgattttctccgagggctgacgaatgttgcgcaggtttgtgttgatgttgtatctcgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacaaactattgctgatggaaaggcccattt +tactgagactgtcaaacctgtactggatcttacaaattctattatacagaggttagaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gctgctgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gtgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccttttgcctccgacgtcgtatcacaatccggggctggagctcgccctc +gacagcaggcccg---------------ccccctcggctcctcttggtgtgaccagtccca----------- +------gcgcccccccgctaccccccgtcgtcgatctgcccca---------actggggctgcgccgctaac +tgctgtttcaccagcgcctgatacggccccagttccggatgttgattctcgtggcgctatcttgcgccgcca +gtataatttgtccacttctcctttaacttcatctgttgcctctggaactaatcttgtcttgtatgccgcccc +gcttaatcctctcctacccctccaagacggcaccaacactcatattatggctactgaggcgtctaattacgc +tcagtatcgggttgttcgggctacaatccgctaccgtcccctggtcccgaatgccgtcggtggttatgcaat +ttccatttctttctggcctcagactacaaccacgcccacctctgtcgatatgaattctatcacctccactga +tgttaggattttagtccagcctggcatagcctctgagctggtcatcccgagcgagcgcctccactatcgtaa +tcaaggctggcgctcagttgagacatcgggtgtggccgaggaggaggcaacatcaggcctggttatgctttg +cattcatggttcccctgtcaattcctacaccaacacgccctataccggggcattgggactcctcgactttgc +actcgagcttgagtttagaaatctgacccccgggaacaccaacacccgtgtgtcccgttacaccagcacagc +tcgacaccgtttgcgtcgtggcgccgatgggacagctgagcttacgaccactgcagccacacgttttatgaa +ggacttgcatttca---ccgggacaaat---ggcgttggtgaggtaggccgcggcatagccctaacactatt +taatcttgctgatacacttctcggcgggctgccgacagaattgatttcgtcggctggaggtcaactgtttta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagctatacacctctgtcgagaatgcacagca +ggacaagggtattgctataccgcacgatatagacctaggggattcccgtgtggttatacaagattatgacaa +ccaacatgaacaggaccggcctaccccgtcgccggctccgtcccgccccttctcagtccttcgagccaatga +tgttctgtggctctc-----------------------------cctaactgcggctgaatatgac------ +cagaccacttacggttcgtcgactaaccctatgtatgtttcagacactgtcacatttgt---taatgtggcg +acaggtgcccaggctgtcgctcgttcccttgattggtctaaggtcactttggatggtcggccgctcaccacc +at-----ccagcagtattccaagacattctatgttc-taccgcttcgtggcaagctttccttttgggaggct +ggtacgactaag--gccggttatccttacaattataataccactgctagtgaccagattttgattgagaatg +cagccggtcat------cgtgttgctat-atctacatataccactagccttgg--------------tgccg +gtcctgtgtcagtttc-tgcggtcggtgttcttgcgcctcattctgctttagctgtgcttgaagacactatt +gact---------atcctgcccgcg----cccacacattcgatgatttctgccctgagtgccgtaatc---t +cggcctgcagggctgtgctttccagtc--------tactattgctgagcttcagcgcct------------- +--------taaaatgaaggtaggtaagacccgggagttttaattaa-tt----t---ccc-ttt------gt +gccc-cct--------tc-taaa-ct-tt----gc-tc-tgt----------------tatt-t-------c +ttttttct----gcg----------------tttcgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>MF346773.1/17244/1-7244 |Hepeviridae isolate CH_17LA00702, complete genome +----------------------------gcagacca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaactctgccctggcgaatgctgtggtggtccggccgtttttatcccgtgcacaaactgagattct +cattaatttgatgcaaccccggcagctggttttccgtcctgaggtactatggaatcaccccatccaacgtgt +catacataatgaactggagcagta---ctgccgggccc-gggctggccgttgcttggaagttggagcccatc +caaggtcgatcaatgacaaccccaacgtcctgcaccggtgctttctgcggccggttgggagggatgttcagc +gctggtactctgctcccacccgtggccctgcggccaactgccgccggtccgcattacgtggccttccccctg +tcgaccgtacctactgttttgatgggttctcccgttgtgctttcgccgcggagactggtgtggccctttact +ccttgcatgacctctggccggccgatgttgcggaggctatggcccgacatgggatgacacgtctgtacgccg +cactacacctc-ccccctgaggtgctgctaccacccggcacctatcacacgacctcgtacctcttaatccat +gacggcgaccgtgccgttgtgacctacgagggcgatactagtgcaggttataaccatgatgtctctatactt +cgtgcatggatccgcacaaccaaaatagtcggtgaccayccgctggtgatagaacgtgtgcgggccatcggt +tgccactttgtcttgctgctcaccgcagcccctgagccgtcgcccatgccttatgttccgtaccctcgatca +acagaggtgtatgtccgttctatatttggtcccggc---------ggatccccgtctctgtttccatcagct +t----------gctctactaaatcca-catttcatgctgtyccggttcatatttgggaccggcttatgctct +tcggcgccaccctagacgaccaggcgttttgctgctcacggcttatgacctatctccgtgggattagttaca +aagtcactgttggcgcccttgttgccaacgaggggtggaatgcctctgaggatgcccttaccgctgttatca +ctgcagcgtatctgaccatttgccaccagcgctacctccgcacacaggcgatatccaagggtatgcgccggc +tggaggttgagcatgctcagaaatttattacaaggctttacagctggctatttgagaagtc---------tg +gccgtgactacatccctggccgtcagctccaattttatgcacagtgccgccgttggttatcagcgggctttc +atcttgacccgagggtgcttgtatttgatgagtcggtgccctgc---cgttgtaggacgttccttaagaa-- +----agtagcgggaaaattttgctgcttcatgaagtggctggggcaaga------gtgtacctgcttcttgg +----------------aaccggccgagggtctagttggtgaccaagga--------catgacaatgaggcct +atgagggctcagaggttgatcaagccgagcccgcacatcttgacgtctcggggacctatgctgttcatgggc +gccagcttgaagctttgtatagggcacttaatattcctcatgacattgccgctcgggcgtcccgtctaacag +ccactgtcgagcttgccgcgagcccrgaccgcttagagtgccgtactatacttgggaataagacctttagga +caacagtggttgatggtgcccaccttgaagcaaacggccc------------------------tgagcagt +atgtcctttcatttgatgcctcccgtcagtctatgggggccgggtcgcatagtctcacttacgagcttactc +ccgctgggytgcaggtgaggatctcgtcc-------aacggcctggactgtaccgcgacgttcccc---ccg +ggtggcgctcctagcgccacaccaggtgaggttgccgccttttgcagtgccctttayaggtacaacaggttt +actcagcggcattcgctgacaggcggcttatggttgcaccctgaggggttgttaggcatctttccccctttc +tctcccggacatatttgggagtccgccaaccccttctgcggggaagggactttgtatacccggacttggtct +acatcaggattttccagtgatttctccccccctgaggcggctgcctttggtccggccgctgcctt----ggg +gccgcccc---actctacaccccctgttagtgatat-----------------ctgggtgct---------- +---------accgccaccc----cctgaagagc--------------cccagggtgatgcagtgcttgctcc +tcctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctcctgaatatgctcggccgcccagc +cccggtaggcctaag-------------------------------------ggctccgtgcgtaagccgcc +gacaccacc--------------------------------------accttctcgtacccgccgcc----- +-------------------ttctttacacctacccggatggcgccaaggtgtacgctgggtcattgttcgag +tcggattgcgattggctggttaatgcatcgaaccccggccaccgccccgggggcgggctttgtcatgctttt +taccaacgttaccccgagtcgt------tccacccgactgagtttgttatgcgtgacgg---cttagccgcg +tataccctgaccccccgccctattattcatgcggtggcccctgactacagggtagagcagaacccaaagagg +cttgaggcggcatatcgggagacttgctctcgccgtggtactgctgcctatccgcttttaggctcgggcatc +tatcaggtccctgtcggcctcagctttgatgcgtgggagcgtaaccaccgccccggggatgaactctacctg +accgaccccgctgccacc-------------------------------------------------tggtt +tgaggctaataagccaactca--------------------------------------------------- +------------------------------------------gccggctcttacgataactgaggatacagc +cc------------gcacggccaacctggcattggagatcg------------atgctgccacagaggttgg +ccgtgcttgt---gccggctgcacagttagccctggggttgtgcactaccagtttactgctggtgtgccagg +ctcgggcaagtcaaggtccgtacagcaaggggatgttgacgtggtggttgtcccaacccgggagcttcgtaa +tagttggcgtcgccggggctttgcggcctttacaccccacacagcggctcgtgtcactctgggccgccgcgt +tgttattgatgaagctccgtcactcccaccacatcttctgctgcttcacatgcagcgggcttcatctgtcca +tctcctcggtgacccgaatcaaattcctgctatagatttcgagcatgctggcctggtccctgccatacgtcc +tgagcttgcgcccaccagctggtggcatgttacacaccgttgccctgccgatgtgtgtgagctcatacgcgg +ggcctatccgaagatccagaccacgagccgtgtgttgcggtctctattttggaaygaa------cctgccat +cgggcaaaagttggtcttcacgcaggccgccaaagctgctaaccctggtgcgattacagttcatgaggccca +gggtgccacttttacagagaccacaatcatagccacggctgatgccaggggccttatccagtcatctrgggc +ccatgctattgtcgcacttacccgtcacacagagaagtgcgttatactggatgcccccggcctcttacgtga +agtcggtatatctgacataattgttaataacttc------------------------------ttccttgc +cggtg--gagaggtgggccatcatcgcccctctgtgataccccgtggcagccctggccagaaccttgagac- +-----attacaggcctttccaccttcttgccagatcagcgcctaccaccagttagctgaggaattrggtcac +cggccggctcctgtcgcmgctgtcctgccgccctgccctgagcttgagcagggtctgctgtatatgccgcag +gagcttacggtgtccgatagcgtgctggtctttgaactcacggacatagtccattgccgcatggccgcccct +agccagcggaaggctgttctgtcgacgcttgtgggtaggtatggccgtaagacaaagttgtatgaggctgcc +cattctgacgttcgcgagtccttggccaggttcattcccaccattggacctgtccaggctactacatgtgag +ctctatgagttggtcgaggccatggtggagaaaggacaggatggttctgccgtgctggagctcgacctctgc +aatcgcgacgtctcgcgtatcacattcttccaaaaagattgtaacaagttcactactggtgagaccattgct +cacggtaaggtcggccagggcatttcggcttggagyaagaccttctgcgccctgttcggcccctggttccgt +gctattgagaaagaaatattggccctgctcccgcctaatatcttttatggcgacgcctatgaggagtctgtg +ttcgccgctgcagtctctggagcggggtcatgcatg---gtttttgagaatgacttctcggagtttgacagt +actcagaataatttctccct------------------tggcctcgagtgtgtggttatggaggaatgtggt +atgccccagtggttgattcggctataccatctggttaggtctgcctggatcctacaagcgcccaaggagtcc +cttaagggcttttggaagaagcactctggcgagcctggcaccttactttggaacaccgtctggaatatggcg +atcatagcgcactgctatgagtttcgcgattttagggtcgctgcttttaagggtgatgattcagtggttctc +tgtagtgactaccgtcagagccgcaatgctgcggctctgatcgcaggttgtgggcttaaactaaaggttgac +taccgccctattgggttgtacgctggtgtggtggtagcccccggtctggggacactgcctgatgttgttcgt +tttgctggccggctgtctgagaagaactggggccctggtccagagcgggctgagcagctgcgccttgcggtt +tgtgaytttcttcgagggttaacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggagttagccctggattggtacataaccttattggtatgttgcagaccattgctgatggtaaggcccattt +tacagagactgttaaacctgtgcttgaccttacaaattccattatacagcgggaagaatgaataacatgtt- +t----------------tatgcagtgcccatggg------------atcaccatgcgccctcgggctgttct +gttgttgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagtcgactggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgccgatgtcgtttcacaatccggggctggagctcgccctc +ggcagccgccccg---------------cccccttggctccacttggcgtgaccagtccca----------- +------gcgcccctccgttgcttcccgccgtcgatctgcccca---------gctggggctgcgccgctgac +tgccgtgtcaccagcccctgacacggcccctgtgcctgatgttgactctcgcggcgctatactgcgacggca +gtacaayctatctacatctccgcttacatcttctgtagcctcrggcactaaccttgtcctttacgctgcccc +gttaaaccctcttttaccccttcaagatggtactaatacacacatcatggctactgaggcatctaattatgc +ccagtaccgggtcgttcgggctacgatccgttaccgcccgctggtgccaaatgccgttggcggctacgcaat +ctctatttcattctggcctcagactaccaccacccccacatctgtggatatgaattccatcacttccactga +tgttaggatactggtccaacccggcattgcctccgaactggtcatccctagtgagcgcctccactaccgtaa +tcagggctggcgttctgtcgaaacatcgggtgtggctgaagaggaggccacttccggcctggtgatgctctg +catccatggttcccctgttaaytcctacaccaacacaccttayactggggcgctgggacttcttgactttgc +gttagaacttgagtttaggaatctaacacccgggaacactaacacccgtgtctctcggtacacaagtacagc +ccgccaccggctgcgccgcggcgccgatggcaccgctgagctcaccaccacggcagccacgcgcttcatgaa +ggacctgcacttca---ccggtactaac---ggggttggtgaggtgggccgtggtattgctctgacactctt +caatcttgctgacacgctccttggtggtttgccgacagaattaatttcgtcggctgggggtcagctgtttta +ctcccgccctgtcgtctcagccaatggcgagccgactgttaagttatatacatctgttgagaatgcgcagca +ggataaggggattgctataccacatgatatagacctgggtgactctcgcgtggtgatccaggactatgacaa +ccaacacgagcaggaccggcctaccccctcgcctgccccgtcccgtcctttctcggttcttcgtgcaaatga +tgttttgtggctctc-----------------------------tctcaccgccgctgagtatgac------ +cagaccacatatgggtcgtccaccaacccaatgtatgtctcggacaccgtcacatttgt---taatgtggcc +acaggggcacaggctgttgcccgctcccttgattggtccaaggtcactctggacggccgcccgcttactacc +at-----ccagcagtactctaagacattttatgtcc-tcccgctccgcgggaagttatctttctgggaggct +ggcacaactaag--gctggctacccttacaattacaatacaactgctagtgaccagattctgattgagaatg +cggctggccat------cgtgtcgctat-atctacttacaccaccagccttgg--------------cgctg +gccctgtgtcagtctc-tgcggttggtgtgttggccccacactcggcccttgctatccttgaggatactact +gatt---------acccggcccgtg----ctcatactttcgatgatttctgcccggagtgccgwgccc---t +cggtttgcaggggtgtgctttccaatc--------taccattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaattaa-tt--------ctc-ttt------gt +gccc-cct--------tc-atgg-ctctt----gc-tt--------------------tatt-t-------c +tcttttct----gc----------------tttccgcgctcccwg---------------------gaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>KR905549.1/16609/1-6609 |Hepeviridae isolate Yunnan2013, complete genome +--------------------------------------------------------t----acctcggtac- +---catggacacttcccaatatttaaagtgtccacccatttccactgcccaggag---cagcagggcctaca +ggcggcccaggcctcgtttgcgaatgcttacgaggtccggccgtttttgtctcaggcccaggtcacgctgtt +gcttgaggtgttttctcccatccccttgatatttcgcccgcaggtgcattggggccatcctattcagcgcct +cattcatgactatcttgccgccta---tgtgcggcgtc-gggctggccgctgccttgaggttggtgctcacc +ctcgctccgtgaatgagcaccccgaggtgctccaccgttgcttcctccgccccgctggtagagatgtgcagc +ggtgggtctcggctccccggcggggccctgtggccaatatgaggcgcactgccctgcgggctttagcccccc +tggacaggacttactgttttgacggctttgctcagtgccagtttcaggcccagactggcctagcactctact +cgctgcatgaccttactccggctcagactgttgctgccatggttcgacacgggctgcagagcttatatgccg +tcctccacctt-ccacctgaggccctactgccggagggacggtactccaccccactttatactgccaatgtc +actaaggacagcgttgtggtcacctatgagggcgacacctccgccgggtatgtgcacagacgggatatcttg +tgccgctggcttaggaccgttgctgtcaacggttgtcaccgggcagtttttgagcgtgtccgttgcattggc +tgccactatgtggtgctcataacacatgtgcctgctgttgaacctatgccttacactccatttccccgcgcc +cagtgtgtctacgtccgctcagtatatggcccggct---------gggcgggcatcgcttttt---gttgat +t----------gctgccgcgactcta-ccttccatgccgtccctatagacatctgggataggcttatgcttt +ttggcaacacactggacgatcaggcgttctgctgctctcgcctcatgacttacctgcggggtatttcccatc +gtgtcgttgttggcacacttgttgctaatacaggctgggccgcggcggaggcagcccttactgctactatcg +ctgccgcttatctcaccatctgtcaccatcgttttctccgctcgcagggaatatctaagggcattcgtaggc +tacagaaggagcaggcccagtcattccttatgcggctctggtcctggcttt--------------------- +gccctggtggcgactacgggcgggacgtcggactctataaacaggccgctaactggatttcggcagggcttg +tgtttgacccccgcaccctgctctattctgatgttgagtggtgc---agctgctgtgtcccgtgccgtagac +ccccagcccccgtgacctgttgctgcttatggtcgaggcttcggcagtc------ctgtttctgttctgtgg +cttccctgctggccccagtccgc-gacgggcgagtcggttcacaggag--------tatgacaacccggcct +atgaaggctcactctgtgacccttgtgatgtcgctgacgctggtgtacc----------------------- +------------------------------------------------------------------------ +--------------gtcaccaccacagattgcgtctga---------------------------------- +----ggtagccgagtacctccgtcgcttaggcgatgcccg------------------------tgaccggc +ac---------------------------------------------------------------------- +-------------------------------------------------------------------tc--- +------------------------------------------------------------------------ +-----------------------caacccgttactgacacctgaattacttcttagtccgtttgtgttaccg +ttccggacttctattaggacacctactaatccttttgacgggcagt-tgccctataca---------gtttg +gcggccgg------------------------------aaccaccaccaccccgacccccgacac------- +-----------------------ctgttgatg---------------------ctgggccttgt-------- +-ccggccgtgccaccgc------------------------------cgtcgaccggcccggctgctatgga +tcaac------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------gcacggagcctactaacccacctag- +--tgccgactttgagccc----------------------------------ccccctgcggcgccgccgcc +cgttgccccgcctacgacatccagcgggtctagggacgttgtcccctctccgcccggatgcgtcgctgcggc +gcccgctcggggtgagg--ttttggctcgttatgcagatggctccgtcgtctatgccggctctatttttgat +tctcgcgctgtttggcttgtgaacgcatctaacccacagcatgtgcccggcggtgggctttgcggcgcgttt +gctcagcggtacccagagtcat------tcgaccatgagcgttttgtggcgcaccgcgg---ccgtgctgct +tacacccatagcccccggccgattatccatgcggttgctcccgactatcgacaggcacgggatccggaggcc +cttgaagtcgccttcgcggaggcctgttcccgcagtgaggttgcggcctttccgttgttaggcgccggtata +tattgtgtcccccgtcatgaatcattcgccgcttgggaacgtaaccatctaccgggcgatgaactgtggctt +gatgctgattctgccgat-------------------------------------------------tggtt +taagcgcacccgtgcgattgcac------------------------------------------------- +------------------------------------------ggcgccctaatgaattattacttacgccgg +ctcagtgt-----gatgccatcaacctggctctggatgtcggg---------cgccgtgaccctgcgtatag +gggctatctc---ggcgacgctactgtcgagccgggctctgtgcgttataggtatattgccggcgtgcctgg +ttctggtaaatctacaggtatccggcgtccagaagttgacattgtggtttgtcccacccgcgagcttcggga +ccgatggcgggcccgtgggtttaccgctcttacaccgcatgttgcactggctcgagcccgcggcgccaggtt +agttatcgacgaggctccggcggttgcccccgagttgctggctctattaatgcagagggctgctgatgtggt +actgcttggggacccgaatcagataccagccttggattttgacggtcatggcctcgttgattgcattcgcct +gcctatacagccaacagagtggcgcaccgttacgcaccggtgcccccacgatgtctgctaccttatccggcc +tgactacccaaacattactacctcgagccgtgtccgccgctccattctattctcggga------cccgagcg +tgggcaacggctcgtcttcacccaggcggcgaaggccgcttggcccaagtccatcacggttcacgaggccca +aggcgccacctttgaccataccacgctcatcgcgacctcagatgcacgtggccttctaatgtcctcccgtgc +ccacgccatcgttgcgcttacgcgccacacggagacttgtcgtattgtggacgaggctggtctgcttcggga +tctgggggttactgacgcgatgctcagtaatttc------------------------------ctgcttgc +cggcg--g--ggctgaattttcagcacgcccggcctctattccgcgccaa-ccagttgaggccgtagaggct +---gacctttctgcggtccccccctcttgtgttgaggctgcttatcaccagctcagtgagaacctgggccac +cggcctgccgaggttgctgccatattgccccccatcccagaagttgaacagggccagcttaagcttccctta +aatttgaacatgcgttatgagacctgcatgttggccttaactgacacagtccactgccgtgtggccgctccg +gcagatcgccgcgcggtccttggtacgctcgcggggcggtacgcgaaacgtacccggctctaccgtggcccc +gcgaggtccgtgcgcgatgccctgcgtcaatgggttcctacgctaccggttttgacacctacctcggtggag +ctcgctgagctcgtcgaagctatggtaactaaggggcaagatgggtctctggtcctcgacctggacctcgcc +gagtccgctgtcacccggataagcttctttcagaaggactgtaacaagtttactactgaagagacgcatgcc +cactttaaggtcggccaaggtatatcagcctggtccaagacaactgtggctcttttcgggccatggtttcgt +gccatcgagaaagccgttgtcgaccacctgccccccactgttttctacgctgactgttttgagcccgcgttg +ttttctgctgcggttcagggggcctctgattgttta---gtttgggagaatgacttttctgaatttgacagc +actcagaacgatctatcttt------------------agcacttgaggtgctgttgatggaggaggtgggc +atgcctgagtggttgcgcggcttgtacttcgttatcaggtctgcgtggaagctctatgccccgcaggagtct +ttacgcgggttctggaagaagcattctggcgagcccggtaccttgttattcaacactatctggaacatggca +gttatatcatcctgctatacttttgaaggccttgcagctgcggcttttaaaggcgatgattcagtggtcctt +tgccgggctgtcgccccgactataggcggcgccgaccttattgcccgctgtggtctcaaactcaagacagca +ttccgccagattggcggctatgcggggttcatagtggccccgggtgtcggtgttgtgcccgatgttgttagg +ttcgccggtaggcttagtgacaagaattttggccccgatccgcagcgcgaagccgaccttcgagacgccgtt +actgactttttgaaccggtgcaccaacctggcgcagttgtgtatccagtttggtgccttat-------ttta +tggcgtcgagccggggctcattctgaacctctttggggcgcttaagaccgttgcccttggccaggctacata +ccatactcatattaggcccatcttggattgtacacatgt---------agggcgtgtctgaataacattcat +tg---ttggcccccccatgtgcgtcgaccttga-------------tccatcgtgtggttgtcacctgctct +gcttattctgtttttgttcatggaccccaccttcgcacct-------------------------------- +ccccctg------ccgg---------tggcggtg------ggagtgggcgtcggcg-acgcgcccgtggtgc +tgg--------------------------------------------------------------------- +--------------------------------------------------------gcagaatgtcacct-- +----------------------------ctgcccaggcccctttt--------------------------- +--------------------------------------cccgg---------gttatggtc----------- +------------------------------------------------------------------------ +-tataatctctccacctctcccctctctgcactgatcgctaccggctctaatttgatgatttactctgcccc +gcttaatccgctactgccgctgcaggatggcactaacacgcatatcatggccaccgagtccagcaattacgc +tcagtatcgcgtctcagctgcaaccgttcgctttcggccgctggtccccaattccgttggcggctatgcttt +gtccctctctttctggcctcagtccaccaccacgcccacctcggtggacatgaactctatcaccgctactga +tgtgcgtttggtcctacagcctggcttatctggagagcttgttatacctagcgagcggctgcattatcggaa +ccaggggtggcgctcggttgaaaccaatgccgtgggccaggaggagtccacgtctggtctcttgctcctgtg +cttacatggcacccctgttaattcatttaccaatagcccctattccggtgcattggggcttttggattttgc +attgcagatcgagctccgtaatctcacccctggcaataccaacactcgcgtgagccgctatcgctctgttgc +ccgccatatgatgaagcgcgggcccggcggggccgctcaagtcaccactgcctccgccatgcgcttttccaa +ggatgctgcttttg---ccggtggcaattcatcaattggcgatgttggccggtcgatcgggcttgccatctt +taacattgcggacacgctacttggcgggttaccgtccgagttgctctccgccgctggcggccaggtctttta +tacaagacctgtccagtcggccaattctgagcccaccgttcggctgtatgactctgttgagaatgcccagct +agatcgcccaattattatcccccatgatgttgatcttggtcagtcagctatttcgatccaggactatgacaa +ccaacatgagcaggaccgtcctacaccatcgccagcaccccagaggcctttaaccagtttacgacataatga +cgtcctgtggcttag-----------------------------cctcacggatgctgagtacacccagtca +cagactccccagagttcgtca------ccagtgtacttctcgaaacagacaactattgt---taatgttgcc +actggcagtcttgccgttgctcagtccaccgattggtctaaggccactatcgacggcaagcctctgcctact +gt-----gtcatctggctccagtcattggtaccgca-tacccttaaatggtaagatttccttctgggatccc +gtttcgggtaag--gctggttacccatataactataatactatcgactcagattctatttacatt---tctg +cagccgatggc------catgtttacat-ctcaacttataccacctccttagg--------------caccg +gccccgtcagcatttc-tgcggtgggtgctgttggtgccgcacccgctgtcgtcaggtctgattctgtcgtg +gatatttcacag-------------------cacactttcgatgatttctgtcctgtgtgcagcaagc---t +tgcgctccagggttgtgcatttcagac--------cacattggaggagttgaagcgcctcggcgcccctact +gtctcgggtagagtttagtttatttctttcctgaaatcccgtttag-tt----tt-tgct----------at +gaaaactttt------tc------------------tc---------------a----tatt-t-------t +ccttttct----gca----------------tttcgctctctat---------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>KY496200.1/17300/1-7300 |Hepeviridae isolate KORRb1, complete genome +---------------------------ggcagacca-cgtaag-------------t-----ggtcgatgc- +---catggaggcccaccagtttattaaggctcctggcatcacaactgccatcgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggttattcggccgtttctgtcccggctacagactgagattct +cattaaccttatgcaaccccggcagctggttttccgcccggaggttttctggaaccaccctatccagcgtgt +tatacataacgagctagagcagta---ttgtcgggccc-gtgctgggcgctgcctcgaggtcggagcgcacc +ctagatctatcaatgataacccaaatgttttgcaccggtgtttcctccggcctgttgggagggatgtccagc +gctggtattccgctcctacccgcggccctgctgccaactgccgccgctctgcgctgcgtggcctcccacctg +ttgaccgcacctattgttttgacgggtttgctggttgcaccttcgcggctgagaccggtattgccctctact +ccttacatgacctgtggcctgcagatgttgcggaggcaatggcccatcatggaatgacacgcttgtatgctg +tattacatctc-ccccctgaggttttgctgccaccaggtacctatcacaccacctcctaccttttgattcac +gacggcagtcgtgctgtcgtgacttacgagggtgatacaagtgctggttacaatcacgatgtctctatcctt +cgcgcttggattcgcacgacaaaaatcacaggtgatcacccgctggtgatcgagcgtgtccgcgctattggt +tgccattttgtattactgctcactgcagctccagaaccgtcgcccatgccctatgtcccattcccccgttcg +acagaggtgtttgtccgctcaattttcggtccgggc---------ggctcaccctctctcttcccgtcagca +t----------gctccacaaaatcta-cctttcatgctgtccctgtccacatttgggataggcttatgcttt +ttggtgccacgctggatgatcaggctttctgttgctcgcggcttatgacttatctccgcggcattagctaca +aagtcactgtcggtgctcttgttgctaacgagggctggaatgcttctgaggatgccctcactgcggtaatca +ccgcggcgtatcttaccatctgccaccagcgttaccttcgcactcaagcgatttctaaaggcatgcgtcgac +tggagcttgagcacgcccagaagttcatcactaggctctacagctggttgtttgaaaagtc---------tg +gccgtgattacatccccggccgccagttacaattttacgcacagtgccgccgctggctctccgcaggctttc +atctagaccctagagtgcttgtttttgatgagtctgtgcactgt---cgctgcaggggttttgtgaagaa-- +----tgtggccaggaaggtctgttgctttatgaaatggcttggccagga------gtgcacctgcttcttgg +----------------agcccgcggagggcctgcttggcgaccagggc--------catgataatgaggctt +atgaggggtctgagatcgaccccgctgagcccgctccctctgatgtatcagggacctatattgtccacgggc +agctgttggtagatctatacagggcacttaacgtcccgcaagatattgtagctcgagctgcccgtctgtcag +ctactgttgagctcgccgccggcccaggacggcttgagtgccgtactattttgggcaacaagaccttccgta +ctacaattactgacggcgctcaattggaggcaaacggccc------------------------tgagcagt +atgtcctttcatttgatgaagcccaccagtgcatgggtgccgggccgtatagccttgtgtatgagctcactt +ctagcggattgcaggttaaaatttcatct-------aatggcttagagtgtacggcggtcttccct---ccc +gggagggccccgagtgttggtgctgcagaggttacggccttctgtagcgccctgtataggtataatagaacc +atccagcggcactcgattgtcggcgggctctggttacaccctgaggggttgctgggcctcttcccacctttc +tcccctgggcacttttgggaatccaataacccgttttgcggtgaggggaccctctacactagaacttggtcc +acgtctggtttctctagtgatttttcaccactcgaggcagccgctactgtccctccccctgccgac------ +-tcggttcaaatgccgaccccccccgtggctgacgc-----------------ccgagccct---------- +---------gcctcctacc---------------------------------------------cctgtgac +cccca------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------------gggttattgacccacctg-- +-ccgctacgcccgaa-------------------------------------cctcctgctaataagccatc +agggcgtcc--------------------------------------tccagcccgtaaccgccgcc----- +-------------------ttctttatacctatccagatggcgccaaggtttactctgggtccctgtttgag +tctgactgtgattggctggtcaatgcatctaaccctgggcaccgtccgggcggtggcctctgtcacgccttt +taccagcgtttccctctgtctt------ttgatcatactaagtttattatgcgggatgg---gctcgccgct +tataccttgtcacctcgcccgatcatacatgcggtagcccctgactatagggtcgctcataaccctaaaagg +ctggaagcggcgtatcgtgagacctgttcgcgcctcggcactgccgcctacccgctattaggctcgggcatt +tatcaggtccctgttggcccgagctttgacgcctgggaacgaaaccaccggcctggcgatgaactctatctt +actgaacctgcggcagcc-------------------------------------------------tggtt +cgaggccaataagccggcacggtcctctacacctatag---acgacacggcctcagctgaccgtcccgcagc +cggagccgactccccgccaggagtcggcaccggtccggttctgcccgccctgaccataaccgaagatgcggc +tc------------gagtggccaatcttgcattggaaattg------------actccaagactgagctggg +ccgcgcttgc---gccggttgcgctgtcagcccgggagttgtccactatcaatttactgcgggcgtccccgg +gtctggtaagtcgaggtccatacagcagggtgatgttgatgttgtggttgtgcctacacgcgagctacgcaa +tagttggcgccgccgcgggtttgccgcatttacaccccactcggccgctcgtgttactagcggccggcgtgt +tgtaattgatgaagcaccatcacttccacctcacctgcttttactacacatgcagcgtgcatcatctgtgca +tcttcttggcgatccgaatcagatccctgcaattgattttgagcatgccggtcttgtccctgcaattcgtcc +agagctggcccccaccagctggtggcatgtcacacatcggtgtcccgcggacgtttgtgagcttatacgcgg +ggcgtaccctaagatccagaccactagccgtgtgctaaggtccctgttttggggtgac------ccccctgt +tggccagaagttggttttcacgcaagctgcaaaagcagtctaccctggtgcaatcaccgtccatgaagccca +gggggccacatttacagagaccactatcatcgcgactgcagatgcgagaggcctcatccagtcgtctcgagc +gcatgccattgtcgcgctgactcggcacacggagaagtgtgttattttggatgcccccgggttactccgcga +ggtgggagtgtctgatgtgatagttaataatttc------------------------------ttcctggc +cggtg--gcgagatcggccaccaccgtccctctgttataccccgcggtaaccctgaccgaaatctcgatac- +-----ccttcaggccttccccccttcctgccagattagcgcctaccaccagttggctgaggagcttggccat +cggcctgcccccgtggctgctgttctgccaccctgccctgagcttgagcagggcctgctgtatatgccacag +gagctcactgtgtctgacagtgttttagtttttgagctaactgatatagtccattgtcgcatggctgctcct +agtcagcggaaagccatcctttcgacgctcgttggccggtacgggcgtcggacgaagctgtatgaggctgcc +cactctgatgttcgtgaatcgcttacgaggtttattcctactatcggccctgtgcaggccacaacgtgtgag +ctttatgagctggttgaggcaatggtagagaagggtcaggacgggtcagccgtccttgaacttgacttgtgc +agccgagatgtgtcccggataacgttcttccagaaagattgtaataagttcacaactggggagacgatcgcc +cacggcaaagtaggccaggggatatcggcctggagcaagaccttctgcgccttattcggcccctggttccgg +gccattgagaaacagatattagccttgctcccgcccaacatcttttatggtgatgcctacgaggactctgta +ttctctgcgaccgtcactggtgctgggtcgagcatg---gtgtttgagaacgacttttcggagtttgacagc +acccagaataacttctcgct------------------cggcctcgagtgtgtgattatggaggaatgtggt +atgccccagtggttagttagactgtaccatttggtgcggtctgcctggattctacaggccccaaaagaatct +cttaaaggcttttggaagaagcactccggcgagcccggcacactactctggaacaccgtttggaacatggcg +gttatagcacattgttatgagttccgtgatttcaaggtagccgcatttaaaggggacgactcggtggtcctt +tgtagtgactatcgccagagtcgctttgcggcggccttgatcgcaggttgcgggcttaagcttaaagttgac +taccgccctgtcgggctctatgccggagttgtggttgctccaggtcttgggacgttgcccgatgtcgtccgc +tttgccggtcggctgtcagaaaagaattggggccctggccccgagcgggcggagcagttacgccttgctgtt +tgtgatttcttaaggaagttaacgaatgttgcccaggtttgtgtcgatgttgtgtcgcgtg-------ctta +tggggtgagccctgggcttgtgcataaccttattgggatgctgcagactattgccgacggtaaagcccacta +tacagagactgtcaagcctgtactagatcttacaaattctattgtacagaggttagaatgaataacatgtt- +t----------------tctgcatcgcccatggg------------ttcgccatgcgccctcgggctgttct +gttgctgctcttcgtgtgtttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagtcggctggcc------------gccgtcgtgggcg-gcgcggcggcggtcc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctattttcat---- +--------------ccaaccaaccccttcgccgctgacgttgactcacatcccgggcctggagcccgacccc +gtcagccagcccg---------------cccccttggcacctcttggcgtgacctgtccca----------- +------gcgcccctccgctgccccgcgccgtcgatctgcccca---------gctggggctgcgccgttgac +tgctgtttcacctgcacctgatacagcacctgtcccagatgttgactcacggggggctattttacgccgtca +gtataatctctcaacctcacctctaacctcaactgtcgcctcaggcaccaatcttgttttgtatgctgcccc +gctcaaccccctcctgcccctccaggatggcaccaatacccacattatggcaactgaggcatctaattatgc +tcagtaccgggttgtccgagccacgatccgctatcgccctttggtgcccaatgcagttggtggctatgcaat +ttctatttccttttggccccaaactactactacccctacctcggttgatatgaactcgatcacttcgactga +cgttaggatacttgtccagcccggcttggcctccgagcttgttataccgagtgagcgcctccactatcgtaa +tcaagggtggcgctctgtggagacctccggtgtagccgaaaaagaggccacttccgggcttgttatgctctg +tattcatggttctcctgtaaattcatacactaacaccccttatacaggtgctctggggcttcttgactttgc +gcttgagattgagttccggaatttgaccccagggaacactaacacgcgtgtttcccggtacactagcactgc +tcgccatcgtctgcgccgtggcgccgatgggaccgccgaacttacaactacagcggcaacacggtttatgaa +agatctccatttta---cgggaatgaac---ggggttggtgagattggccgcggcatagccctgacgctgtt +taacttagctgatacacttcttggtggtctgccgacagaattgatttcgtcggccgggggtcaggtattcta +ctcccgccctgtcgtctcagccaatggcgagccgactgtcaagttatatacatcagttgagaacgcacagca +ggacaaggggatcgctatacctcatgatatcgaccttggcgattcccgtgttgttattcaggactatgataa +tcagcacgagcaggaccggcctaccccgtcaccggccccctctcgccctttttctgttttacgcgctaatga +tgtgttgtggctttc-----------------------------tctgactgctgctgagtacgat------ +caaaccacttatggttcgtcgactaaccctatgtatgtttctgacactgtcacttttgt---taatgtggca +acaggcgcccaggccgttgcccgttctcttgattggtctaaggtcactttggatgggcggccgcttaccacc +at-----ccagcagcactctaaaacgttctatgttc-tccctttgcgcggcaagctttccttttgggaggct +ggcaccaccaag--gctggctatccttataactataacaccactgctagcgaccagatcttgattgagaatg +cagctgatcat------catgttgccgt-ttccacctacactacgagtttagg--------------cgctg +gtcctgtatctatctc-tgcagttggtgtgcttgctccgcattctgttttagctgtcctcgaggatactatt +gatt---------accccgctcgcg----ctcatacttttgacgacttctgtcctgagtgccgtaccc---t +cggcctacagggctgtgctttccagtc--------tactgttgctgagctccagcgcct------------- +--------taagatgaaggtgggtaaaacccgggagtcttaattaa-tt----ct-tgct----------gt +gcct-acct-------tc-tgtg-ctgat---cgt--t--------------------tatc-t-------c +ttatttct----gcg----------------tttcgcgctcccaa---------------------aaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>KY436898.1/17276/1-7276 |Hepeviridae isolate ME2016rab52, complete genome +-------------------------------------cgcaag-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcatcacaaccgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggttattcggccgtttttgtcccggactcagactgagattct +tattaaccttatgcagccccgacagctggtcttccgcccggaagtcttttggaatcaccctatccagcgtgt +catccataatgagttggaacagta---ttgccgagccc-gtgcggggcgctgtctcgaggtcggagcgcacc +caagatctatcaatgacaaccctaacattctgcaccggtgtttcctccggcctgtcgggagggacgttcagc +ggtggtactccgcccccacccgcggccccgctgccaactgccgccgctccgcgctgcgtggcctcccccctg +ctgaccgtacttattgttttgacgggttttccggctgtacgtttgcagccgagactggtatcgccctatact +cccttcatgatctgtggcctgctgatgtcgcggaggcgatggcacaccacgggatgacacgcctgtacgctg +tgctacatctc-ccccccgaggtcttgttgcccccgggcacctaccacactacctcttacctcttgattcac +gacggcagtcgtgctgtcgtgacctatgagggtgacaccagtgctggttacaaccatgatgtttccgttctc +cgcgcttggatccggacgacaaaagtcattggcgaccaccctctggtgatagagcgtgtccgtgcaatcggt +tgtcatttcgtgttgctgctcaccgctgcccccgaaccgtcccccatgccctatgttcctttcccccgttcg +acagaagtgtttgtccgttctatatttggcccgggt---------ggctccccctccctcttcccgtcagct +t----------gctctacaaagtcca-cctttcacgccgtccccgtccatatttgggacaggcttatgcttt +ttggtgctacactggatgatcaggctttttgctgctcgaggcttatgacttaccttcgtggtattagttata +aagtcactgtcggggcccttgttgccaacgaaggctggaatgcctctgaggacgccctcactgcggtaatta +ccgctgcgtatctcactatttgtcatcagcgctacctccgcacccaggctatttctaaaggtatgcgccggc +tggagctcgagcatgcccagaagtttatcaccaggctttatagctggttgtttgagaagtc---------tg +gccgtgattacattcctggccgtcaactacagttttatgcgcagtgccgccgttggctctcggcgggtttcc +atttagatccgagggtacttgtctttgacgagtctgtgcactgc---cgctgtaggagctttgtgaagag-- +----tgtgaccaagaaggtttgttgcttcatgaaatggcttggccagga------gtgtacctgtttcctgg +----------------agcctgcagagggcttgctcggcgatcagggc--------catgataatgaggctt +atgaggggtctgaggttgaccccgccgagcccgccctctccgatatatcggggacctacaccgtccacgggc +agctcttggcagatttatataaagctctcaacatcccggatgatgttgctgcccgcgccgtccgtctgtcag +ctactgttgagcttgttgctggcccagggcggcttgagtgtcgcaccttcttgggcaataagaccttccgca +ctacaattgttgacggcgctcagttggaggcaaatgggcc------------------------tgagcagt +atgtcctttcatttgatgaagcccatcagtgtatgggcgccgggcagcatagcctcgtgtatgagctcaccc +ctaacggtctgcaggttaaaatatcatcc-------aacggcctggactgtacggcggttttcccc---cct +gggagggcccccagtgcaggggctgcggaggtttcagctttctgcagcgccctgtatagatacaacagggct +atccagcggcactcgctcgttggtgggctgtggttgcacccggaggggctgctgggcctttttccacctttc +tctcctggtcatctttgggaatctgcgaaccctttttgtggcgaggagactctttatactaaaacttggtcc +acgtctggcttctctagtgatttttcaccacctgaggcggccgctaacgccccccccccccccact------ +-ctgccccccacgccggctctccctggggctggcgc-----------------gcgagtcca---------- +---------gctgccacct---------------------------------------------tctgagac +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------------ggtgcgcccgcctgcttg-- +-ctaatacccccgag-------------------------------------ccttccactcataagccacc +ggagcggcc--------------------------------------ttcggtccgcagccgccgcc----- +-------------------tcctttacacctacccagacggcgccaagatttattctgggtctttgttcgag +tcagactgtgactggctggttaatgcgtccaaccctggccaccgcccaggcggcggtctttgtcacgccttc +caccagcgtttccctcaatcct------ttgaccacaccaaatttattatgcgggatgg---gctcgccgca +tatacgctgtcacctcgccccattattcatgcagttgcgcctgactatagagttgcacataacccaaagagg +ctggaggcggcgtaccgtgagacctgctctcgtctcggcactgctgcttacccgttgttgggctcaggcatc +tatcaggtccctgtcggccttagttttgatgcttgggagcgcaaccacaggcccggcgacgaactctacctt +accgagccggctgccgcc-------------------------------------------------tggtt +tgaagccaacaggccggcccggtcctttacgcccgccgccccaggcacggcctcggccggcggtccttcagt +ggggaccggcccttcgccaaacactgctggagtcccggcattacccgccctgaccataacagaggatgttgc +cc------------gcacggccaacctcgcattggcaatcg------------actctaaaactgagctggg +ccgtgcttgt---gctggctgtaccgttaaccctggagttatctactatcaatttactgcgggtgtccccgg +ctctggcaaatcgaggtcgatccagcagggtgatgttgatgtggtggttgtgcccacccgcgagctccgtaa +tagctggcgccgccgcgggtttgcagcattcacgccccattcggccgcccgtgtttctggcggccggcgtgt +tgtgattgatgaggccccatcccttccgcctcacctgcttttattgcacatgcaacgggcctcatcggtgca +cctccttggcgacccgaaccagatacctgccattgacttcgagcacgccggtcttgttcctgcaattcgccc +cgagctggcccctaccagctggtggcatgtcacgcatcgctgccccgcggatgtctgtgaacttatacgtgg +ggcgtaccctaagatccagactaccagccgcgttttgcggtctctgttttggggagac------ccccctac +cggtcagaaactcgttttcactcaagccgctaaagctgccaatcctggtgcgatcactgtccatgaggccca +gggggcaacatttacagagaccacgattatcgcaacggctgatgctaggggccttatccaatcgtcccgggc +gcatgccattgtcgcgctcacgcggcacacagagaagtgtgttatcatcgatgctccagggttgctccgtga +ggtgggtatatcggatgtgatagttaataacttt------------------------------ttcttggc +cggcg--gtgaaatcggccatcaccgtccctctgttatacctcgcggtaacccggatcagaaccttgaaac- +-----ccttcaggcttttcccccttcctgccagattagtgcctaccaccagctggccgaggagcttggccac +cggcccgcacctgttgccgctgttctgccgccctgcccagagcttgagcagggtctcctgtatatgccgcag +gagcttacggtgtctgatagtgtcttggtttttgagctaacagatatagtccattgccgtatggctgccccc +agccagcggaaagccgtcctctcgacgcttgttgggcggtacgggcgtcgaacgagactgtatgatgctgcc +cactcggacgtgcgtgaatcactaacaaggtttattcccgccatcggccctgtgcaggctacaacgtgtgaa +ctttatgagctggtcgaggcgatggtggagaaaggtcaggacgggtcagctgtgcttgagctcgacctttgt +aatcgagatgtgtcccggataacgttctttcagaaggactgtaataaattcacaactggggagactatcgcc +cacggcaaagttggccaggggatatcggcttggagtaagaccttctgcgctttattcggcccttggttccga +gccattgagaagcagatactggccttgctcccgcctaatgttttttatggcgacgcctatgaggactctgta +ttctctgcagctgtcactggctcggggtcaagtatg---gtctttgagaatgatttttcggaatttgacagc +actcagaacaacttttcact------------------cggtcttgagtgcgtgattatggaggaatgtggt +atgccccagtggctagttaggttatatcatctggtccggtctgcctggattttgcaggcccctaaggagtct +ttgaaaggattttggaagaagcattccggcgagcccggcacactgctttggaacaccgtttggaatatggcg +gttatagcgcattgctatgagtttcgcgattttaaggctgccgcttttaaaggggatgactcggtggtcctt +tgtagtgactaccgccagagtcgctttgcggcggccttgattgcgggctgtgggcttaagcttaaggttgac +tatcgccctattgggctctacgccggtgttgtggttgctcctggtcttggtacgttgcccgatgtcgtccgg +tttgccggccggctgtcagaaaagaactggggtcccggccccgaacgggccgagcagttacgcttggctgtc +tgtgacttcttgcgaaagttaacgaatgttgctcaggtttgtgttgatgttgtatcccgcg-------ttta +tggtgtgagtcctgggcttgtgcataatcttattggcatgctgcagactattgccgatggtaaggcccatta +tactgaaactgtgaagcctgtgttggatcttacaaattctattatacagaggttggaatgaataacatgtt- +t----------------tctgcattgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgctcttcgtgtttttgcctatgttgcccgcgc---------------------------------- +-caccgg------ccggtcagccggctggcc------------gccgtcgtgggcg-gcgcggcggcggttc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctattttcat---- +--------------ccaaccaaccccttcgccgctgacgttgactcacattccgggtctggagcccgtcccc +ggcagtcagcccg---------------cccccttggcacctcttggcgcgacctgtccca----------- +------gcgcccccccgctcccccgcgtcgccgatctacccca---------actggggctgcgccgttgac +tgccgtttcacccgcacctgacacggcgcctgtccctgacgtagactcacgtggggcgattctgcgccgtca +atacaatctctctacctcgcccctaacttcaactgttgcttcgggcactaaccttgtcctttatgctgcacc +gcttaacccccttctgcctctccaggatggcactaacactcacatcatggcgaccgaggcgtctaactatgc +tcagtaccgggttgtccgggctacaatccgttatcgccctctggtgcccaatgcagtaggtggttatgcgat +ttctatttcgttttggcctcaaactactaccacccccacctctgttgatatgaattccattacttcaaccga +tgtcaggatccttgttcaacctggtttggcatctgagcttgttataccgagcgagcgcctccactaccgtaa +tcaagggtggcgctccgtagagacttccggtgtggccgaggaggaggctacgtccgggcttgttatgctttg +cattcatggctcccctgtgaattcgtacactaataccccttatacaggggctttagggcttctcgactttgc +gcttgagattgagttccggaatttgaccccagggaatactaacacacgtgtatcccggtacaccagtactgc +ccgccatcgtttgcgccgtggtgccgatgggaccgccgaacttacaactacggcggccacacggtttatgaa +agacctgcacttta---ccgggacgaac---ggggttggtgagattggccgtggtatagccctgacgctgtt +caatttagctgatacacttcttggtggtttgccgacagaattgatttcgtcggccgggggtcaggtattcta +ctcccgtcccgtcgtctcagccaatggcgagccgactgtcaagttatatacatcagttgagaatgcacagca +agataaggggatcgcgatacctcatgacatcgatcttggtgattcccgcgttgttatccaggactatgataa +ccagcatgagcaggatcggcctaccccttcaccagccccctctcgcccgttctctgtccttcgcgctaacga +cgtgttgtggctttc-----------------------------gcttaccgctgctgagtacgat------ +cagactacttatggttcgtcaactaaccctatgtatgtctcagatactgtcacatttgt---caatgtagca +acaggtgcccaagccgtcgcccgttcccttgactggtctaaggttaccttggatgggcgaccgcttaccact +at-----tcagcagcattctaaaacattttatgtcc-tcccgcttcgtggtaagctttctttttgggaggct +ggaactactaaa--gctggttacccctacaattataacactaccgccagcgaccagatcttaatcgaaaatg +cggctgatcac------cgtgttgctgt-ctccacctatacaactagcttggg--------------cgcag +gccctgtgtccatttc-tgcagttggtgtacttgccccgcattctgtcctagctgtccttgaagatactatc +gatt---------accccgctcgcg----cccatacctttgatgatttttgccctgaatgtcgtactc---t +cggcctgcagggctgtgctttccaatc--------tactgttgctgagcttcagcgtct------------- +--------caagatgaaggtgggtaaaacccgggagtcttaattaa-tt----tt-tgtt----------gt +gcct-tcct-------tc-tatc-ctgtt---tccttt--------------------tatc-t-------c +ttacttct----gcg----------------tttcgcgctccctg---------------------gaa--- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>KU176129.1/17211/1-7211 |Hepeviridae isolate TLSB, complete genome +--------------------------------------------------------------ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagttggtttttcgacctgaagtgctctggaatcatcccatccaacgagt +tatccataatgaacttgagcagta---ctgtcgggccc-gggctggtcgttgtcttgaggttggggcccacc +caagatccgtgaatgacaacccaaatgttctgcaccggtgttttctacgaccagttgggagagatgttcagc +gctggtactctgctcctacccgtggccctgcggctaactgccgccgttctgccttgcgtggcctccccccag +ttgatcgtacctattgttttgatggattctcccgctgctcatttgccgcagaaactggggttgccctttatt +ctctgcatgacctctggccggccgatgttgcggaggctatggcccgacacgggatgacacgcttgtatgctg +cactacatctc-ccccctgaagtactactaccacccggtacctaccatacaacttcataccttctgatacac +gacggtgatcgtgctgttgtgacctatgaaggtgatactagtgcaggctataaccatgatgtttccatactt +cgtgcatggattcgcacaactaagatagtcggcgatcatccgctggtgatagagcgtgtgcgggccattggc +tgccattttgtgctgctgcttactgcagcccccgagccgtcaccaatgccttatgttccatacccccggtcg +acagaggtgtacgtccgctctatattcggccctggc---------gggtccccatccctattcccatcagct +t----------gctctacgaaatcca-catttcatgctgtcccggttcatatttgggaccggctcatgcttt +ttggcgctactctggatgatcaggcgttttgctgttcacggcttatgacctatctccgtgggattagttaca +aggtcactgttggcgcccttgtcgctaatgaagggtggaatgcttcggaggacgctcttaccgctgttatta +ctgcagcgtatttgaccatttgccatcagcgttacctccgtactcaagctatatccaagggtatgcgccgac +tggaggttgagcatgcccaaaaatttattacaagactttatagttggctgttygagaagtc---------cg +gccgtgactatatccccggccgccagctccagttttatgcacagtgtcgccgttggttatcggcgggtttcc +atcttgacccaagggtgctggtttttgatgagtctgtgccctgc---cgttgtagaacatttcttaagaa-- +----ggctgtgggtaagttctgctgttttatgaagtggttgggacagga------gtgcacctgctttttgg +----------------aaccagcagagggtctagttggtgaccatggc--------cacgataatgaggcct +atgagggctctgaggtcgatcaggccgagcccgcccatctcgatgtttctgggacttatgccgtccatggcc +gccaacttgaagccctgtatagggcgcttaacatcccgcatgacatcgctgcccgagcctcccgtttgactg +ccaccgtcgaactcgttgcaggtccagaccgcttggagtgccgcactgtgctcgggaacaagaccttccgga +cgacggtggttgatggcgcccatcttgaggcgaacggccc------------------------cgagcagt +acgttctttcgtttgacgcctctcgccagtccatgggggccgggccacatagtctctcctatgagctcactc +ctgctggtttgcaggtcaagatttcatct-------aatggcctggattgcactgcaacattcccc---ccg +ggcggggcccctagcgcagctccgggggaggtagcagccttctgcagtgccctttacaggtacaacaggttc +actcaacgccattcgcttataggcggcctgtggctgcatcctgaggggttgttgggtatcttcccccctttc +tcccccgggcacctctgggagtccgctaaccctttttgtggggagggaaccttgtacacccggacatggtca +acatccggtttctctagtgacttttccccccccgaggcagccgtcgcagcgccggctgctgcccc----ggg +gccacgcc---accccacacctcctgttagtgacat-----------------ttgggtgct---------- +---------accgccacct----tctgaagaat--------------ttcaggttgacacagcgcccgctcc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcccgctcaaccatccagc +cccgctgggccaaag-------------------------------------gctcccgtgcgtaagccgcc +agtgccacc--------------------------------------atccccgcgcacccgccgcc----- +-------------------ttctttacacctatccggatggggcaaaggtgtatgcagggtcactgtttgag +tctgactgtgattggctggttaatgcgtcgaatcccggccatcgtcctgggggcggcctttgccatgccttc +taccaacgctatcccgagtctt------tccacccaactgagtttatcatgcgcgacgg---ccttgccgcg +tacaccttaactccccggcctattattcatgcagtggctcctgactacagggttgagcataacccaaagagg +cttgaggcagcataccgagagacttgctctcgccgcggtaccgccgcctacccactcctcggctcgggcata +taccaagtccccgttagcctcagctttgacgcttgggagcgtaaccaccgccccggggatgaactctaccta +accgacctcgccgctacc-------------------------------------------------tggtt +cgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------gccggccctcacaataactgaggatgcagc +cc------------gtacagccaacctcgcactggagatcg------------atgctgctacggaggtcgg +ccgggcttgt---gccggctgtgcagttagtcctggggttgtgcattatcagtttactgctggggtcccagg +ttcggggaagtcgcgwtcyatacagcagggggatgtygaygtagtggttgtccccactcgggagctccggaa +cagttggcgtcgccggggtttcgcggcttttacacctcatacggcggcccgtgtcaccacgggccgtcgtgt +tgtgattgatgaggccccatcccttccaccgcatttgttgctactacacatgcagcgggcctcgtcggtcca +tcttctcggcgacccaaaccagatccctgccatagacttcgagcatgccggcctggtccccgcaatacgccc +tgagcttgcgcccaccagttggtggcatgtcacccatcgctgccccgctgacgtgtgcgagcttatacgcgg +ggcttatcctaaaattcaaaccactagccgcgtgctgcggtctttattctggaatgag------cctgccat +tggccaaaagttagttttcacccaggccgctaaggctgccaaccccggtgcgattacagtccacgaggccca +gggcgccactttcacggagactacaatcatagccacggctgatgctagggggctcatccaatcttctcgagc +ccatgccatagtcgcacttacccgccacacagagaagtgcgttattcttgatgcccccggcttgttacgtga +ggtcggtatatcggatgtgattgtcaacaatttt------------------------------ttcctcgc +cggcg--gggaggtgggtcaccatcgcccctctgtgatacctcgcggcaatcctgrycagaaycttgmgac- +-----aytrcaggccttyccrccttcytgccagattagtgcytaccaycarctagctgaggaaytkggccac +mgmccrgctccygtagccgctgtcttgcccccttgccctgaacttgagcagggcttgttatatatgcctcag +gagcttacggtgtctgatagcgtgctggtctttgaactcacggacatagtccattgccggatggccgccccy +agccagcggaaggccgtcctatcgacgctcgtaggtaggtatggccgtcggacgaagctgtatgaagcagct +cactctgacgtccgtgagtccctggctagattcatccccaccattgggcccgttcaggctactacgtgtgag +ttatatgagctggttgaggccatggtggagaaaggtcaggatggctccgccgtgcttgagctcgacctctgt +aatcgtgatgtatcgcgcatcacatttttccagaaagattgtaacaaattcaccacaggggagaccattgcc +catggtaaggtcggccagggcatctcggcttggagtaagaccttctgtgccctgtttggtccgtggtttcgt +gctattgagaaagaaatactagccctgctcccgcctaatattttctacggtgacgcatacgaggagtctgtg +ttcgccgccgctgtgtcaggggcrggttcaagcatg---gtatttgagaatgatttttcagagtttgatagc +acccaaaataacttctccct------------------tggcctcgagtgtgtagtcatggaggaatgtggc +atgccccagtggctaatccggttgtaccatttggtccggtcggcctggatcctacaggcgccgaaggagtct +cttaagggattttggaagaagcattctggtgagcccggcaccctcctctggaacaccgtttggaatatggcg +atcatagcacactgctatgaatttcgtgatttaagggttgccgctttcaagggagatgattccgtggtcctc +tgtagcgactaccgtcagagccgcaatgcagcggccctgattgcaggttgtgggctcaaactgaaggttgat +tatcgccccattgggttgtatgctggtgtggtggtggcccctggcctggggacgctacccgatgtggtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggctgagcagttgcgcctagctgtt +tgtgactttcttcgagggttaacgaatgttgcgcaggtatgtgtcgatgttgtatcccgag-------ttta +cggagttagtcctgggctggtacataaccttattggcatgttgcaaaccatagctgatggcaaggcccattt +tacagagactgttaaacctgtgcttgacctcacgaactctatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcctcgtgtttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcgtaccgcaatccggggctggagctcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgcgatcagtccca----------- +------gcgcccctccgctgtcccacgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgccgtatcacctgctcctgatacagctcctgtacctgatgttgactcgcgtggcgctatactgcgacgcca +gtacaatttatccacatccccgctcacatcatctgttgcttcgggtactaacctggttctttacgctgcccc +gctraaccctttgctgccccttcaggayggcaccaacactcacatcatggccaccgaggcgtctaattatgc +ccagtatcgggttgtccgagctacaatccgttacaggccattggtgccaaatgctgtcggcggctatgcaat +atccatctcattctggcctcagacgactactacccccacgtctgttgatatgaactctatcacttccactga +tgttaggattctagttcagcccggcattgcttctgagttggttatccctagtgagcgcctccattatcgtaa +tcagggctggcgctctgtggagacctcgggtgtggctgaagaggaggctacttctggtttggtaatgctttg +tatccatggctctcctgttaattcttacaccaataccccctataccggggcgcttggacttcttgatttcgc +tttagagcttgagtttaggaayytgacacccgggaacaccaacacccgtgtatcccggtatacaagcacagc +ccgtcatcggctgcgccgcggtgctgatggcaccgccgaacttaccaccacagcagccacgcgcttcatgaa +ggacctgcacttca---ccggtacgaat---ggggtcggtgaggtgggtcgtggtattgctctcacactctt +taatcttgctgacacgcttctcggtggtttgccgacagaattaatttcgtcggctggggggcagttattcta +ctcccgccccgtcgtctcagccaatggcgagccgactgtcaagttatatacatctgtagagaatgcgcagca +ggataaagggattgctatcccacatgacatagatttgggtgactcccgtgtggtcatccaggattatgacaa +ccagcatgagcaggatcgacccaccccctcgcctgccccttctcgccctttttcggttcttcgcgctaatga +tgttctatggctttc-----------------------------tcttactgccgccgagtacgac------ +cagactacatatgggtcgtccactaacccgatgtatgtctcggatactgtcacatttgt---taatgtggct +acaggagctcaggctgttgcccgttccctcgactggtccaaagttactctggacggccgccctcttactact +at-----ccagcagtactccaaaacattttatgttc-tcccgcttcgcgggaagttatccttttgggaggcc +gggacgactaag--gccggctacccctataattacaacacaactgctagtgatcagattctgatcgaaaatg +cggctggtcat------cgtgttgccat-ttccacgtataccaccagcttggg--------------cgctg +gccctgtgtctgtttc-tgcagtcggtgttttagccccacattcggctcttgcagtccttgaagacactatt +gact---------accctgcccgtg----cccacacttttgatgatttctgcccggagtgccgcgctc---t +tggtttgcaggggtgtgccttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagttttaatcaa-tt----t--cctt---t------gt +gccc-cct--------tc-atag-ctttt----gc-tt---t----------------attt-c-------- +ttttttct----gcg---------------gtttctcgctccccg---------------------gaaa-- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>KU176132.1/17213/1-7213 |Hepeviridae isolate TLSS, complete genome +--------------------------------------------------------------ggtcgatgc- +---catggaggcccatcagtttatcaaggctcctggcatcactactgccattgag---caagctgctctggc +tgcggccaattctgccttggcgaatgctgtggtggttcggccgtttttatctcgtttacaggctgagattct +tattaacttgatgcaaccccgacagttggtctttcgacctgaggtgctctggaaccatcctatccaacgtgt +tatacacaatgaattggagcagta---ctgccgggccc-gggccggtcgctgtctggaaattggagcccatc +caaggtcaatcaatgataatcctaatgttctgcatcggtgctttttacgaccggtcgggagggatgtccagc +gctggtattccgcccccacccgtggccctgcggccaactgccgccggtctgcgctgcgtggcctcccccctg +tcgaccgcacctattgttttgatggattttcccgttgtgctttcgctgcagagactggtgtggccctctatt +ctctgcatgatctttggccggctgatgtcgcggaggccatggcccgacatgggatgacacgtttgtatgccg +cactacacctc-cccccagaggtactgctaccaccaggcacttaccacacaacctcgtatcttttgatccac +gacggtgaccgcgccgttgtaacttatgagggtgatactagtgcgggctataaccatgatgtctctatactt +cgtgcgtggatccgcacgaccaaaatagttggtgaccacccgttggttatagaacgagtgcgggccattggt +tgtcattttgtgttgctgctcaccgcggcccctgagccgtcacctatgccatacgtcccgtaccctcggtca +acagaggtgtacgttcgttctatatttggccctggt---------ggttccccgtctctattcccatcagct +t----------gctccaccaaatcca-catttcatgccgtcccggttcatatctgggaccggctcatgctct +ttggcgccaccctggatgaccaggcgttttgctgctcacggcttatgacatacctccgtgggattagctata +aggttactgttggtgcccttgttgctaatgaggggtggaatgcctctgaagatgccctcaccgctgttatca +ctgcagcgtatttgaccatctgccaccagcgttacctccgcacacaagctatatctaagggcatgcgccggc +tggaggttgaacacgctcagaaattcatcacaagactttacagctggctatttgagaaatc---------tg +gccgtgattacatccccggccgtcaacttcaattttatgcacagtgccgccgttggttatctgcgggtttcc +atcttgacccgcgggtgctcgttttcgatgagtcagtgccttgt---cgctgtaggacgttccttaagaa-- +----agtcgctggcagattctgttgctttatgaagtggttggggcagga------atgcacctgcttcttag +----------------agccggctgagggtctggttggtgatcatggt--------catgacaatgaagcct +atgagggctcagaggttgatcaggccgagcctgcactccttgatgtttctgggacatacgctgttcatgggc +gccagcttgaggccctgtacagggcacttaatatccctcatgatattgccgcccgggcatctcgtttaacgg +ccaccgttgagcttgtcgcaggcccagaccgtttggagtgccgtactgtattagggaacaagactttcagga +caacggtggtcgatggcgctcatcttgaagcaaatggtcc------------------------cgagcagt +atgttctttcatttgacgcctcccgtcagtctatgggggccgggtcgcatagtctcacctacgagctaactc +ccactggcttgcaggtgaagatttcgtcc-------aacggtctagactgtaccgcgacgtttcct---ccg +ggtggtgctcccagcgccgcaccaggcgaggtagccgccttttgtagcgccctttataggtataataggttt +acccagaggcactcgctgacaggcggcttgtggctgcatcccgaggggctgttgggcattttcccccctttt +tcgcccgggcatctttgggagtccgctaaccctttctgtggagagagtactttatatacccggacttggtct +acatcaggtttctctagtgacttctccccccccgaggcggctgcccctgcgccggttgctgcctt----gga +gccacccc---accctacaccccctgctagtgatat-----------------ctgggtgct---------- +---------gccgccgcct----tctgaagaac--------------accagattgatgcggtgcctgttcc +ccccg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcctgctcagccgcctagc +cctgttgagcctaga-------------------------------------ggtcccgtgcgtaagccgcc +gccaccgcc--------------------------------------accgtctcgcacccgtcgcc----- +-------------------tcctttatacctaccctgacggcgccaaggtgtacgyagggtcactgtttgag +tctagctgtgactggctggttaacgcatcaaatcctggccaccgccctggaggtgggctgtgccatgctttc +tatcaacgctaccccgagtcgt------tccatccgactgagtttatcatgcgtgacgg---tctcgccgcg +tacaccttgacccctcgccctattatccatgcggtggctcctgactatagggtcgagcggaacccaaagagg +cttgaggcggcataccgggagacctgttcccgccgcggtaccgctgcctacccactcctaggctcgggtatt +tatcaggtccctatcagcctaagttttgatgcctgggagcgtaaccaccgccctggggacgagctttacttg +actgaccccgccgctacc-------------------------------------------------tggtt +tgaggctaataagccaacaca--------------------------------------------------- +------------------------------------------gccggcccttactataaccgaggatacagc +tc------------gcacggccaacttggcactggagatcg------------atgccgccacggaagttgg +ccgtgcttgt---gctggctgcacagttagccccggggttgtacactaccagtttaccgctggcgtccctgg +ctcggggaagtctaggtccatacagcagggggatgttgatgtggttgttgttcccacccgagagcttcgcaa +tagctggcgccgccggggctttgcggcctttacaccccatacggcggcccgtgtgactctgggccgccgtgt +tgttattgatgaggccccgtccctcccaccacatttgctgttgcttcatatgcagcgggcctcgtcggtcca +tcttcttggcgacccgaatcagatccctgctatagactttgagcatgccggcctggtccccgcaatacgtcc +tgagcttgcacccaccagctggtggcatgtcacacaccgttgccccgctgatgtgtgtgagctcatccgcgg +ggcctacccgaagatccagaccacaagccgtgtgttgcggtctctattctggaatgag------cccgctac +cgggcaaaagttagttttcacgcaggccgccaaggctgctaaccctggtgcgattacagtccacgaggccca +gggagccacatttacagagaccacaattatagctacggctgacgccaggggccttattcagtcgtctagggc +ccatgctatagtcgcactcacccgccacacagagaagtgcgttatattggatgcccccggcctgttgcgtga +agttggcatatctgacataattgttaacaatttc------------------------------ttccttgc +cggtg--gggaggtgggccatcatcgcccctctgtgatacctcgtggcagccctggtcagaaccttgagac- +-----actgcaggccttcccgccttcttgccagattagtgcttaccatcaactagctgaggaattgggccac +cgaccggctcctgtcgctgcggttttgcccccttgccctgaacttgagcagggtctgttgtacatgccgcag +gagcttacagtgtccgatagcgtgctggtcttcgaactcacggatatagtccattgccgcatggccgcccct +agccagcggaaggctgtcctatcgacactcgtggggaggtatggtcgtagaactaagctgtatgaggctgcg +cactctgacgtccgtgagtccttagccaggttcatccccactatcgggcctgtccgggccaccacatgcgag +ctgtatgagttggtcgaggccatggtagagaagggccaagacggttccgccgtgttggagctcgacctgtgc +aaccgcgacgtctcgcgtattacattcttccaaaaagactgtaataagttcaccaccggcgagaccatcgct +catggtaaggtcggacagggtatttcagcttggagtaagaccttttgcgccctgtttggcccttggttccgt +gccattgagaaagaaatactggccctactcccacctaatattttctatggcgacgcctacgaggagtctgtg +ttcgctgcagccgtctctggggcggggacatgcatg---gtatttgagaatgatttctcggagtttgacagt +actcagaataatttctccct------------------cggccttgagtgtgtagtcatggaggaatgtggc +atgcctcaatggttaatccggctgtaccatctggttaggtccgcctggatcttacaggcgccgaaggagtcc +cttaaaggcttttggaagaagcactctggtgagcccggtaccctgctttggaacaccatctggaatatggcg +atcatagcacactgctatgaatttcgcgatttcagagtcgctgccttcaagggcgatgactcagtggtcctt +tgtagcgattaccgccagagccgcaacgctgcggccctgattgcaggctgcgggcttaaattaaaggttgat +taccgtcctatcgggttgtatgctggtgtggtggtggcccccggcttggggacactgcccgatgtagtgcgc +tttgctggccggctgtctgagaagaactggggtcctggcccggagcgtgccgagcagctgcgtcttgcggtt +tgtgattttcttcgagggctgacgaatgttgcgcaggtctgtgttgatgttgtatcccgtg-------ttta +cggagttagccctgggctggtacataaccttattggcatgttgcagaccattgctgatggcaaggcccactt +cacagagactgtcaaacccgtactcgaccttacaaactccataatacatcgggtagaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gctgttgttcctcgtgtttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgactggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgccgatgtcgtttcacaacccggggctggagctcgccctc +gacagccgccccg---------------ccccctcggttccacttggcgtgaccagtccca----------- +------gcgcccctccgctgcaccccgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgctgtgtcaccggcccccgacacagcacctgtgcctgacgtcgattctcgcggcgctatactgcgacgaca +gtataatctgtctacatccccgctcacgtcatccgttgcttcgggcactaatctggttctttatgctgcccc +gctgaaccctcttttaccccttcaggacggcaccaatacacatatcatggctaccgaggcgtctaactatgc +ccagtaccgggttgtccgggccacgatccgttatcgcccgttggtacctaatgccgtcggcggctatgcaat +ttctatttcgttttggcctcaaaccactaccacccccacgtctgtggatatgaattctattacctctaccga +tgttaggattctggttcagcctggtattgcttccgaactcgtcattcctagcgagcgtctccattaccgtaa +ccagggctggcgctctgttgaaacatcgggcgtggccgaggaggaagctacctctggcttggttatgctttg +cattcatggctcccctgttaattcctacactaacaccccttacactggggcgcttgggctccttgactttgc +actagaacttgagtttaggaatttgacacccgggaataccaacacccgtgtatcccggtacacaagtacagc +ccgccaccggctgcgccgcggtgccgacggcaccgctgagcttactactacggcagccacgcgcttcatgaa +ggacctgcatttta---ccggcacgaac---ggggttggtgaggtgggtcgtgggattgctttgacactgtt +caatcttgctgatacacttctcggtggtttgccgacagaattaatttcgtcggccgggggtcaactattcta +ctcccgccctgtcgtctcagccaatggcgagccgactgtcaagttatatacatctgttgagaatgcacagca +ggataaggggatagctattccacatgatatagatctgggcgactctcgtgtggtgattcaggattatgataa +tcagcacgagcaggaccggcccaccccttcacccgccccgtctcgtcctttctcggtcctccgcgctaatga +tgttttgtggctctc-----------------------------tcttaccgctgctgagtatgac------ +cagactacatatgggtcgtccaccaacccgatgtatgtctcagacactgttacatttgt---caatgtggcc +acaggggctcaggctgtcgcccgttctcttgattggtctaaagttaccctggacggccgccctctcactacc +at-----ccagcagtactctaagacattttatgtcc-tcccacttcgcgggaagttatccttttgggaggct +ggcacaacaaaa--gccggttacccttataattatgacacaactgctagtgaccagattctgattgagaatg +cggctggccat------cgtgtcgctat-atctacttatactaccagcttggg--------------cgccg +gccctgtgtcggtctc-tgcggtcggtgtactagccccacactcggcccttgctattcttgaagacactgtt +gatt---------atccggcccgtg----ctcacacttttgatgacttctgtccggaatgccgtgccc---t +gggtctgcaggggtgtgcttttcaatc--------tactatcgctgagctccagcgcct------------- +--------taaaatgaaggtaggcaaaacccgggagttttaattaa-tt--------ctt-ctt------gt +gccc-cct--------tc-acgg-tcctc----gc-tt--------------------tatt-t-------c +tttcttct----g-----------------sttccgcgccccccg---------------------gaaaaa +aa---------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>KX387867.1/17212/1-7212 |Hepeviridae strain 62XJ, complete genome +---------------------------------------tatg-------------t-----ggtcgatgc- +---catggaggcccatcagtttatcaaggctcctggcatcacaaccgccattgag---caggctgctctagc +ggctgctaattctgccttggcgaatgctgtggtggttcggccgttcctctcccgcacccagacagatatact +gattaatcttatgcaaccccgacagcttgtctttcgtcctgaggtcttttggaaccatcccatccagcgtgt +tattcacaatgaacttgagcagta---ttgccgtgccc-gtgccggccgctgcttagaggtcggtgcccacc +cgcgttccattaatgatagtcctaatgttcttcaccggtgttttcttcggcctgttgggcgtgatgtgcagc +gctggtatacagcgcccacacgcggtccagcggctaattgtcgccgctcagctctccgtggtctcccacctg +tagatcgtacctattgctttgatggtttttccggctgtacttttgctgctgaaacgggggttgccttatatt +cattgcatgatctatggcctgctgatgttgcggaggctatggcccgtcatggcatgtcgcgtctctacgctg +tcctacactta-ccccccgaggttcttctcccgcctggcacctatcacacgacttcttaccttttgattcat +gatggtacccgtgccgttgttacatacgagggtgatactagtgccggttataaccatgatgtcgccatctta +cgtgcctggatccgcaccaccaaaattactggtgaccatccgttggtcattgagagggtccgtgcgattggt +tgccacttcgtcctcctcctgactgctgcacctgaaccttctcctatgccgtatgttccttacccccgctct +acagaggtttatgtccggtctatctttggaccggga---------ggttcaccatctcttttcccctcgtcc +t----------gtaagagtaagtcta-cattccacgctgtccctgtccatatttgggaccgacttatgctct +ttggtgccactctggatgaccaggcgttctgctgctcccggcttatgacctatttacgtggcattagctata +aggtcaccgttggcgcgcttgttgctaatgagggttggagtgcatccgaggacgccctgaccgctgttatca +ccgctgcttacctcaccatatgtcatcagcgctatcttcgtactcaggcaatctcaaaaggtatgcgcaggc +ttgaggttgagcacgcccagaagtttatcacccggctttatagctggttgtttgaaaagtc---------cg +gccgtgattacatccccggccgtcaggtcgagttctatgcccagtgccggcgctggctgtctgcggggttcc +acctcgatccgcgtgtgcttgtctttgacgagtctgcgccatgt---cggtgtcgaagcctgcttcgtcg-- +----ggctgctaatagtttctgctgttttatgcgctggctcgggcaaga------gtgcaattgttttttgg +----------------agcccattgagggacacgttggcgacgagggc--------cacgataatgaggcct +atgaagggtctgaggtcgattcggcagaccttgcggagcctgacccgtcgggtacatttgccgtccgcgggg +atcagctcctgccccttttccaggcattaaatcttccgtctgatttggtcgcccgtgcctcccggcttactg +ccactgttgagcttacagttgattccaaccggctagactgcaagaccaccttaggcaataaagttttccgca +ccacctttatcgatggagcacgtctagaagccaatggtcc------------------------tgagcagt +atgtactctcgtttgatgcaagcaaaaggtctatgtcggccggcccctacagtctttcatatgagtttaact +cagagggtctccaggtttctttcgtactc-------aatgggctgagttctgtaattgttttccct---cct +ggctgtgccccaagtcctccgtctgccgaagtgacggcattctgctcagctttgtataggtttaaccgatgt +gctcaaaggcattccctgaccggtggtgtttggtttcacccggaggggctactcggtgtgttcaccccgttt +tccccgggccatgtgtgggactctaacaacccgttttgtggtgagagcaccctttatacccgtacttggtcc +acctcgggtttttctagtaatttctcaccacctgaggcggtgttagctaaacctagtccggttgt----ttg +tgaacctgatggcccatctttaccttccactaccac------------------------------------ +-tcagccg-gctggcgccc----ccaccgaggc------cgtat---ctggtgccgcctgtccgtcgccggc +cc---------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------attccgggtctgccggtgttgctgag +accacctctgccagg-------------------------------------cctccaaagccaacatccga +atctgggcc--------------------------------------tactatgcgtggtcgccggc----- +-------------------ttctgcatgtatacccggacgggtccaaggtctattctggttctcttttcgaa +tctgactgtacctggcttgtgaatgcatccaatcccggccaccgcccaggcggcggtttgtgtcacgccttt +tatcagcggtaccctgagtctt------ttgaccacaccaggttcatcatgcgcgatgg---ccttgccgct +tatactctggcgccgcgcccgattatccatgctgtcgcgcctgactaccgggttgaacataacccgaagcgg +ctggaagcggcatatcgtgagacatgctcccgccgcggcacagccgcgtacccgctgctgggctccggcatt +taccaagtgcccgttggacctagctttgatgcatgggagcgtaaccatcgcccaggtgatgaattgtacctc +tctggcccagccgttgct-------------------------------------------------tggtt +tgaggcgaacaagcccaccca--------------------------------------------------- +------------------------------------------gccagctttggtgattactgaggatgttgc +cc------------gtacggcgaatttagccctccaaattg------------actccaccaccgaggtcgg +caaggcttgc---acgggtgctgttgttaatcccggcgtcatccgctaccagtttaccgccggtgtccctgg +ttctggtaagtctcggtccattcagcagggtgatgttgacgttgttgtggttccaactcgtgagctacgtaa +tagttggcggcgcaggggtttcgcggctttcacaccacacactgcagcccgtgtcacccgcggccgccgggt +tgtgattgatgaggccccctcccttccgccgcatctattgcttctgcatatgcaacgggctgcatctgtgca +tttacttggcgacccaaatcagatacctgcaattgattttgagaacgccggtctagtacctgcaattcgccc +tgatctggtccccactagctggtggcatgttacctatcgctgccccgccgatgtttgtgagctcattcgtgg +tgcttatcccaaaattcagactgcgagtcgggtcgttcggtccttattctggaacgag------cccgctat +cggtcagaagctagtgtttacacaggctgctaaagccgctaatcctggtgctattactgtccacgaagccca +aggggccactttcagtgaaaccacaatcattgccaccgctgatgcacgaggtctgatacaatcttctcgtgc +ccatgctattgttgcactcactcgtcacactgaaaaatgtgtggtgtttgacgcccctgggcttttgcggga +gatcggtatctcagactctattgtcaataacttt------------------------------tttctggc +tggcg--gtgaagtcggtcataaccgcccatccgtcatccctcggggtacccctggtgacaatgtcgccac- +-----ccttgacgcctttcccccgtcctgccaggttagcgcctaccatcagctggccgaggagcttggccat +cgcccgtcacctgttgcggcagtgctccctccgtgtcctgatctggagcaaggtctcttgtatatgccgcag +gagcttactgtgtctgatagtgttttgatctttgagcttactgacatagtccactgccgtatggctgcccca +agccagcggaaagctgtgctctctacgcttgttggccggtatggccgccgtaccaagctctatgatgctgct +cactccgacgtccgccgttctctgagtcagtttatacctaccattggtcccgtccgggcgaccacctgcgag +ctgtatgagcttgttgaagccatggttgagaagggtcaggatggatcggctgttcttgaactcgacctctgc +agccgtgatgtctcccgtatcactttctttcagaaagactgtaataaatttacaactggtgaaactatctct +catggtaaggttggccagggcatatctgcttggagcaagactttctgtgccttatttgggccatggttccgc +gccatagagaaggaaattttggctttacttccatccaatatattctatggtgacgcttatgatgattctgtt +ttatctgctgcagtttctagtgcgaaggactgcatg---gtgtttgagaatgatttctctgagtttgatagc +acccagaacaacttctctct------------------tggcctcgagtgcgtcttaatggaggaatgtggc +atgccgcagtggctaattcggttataccacttggtccgctcggcatggatacttcaagctcctaaggagtct +ctgaaagggttctggaagaagcattcaggggagccaggcactctgctgtggaacactgtctggaacatggcg +atcattgcacactgttatgagttccgcaacttgcaggttgctggttttaaaggtgatgactctatggtcctg +tgcagtgattatcgtcagagttgcaatgcagccgttttgattgctggttgcggacttaagctgaaggttgac +taccggccgattggtctttatgcaggtgttgttgttgcccctggtcttggtgtgttaccggatgtagttcgg +tttgctggtaggttgtctgaaaagaactggggtccggggcaggagcgcgctgagcagctccgcctcgctgtc +tgtgattttcttcgaaagcttacgaatgttgctcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccctggcttggttcataacctaattggtatgctccagactattgctgatggtaaggcccattt +tacccagtccattaaaccggtgctggacttgactaactcaataactcagaggttagaatgaataacatgtg- +----------------atctgcatggcccatggg------------tacatcatgtgcactcgggctgtatt +gttgctgttcctcttgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggttc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----cactcccctatattcat---- +--------------ccaaccaacccctttgtcgcagacatcacctcttcatccggggctgggtctcgccctc +gccagccatcccg---------------accactcggtaccgcttggcgcgaccaatccca----------- +------gcgccccgccgctcccactcgtcgccgatctgccccc---------gctggggcagcgccgttaac +tgccactgcccctgcttctggtacaacccccgtccccgatgtcgactctcgtggtgcaatcttgcgtcgtca +gtacaatctatctacgtccccgcttacttcgtcaatcgcatctgggactaatcttgttctctatgccgcccc +gcttagcccccttttaccgctccaagatggcactaacactcatattatggcgactgaggcgtccaactatgc +tcaatatcgtgttgttcgcgccacaatccgctaccgtccacttgttccaaatgctgtgggcggttatgctat +atctatttccttttggccccagactactacaacgcccacatcggtcgacatgaattccatcacgtccactga +cgttcgtattcttgtccagcctggtattgcctctgaacttgttatccccagtgagcgtctgcattaccgtaa +tcagggctggcgctctgttgaaacttctggtgtggcggaagaggaagccacatctggtcttgtcatgctttg +tatccatggctctcctgttaattcttatactaataccccttacactggtgctctcggtctgcttgattttgc +tcttgagttggagttccggaatctcactcctggtaacaccaatacccgtgtgtctcgttattctagcactgc +acaccatcgtcttaaacgcggcgctgatggcaccgccgaattgacaactacagctgctacgaggtttatgaa +agatctccacttca---ccggctctaac---gggcttggtgaagttggccgcggcatagctatgaccctttt +taatcttgctgatactctcctcgggggtttgccgacagaacttatttcgtcggcaggcgggcagttgtttta +ctcccgccctgttgtctcagccaatggcgagcctactgtcaagctttacacctctgttgagaatgcccagca +ggataagggtattgctatacctcatgatattgaccttggtgagtctcgagttgtcattcaggattatgataa +tcagcatgagcaagatcgcccaacaccgtcccctgccccctctaggcctttctctgtactacgtgctaatga +tgttctctggctttc-----------------------------tcttactgctgctgagtatgac------ +caaactacttatggctctaccaccaatcctatgtacgtgtctgatactgttacttttgt---caatgtcgct +actggggcccagggagtttctcgcaccctggactggtctaaagttacccttgatggccgccccctcactact +at-----ccatcagtactctaaaacgttctttgttc-tccctcttcgtggtaagctttcattctgggaggcc +ggcaccactaag--gctggttacccttacaattataacactaccgcctctgaccagatactcattgagaatg +ccgctggtcat------cgtgtggctat-ttctacttacactactagtcttgg--------------tgtcg +gccctgtatctatctc-ctgtgttggtgttcttgctccacattctgctttagctgttttagaagatactatt +gact---------accctgctcgtg----cccatacttttgatgacttttgccctgagtgtaattctc---t +tggcctccaaggttgtgcttttcaatc--------tactatcgctgagatacagcgtct------------- +--------taaaatgaaggttggtaaaactcgggagtcttaatcta-tt----ttgcttt----------gt +gccc-cttc----------tatg-ttgct----gt-----------------------tatt-t-------t +ctttttct----gcg----------------tttcgcgctccctg--------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>KX227751.1/17302/1-7302 |Hepeviridae isolate CHNSXrHEV, complete genome +----------------------------gcagacca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccaccagtttattaaggctcctggcatcacaaccgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggttattcggccgtttttgtcccggacacagactgagatcct +tattaaccttatgcagccccggcaactggtttttcgcccggaggttttctggaatcatcctatccaacgcgt +tatacataatgagctagagcagta---ctgccgtgctc-gtgccgggcgctgccttgaggttggagctcacc +caaggtctattaatgacaacccaaatattctgcaccggtgtttcctccggcctgtcggtagggatgttcagc +ggtggtattccgcccccacccgtggtcctgctgctaactgccgtcgctccgcactgcgcggcctccctcctg +ttgaccgtacctactgctttgacgggttctctggctgcatgtttgcagctgagaccggtattgctctttatt +ctctacatgacctgtggcctgccgacgttgcggaggcaatggcgcaccatgggatgtcacgcctgtatgctg +tactgcacctc-cctcctgaggttttgctaccaccaggcacctaccacaccacctcctaccttctgattcat +gacggcaatcgtgccgtcgtaacctatgaaggtgatactagtgctggttataaccatgatgtctccatcctt +cgcgcctggatccgcacgacaaaaatcatcggcgaacatccgctggttatagagcgcgtccgcgcgattggc +tgccactttgtgttgctgcttactgcggcccccgaaccatcgcctatgccttatgttccttatccccgttct +acagaggtatttgttcgctcaatatttggcccgggc---------ggctcaccttctctttttccgtcagct +t----------gctgtacaaaatcca-ccttccacgccgtccctgttcatatttgggataggctcatgcttt +tcggcgccacgctggacgatcaggccttctgctgttcgcggcttatgacttaccttcggggtattagttata +aagtcactgtcggcaccctcgtagccaacgagggctggaatgcctctgaggatgcccttactgcagtgatta +ccgcggcgtaccttaccatctgccaccagcgttaccttcgcacccaggcgatctctaaaggcatgcgccggc +tggaggtcgagcacgcccagaagtttattaccaggctctatagctggctttttgagaagtc---------cg +gccgtgattacatccctggccgccagctccagttttatgcgcagtgccggcgctggctttctgccggctttc +acttggaccctagagtgctcgtcttcgatgagtctgtgcactgc---cgctgtagaagcctaataaggaa-- +----tgtaacaaggaaagtttgctgcttcatgaagtggctcggccagga------gtgcacctgcttcttgg +----------------agcctgcggaaggcctgctcggtgaccaaggc--------catgacaacgaggcct +acgaggggtctgaggttgaccctgccgagcccgcccctaccgatgtgtcgggtacttacactgtccatgggc +gattgttggtagatctatataaagcactcaatgtcccgcaagatattgtagcccgggccgcccgcttgtcag +ccactgtcgagcttgccgccggcccagggcggcttgagtgccgcactattttgggcaacaagaccttccgca +ctacattcactgacggtgcccaattggaggcgaatggccc------------------------tgagcagt +acgttctttcatttgatgaagcccgccagtgtatgggtgccgggccgcatagccttgtgtatgagctcaccc +ccagtgggctgcaggttaaaatcacatct-------aatggcctagactgtatggcggtcttccca---tcc +gggagggccccgagtgctgaggctgcagaggttacggccttctgcagtgccttgtatagatacaacaggacc +atccagcggcactcgattgtcggcgggctatggttacacccggaggggctgttaggtcttttcccgcccttt +tctccaggccatttttgggaatccacgaacccgttttgcggtgagggaaccctttacaccagaacctggtct +gagtccggcttctctagtgacttttcgccacctgaggtagccgctggcgcccccccccccgttgac------ +-ctgccctatacaccggccccctccggggctgctgt-----------------tcgaggccc---------- +---------gctacccccc---------------------------------------------cccgtggc +ccccg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------------gggttgttggcccatctg-- +-ctgatacgcccggg-------------------------------------ccttctgctcataagccacc +ggggccatc--------------------------------------tctagcccgtaatcgccggc----- +-------------------ttctttacacctatccagacggcgccaaggtttattcagggtccttgtttgag +tcagattgcgactggctagttaatgcatctaatcccggccaccgtccgggcggcggcctttgtcatgccttt +taccagcgtttcccacagtctt------ttgaccatactaaatttgttatgcgggatgg---gctggccgca +tacaccttgacacctcgcccgatcattcatgcggttgcccccgattatagagttgcacataacccgaaaaga +ttggaggcagcgtatcgtgagacttgctcccgccttggcactgccgcttacccgttgctgggctcaggcatc +taccaagtccctgttggcccgagttttgacgcctgggaacgaaaccaccggcccggtgatgagctctacctc +accgagcttgcgacagct-------------------------------------------------tggtt +tgaggccaacaggccggcccggcccctcacacctacaactcatgatacagccccagctgactatcccgtggc +aggggccggccctccatcgggagccggcgccggcccggtactgcctgccctgaccataacagaggatatagc +tc------------ggacggccaatcttgccctggagattg------------attctaggactgagctagg +tcgagcctgt---gccggttgtactgttagccctggggtagtccgctatcaatttaccgcgggtgttcccgg +gtctggcaaatcaaggtctatacagcagggtgatgttgatgttgtggttgtgcctacccgtgagctccgtgg +cagttggcgtcgccgcgggtttgctgcatttacaccccactcggccgctcgtgttactagcggtcggcgtgt +tgtaatcgatgaagcaccatctctcccgccccatttgctattactgcatatgcagcgtgcttcatcagtgca +ccttcttggtgaccctaaccagatccctgcaatcgacttcgagcacgctggccttgtccccgcaatccgccc +tgagctcgctcccaccagctggtggcacgttacgcaccggtgtcccgcggatgtctgcgaacttatacgtgg +ggcgtatcccaagattcagactaccagccgtgtgctgagatctctgttctggggtgac------ccccccgt +cggccagaagttggttttcacgcaggccgcaaaagcagccaatcctggtgcgatcactgtccatgaggccca +gggggccacattcactgagaccactattattgccacggctgatgcgagaggcctcattcagtcgtcccgggc +gcatgccattgtcgcgctcacccgacacacagagaaatgtgttattttggatgccccggggctgctccgcga +ggtgggcatatcggatgtgatagttaacaacttc------------------------------tttttagc +tggcg--gtgagatcggccaccaccgcccctctgtcatacctcgcggcaacccagaccgaaatcttgacat- +-----cctccaggcctttcctccctcttgccagatcagcgccttccaccagctggctgaggagcttggccac +cggcccgcgcctgtggccgctgtcctgccgccctgccctgagctcgagcagggcctgctctacatgccgcag +gaactcacagtgtctgacagtgtcctggtctttgagttaactgatatagtccattgccgtatggctgccccc +agccagcggaaggccgtcctctctacgctcgttgggcgttacgggcgccggacgaagctatatgaggctgct +cactcggatgtgcgtgaatcactcacaaggtttatccccaccatcggccctgtgcaggccacgacgtgcgag +ctttatgagctggttgaggcgatggtggagaaaggtcaggacgggtcagctgtgctcgagcttgacctttgt +agccgagatgtgtcccgaataaccttctttcagaaagactgtaataagttcacaaccggcgagacgattgcc +cacggcaaagtaggccagggaatatcagcttggagcaagaccttttgcgccttattcggcccctggttccgg +gctatagaaaaacagatactagccctgctcccgcctaacatcttttatggtgatgcttacgaggattccgtg +ttctctgctgctgtcaccggtgcggggtcgagcatg---gtatttgagaatgatttttcggagtttgacagc +acccagaataacttttcgct------------------cggccttgaatgtgtgattatggaagagtgtggc +atgccccaatggttagttagattgtaccatttggtgcgatctgcctggatcctacaagccccaaaggaatct +ctaaaaggcttttggaagaagcactccggcgagcccggcacgttactctggaataccatttggaacatggcg +gttatagctcactgctacgagttccgcgatttcagggttgccgcgtttaaaggggacgactcggtggttctt +tgtagcgattaccgccagagtcgtttcgcggcggcactgattgcgggctgcgggctcaagcttaaagtcgac +taccgccctgtcgggctctatgccggagttgtggttgcccctggtctcggaacgttgcccgatgtcgtccgg +ttcgccgggcggctgtcagaaaagaactggggccccggccctgaaagggcggagcagttacgcttagctgtc +tgtgactttttgagaaagttgacgaatgttgctcaggtttgtgttgatgttgtgtctcgtg-------tcta +tggggtgagccctgggcttgtacataaccttatcggcatgctgcaaacaattgccgacggcaaggctcacta +tactgaaactgtgaagcctgtgttggaccttacaaattctattgtgcagaggttggaatgaataacatgtc- +t----------------tctgcatcgctcatggg------------atcgccatgcgccttggggctgtttt +gttgctgctcctcgtgtttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccagtcagccgactggcc------------gccgtcgtgggcg-gcgcggcggcggttc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctattttcat---- +--------------ccaaccaaccccttcgccgctgacgttgactcacatcccgggtctggagccaaacccc +ggcagccagcccg---------------cccccttggcacctcttggcgcgacctgtccca----------- +------gcgcccccccgctgcctcgcgtcgtcgatctacccca---------actggggctgcgccgctgac +tgccgtctcacccgcacctgatacggcgcccgtcccagatgtcgattctcgcggggctattctgcgccgtca +gtataatctttcgacttcgcctctaacctcaactgttgcctcaggtactaatcttgttctgtatgctgcgcc +gcttaaccccctcctgcccctccaggatggcactaatactcacatcatggcgactgaggcgtctaattatgc +ccaataccgagttgtccgagctacaattcgttaccgccctttggtgcctaatgcagttggcggctacgcaat +ttctatctctttctggccccagaccactaccacccccacctctgtcgatatgaattcaattacttcaactga +tgttaggattcttgttcaacctggcttggcttccgaactcgttataccaagtgagcgtctccactatcgtaa +ccaaggttggcgctctgtggagacttccggtgtggctgaggaggaggccacttctgggcttgtcatgctttg +cattcatggttcccccgttaattcatacaccaataccccctatacaggggccttagggcttcttgattttgc +gcttgagattgaatttcggaatctgaccccagggaacactaatacacgtgtctcccgttataccagcactgc +ccgccatcgcctgcgccgtggcgccgacgggaccgccgaactcacaactacggcggccacacggtttatgaa +agatctccatttca---ccgggatgaac---ggggtcggtgagatcggtcgtggcatagccctgacgctgtt +caacttagctgatacacttcttggtggtttgccgacagaattaatttcgtcggccgggggtcaggtattcta +ctcccgccctgtcgtctcagccaatggcgagccgactgtcaagttatatacatcagttgagaatgcacagca +ggacaaggggattgcaatacctcatgatattgacctaggtgattcccgtgttgttatccaggactatgataa +tcaacatgagcaagaccggcctaccccgtcaccggccccctctcgtcctttttccgttctacgcgctaacga +tgtgctgtggctttc-----------------------------actgaccgctgctgagtatgat------ +cagactacatatggttcgtcgactaatcctatgtatgtctcagacactgtgacatttgt---caatgtggca +acaggtgctcaggccgtcgcccgctctcttgactggtctaaagtaactttggacgggcggccgcttaccacc +at-----ccagcagcattctaaaacattttatgttc-ttcccctccgtggcaagctttccttttgggaggct +ggtaccactaag--gctggctacccctacaactataacaccacagctagcgatcaaatcctgatagagaatg +cggctgaccat------cgtgttgctgt-ctcaacttataccacgagcttggg--------------tgctg +gccctgtgtctatttc-tgcagttggtgtgctcgctccacattctgtcttagctgttcttgaggatactgtt +gatt---------accccgcccgtg----ctcatacctttgatgatttctgccctgagtgccgtattc---t +tggcctgcagggttgtgcttttcagtc--------tactgtcgctgagcttcagcgtct------------- +--------taagatgaaggtgggtaaaacccgggagtcttaattaa-tt----ct-tatt----------gt +gcct-tcct-------tc-tatg-ttgac---tgt-tt--------------------tatt-t-------c +ttatttct----gcg----------------tttcgcgctccctg---------------------ggaaaa +aaaaaaa---------------aaaaaaaaa----------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>KP294371.1/17267/1-7267 |Hepatitis E virus strain MWP_2010, complete genome +agccttaataaactgatgggcctccaggcag-acca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcatcactactgccattgag---caagctgctctggc +tgcggccaattctgccttggcgaatgctgtggtagtccggccgtttctttcccgtgtgcagactgagattct +tattaacctgatgcaaccccggcagctggttttccgtcctgaggtgctttggaaccatcctatccaacgggt +tattcataatgagttagaacagta---ctgccgggccc-gggccggccgttgcctagaggttggggcccacc +caagatctattaatgacaaccccaatgttttgcaccggtgttttctacgaccagtcggtagggatgtccagc +gttggtattccgcccccacccgcggtcctgctgctaattgccgccgctccgctttgcgcggtctcccccctg +tcgaccgtagctattgttttgatgggttctcccgctgtgcttttgcagcagagactggtgtggccctctact +cactgcatgatctctggccggctgatgttgcagaggccatggcccgacatgggatgacacgcttgtacgctg +cactacatctc-ccccctgaggtgctcttaccgcctggtacctaccacacaacttcataccttttgattcac +gacggcgaccgtgctgttgtgacttatgagggtgacactagtgctggttataaccatgatgtttccatactc +cgagcatggatccgtacaactaagatagttggtgaccacccattggtgatagagcgtgtacgagctattggc +tgccactttgtgctgctgctcaccgcagcccctgagccgtcaccaatgccttacgttccataccctcggtca +acagaggtgtatgtccgctccatattcggccctggt---------gggtccccgtccctgtttccgtcagct +t----------gctctacaaaatcta-catttcatgccgtcccggttcatatctgggaccggctcatgctct +ttggcgccaccctggacgatcaggcgttctgctgctcgcggcttatgacttatctccgcgggattagttaca +aggtcacagttggcaccctcgttgctaacgaggggtggaacgcctctgaagatgctctcaccgctgtcatta +ctgcggcgtacctgaccatctgccatcagcgctatctccgcactcaggcaatatccaagggcatgcgccggt +tggaggtcgagcatgctcagaaattcattacaaggctctatagctggctgtttgagaagtc---------cg +gccgtgattatatccccggccgccagctccagttttatgcgcagtgccgccgttggctgtcggcgggttttc +atcttgaccctagggtgcttgtttttgatgagtcagtaccttgc---cgttgcaggacatttcttaagaa-- +----agttgcaggtaaattctgctgttttatgaagtggttgggacagga------gtgtacctgcttcctgg +----------------agcctgcagagggtctggtcggcgaccatggt--------catgataatgaagctt +atgagggctctgaggtcgaccaggctgagcccgctcatcttgatgtttctgggacttattctgtccacgggc +gccagctcgaagccctgtatagggcacttaacatcccacatgatattgccgctcgagcgtcccgcttaactg +ctactgtcgagctcgtcgcaggcccggatcgtctagagtgccgcactgtgcttgggaacaagactttccgaa +caacggtggtcgatggcgcccatctcgaggctaatggccc------------------------cgagcagt +atgtcctctcgtttgacgctacccgccagtctatgggggctgggccgcacaaccttacttatgagcttactc +cagctggcctgcaagtcaagatatcatct-------aatggtttagactgtactgcaacattccct---ccg +ggcggcgcccctagcgccgcgccgggagaggttgctgctttctgcagcgccctttataggtacaataggttc +actcagcggcattcgctgacaggcggcttgtggctacatcctgaaggattgttgggcatctttcccccgttt +tctcctgggcacctctgggagtctgccaacccgttctgtggggagggaactttgtatactcgaacttggtcc +acatctggtttttctagtgattttagccctccggaggcggctgtccctgtaccggccgtcgcctc----ggg +actattcc---gccccacgccccctgctagtgatat-----------------ctgggtatt---------- +---------gccgccgcct----tctgaggaac--------------cccaggttgacgcagtgcccgcttt +ccccg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cctctgagcctgtccagccccctaac +cctgttaagcctcag-------------------------------------accctcgcgcgtaagccgcc +gacaccgcc--------------------------------------gctccatcgtacccgccgcc----- +-------------------tcctttacacctatccggacggtgccaaggtgtatgcagggtcattgtttgag +tcggactgtgactggctggtcaatgcgtcaaatcccggccaccgccctgggggcggcctttgccatgccttt +taccagcgctatcccgagtcat------tttatccaaccgagttcattatgcgagatgg---ccttgccgca +tacactctgacccctcggcctattatccatgcagtggcccccgattatagggtcgagcagaaccctaagagg +ctcgaggcggcttaccgggagacctgctctcgccgcggtaccgccgcttacccgctcttgggctctggtatt +tatcaagttcctgttggcctcagttttgacgcttgggagcgaaaccatcgtcccggggatgagctctacctg +actgaccccgcagctaac-------------------------------------------------tggtt +cgaggctaataagccggcaca--------------------------------------------------- +------------------------------------------gccggctcttacaataactgaggacacggc +cc------------gcacggccaacttagcattggaggttg------------atgctgctacagaggtagg +ccgtgcttgc---gccggctgcacggttagccccggggttgtgcactaccaattcaccgctggagtcccagg +ctcgggaaaatcaagatctatacagcagggggatgttgatgtggtggttgttcccactcgagagctccgtaa +tagttggcgccgtaggggctttgcagccttcacacctcatacggcggcccgtgtaactacaggtcgtcgtgt +tgtgattgacgaggccccatcccttccaccgcacctgttgctgctgcatatgcagcgggcctcgtcggtcca +tcttctcggcgacccaaaccagattcctgctatagacttcgagcatgctggtttggtccccgcaattcgccc +tgagcttgcgcctactagctggtggcatgtcacgcaccgctgtcctgctgatgtatgtgagctcatacgtgg +ggcctatccgaagatacagaccactagccgtgtcctgcgatctctattttggaacgag------cccgctat +tggccagaaactagtttttacgcaggccgctaaggctgctaaccctggcgcaattacagtccatgaggccca +gggtgctactttcacggagaccacaattatagccacggctgatgctaggggccttattcaatcctcccgggc +ccatgctattgtcgcacttactcgccatacggagaagtgcgtcattcttgatgctcccggcctgctccgtga +agttggtatatcggatataattgtcaataatttc------------------------------ttccttgc +cggtg--gggaggtgggccaccaccgcccctccgtgataccccgtggtagccctgtccagaatcttgagac- +-----attacaggcctttccgccttcctgccagattagtgcttaccatcagctagctgaagagctaggccat +cgtccagcccctgtcgcagctgtcctccctccctgccctgagctcgagcagggtttgttatatatgccacag +gaacttaccgcgtccgacagcgtgctggtttttgaactcacggatatagtccattgccgcatggctgctcct +agccagcggaaggccgtcctatccacacttgtggggaggtatggtcgtaggacgaagctgtatgaggcagcc +cattccaatgtccgtgagtctctagctaggttcatccccaccattgggcccgtccaagctaccacatgtgaa +ttatatgagttggttgaggctatggtagagaagggtcaggacggctccgctgtgcttgaactcgacctctgt +aatcgtgacgtgtcgcgtattacatttttccagaaagactgtaataagtttactactggagagaccatcgct +catggcaaggtcggccagggcatctctgcctggagtaagaccttttgtgccttgtttggcccgtggttccgt +gctattgaaaaagaaattttggccctgctcccgtctaatatcttctatggtgacgcatatgaggagtctgta +tttgctgctgctgtgtctggggcagggtcatgcatg---gtatttgagaatgatttttcagagtttgatagc +actcagaataatttctccct------------------cggccttgagtgtgtaatcatggaggaatgtggc +atgcctcaatggctaatccgattgtaccatctggtccggtcggcctggattttgcaggcgccgaaggagtcc +cttaaaggtttctggaagaagcattctggtgagcccggtaccctcctttggaataccgtctggagtatggcg +atcatagcacactgctatgagtttcgcgattttagggttgccgctttcaagggtgatgattcggtggtcctt +tgtagtgactaccgccagagtcgtaatgcggcgaccttgattgcaggttgtgggctcaaactgaaggttgac +tatcgtcctatcgggctgtatgccggagtggtggtggcccctggcttggggacactacccgatgtggtgcgt +tttgctggccggctgtctgagaagaactggggccctgggctagagcgggctgagcagctgcgccttgcggtt +tgcgattttcttcgagggttgacgaatgttgcgcaagtctgtgttgatgtagtgtctcgtg-------tcta +cggagttagccccgggctggtacataaccttattggcatgttgcagaccattgctgatggcaaggcccattt +cacagagactgtaaaacctgtgcttgaccttacaaattccattatacagcgggtggaatgaataacatgtc- +t----------------tatgcattgcccatggg------------atcaccatgcgccctagggctgtttt +gctgctgttcctcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gtcgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattcccagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtttcacaatccggggctggagctcgctctc +gacagccgccccg---------------cccccttggtacctcttggcgcgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgacctgcccca---------gctggggctgcgccgctaac +tgctgtgtcaccggctcctgacacagcccctgtgcctgatgttgattcgcgcggcgccatattacggcgaca +gtataatctgtctacgtcccctcttacatcgtctgtcgcctcaggcactaacttggttctttatgccgcccc +gcttaatcccctcttaccccttcaggatggtaccaacactcatattatggctactgaggcatctaattatgc +ccagtatcgggttgttcgagccacgatccgttaccgaccgttggtgccgaatgctgttggcggctatgcaat +ctccatctcattttggccccagactactaccacccctacatctgttgacatgaattcaattacttctactga +tgttagaattttggttcaacccggtattgcctccgagttagttatccctagcgagcgcctccactaccgtaa +tcaaggctggcgttccgttgagacatcaggtgtggctgaagaggaggctacttccggcctggtaatgctttg +tattcatggctctcctgtaaactcttatactaataccccttatactggggcgctcgggcttcttgattttgc +attagagcttgagttcaggaacttaacgcccgggaatactaatacccgtgtatcccggtacacaagtacagc +ccgtcaccgcctgcgccgtggcactgatggcactgctgagcttaccaccacagcagccacgcgtttcatgaa +ggatctacatttca---ccggcacaaat---ggggttggcgaggtgggtcgtggtattgctctaacactgtt +taatcttgctgatacgcttctcggaggtttgccgacagaattaatttcgtcggccggaggtcagctgtttta +ctcccgccctgtcgtctcagccaatggcgagccgactgttaagttgtatacatctgtagagaacgcgcagca +agataaggggatcgccattccacatgatatagatttgggtgactcccgtgtggtaatccaagattatgataa +ccagcatgagcaggatcggcccaccccttcgcctgccccatctcgccccttttcggttcttcgtgctaatga +tgtcttatggctctc-----------------------------tcttaccgccgctgagtacgac------ +cagaccacatacggttcgtccaccaaccctatgtacgtctcggacactgttacgtttgt---taatgttgct +acgggagctcaggccgttgctcgctctcttgactggtctaaggtcactttagatggccgccctcttactacc +at-----ccagcagtattctaaaacattttatgtcc-tcccgcttcgtgggaagttatctttttgggaggcc +ggcacaactaag--tccggctacccctacaactataataccactgctagtgaccagattttgattgagaatg +cagctggccac------cgtgttgctat-ctctacttatacaactagcctcgg--------------cgctg +gccctgtgtcaatttc-tgcagttggtgtactggccccccattcggctcttgcaatccttgaagacactact +gact---------acccagcccgtg----ctcacacttttgatgatttttgctcggagtgtcgcgccc---t +tggcctacagggttgcgccttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgagggtaggtaaaacccgggagttctaattaa-tt----t--ttcc---t------gt +gccc-ccc--------tc-atac-ctctt---tgc-tt---t-----------------att-t-------t +tcttttct----gc----------------ctttcgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaaa--------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>KU747141.1/17163/1-7163 |Hepeviridae isolate HEV23 nonstructural polyprotein gene, partial cds; and phosphoprotein and capsid protein genes, complete cds +------------------------------------------------------------------------ +----------------------------------------actactgccattgag---caggctgctctggc +tgcggctaactccgccttggcgaatgctgtggtggtccggccgtttttatctcgtgtacaaacagacatcct +tattaacctgatgcaaccccggcagcttgtgtttcggcctgaagtcctttggaaccacccgatccagcgagt +catacataacgagctggagcaata---ttgtcgagctc-gtgctggccgctgcctcgaggtgggtgcccacc +cgagatctattaatgataaccctaatgtcctgcaccggtgcttcctccgcccggttgggagagatgtccagc +gttggtattctgctcccactcgtggcccagcggctaactgccgccgttccgcactgcgtggtttgcctcctg +tcgaccgcacatactgcttcgacgggttctcccgctgtgcttttgccgctgagaccggaattgccttatatt +cactgcatgacctttggccttcggacgttgcagaggctatggcccgccatgggatgacgcgcttgtatgctg +cccttcaccta-ccccctgaggtcctactaccacctggcacctatcacacaacctcttatcttttgatccac +gacggcgatcgcgccgtcgtgacctatgagggggatactagtgcgggttacaaccacgatgtgtccatactc +cgtgcctggatccgcactactaaaatagttggtgaccacccattggtgatagagagggtccgtgctattggc +tgccattttgttctgctcctcactgcagcccctgagccgtcccctatgccttatgtcccgtaccctcgttca +acggaggtgtacgttaggtccatatttggccctggc---------gggtcgccctctctcttcccatctgcc +t----------gctctactaaatcca-catttcatgctgtcccggtccacatatgggaccggctcatgcttt +ttggcgccaccttggatgaccaagccttttgctgctcgcggcttatgacttatctccgcgggatcagctata +aagtgaccgtcggtgcacttgttgccaacgagggctggaatgcttcggaggatgccctcaccgctgtgatta +ctgcagcgtatttgactatctgccaccagcgctacctccgtacccaggctatttctaaaggtatgcgccggc +tagaggttgagcatgcccagaagtttattacaaggttatacagctggttatttgaaaagtc---------ag +gccgcgactatattcccggtcgccagcttcagttctatgcacagtgccgccgctggctctcggctggattcc +acctggaccccagagtccttgtttttgatgaggcggtcccctgc---cgctgccgaagcttcttaaagaa-- +----ggttgccggcaagttttgctgttttatgaagtggctggggcagga------gtgtacctgttttctgg +----------------agccggcggagggcctggttggcgactgtggc--------catgacaacgaggcct +atgaggggtctgaggtggaccctgctgagcctgcccacttcgatatctctgggacctacgcagttcacggcc +accagcttgaggccctttatagggcgttaaacatcccacatgatattgcggctcgcgcgtctcgtttgacag +ctactgtggaacttgctgccagcccgggccggcttgagtgccgtacggtgctcgggaataagactttccgta +catcaatagttgatggtgctcaccttgaggccaatggccc------------------------cgagcagt +atgtcttgacatttgatgattctcgccaggcaatgggggctgggcctcatagccttacgtacgaactcgtcc +ccgccggcctgcaggttaaaatatcctct-------aatggcttggattgtaccgcaatattccct---cca +ggtggggcgccaagtgctgcgccaagtgaggtggcggccttttgcagcgctttatatagatacaataggttc +acccagcgccattcgctgactggcgggctgtggttgcacccagaggggctccttggcctgtttcctcctttc +tcccctgggcacctttgggagtctgcgaaccccttctgcggcgagagcacactttacactcgaacttggtct +acatctggcttctctagtgacttttccccccccgaggcggctatcgccgccccaacccctgatat----ggg +gttaccctcaggtaccccctcgtctgttagtgaatt-----------------ttgggtgct---------- +---------gccgccgtca----tctgaggggt--------------cagcgactgttttgtcgcctgaagt +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ccagtaagcctgccagtccgcctagt +cttattacacctaga-------------------------------------ccttctgctcgtaagccgcc +cacaccacc--------------------------------------accgactcgcacccgccggc----- +-------------------tcctctacacctaccctgatggggccaaggtgtatgcaggctccttgtttgag +tcggattgtgactggttggttaatgcatcgaaccctggccaccgccctggtggcggcctctgtcacgcattt +taccagcgcttcccggagtcgt------tctacccgactgattttgtcatgcgcgaagg---ccttgccgca +tacactttgaacccacgcccgatcatccatgccgtggctcccgactatagggttgagcagaaccccaagagg +ctagaggcggcatatcgcgagacctgctcccgcctcggcacagctgcctacccgttgctggggtcggggatc +tatcaggtccccgtaggtttaagtttcgatgcctgggagcgtaaccaccgccccggcgatgaactttacctt +actgaaccagctgccgcc-------------------------------------------------tggtt +tgaggctaacaagccagccca--------------------------------------------------- +------------------------------------------accggctttaacgatcactgaggataccgc +cc------------gtacggctaaccttgcgcttgagattg------------actccgccactgatgtggg +tcgtgcttgc---gccggctgtactgttaatcccggggttgttcactatcagttcaccgccggggtccctgg +ctctggtaaatctaggtctattcagcagggggatgttgatgttgtagtcgtgccaacccgtgagcttcgtaa +cagctggcggcgccgcggttttgccgcctttacaccacacacagcggctcgtgtcactgccggtcggcgtgt +tgtgatagacgaggcaccttcgctcccgccgcatttgctgttgctccatatgcagcgggcctcatcggtcca +ccttcttggtgatcccaaccagatccctgctattgactttgaacatgccggtttggtaccggcaatccgtcc +tgagcttgccccgactagctggtggcatgtcacccatcgttgccccgccgatgtgtgtgagctcatacgtgg +ggcctacccaaagattcagacgactagccgtgtgttaagatccttgttctggaatgaa------cctgcagt +gggccagaagttggtatttacgcaggcagccaaggcggctaaccccggtgcaatcactgttcatgaggccca +gggcgctacttttacagagactaccattatagccacggccgatgctaggggtcttatccaatcctcccgtgc +acatgccatcgttgcgcttacccgtcatacagaaaaatgtgtcattctagacgcccccggcctactacgtga +agttggcatttctgatataattgttaataacttc------------------------------ttcctggc +cggtg--gtgaagtgggccatcaccgcccctctaccataccccgtggcaacccggaccagaatttagatac- +-----tttacgagcgttccctccatcttgccaaatcagcgcctaccaccagctagctgaggagctgggtcat +cggccggccccagtagccgccgtcctgcccccttgccctgagctcgagcagggcctactctacatgccacaa +gagctcacagtctctgacagtgttttgatctttgaactcacggacatagttcactgccgtatggctgccccc +agtcaacgcaaggcagtcctttcaacgcttgtcggtaggtacggccgtcggactaagttgtatgaggcagcc +cattctgacgtccgtgagtccctggggagattcatccctactatcggaccagtccaggccaccacgtgtgag +ctatatgagttggttgaggccatggtggagaagggtcaggacggctctgctgtgcttgagctcgacctctgc +agccgtgatgtttcgcggatcacattctttcagaaggattgtaataagtttacaacaggtgagaccattgcc +catggcaaggtgggtcagggcatttcggcctggagcaaaaccttttgtgctttattcggcccgtggttccgt +gccatcgagaaggaaattctggctctcctcccgcctaacattttctatggcgacgcttacgaggagtcagtg +ttttctgcagccatttccggagcgggctccagtatg---gtctttgagaatgatttttctgagtttgatagt +actcaaaataacttttccct------------------tggccttgaatgtgtcattatggaagagtgtggc +atgccccaatggcttattcggctgtatcatttggttagatcagcctggactctacaggccccgaaagagtct +ttgaaaggtttctggaagaagcattccggcgagcctggcactctcctttggaacactatctggaatatggcg +atcatagcgcactgctatgaattccgcgatttgagagtggcagcattcaagggggatgattcagtggttctt +tgcagtgactaccgccagagtcgcaatgctgctgccctgatagccggttgtgggttgaaactgaaggttgat +taccgtcccataggcttgtatgccggcgttgtagtggcaccgggcctcggggctctacctgacgtcgtccgg +ttcgccggccgactgtctgagaagaactggggccctggccccgaacgtgctgaacagctacgcctggcggtt +tgtgactttctccgagggttgacgaatgttgcgcaggtttgtgttgatgttgtatctcgtg-------ttta +tggggttagccccgggttggtacataaccttattggtatgctgcagactattgctgatgggaaggcccattt +tactgagactgttaagcctgtattggatcttaccaactctattatacagaggttagaatgaataacatgtt- +c----------------tgtgcaccgcccatggg------------atcgtcatgcgccctggggctgttct +gttgttgctcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcagtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccatcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaacccggggctggagctcgccctc +gacaaccggcccg---------------cccccttggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgccgtcgatctgcccca---------actggggctgcgccgttgac +tgcagtctcacctgcgcctgatacggctccagtccctgatgttgattctcgcggtgctatcttgcgccgcca +atacaatctgtctacttctcctttaacttcatctgtcgcttcagggactaaccttgtcttgtatgccgcccc +cctcaatcctctcctgcctcttcaagacggtactaatactcatattatggcaactgaggcgtccaactatgc +tcagtatcgagttgtccgggctacaattcgttaccgtcctttggtgcctaatgctgtcggtggttatgcaat +ttctatctctttctggccccagaccacgacaacccctacctctgttgatatgaattctattacttctactga +tgttagaattttggtccagcctggcatagcttctgagctggtcatcccgagtgagcgccttcactaccgtaa +tcaaggttggcgctctgttgagacctcgggtgtggccgaggaggaggcgacgtcaggtttagttatgctctg +tatccatggctcccctgttaactcctatactaatacgccctacactggggcattggggcttcttgattttgc +acttgagcttgaatttagaaacctgacccctgggaacactaacacccgtgtgtcccgctatactagcacggc +ccgacaccgtttgcgccgcggtgccgatggtacagccgagcttactaccactgctgccacacgtttcatgaa +ggacctgcatttca---ctgggacgaat---ggagttggtgaagtaggccgtggcatagccctaacattatt +caatcttgctgacacacttctcggcggtttgccgacagaattgatttcgtcggctggaggccaactcttcta +ctcccgcccggttgtctcggccaatggcgagccgactgttaagttatacacctctgtcgagaatgcgcagca +ggacaaaggcattgccataccacacgacatagacttaggagattcccgtgtggttattcaagactatgacaa +ccagcatgaacaggaccggcccaccccgtctccggccccgtctcgtcctttctcggtcctccgagccaatga +tgttttgtggctctc-----------------------------tttgactgcagccgagtatgat------ +cagaccacctatggctcgtctaccaaccctatgtatgtttcagataccgtcacacttgt---gaacgtggcg +acaggtgctcaggccgttgcccgctcccttgattggtccaaagttactttagatggccggcctcttactacc +at-----ccagcagtactctaaaacattttatgtgc-tgccgcttcgtggcaagctctctttttgggaggcc +ggcacaactaag--gccggctacccctataattataacaccactgctagcgatcagattttgattgagaatg +cagccggtcat------cgtgttgccat-atctacttatactactagtcttgg--------------tgctg +gccctgtatctgtttc-agcggttggcgttcttgccccgcactctgctctagctgtgcttgaagatactatt +gatt---------atcctgctcgcg----cccatacttttgatgatttctgccctgagtgccgtaatc---t +cggcttacagggctgtgctttccaatc--------tactattgctgaacttcagcgcct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt-----t-tct--gtt------gt +accc-cct--------tc-taag-ct-tt----gc-tt-tatt--------------------t-------c +tttcttct----gcg----------------tttcgcgctccctg--------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>KU670940.1/17033/1-7033 |Hepeviridae strain kestrel/MR22/2014/HUN, complete genome +-------------------------------ggggatcctgtg------gtattgat--cccgccctgtgc- +-ggtatggaggcccaccagttcctccgtgccgccggggttaccacagccttagag---gctgccgccgttgg +ggccgccaccgcttcgttggctaatgctttcgaggtgcaggcttttaccacccagcggcaggctgagctgct +agttaagcttttttcccctctccagctcgtgttcaacccacagcacgtctgggctcatcccatccagagggt +gattcacaattatcttgag-ggtg---ttgcgaggcgcaaagctggtccatgcctcgaagtgggtgcacacc +cccgttccatcaacgacaaccgcggcgttacacaccgctgttttctcccccctgccggtcgagatgttcagc +ggtggttgtcttgcccccgtcgcggccaggctggcaatatgcgccgctgtgctctgacgggtgccgcccctt +ctgatcttactttctgcttttctggatttgagaaatgtcgccactacgcggacacgggcctagccctttatt +cgctgcatgacctccatcctactgccgttgcgactgcaatgcggcagcatggcatgaagcgcttacttgcgg +tgctccatctc-ccgcctgaggccatgctgccgcaaggtgtgtatgtgacccctacgtacacggcccgggtc +atcgatgaccggcttgtcgttacctaccttggtgacacttcggctggttacaatcatgaccgcgctcttttg +cgcaagtggataaagactacccgagttggcggttgttgcgccattgtcatcgagcgcgtccgcgctgttggc +tgtcacttcctgctggacatcgtcgctgtggatactgtaacacctatgccttacacaccctaccctgaggcc +gatgtcatctatgtccgcagcttgttttcggctgct---------ggtaagccaggtttactccattccatc +tg-------cagctcagcccgctcta-cattccatgctgtccctgttaatatttgggataggcttatgctat +ttggtgccaccctggatgatgatgccttctgttgctccaggttgatgacttacctgcgaggtatctcgttta +aagtcgtggtgggcacgcaggtagccaatgagggctggaccaccgatgagtatgccctcactgcacttgttg +ttgcggcttaccttaccatctgccaccagcgttggattcgcacccagggcatctccaagggcatgaagcggt +tgaccaaagaacacgcccaaggttttcttgcacgtctgatgaaatggctcattttgaagttgtcgtccaaga +aggatggctttattccggggcgtcagcttgagttctataagctctgccaggattgggtgtcagccggctgct +attttgatgtccgtgccttgtgctgtgacaaacagcttacttgtaagtgctttggcacacgtttaaagga-- +----gaaggctgaagatctgcgtgatgggtttaggtgttttgttaaaaa------gggtgccacatgtattg +gaac------------atcattccacgggctgtgttcatgttttctatctgccacgcatgatgatga----- +-----------------------------------------------------------------------t +gttagcgttgagctctata-----------------------------------gtccatccgagccgcctg +ccagtgtcaaagactctgaacgtcctg---------------------------------------tcagcc +caccccctattaaagagccttttgttgcagcaaacgagccga---------------------tagtgcagc +ccggctccgctgttaggggctgtggtgaag-----------------------------------------t +ctatgagcctaaaggtgtggataatttcatctataaagctgtcgagcgtgcgctggcgattttccg------ +--------------tgctaaggcaaagaaatcgacaactatccccactg---------agtttaatgctgtt +gcccat-------------ttagcacagtggacctctgccatgtgggtccctgta----ctacccactgttg +tgtc----------------atcgccaaacccattctatgctgcgtctgctctg------------------ +acatctcagtcatctcgtcgtacagcttccctttatgatgcccttgatgcgct---------------caga +gcttc----agagatcgctgcgctcgcaaatggaga-----------------ccaagagct----g----- +---------gctgcggagt----tggaggacat-------------tacaatgtcctcccctcgaccgcagc +ttctg------------------------------------------------------------------- +-------------------------------------------------------------cgttt------ +-tgagagtgcag------------------------------------------------------------ +-------------tagacagc--------------------------------------------------- +----------------------------------------------ggcatagggtcgcctttgacaccgac +gttgccagcttttga-------------------g-----------------accccagctgctgtcccacc +caccgcacagcttgagatcaagagt----------------------aacgtcaaacccccaccgcg----- +-----------------ccttgtccagactctgcccgacggcgcgaggatcctttgcggtgatcttttcagc +agctcgtgtgattggcttgttaatgctagtaatccggaccacataccgggtggtggcatttgcgcccagttc +tacaataagttccctactagtt------ttgagcagccgtggctaatggtg---gaggg---tgctgcggct +tacacgtgcacgccccgtcagatcatccatgcggtggcgcctgactatcgtgccaggagagtccgcacta-- +-ttgaacaggcatatgcggagacactgtcccgtatcggtaccgctgcgtacccactgcttggcgcaggcatt +tataaggttccgtatggtgagtccatacgtgcttggctggcaaaccatcgtcctggtgacgaactctactta +actcgggaggtcgctgac-------------------------------------------------tggta +tgagaagaatcgggatacatcacttattgggac--------------------------------------- +------------------------------------------caagactttgataattacacctgcaaaagc +ca------------acaccatcaacctagccatgcagaagg------------agtcggctggtccatttgg +-caagtttgtggggtcggctgt--tgtggcccccggcgcctatcagtataaattcacggcgggtgtcccagg +ctctgggaagtcatccggtatccaccgtgatgaggttgatgtcgttgttgtccctacgcaccagctcaggca +gcaatggcatgaccgtgggttcaaggtgttcacgcagcatgcggccatccgccaagtgcctgggttacgcat +tgtggttgatgaggccccgtccatgcccccgcatattttggcttatatcatgagtgtggcgtcaaccgtcac +actcttgggggacccaaaccaaatcccggccctcgacttcgaccatactggccttgtcgaagcctccaaacc +tgtgcttgaaccgactgaatggcgtctcacttcccaccgctgcccgcaggatgtctgccacttgctggcggc +tgactaccccggcattaagaccacctcgaaggttgtgcgatctttggtctttaataagactcctccccctga +ggtgcaacgcatcgtattcacccaggcggcaaaagccgcgaacccaggttctattactgttcatgagagtca +gggctctgatttcaacaccaccgcaatcatcgtcaccaacgatgcgcgtgggctgatcctttcatcgtgcgc +ccatgcgattgttgccctcactaggcactccaaacgttgttacgttgttgaccagcctgggttgttgaagga +gattggggttagtgatgccgttctttctaatttc------------------------------ttcatg-- +----a--gccaggccacccaacattatgcccgtccagcagaagtggaaaagtctgagccgggtcctgtgtct +gatgaagcccacatgatccccgcgtcgtgtcagcatgctgctctacatcaactggccgaagtgaccggacat +cggcctacccccgtacgcgccgtggtcccccctggtcctccagtggagcagggtaagctctatatgcccttc +cggcttgacgggcgtgatcaagttactgtgttggccctgtctgagaccgtccactgtcgtatggcggcccca +accgaccggcttgcagtcctcaccactcttgtcggcagatatgctaagaaaactaagttctggagctctgag +gttctgcccgtccgtgagagtctgcgtaagtttatcccaaccctctcccctgttgcgccatccactgtggag +ctggctgagtttgtcaaagccatgtctgacaagggtcaagatgggtctctgattgtgcagcttgacttggcc +gatcgagatgtgaccagaataaccttcttccagaaggactgtaataagttcacccttgatgagactgtcgcc +catggcaaagtcgggcagggtatttctgcatgggcgaaaactgttgtggctttgtttggtgtttggttcaga +gctattgagaaagctattgtggatgcacttcctgagaatgttttgtatggtgaccagtttacgcatgaaaag +ttttctgctttggtggaggcggcaaacttccgccga---gtgtttgagaatgattttagtgagttcgacagt +acccagaataattattctct------------------tgaccttgaatgcacgctgatggccgagtgcggg +atgccagagtggatgattaatctctatcacctgattcgctccgcgtgggtcctccaggcccctcaagagggc +ctgaagggctattggaagaaacattctggcgagcctggcaccttgctgtggaacacagtctggaatatggct +gtcattgcccattgttacaattttcaagatctatctatggctgcgttcaagggggatgattctgttgtgtgt +tgttctttgtacaccacatctgcttctgctgctagtttgatttccgggtgtggcttgaaactcaaggttaat +tttaatgatgtgggtgcgtttgcaggttatatcgtatgtcctggagttggtgtggtgaaagatgttgttagg +tttgttggtaggttgacggaaaagaattgggggccaggtgatgagcggatgcaagaactcatcgaggctgta +cgtgatttcctcaactcgattaggaactctac-caacctggtttgcatgatgaactcgatg------tatta +tggcttcggacaagggctcattatgaaccttattgggttgttgaaaactgttgaggagggccgggcctcttt +tactgaaattgttgctcctatattgaagttaacaaatgtgggcaaacag----------gaataacattctt +t--------------cttgggccccggccatcaat--------gtgttcacaatgcctactta---tttttg +gttgctgtgttacctcatgttcccagtccccccaggatatg-----------------------------ga +gctccag------ttgg------gtccgggggcgg---gaagggccgccgctcgcg-tggcggcccccgcgc +cacc---------------ccattcg--tctgactccggaccccaggggttctttcccgtgtattcat---- +---------------caacaaaccccttctttccagacctc---------------gctcgagtcccccccc +caaaatcagatggggcacgtcgtcgatccgctcttgggagtgactgggttgacggtgcccatagtgggatgc +cagcccgggcccgtgctcgggctcgcgccg-----------ca---------gctggggcagcgccgctgac +caccacggccttagcccctgggtccgctcctgtgcccgacgttgatcaacgtggtaccatcttggccaggca +gtacaaccttacgacttcccccctcacttcgacagtgcccacttcgtctaattcggttttatatgcagctag +cattaacccactgcttccattgcaggatggcactaacactcatatcatggcgactgaggcatctaactatgc +tcagtatcgccttgctgctgccacccttagatttaggccccttgttccaaattctgttgggggttatgccct +ctcgatctcattttggcctcagtcctccacagcccctacctctgtggatatgaactctataactgccacaga +tgttagaataatagcccaacccgggactgccgttgagcttgtcatccctggtgagcgcctgcattatcgaaa +tcaaggctggcgctctgtggagaccaatggggtctcccaggaagaatgtacctccggcttagttctcgcctg +tgtccatgggacccctgtgaactcctatactaacaccccatacacaggggcgcttgggctacttgattttgc +tttgcagatggagtatcgcaacctcacccccggtaatacaaatacgcgggtgaacaggtatcgtaccacctc +caaacaccagattagaaaggctgctgacggcactgctgtggtcgctaccagtgccgcgaccaggtttatgca +ggatattgcccttgtgccgggttctaac---gggatcggtgacatcggcaaagggattgttcaagtgttgtt +caatgttgccgacaccctgttaggtggtcttccaactgagttgattcaaaatgcgggagggcagttgtttta +tggccgcccgcaggtgggtagcaacggagagcctgcggttaagctgtacacatctgttgaggctgctcagct +ggaccagggtattccaatccaacatgatcttgatctgggtgtttcttctgtcacattgcaagattatgacaa +tcaacatcagcatgaccggcccaccccgtctccagctccgcctcgacccgtttccgtgctgcgtactggtga +tgtcctttggctcac-----------------------------gcttcctggcgccgagtataaacagtct +cagacctttgcgagctc---------ccctgtgtactggtctgactcggcaattgttat---caatgttgcc +actggacagcagtctgcagccaaggatattgattggtctaaggtcaccttaaatggcaagcccctgcccact +ag-----cactcatgagcaagttctttattatcagg-tgccttttatggggaagatatcattctggcagcaa +ggcacaaataag--gcagggtatacatataattataatacaaccgcctcagactccttttgggtgtcgcacg +gggttgattaca---catatttgtttat-accaacttatactactatgttagg--------------cgccg +gcccggttaacatcac-gggtatcgcttgcgtgggctccacctccgat---gctgtcaccgcctttaccagc +gggc------gg-------------------catacgctcggggatgattg---tgagctctgcgcccgagt +cggtttgcagaattgcatgatcggtga--------tgcgatggagcgctttcaggacctt------------ +-----------------------tactcttctcaagttttaaat---tt-------tctt---------gat +gtct-cttaatt----tctttaatctttta------tt--------------------agtt-t-----ggt +ttttctttag--gttc------------ttcttttctgccttccgc--------------------aagac- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>KU356183.1/17264/1-7264 |Hepeviridae isolate GoatHEV9, complete genome +---------------------------ggcagacca-cgtatg-------------t-----ggtcgacgc- +---catggaggcccaccagttcataaaggctcctggcgtcactactgctattgag---caggcagctctagc +agcggccaactccgccttggcgaatgctgtggtggttcggcctttcctatcccggctacagacagagatact +cattaacctgatgcaaccccggcagcttgtctttaggcctgaggtcttgtggaaccacccaattcagcgtgt +gatccacaatgagctcgaacagta---ctgtcgagctc-gagccggccgctgccttgaagtgggtgctcacc +cacgatccatcaatgacaaccctaatgtcctccaccgctgcttcttgaaacctgttggccgcgacgtccagc +ggtggtatactgcccccactcgtggccctgcagcgaactgccgccggtcggcccttcgtgggcttccacctg +ttgaccggacgtattgttttgacggcttctccggttgtacgtttgccgctgagacgggggttgcactttact +cgttgcacgatttgtggcctgccgatgttgctgaggctatggcccgccatggtatgacccggctgtatgcag +ccctccacctt-cccccagaagtgctgcttccccctggaacttatcacaccacctcataccttctcatccat +gacggcgatcgtgcagtgatcacatatgagggggattccagtgctgggtataatcatgatgtgtctattctc +cgtgcctggatccgcactactaaggtcaccggtgatcacccgctagtgattgagcgggtccgggcagtaggc +tgtcattttgtgctccttctcacagctgcacctgagccgtcgccaatgccttatgttccataccctcgctct +accgaggtctatgtccggtccatcttcggccccggc---------ggctccccgtccctcttcccatctgcc +t----------gctctactaagtcca-catttcatgccgttcctgtgcacatatgggacaggcttatgctct +tcggcgcgaccctcgacgatcaggccttctgctgttcgaggctaatgacatacctccgtggcatcagttata +aagtcacggtcggcgctcttgtcgccaacgagggttggaatgcttccgaagatgcactgactgctgtgatta +ctgccgcttatctcactatttgccatcagagatatctccgcacacaggccatttcgaaaggaatgaagaggc +tggagcttgagcatgcgcaaaagtttataacacgcctttatagctggctgtttgaaaagtc---------tg +gccgtgattacattcctggtcgtcagttgcagttttatgcccaatgccgccggtggttatctgccggctttc +accttgacccccgtgtgctcgtttttgatgaggcggccccttgc---cgctgccgtagcttcctccgcaa-- +----agctgctcataaattttgttgcttcatgcggtggctcgggcagga------gtgtacctgcttcctcc +----------------agcctgttgaggggagggtcggcgagcagggt--------tatgataatgaagcgt +ttgaggggtcggatgttgaccccgctgaggaggccgttgtgaacatttctggatcctacattgtcactggta +gccagctacagcccctttatcaggcgctcggcatcccttctgacctcgctgcccgagccagtcggcttaccg +ctaccgttgaagtgactgacgctgatggccgccttatctgtgaaactactataggcaataagacctttaaaa +cagtttttactgatggtgcccagttagaggctaacgggcc------------------------agagcaat +atgtgctgtcgtttgatccggccaagcagaccatggctgctggcccacatagtcttagttatgccttgacac +ctactggccttgaggtgcgtgttacttcc-------gccggactcgactgcaaggctgttttccca---tct +ggtgtagcgatcccctccacccctggggaggtgtccgctttttgctcagccttgtacaggttcaatcgctgt +gtccagcggcactccctcatcgggggcctgtggtactaccctgaggggctaattggcctgttcccgccgttc +tctcccggccacgcttgggagtccgccaatcctttttgtggggagagtaccctctacacccggacttggtca +gtgtcagggttttctagctgcttttccccgcttgagccccgtgccccggatttgtcaccgcctgtc---gag +actgacat----------gcctattgctattaatgt-ttcatcc---------ccaaccatc-----tctgc +actgcctcagcccccagcc----tccgaacggg---cgg--------------------ccccctcaccaaa +cctag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttgatagcggtgctgtttcggcccta +tcggacgccgccgtt---------------gcc-------------------cccccggcgccggtgcagcc +cgcaaccca--------------------------------------attatccgggccccgccggcg---- +-----------------gttacttcatacttaccctgatggctcaaaggtgtatgccggctccctttttgag +tctgagtgcacttggctggttaacgcatccaaccctggccaccgtcccggcggtggtccatgccatgcattc +taccaacgtttcccagagtcat------ttgaccccgccgagttcgtcatgtctgacgg---ccttgcggct +tataccctcaccccccggcctattatccatgctgttgcccccgattaccggaaggaacataaccccaaaagg +cttgaggccgcttatcgggagacgtgctctcgccgtggaacagctgcttaccccctgctcggcgccggtata +tacaaagtgcctgttgggctaagttttgacgcctgggaacgtaaccatcgacctggggatgagctgtatctt +actgagccagccatagct-------------------------------------------------tggtt +tgaagctaaccggcctgctct--------------------------------------------------- +------------------------------------------ccctgccctcaccattactgaggacacggc +ac------------gcacagcgaatttggcgctggagctgg------------actcagctaccgaggtcgg +ccgggcatgc---gctggctgtcgtgttgagcctggcgtcgttcactaccaatttacggcgggtgtgcccgg +ctccggtaagtcccgttcagttcagcagggtgaggtggatgtggtggtggtgccaactcgtgagctgcgtaa +ttcatggcggcgccgcgggtttgcagcctacacacctcacactgcggcccgtgtcacccgtggtcgcaggat +tgttattgatgaggtcccatcgcttccaccgcatctacttttactccatatgcagagggcctcgtcagtcca +tcttcttggtgaccccaaccagatccctgccattgactttgagcatgctggccttgttccggcgatccggcc +tgagcttgtccccaccaagtggtggcatgtcacacacagatgtcctgccgatgtctgcgagctgattcgtgg +tgcataccccaaaattcagaccgcaagccgtgtcctccgctctttattctggggggag------cccccggt +tggccagaagttagtatttacccaggcagcaaaggccgccaaccctggtgcgattacagtccatgaggccca +gggagctacatttactgaaactactattattgccacagcagatgctcgcgggctaattcaatcctccagggc +ccacgctatcgtggccctgacgcgccacacggagaagtgcgtggttattgacgcccctgggctccttcgtga +ggtcggcatttccgatgctattgtcaataatttt------------------------------ttcctctc +tggcg--gccagattggtcaacgccgcccgtcagttatcccacgcggcactgtcgactgcaacgttgacac- +-----gcttgatgcatttccaccctcctgccaattcagtgcctatcaccagcttgcggaggagctaggccat +cgaccggccccaatcgctgccgtcctgcccccttgcccggagcttgagcagggccttctttatatgcctcag +gaattggctacgtctgatagtgtgcttacgtttgaactgacagacatagtgcactgccgtatggcggcacct +agtcagcgtaaagctgtcctgtccacccttgtcggtcggtgcggccgccgtacgaagctgtatgaagccgct +catacggatgtccgcggctccctaaaccactttatccctgagcttagccctattagtttcaccacttgtgag +ctttatgagcttgtagaggctatggtggagaagggccaggatggctctgcagtcctagagcttgatttgtgc +agccgtgatgtatctcgtataacattctttcagaaggattgtaataaatttacaacaggtgagacgatagcg +cacggcaaagttgggcaggggatatctgcgtggagtaagaccttctgtgccctgtttggtccatggttccgc +gctattgagaaggagatccttgcggcacttgctcctaatgtattctacggtgacgcatatgaagatacagtc +ttggcggccgctgtggctggtgctcctggctgcaag---gtctttgagaacgacttctctgagtttgatagc +actcaaaataatttttcact------------------tgggttggagtgtataatcatggaggagtgcggc +atgccgcagtggatgatccggccttatcatcttgtccgctctgcctgggtgctgcaggccccaaaagagtcc +ctacgagggttttggaagaagcactcaggtgagcctggcaccttgctgtggaacactgtttggaacatggcg +gtcattgcacattgttatgagtttcgtgatttgaaagttgcagcatttaagggggatgactctgttgtgctc +tgcagcgactatcggcagagccgcaatgcggccgcattaattgctggctgtgggctgaaacttaaggtggac +tttagacccattggattgtatgctggtgttgttgtggccccgggtctcgggaccctccctgatgttgttagg +tttgctgggcggctctcagagaaaaactgggggccgggtttggagagggcagaacagctacggctggctgtc +tgtgattttctgcgaaagttaacgaatgtggcccaggtttgtgtggatgttgtttcgcagg-------ttta +tggtgttagccccggcttagtacataacctgattggaatgctccagactattgctgatggtaaggcgcattt +tactgagacaatcaaacccgttcttgaccttactagttccattatatatcgggtggaatgaataacatgttc +t----------------tttgctctgtgcatggag---------atgccaccatgcgctctcgggctcttct +gtttctgctcctcgtgtttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gtcgccgcgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgcatctgacatatcaaccgccgccggggctggagctcgccctc +ggcagccggcccg---------------cccactcggttccgcttggcgtgaccaatccca----------- +------gcgccccgccgcttcctcccgccgtcgatctgcccca---------gctggggcttcgccgttgac +ggccgtggctccagcccccgacaccgctccagttcctgatattgattctcgcggcgccatattacgtcgcca +gtataatttatcaacatctccgcttacgtccactattgctactggtactaatcttgtcttgtatgccgcccc +gctgagccccttgctcccgcttcaggatggaactaacactcatattatggccactgaggcttcaaattatgc +ccagtaccgcgttgcccgtgctactatccggtaccgcccgttggtgccgaatgctgttggtgggtacgctat +ctccatctctttttggccccagacaacaactactccgacatctgttgatatgaactctatcacctccactga +tgttcgaattcttgtccaacccggtatcgcctctgaactcgtgatccctagtgagcgcctgcactatcgcaa +tcaaggttggcgttcggttgagacctctggtgttgcggaggaggaggcgacttctggtcttgttatgctttg +cattcatggctcacctgtgaactcctataccaatacaccttatactggtgcacttggcttgcttgatttcgc +gctcgagctcgagtttcgcaatctaacgcctggtaacacgaatacgcgtgtctcccgttattcgagcagtgc +gcgccacaagctacgccgagggcctgatggcactgctgaattaaccaccactgcagctacccgctttatgaa +agatcttcacttta---cagggactaat---ggtgttggtgaggttggtcgtggcatagcgttaaccctgtt +taaccttgctgacacgcttctcggtgggctgccgacagaattgatttcgtcggctagtggacaattgttcta +ttctcgccccgttgtctcagccaatggcgagccgacagtgaaactttacacctcagtcgagaatgcccagca +ggataagggtatagctatcccccacgatattgatcttggtgagtcccgagttgtcatccaggactacgataa +ccaacacgagcaggaccgccccaccccctctccggccccttctcgccccttctctgtccttcgtgctaatga +cgtgctctggctgtc-----------------------------ccttacagctgctgagtacgac------ +cagactacctatggctcttctaccaatcctatgtatgtttctgacactgtgacatttgt---taatgtagct +actggtgcccagggagtttcccgctccctcgactggtctaaggtcactcttgatgggcgtccacttactact +at-----ccagcagtactctaaaacattctatgtct-tgcctctccgcggtaagctttccttctgggaggct +ggtaccactaag--gctggctatccttataattataatactactgctagtgaccagattctaattgagaatg +cgtctggtcac------cgtgtctgcat-ttcaacttatactactaatcttgg--------------ctctg +gccctgtctctatttc-tgctgtcggtgtccttgcacctcactctgcgttggccgctttggaggataccgtt +gact---------atcctgctcgtg----ctcatacttttgatgatttctgccctgagtgccgtacac---t +cggtctccagggctgtgcatttcagtc--------aactgttgccgagctgcagcgtct------------- +--------taaaatgaaggtgggtaaaactcgggagtattgattta-tt----tt-gttt----------gt +gcct-ccc--------tt------ctgct--ttgt-tt--cttt--------------tatt-t-------t +tcttttct----gcg----------------ttccgcgctccctg---------------------aaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------a----------------------------- +------------------------------------------------------------------------ +----------- +>KT447527.1/17258/1-7258 |Hepeviridae isolate SingHEV20, complete genome +------------------------gaaagcagacca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggctaattccgccttggcgaatgctgtggtggtccggccgttcttatcccgtgtccaaactgagattct +cattaacctgatgcaaccccggcagcttgtgttccgacctgaggttctctggaaccacccgatccagcgagt +cattcataatgagttagagcaata---ctgccgagccc-gcgctggccgctgccttgaggtgggtgcccacc +cgaggtctattaatgataatcccaatgttttgcaccggtgtttcctccgcccggttggaagagacgtccagc +gttggtactccgcccccactcgtggcccagcggccaattgccgccgttctgcactacgtggtttgccccctg +tcgatcgcacatactgcttcgacggttactcccgctgtgcttttgccgctgagaccggaattgccttatatt +cactgcatgatctttggccttcggatgttgcagaggctatggcccgccatgggatgacgcgcttatatgctg +ccctccattta-ccccctgaggtcctattaccacctggcacctatcatacgacctcttaccttttgatccac +gacggcaaccgcgccgtcgtgacctatgagggggacaccagtgcaggctacaaccatgacgtatccatactt +cgtgcctggattcgcaccactaaaatagttggtgaccacccactagtgatagagagggttcgcgccattggc +tgccattttgtcctgctcctcaccgcagcccctgagccgtctcccatgccttatgtcccataccctcgctca +acggaggtgtatgttaggtctatatttggccctggc---------gggtcgccctctctcttcccaacagcc +t----------gttctaccaaatcta-catttcatgccgtcccggtccatatatgggaccggctcatgcttt +tcggtgccactttagatgatcaggccttctgctgctcgcggcttatgacttatctccgtgggatcagttaca +aagtgactgttggtgcactggttgccaacgagggctggaatgcctcggaggatgcgctcaccgctgtgatta +ctgcagcgtatttgactatctgccatcagcgctacctccgaactcaggccatttctaaaggcatgcgccggc +tagaggttgaacatgcccaaaagtttattacaagattatatagctggttgtttgagaagtc---------ag +gccgtgattatatccccggccgccagcttcagttttacgcacagtgccgccgctggctctcggctggcttcc +atctagatcctagggttcttgtttttgatgaggcggtcccctgc---cgctgccgtagcttcctaaagaa-- +----ggttgctggcaaattttgttgttttatgaaatggttggggcagga------gtgcacttgttttctgg +----------------agccggcggaaggcttggttggtgattgtggt--------catgacaacgaggcct +atgaggggtctgaggtggaccctgctgagcctgcccattttgatatttctgggacttatgcagtccacggcc +gccagcttgaggccctttatagggcgctaaatatcccacatgatattgcggctcgtgcttcacgtctgacgg +ctactgtggagcttgccgccagcccaggccggcttgagtgtcgtacggtgctcgggaataagactttccgta +catcaataaccgatggcgcccaccttgaagccaacggccc------------------------cgagcagt +atgttcttacgtttgatgactcccgccaggcgatgggagccggacctcacagccttacgtacgaactcgtcc +ctgccggcctacaggttaagatatcttct-------aatggcctggattgtactgcagtattcccc---cct +ggtggggcgccaagcgctgcgccaagtgaggtggcggccttttgtagcgcactatacagatataataggttc +acccagcgccattcgctgactggcgggctgtggctgcaccccgaggggcttcttggtctgtttcctcccttt +tcccctgggcacctttgggagtctgctaaccccttttgtggcgagagcacactttacactcgaacctggtct +acatctggcttctcaagtgacttctccccccccgaggcggctatcgccgccccgacctctgatat----ggg +gctaccctctggtgcctcctcgtctgctagtggtgt-----------------ttgggcgct---------- +---------ccccccaccc----tctgaggggt--------------cggtggctacctcaccacctcaggc +tccag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtaagcctgctagcccacctagt +cttattacatctaga-------------------------------------ccccctgctcgtaagccgcc +cacaccacc--------------------------------------accggctcgcacccgccggc----- +-------------------ttcttttcacttaccctgatggggccaaggtgtacgcaggctctttgtttgag +tcagactgtgactggttggttaatgcgtctaaccctggccatcgccctggcggcggcctctgccatgcgttt +taccagcggtttccggagtcgt------tccacccgtctgactttgtcatgcgtgaagg---cctcgccgca +tatactctgagcccccgtccgatcatccatgctgtggcccctgactatagggttgagcagaaccccaagagg +ctagaggcggcatatcgtgagacctgctctcgcctcggtacagctgcctacccgttgctgggatcggggatt +taccaggtcccagtgagtttaagcttcgatgcctgggagcgtaaccaccgcccgggcgacgagctctatctt +actgaaccagctgccgcc-------------------------------------------------tggtt +cgaggttaataagccaaccca--------------------------------------------------- +------------------------------------------gccggctttaactattacagaggataccgc +cc------------gcacggccaaccttgcgcttgagattg------------actctgccactgaggtggg +ccgtgcctgc---gccggttgcactgtcagccccggggttgtccattaccagtttaccgccggggtccctgg +ttctgggaagtctaggtccatacagcagggcgatgttgatgttgtggttgtgccgacccgtgagcttcgtaa +cagttggcggcgccgtggctttgccgcttttacaccacacacagcggctcgcgttactgccggccggcgtgt +tgtgatagatgaggcaccctcgcttccaccgcatttgctgctgctccacatgcagcgggcctcatcagttca +ccttcttggcgaccccaaccagatccctgccattgactttgagcatgccggtctggtcccggcaatccgccc +tgagcttgccccgactagctggtggcacgttactcatcgctgccccgccgatgtttgtgagctcatacgtgg +ggcctacccaaagatccagacgactagccgtgtgatgcgatctttgttctggaacgag------cctgcggt +aggccagaagttggtcttcacgcaggctgccaaggcggctaatcccggtgcaattactgtccatgaggccca +gggcgccacgtttacagagaccactatcatagccacggccgatgctaggggtcttatccaatcttcccgtgc +acatgccatcgttgcgctcacccgccacacagaaaaatgtgttgttctggatgcccccggcttattgcgtga +agttggcatttctgatataattgttaataacttt------------------------------ttcctggc +cggcg--gtgaagtgggccatcaccgcccttccaccataccccgtggtaacccagaccagaacctagatac- +-----cctaaaggcgtttcctccatcctgtcaaattagtgctttccatcagctggctgaggagctgggccac +cggccggccccagtggccgccgtcttacccccttgccctgaactcgagcagggtttgctctatatgccgcag +gagctcacagtctctgatagtgtcttgatctttgaactcaccgacatagttcactgtcgtatggctgccccc +agtcaacgtaaggcagtcctttcaacgctcgtcggcagatatggccgtcggacgaagctgtatgaggcggct +cattctgacgtccgtgagtccttggggagattcatccccactatcggaccagttcaggccactacctgtgaa +ctatacgagttggttgaggccatggtggagaagggtcaggatggctccgccgtgcttgagcttgacctctgc +agccgcgatgtctcgcggattacatttttccagaaagactgtaataaattcacaacaggtgagactatcgcc +catggcaaggtgggccagggcatctcggcctggagcaaaactttttgtgccctatttggcccatggttccgt +gccattgagaaagagattttggccctgctcccgcccaatattttctacggtgatgcttatgaagagtcagtg +ttctctgcagccatctccggagcgggcaccagtatg---gtctttgagaacgatttttctgagtttgatagc +acccaaaataacttttccct------------------tggccttgagtgtgtcattatggaggagtgtggc +atgccccagtggcttatccgactgtatcacttggttagatcggcctggactctgcaggccccgaaagagtcc +ctgaaaggtttctggaagaaacattccggcgaacctggcaccctcctctggaacaccatctggaacatggcg +atcatagcacactgttatgaatttcgcgacctgagagtggcagcgtttaaaggggatgactcagtggtcctc +tgcagtgactaccgccagagccgtaacgcggctgccctgatcgccggttgtgggttgaaactgaaggttgat +taccgtcccataggcctgtatgctggcgttgtagtggccccgggccttggggcactccctgacgtcgtccgg +tttgccggtcgattgtcggagaagaactggggcccgggacccgaacgtgccgaacagttgcgcttagcagtt +tgtgattttctccgaaggttaacgaatgttgcgcaggtctgtgttgatgttgtatcccgtg-------tcta +tggggttagccctgggttggtacataaccttatcggcatgctacagactattgctgatggaaaggcccactt +cactgagactgttaaacctgtactggatcttaccaattctatcatacagaggttagaatgaataacatgtc- +c----------------tgtgcatcgcccatggg------------atcgtcatgcgccctagggctgttct +gctgttgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaatccggggctggagctcgccctc +gacagccggcccg---------------cccccttggctcctcttggcgcgaccagtccca----------- +------gcgcccccccgctgccccccgtcgccgatctacccca---------gctggggctgcgccgttaac +tgctgtttcacccgcacctgatacggccccggtccctgatgttgactctcgcggtgctatcttgcgccgcca +gtataatttgtccacctcccccttaacctcatccgtcgcttctggaactaaccttgttttgtatgctgctcc +acttaatccccttctgcctctccaggacggcactaacactcatatcatggccactgaggcgtctaactatgc +tcagtaccgagttgtccgggctacaatccgctaccgccctttggtgccgaatgctgttggtggctatgcgat +ctctatctccttctggcctcaaaccacaactacccctacctctgttgatatgaactctatcacttctactga +tgtcagaattttggtccagcctggtatagcttctgagctggtcatcccgagtgaacgcctccattaccgtaa +tcaaggttggcgctctgttgagacctcgggcgtggccgaggaggaggcaacatcaggcctggttatgctttg +cattcatggctcccctgttaattcttatactaatacgccctataccggggcgctggggcttctcgattttgc +acttgaacttgagtttaggaatctcacccctgggaacactaacacccgtgtgtcccgttatactagtacagc +ccggcaccgtttgcgccgcggtgctgatggtacggccgagcttacaactactgcagccacacgttttatgaa +ggacctgcatttca---ccgggacgaat---ggggttggtgaggtgggtcgtggtatagccctgacgttatt +caatcttgctgacacacttctcggtggtttgccgacagaattgatttcgtcggccggaggacaactatttta +ctcccgtccggttgtctcagccaatggcgagccaactgttaagttatacacctccgtcgagaatgcgcagca +ggacaaaggtattgctataccacacgatatagacttaggggattcccgtgtggttattcaggactatgataa +tcagcatgaacaggatcggcctaccccatcgccggctccgtctcgtcctttttcggtcctccgggccaatga +tgttttgtggctctc-----------------------------cctgactgcagccgagtatgac------ +cagaccacctacggctcgtccaccaaccctatgtatgtttcagatactgtcacacttgt---taacgtggcg +acaggagcccaggctgtggcccgttctctcgactggtccaaggtcactctagatggccggcctctcaccact +at-----ccagcagtattctaaaacattctatgtgt-taccactccgtggcaagctttccttttgggaggct +ggtacaactaaa--gccggctacccttacaattacaataccactgctagtgaccagatcttgattgagaacg +cagccggccac------cgtgttgccat-atctacttatactaccagtctcgg--------------tgctg +gccctgtgtctgtctc-tgcagttggcgttcttgccccgcactctgctctagctgtactcgaagatactatt +gatt---------accccgctcgcg----ctcatacttttgatgatttttgccctgagtgccgtaatc---t +cggcttacagggctgcgcttttcaatc--------taccattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt-----c-ttt--gct------gt +gccc-cct--------tc-taag-ct-tt----gc-tt-tatt--------------------t-------c +tttcttct----gcg----------------tttcgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------aaaaaaa----------------------- +------------------------------------------------------------------------ +----------- +>KT447528.1/17257/1-7257 |Hepeviridae isolate SingHEV23, complete genome +---------------------------ggcagacca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggttcggccgtttttatctcgtgtacaaacagagattct +tattaatttgatgcaaccccggcagttggttttccgtcctgaggtactttggaatcatcctatccagcgggt +tatacacaatgaattggagcagta---ctgccgggccc-gggctggtcgttgtttggaggtgggggcccacc +cgagatctattaatgacaaccccaacgtcctgcatcggtgctttcttagaccggttggtcgagatgtacagc +gctggtactctgctcccacccgtggccctgcggccaactgtcgccgctccgcgctgcgtggtcttccccctg +ccgaccgcacttattgctttgatggattctcccgttgtgcttttgctgcagagaccggtgtggccctctatt +ctttacatgacctttggccggctgatgttgcagaggctatggcccgccatgggatgacacgcctatacgccg +cactgcatctc-cctcccgaggtgctgctaccgcctggcacctaccacacaacttcgtacctcctgattcac +gacggtaaccgcgctgttgtgacttatgagggcgatactagtgcgggctacaatcatgatgtttccatactt +cgtgcgtggatccgtaccactaaaatagttggtgaccacccgttggttatagaacgtgtgcgggccattggg +tgtcattttgtgctgttactcaccgcagcccctgaaccgtcacctatgccttatgtcccctacccccgctca +acggaggtgtatgtccggtccatatttggccctggc---------ggctccccatccttgttcccgtcagcc +t----------gctctactaaatcta-catttcatgctgtcccggtccacatctgggatcggctcatgctct +ttggtgccaccctggatgaccaagcgttttgttgttcacggctcatgacctacctccgtggtatcagctaca +aggtcactgttggtgcgcttgtcgctaacgaggggtggaatgcctctgaagatgctcttactgcagtgatca +ccgcggcttatcttaccatttgccatcagcgttaccttcgcacccaggcgatatctaagggcatgcgccggt +tggaggttgagcacgcccagaaatttattacaagactctacagttggctatttgagaagtc---------tg +gccgtgattacatccccggccgccagcttcagttctacgcacagtgtcggcggtggctatctgcaggctttc +acctagaccccagggtacttgtttttgatgagtcagtgccatgc---cgctgtaggacgtttttgaagaa-- +----agttgcaggtaaattctgctgttttatgcggtggctgggtcagga------gtgtacctgcttcttgg +----------------aaccagccgagggcttggttggcgaccaaggt--------catgacaacgaggcct +atgagggttctgaggtcgacccggctgaacctgttcattttgatgtttctgggacctatgccgttcacgggc +accagcttgaggccctctatagggcactcaatgtcccacatgatatcgccgctcgagcctcccgcctaacgg +ctactgttgagctcactgcaaacccagaccgattggagtgccgcactgtgattggtaacaaggtcttcagga +cgaccgtggttgatggtgcccatcttgaggcgaatggccc------------------------tgagcagt +atgtcctatcatttgacgcctcccgccagtctatgggggctgggtcacatagcctcacttatgagctcaccc +ctgccggcctgcaggtcacgatctcatct-------aacggcctggattgcactgccacattcccc---cct +ggcggcgcccctagcgctgcgcccggggaggtggcggctttttgcagtgccctttataggtataataggttc +acccagcggcactcgctgaccggtgggttatggttacaccctgaggggctgctaggcattttcccccctttc +tcccctgggcatgtttgggaatctgctaaccctttctgcggggaggggaccttgtatacccgaacttggtca +acatctggcttttctagtgacttctctccccctgaggcggctgcccctgtttccgctgccgcccc----ggg +gttgcccc---accctaccccacctgttagcgacat-----------------ttgggtact---------- +---------accaccgcct----tcagagaggt--------------tccgggtcgatgcggcatctgtgtc +ccccg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcccgctggtctacctggc +cccactgtgcttacc----------------------ccccccccccccctccctcctgtgcgtaagccatc +aacacctcc--------------------------------------gccatcccgcacccgtcgtc----- +-------------------tcctctacacctaccccgacggcgctaaggtctatgcggggtcattgtttgaa +tcggactgtgattggttggttaatgcctcaaatccgggccaccgccccggaggtggcctttgtcatgctttt +taccaacgtttcccggaggcct------tttattcgactgagttcattatgcgtgaggg---ccttgcagca +tataccttgaccccgcgccctataattcatgcagtggctcccgactatagggttgagcaaaacccgaaaagg +cttgaggcggcgtaccgggaaacttgttctcgtcgtggcaccgccgcctacccgcttttaggttcgggtata +taccgggtccctgtcagcctcagttttgacgcctgggaacgcaaccaccgccctggcgatgaactttacttg +actgagcccgccgcgacc-------------------------------------------------tggtt +tgaggctaacaagccggcgca--------------------------------------------------- +------------------------------------------gccagcgctcactataactgaggacacggc +cc------------gcacggccaacctggcactagagatcg------------atgctgccacagaggttgg +ccgtgcttgt---gccggctgcactgttagtcctggggttgtacactatcagttcaccgccggggtcccggg +ctcgggcaagtctcggtctatacaacaaggagatgttgatgtggtggttgtgcccacccgggagctccgtaa +tagttggcgccgtcggggctttgcagcttttacacctcacacagcagcccgtgttactatcggccgccgcgt +tgtgattgacgaggctccatctctcccgccacacttgttgctgttacacatgcagcgtgcctcctcggtcca +tctccttggcgacccgaatcagatccctgctattgattttgaacacgccggcctggttcccgcgatccgtcc +tgagcttgcgccaacgagctggtggcacgttacacaccgctgcccggccgatgtgtgcgagctcatacgtgg +ggcctaccctaaaattcaaaccacgagccgtgtcctgcggtccctgttctggaacgaa------ccggctat +cggtcagaagttggtcttcacgcaggccgctaaagctgccaaccctggagcgattacagttcacgaggccca +gggtgccaccttcacagagaccacaattatagctacggccgatgccaggggccttatccagtcatctcgggc +tcatgccatagtcgcacttactcgccatactgagaagtgtgttatcctggatgctcccggcttgttgcgtga +ggtcggcatttcggatgttattgtcaataacttc------------------------------ttccttgc +tggcg--gggaggtcggccaccaccgcccctctgtgataccccgaggtaaccctgatcagaacctcgggac- +-----tttacaagccttcccgccgtcctgccagattagtgcttatcatcaattggctgaagaactgggccac +cgcccggcccctgtcgccgccgtcttgcccccttgccctgagcttgagcagggcctgctctatatgccacaa +gagcttactgtgtccgatagtgtgctggtatttgagctcacggatatagtccattgccgcatggccgctccg +agccagcgaaaggctgtcctctcaacacttgtagggagatacggtcgtaggactaagttgtatgaggcagcc +cacgcagatgtccgtgagtccttagccaggttcatccccactatcgggcctgttcaggccaccacatgtgag +ttgtatgagttggttgaggccatggtggagaaaggacaggacggctccgctgtcctagagcttgacctttgc +aatcgtgatgtatcacgcattacattcttccaaaaggattgcaataagtttacaaccggtgagactatcgcc +catggcaaggtcggacagggtatatcggcctggagtaagaccttctgtgctttgtttggcccgtggttccgt +gccatcgaaaaagagatactggccctactcccgcctaatatcttttatggcgacgcctatgaggaatcagtg +tttgctgctgctgtgtccggggcggggtcgtgcatg---gtgtttgaaaatgacttttcagaatttgacagt +actcaaaacaatttttctct------------------tggtcttgagtgtgtggttatggaggagtgcggc +atgccccaatggctaattaggctgtatcatttggttcggtcggcttggattttgcaggcgccgaaggagtct +cttaagggtttttggaaaaagcattctggtgagcctggtaccctcctctggaacaccgtctggaacatggca +attatagcacactgctatgagttccgtgacttccgtgttgccgctttcaagggcgatgattcggtggtcctt +tgtagcgactaccggcagagccgcaatgcggctgccttaattgcaggctgcgggctcaaactgaaggttgat +taccgccctatcgggctgtatgccggggtggtggtggcccctggtttggggacgctacctgatgttgtgcgt +tttgctggccggctgtctgaaaagaattggggccccggcccggaacgtgctgagcagctgcgtcttgctgtt +tgtgacttccttcgagggttgacgaatgttgcgcaggtctgtgttgatgttgtgtcccgtg-------ttta +tggagttagccccgggctagtacataaccttattggcatgctgcagactattgccgacggcaaggcccattt +tacagagactattaaacctgtacttgaccttacaaactctatcatacagcgggtggaatgaataacatgtc- +t----------------tttgcatcgcccatggg------------atcaccatgtgccctagggctgttct +gttgttgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gtcgtcgtgggcg-gcgcaacggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgccgatgtcgtttcacaatccggggctggaactcgccctc +gacagccgccccg---------------tccccttggctccgcttggcgtgaccaatccca----------- +------gcgcccctccgctgtcccccgtcgtcgatctgcccca---------gctggggctgcgccgctaac +tgctgtatcaccagcccctgacacagcccctgtacctgatgttgactcgcgcggtgctatcctgcgccggca +gtacaatttgtccacatctccgctcacgtcgtctgtcgcttcgggtactaatttggttctctacgccgctcc +actaaaccctctcttgcctctccaggatggcaccaacacccacattatggctactgaggcatctaattacgc +ccagtatcgggttgttcgagctacgatccgttaccgcccgctggtgccaaatgctgttggtggctatgctat +ctctatctctttttggcctcaaactactactactcccacttcagttgatatgaactccattacttccactga +tgttaggattttggttcagcccggtattgcttctgagttagttatccctagtgagcgacttcattaccgcaa +tcaaggctggcgctctgttgagaccacgggcgtggccgaggaggaggctacctctggtctggtaatgctctg +catccatggttctcctgttaactcttatactaatacaccctacactggtgcattggggcttcttgactttgc +attagagcttgaatttagaaatttgacacccgggaacactaacacccgtgtttcccggtacaccagcacagc +ccgccaccgcctgcgccgcggtgctgatgggaccgctgagcttaccaccacagcagccacacgttttatgaa +ggacttgcacttca---ctggcacgaac---ggcgttggtgaggtgggccgtggtatagccctaacactgtt +taacctcgctgatacgcttctcggtggtttaccgacagaattgatttcgtcggctgggggtcaactgtttta +ctcccgccctgtcgtctcagccaatggcgagccgacgattaagctatatacatctgttgagaatgcgcagca +agacaagggcattaccatcccgcatgatatagatttgggtgattctcgtgtggttatccaggattatgataa +ccagcacgagcaagaccggcctactccgtcgcccgctccttctcgccctttttcagttctccgtgccaatga +tgtcttgtggctttc-----------------------------cctcactgccgctgagtatgat------ +cagactacatatgggtcgtccaccaacccaatgtatgtttccgatacggtcacgctcgt---caacgtggcc +actggtgctcaggctgttgcccgctcccttgattggtctaaagttactctggatggtcgccctcttaccacc +at-----ccagcagtattcaaagacattttatgttc-tcccgctccgcgggaagttgtccttttgggaggct +ggtaccactaag--gccggctacccgtataattataacactactgctagtgatcaaattttgattgagaacg +cggctggccac------cgtgttgctat-ctctacctacaccactagcctggg--------------tgccg +gccctacctcgatctc-tgctgttggtgtactagccccacactcggccctcgctgttcttgaggatactgtt +gact---------accctgctcgtg----cacacacttttgatgatttctgcccggagtgccgtaccc---t +tggtctgcagggttgtgcgttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattaa-tt----c--c--c-tct------gt +gccc-cct--------tc-atag-ctctctttggc-tt--------------------tatt-t-------c +ttacttct----gc----------------tttccgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaa----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>KT633715.1/17246/1-7246 |Hepatitis E virus strain ZhJPJ0503, complete genome +----------------------------gcagacca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---ctggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatctcgcgtacagacagagcttct +tatcaatttgatgcaaccccggcagttggttttacgccctgaggtactctggaatcaccctattcagagggt +tatacacaatgaactggaacagta---ctgccggactc-gggctggtcgttgcttggaggttggagctcatc +caagatttatcaatgacaaccccaacgtcctgcatcggtgttttcttagaccggtcggtagggatgtccaac +gctggtactctgcccccaccagcggtcctgcaggtaactgccgtcgctccgcactacgtggcctcccacctg +ttgatcgtacctattgctttgatggattctctcgctgtgcctttgctgcagagaccggtgtggccctctact +ctttgcatgacctttggccagccgatgttgctgaagccatggcccgcgatgggatgccacgcctgtatgccg +cacttcacctc-cctcctgaggtactgttaccgcccggtacctaccacacaacctcgtaccttcagattcac +gatggcaaccgtgctgtcgtgacttacgaaggtgatactagcgcaggctacaaccatgaagtctctatactt +cgtgcgtggattcgcacgacaaaaatagttggtgatcacctgctggttatagagcgagtgcgggctatcgga +tgtcattttgtgttgctgctcaccgcggcccccgaaccatcacccatgccttatgtcccttaccctcgttcc +actgaggtgtatgtacgatccatatttgtccctgtc---------gggtctccgtctcttttcccatcagct +t----------gctccacgaaatcta-cttttcatgccgttccggtgcatatccgggatcggctcatgctct +tgggcgccactctggatgaccaggcgttctgttgttcacggctcatgacatatcttcgtggtattagctaca +aggtcactgtcggtgcgcttgtcgctaatgagggtcggaatgcatctgaggatgccctcactgcagtgatca +ctgcagcctatttaactatctgccatcagtgctaccttcgtactcaggcaatatccaagggtatgcgccggc +tggaagttgagcatgctcagaagttcatcacaaggctttacagctggttatttgagaaatc---------tg +gtcgtgattacattcccgggcgccaacttcagttctatgcacagtcccgacgttggctttccgcaggttttc +atctagaccctagagtacttgtgtttgatgagtcagtgccatgc---cgctgtcggactttcttaaagtg-- +----ggccgcgggtaaaatctgttgcttcatgcagtggttagggcagga------ctgcacttgctttttgg +----------------agccggctgaaggtttagtcggagatcaaggt--------catgacaacgaagctt +atgaaggttctgaggtcgatccagctgagcccgcgcatcttgatgtgtcgggtacctatgccgttcatggac +gccagcttgaggctctttacagggcactcaacattccgcatgacattgctgcccgagctgcccggtttacag +caactgttgagctcgatgcaggtccagatcgtttggagtgccgcaccatgattgggaataagaccttccgga +cgacagtggtcgacggtgcccatcttgaagcaaatggtcc------------------------tgaacaat +acgtttcatcgttcgatgcctcccgccagtctatgggagccggatcgcatagcctcacttacgagctcaccc +ctgccggcttgcaggttaggatatcatct-------aatggcttggattgcactgccacattccct---cct +ggtggagcccctagtgccgcgccgggggaggtggcggccttttgcagcgccctctacaggtataacaggttc +acccaacggcattcgttgactggtggtttatggctacaccctgaggggctgctgggtatcttcccccctttc +tcccctgggcatatctgggagtctgcgaacccattctgtggggaaggtaccttgtatactcgcacctggtca +acatctggcttttctagcgatttttcccctcctgaggcggccgactctgcaccggctgctacccc----ggg +gcttccct---atcccactccacctgtcagtgatat-----------------ctgggtgct---------- +---------gccaccaccc----tcagaggggt--------------ctcaggtcgatgcggtacctgtgcc +tcccg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cctctgagcccgctgggctgcctagc +tccactgagccccca-------------------------------------ccccctgtgcgtaagccacc +agcaccccc--------------------------------------gccttctcgcacccgccgtc----- +-------------------tcctctacacttatcctgacggcgctagggtgtatgcggggtcattgttcgag +tcagactgtgactggctagttaacgcctctaacccgggccaccgtcccgggggtggcctttgtcatgccttt +taccagcgtttcccagaggcgt------tctacccaactgagtttgttatgcgtgaggg---ccttgcagca +tataccctgaccccgcgccctattatccacgcagtggcccctgactatcgggccgagcagaatccaaagagg +attgaggcagcgtaccgtgaaacctgctctcgtcgcggtaccgccgcctatccacttctcggcgcaggtata +taccaggtccctgtcagtctcagttttgacgcctgggagcgtaaccatcgccacggcgatgagctttacctt +accgaacctgctgcaacc-------------------------------------------------tcgtt +cgaagataataagccggcgca--------------------------------------------------- +------------------------------------------tccagcactcactataacggaagtcacagc +cc------------gtacagcctacctagcattagacatcg------------atgctgctacagatgtcgg +ccgcgcatgt---gccggctgcactattagccgtggggttgtgcactatcagttcactgctggggtgccggg +ctcaggcaaatcaaggtccatacagcggggagaagtcgatgttgtggtcgttcccacccgggagcaccgtaa +tagctggcgccgccggggctttgaggccttcacaccccatacggcagcccgtgtcactacgggctgccgtgt +tgtgattgatgaggctccatctcttccaccacacctgctg---ctacatatgcaacgcgcctcctcggtcca +tcttctcggcgacccaaatcagattccagccattgacttcgagcacgctgggttggtccctgctattcgccc +tgagcttgcacgaacgagctggtggcatgtaacgcaccgctgtccagccgacgtatgtgagctcgtacgcgg +ggattaccctaaaatccagaccacgagtcgcgtgctacgatccttgctttggaatgag------cctgctat +cggccagaagttagtctttacgcacgccgctaaggctgctaatcctggtgcaattacggtccacgaggccca +gggcgctacctttactgagaccacaatcatagctacggccgacgccaggggtcttattcaatcatcccgggc +tcatgctatagtcgcacttacccgccatactgagaagtgcgttattttagacgcccctggtctgctgcgcga +agtcggcatatcagatgtgattgtcaacaacttt------------------------------ttcctcgc +tggtg--gggaggtgggccatcacggcccctctgtgataccccgtggtaaccttgatgagaacgttgacac- +-----tctacaggcattcgcgccatcctgccagattagtgcctaccaccagctggctgaagaattgggtcac +cgtccggctcctgttgctgctgttttacccccttgccctgaggtcgaacagggcttattgtatatgcctcaa +gagctcacagtatctgatagtgtgctggtattggagctcacggacatagtccattgtcgtatggctgcccca +agccagcggaaggctgttcttttaacactcgtcgggaggtatggccgtaagacgaagttgtacgaggcagca +cattcagatgttcgtgagtccttagctaagtttatccctactatcggacctgtccgggccaccacgtgtgag +ttatatgagctggtcgaagctatggtggagaaaggccaggatggctccgccgtcttggagcttgacctatgt +atccgtgatgtctctcgtattacattcttccagaaagactgtaataaatttacaaccggtgacaccatcgtc +cacggtaaagttggccagggcatatccgccaggagcaagaccttctgtgctctgttcggcccgtggtttcgc +gctatagaaaaagaaatactggctttgctcccgcctaatatcttttacggcgatgcctacaaggagtcggtt +tttgctgcggctgtgtccggcgcagggtcctgcatg---gtgtttgaaaatgacttctcggagttcgacagt +actcagaacaatttttccct------------------cggacttgagtgtgtggtcatggaggactgcggt +atgcctcagtggttgatcaggttgtatcatctagtccggtcagcttggattttgcaggcaccgatggagtcc +cttaaaggtttctggaagaaacattctggtgagcccggcaccctactttggaatacagtttggattatggcg +atcatagcgcattgctacgaatttcgagatatccgtgtcgcggcttttaagggggacgactcagtggtcctt +tgcagtgactatcgtcagagtcgtaatgcggccgccttgattgcaggctgtgggctcaaactgaaggtagat +tatcgtcctatcggtctatacgctggggtggtggtggccccttgtctagggacattgcccgatgtagtgcga +tttgccggtcggctatctgaaaagaactggggctccggtccggaacgtgcagagcagttgcgccttgctgtc +tgtgactttcttcgagggataacgaatgtcgcgcaagtttgtgttgacgttgtgtctcggg-------ttta +cggtgttagccttgggttagtacataaccttattggcatgctgcaggctatcgccgatggcaaggcacattt +cacagagacaatcaaacctgtgtttgatctcacaaactctattatacaacgggaagaatgaataacatgtt- +t----------------tgtgcacagcccatggg------------accgccatgcgctctagggctgttct +gttgctgttcctcatgcttctgcctatgctgcccgcgc---------------------------------- +-caccgc------ccggccagccgcctggcc------------gtcgccgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccaccgatgtcgtttcacaacccggggctggaactcgccctc +gacagccgccccg---------------ccccctcggctccgcatggcgtgaccagcccca----------- +------gcgcccctccgttgccccccgtcgtcgatctacccca---------gctggggctgcgccgctgac +ggccatgtcaccagcccctgatacagctcctgtacctgatgttgactcacgtggtgccattttgcgcgggca +gtataaattgtcaacatccccgctcacgtcatcagtcgcttctggtacaaatttggtactctatgctgctcc +actgaaccctcttttacctcttcaggatggcaccaacacccatattatggctactgaagcatccaattacgc +ccagtaccgggttgatcgagccacgatacgttaccgcccgctggtacccaatgctgtcggcggttatgccat +atctatctccttctggccccagacaacaactactcccacttctgaggatatgaactctatcacctccactga +tgttagtatccttgtccaacccggcattgcttccgagttggtcattcccagtgagcgtctccactatcgcaa +ccaaggatggcgctctgtcgagaccacgggcgtcgctgaagaggaggctacctctggccttgtaatgctctg +tattcatgggtcccccgtcaattcttacactaatacgccttacaccggtgcactggggctacttgattttgc +attagaacttgagtttaggaatctgaccgctgggaataccaacacccgtgtatcccgatataccagcacagc +ccgccaccggctgcgacgtggggccgacgggaccgccgagctcacaaccactgcggccactcgtttcatgaa +ggaccttcacttca---ccggtacgaat---ggagttggcgaggttggtcgaggtatagccctgacgttgtt +caatctcgctgacacgctgcttggcggcataccgacagaattgatttcgtcggctggaggtcaactcttcta +ctcccgccctgttgtctcagccaatggcgagccaacagttaagctatacacatctgttgagaatgcacagca +agataagggcatcactatcccgcatgatatagacctgggtgactcccgtgtagtaatccaggactatgataa +ccaacacgaacaggatcggcccaccccgtctcctgctccctcccgccctttttcagtccttcgagctaacga +cgttctgtggctttc-----------------------------cctgactgccgccgagtacgac------ +cagaccacatatgggtcgtccaccaaccccatgtatgtctcggatacggtgacattagt---caatgttgcg +actggtgctcaggctgttgcccgctctctcgactggtctaaagtcacactggacggtcgtccccttactact +at-----tcagcagtactctaagacattctatgttc-ttccgctccgcgggaagctctctttttgggaagct +ggtactactaag--gctggttacccgtataattataatactacagctagtgatcagatcttgattgagaacg +cggccggtcac------cgggtcgctat-atctacctataccactagccttgg--------------cgccg +gtcctacgtcaatttc-tgcggtcggtgtattagcaccgcattcggctcttgccgctctagaagataccgct +gatt---------atcccgctcgcg----ctcacacttttgatgatttctgcccggagtgtcgccccc---t +tggttttcagggttgtgcattccagtc--------tactatcgctgagctacagcgcct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattaa-tt----c--t--g-tct------gt +accc-cct--------tc-gcag-ttttcttttgc-tt--------------------tatt-t-------c +ttatttct----gc----------------ttttcgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------a----------------------------- +------------------------------------------------------------------------ +----------- +>KP698919.1/17195/1-7195 |Hepatitis E virus isolate SwHEVE2IT12 polyprotein (ORF1), pORF3 (ORF3), and capsid protein (ORF2) genes, complete cds +--------------------------------------------------------------ggtcggtgc- +---catggaggcccatcagttcattaaggctcctggcatcactactgccattgag---caggctgctctggc +tgcggctaactccgccttggcgaatgctgtggtggtcaggccgttcctgtcccgtactcagactgaaattct +tattaatctgatgcaaccccggcagctcgtattccgtcctgaggtcttgtggaatcatccgatccagcgggt +tatacacaatgaactagagcagta---ctgccgtgctc-gtgccggacgctgcctggaagtgggtgctcatc +caagatccattaatgacaaccccaatgttttgcatcggtgctttcttcgcccggttgggagagatgtgcagc +gctggtactccgctccgacccgcggcccagcggctaattgccgccgctccgcattacgtggtctaccccctg +tcgaccgtacttactgcttcgacgggttctcccgctgcaccttcgctgctgaaactggaattgccttatact +cattacatgacctttggcctgcggatgttgcggaggccatggcccgccatggcatgacacgcttgtatgcag +ccctccattta-ccccccgaggttttgctaccacctggtacttaccataccacttcttatttgttgattcac +gatggcgaccgcgctgtcgtaacctatgagggggacaccagtgccggctataatcatgacgtgtccattctc +cgcgcgtggatccgcacaactaagatagtcggtgatcacccgctggtcatagagagggtccgtgccattggt +tgtcattttgtgctgctcctcactgctgcccctgaaccatctcctatgccttacgtcccgtaccctcgctca +acagaggtgtatgttaggtctatatttggccctggc---------gggtcaccttctcttttcccatcagcc +t----------gctccaccaaatcca-catttcatgccgktccggtccatatttggggccggctcatgcttt +tcggcgcyrccttagacgmtcaagccttttgctgctcgcggcttatgacctatctccgtgggatcagttata +aggtgaccgtcggggcacttgttgccaacgaaggatggaacgcctcagaggatgcgctcactgctgtgatca +ctgcagcgtatctgaccatctgccaccagcgctacctccgaacccaggctatatctaagggcatgcgtcggc +tagaggtcgagcacgcccagaagtttataactaggctttatagttggctgtttgagaagtc---------cg +gccgtgactacatccccggccgtcaacttcagttttatgcacagtgtcgccgttggctctctgccggcttcc +atttagaccccagggtccttgtttttgatgaggcggtcccttgc---cgctgtaggagcttcctgaagaa-- +----ggttgccggtaagttctgctgctttatgaagtggttagggcagga------gtgcacctgtttcctag +----------------agccggctgagggcttgatcggtgactgtggc--------cacgacaatgaggcct +atgagggctctgaggtagattcagccgagcctgcccatctcgatgtttctgggacctatgcagttcatggcc +gccagcttgaggccctatacagggcgctcaacattccacacgatattgcggctcgtgcatcacgcttgacag +ctaccgtagagctcgctgctagcccaggccgtctagaatgccgtactgttcttgggaataagacctttcgca +cctcaataactgatggtgcccaccttgaggtcaatggccc------------------------cgagcagt +atgttttgacatttgatgactcccgccaagcgatgggggctgggcctcatagtcttacatatgagctcaccc +ctgctggcttgcaggttagaatatcttct-------aatggtctagactgcactgctgtctttccc---ccc +ggtggggcgccaagtgccccaccgggtgaggttgcagctttctgcagcgccctatatagatataacagattt +actcagcgacattcgctaaccggcggactgtggctacaccctgaggggctcctaggtctgtttccccctttc +tctcctgggcatctctgggagtctgcaaatcctttttgtggcgagggcacactttacactcggacttggtcc +acatctggtttctcgagtgatttctccccccctgaggcggcttttgccgctccagcccccgatgg----ggg +gctgccttcaggtaccccctcctctgtcagtgatgt-----------------ctgggtact---------- +---------tccgccgccc----tctgaggggt--------------cagtggctgcctccgcgcctgcagc +cccggt------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------------------------tagtaagcctactggcccgcctaac +cccgccatgcctaga-------------------------------------cccactgttcgtaagccacc +ctcaccgcc--------------------------------------accggctcgtacccgccggc----- +-------------------ttctttatacttatccagatggggctaaggtctatgcaggctccctgtttgag +tcagattgtgactggttggtcaatgcatccaaccctggccaccgccccggtggcggtctctgtcacgccttt +taccagcgcttcccagagtcgt------tttatccgactgatttcattatgcgcgaggg---ccttgccgcc +tacaccttgaccccacgcccgatcatccatgctgtggcccctgattatagggttgagcagaaccccaagaga +ctagaggcggcgtaccgtgagacctgttctcgcctcggtacagccgcttacccactgctggggtctgggatt +tatcaagtccctgtaggtttaagtttygaykcctgggagcgtaaccatcgcccaggcgacgagctttacctc +actgagcccgctgcagcg-------------------------------------------------tggtt +tgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------accagccttaactattactgaagacactgc +tc------------gcacggctaatctcgcgcttgaaattg------------actctgccaccgaggtggg +ccgtgcctgc---actggttgtactgttagccctgggattgttcactatcagtttactgccggggtgcctgg +ctccgggaagtctagatctatacaacaaggggacgtcgatgttgtggttgtgccaacccgtgagctccgcaa +tagctggcggcgccgtggctttgctgcatttacaccccacacggcggcccgcgttacagccggccggcgtgt +tgtgattgatgaagcgccctctcttccgccacacttgctattgctccatatgcagcgagcttcgtcggtcca +ccttctcggcgaccccaaccagatccccgccattgattttgagcatgcaggcctggtcccggcgattcgccc +cgagcttgccccaactagttggtggcatgttacacatcgttgccctgccgacgtgtgcgagctcatacgtgg +ggcttaccccaagatccaaactaccagccgtgtgatgagatctttgttttggaatgaa------cctgcagt +aggccagaagttggttttcacgcaggcagctaaggcagccaatcctggcgcaattactgttcatgaggccca +gggtgctacttttactgagaccaccatcatagccgcggcagatgccagaggccttattcagtcctcccgcgc +acatgcaattgtcgcacttacccgtcatactgaaaaatgtgtcattttggatgcccctggcttgctgcgtga +ggttggcatctctgatataagtggtaacaatttc------------------------------ttcctggc +tggcg--gtgaggtgggccaccaccgtccctccaccataccccggggtaacccagatcagaatttagatac- +-----cttgcaggcattccctccatcttgtcaaattagcgcttaccaccagctagctgaggagttaggccac +cggccagccccagttgctgctgtactaccgccctgccccgaacttgagcagggcttactctatatgccacaa +gagctcacagtgtccgatagtgttctggttttcgagctcacggacatagttcactgccgaatggcggcccct +agtcagcggaaggccgtcctttcaacactcgtcggcaggtacggtcgccgaacgaagctgtatgaggcggcg +cattccgatgtccgtgagtcattagcaaggttcatccccactatcggaccagttcaagccaccacatgtgaa +ctatatgagttagtagaagccatggttgagaagggccaggacggttctgctgtgstagagcttgatctctgc +agccgcgatgtctcccgtattacattcttccaraaggactgtaataaatttacaacgggcgagactattgcc +cacggtaaagtgggtcagggtatctcggcatggagtaagaccttttgtgctctatttggaccgtggttccgt +gccatcgagaaggagattctggccctgctcccgcctaatattttctatggtgatgcttttgaagagtcagtg +ttctctgcagccatcgctggagcaggttctagtatg---gtttttgagaacgatttctctgagtttgacagt +acccaaaataatttttctct------------------tggtctcgagtgtgttattatggaagagtgtggc +atgcctcagtggcttattcggttgtaccatttggtcaggtcagcctggactttgcaggccccgaaggagtcc +ctgaaaggtttttggaagaagcactctggtgagcctggtacactcctctggaacactgtctggaacatggcg +atcatagcgcattgctatgaatttcragayctgagcgtggcagcgttcaaaggagatgattcagtggttcta +tgcagtgactaccgccagagccgtaatgcagccaccctgattgctggttgcgggttaaaacttaaggttgat +taccgtcccatagggttgtatgcyggcattgtggtggccccaggtctcggggcactccctgatgttgtccgg +ttcgccggccggctgtctgagaagaattggggcccgggccccgagcgtgctgagcagttgcgtttggcagtt +tgtgatttcctccgaaggttgacgaatgttgcgcaggtctgtgttgatgttgtgtcccgtg-------ttta +tgargttagtcctgggctggtacataaccttattggcatgctacagactattgccgatgggaagggtcattt +tactgaaactgttaaacctgtacttgatctcacaaattctattacacagaggttggaatgaataacatgtt- +g----------------tgtgcatcgcccatggg------------atcaccatgcgccctcgggctgttct +gctgctgttcctcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcaacggcggtac +cggcggtg-gtttctggggtgacagg--attgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgctgacgtcgtatcacaacccggggctggagctcgccctc +gacagccgccccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctacccca---------gctggggctgcgccgttgac +tgctgtttcccctgcgcctgatacggctccggtccctgatgttgactctcgtggtgctattctgcgccgcca +gtacaacttatctacttctcctttgacctcctctgttgcttctggtactagccttgtcctgtatgctgcccc +gcttaatcctctcttacccctccaagatggcaccaacactcacatcatggcgactgaggcgtctaattacgc +ccagtaccgggttgttcgggctacaatccgctaccgccctctggtgccgaatgctgttggcggctatgcaat +ttctatctccttctggcctcagaccacaaccacccctacctctgttgatatgaattccatcacatctactga +tgttaggatcttagttcagcctggtgtggcctctgagttggttatcccgagtgagcgcctccattatcgtaa +ccagggttggcgctctgttgagacctcgggtgtggccgaggaggaggcgacttcaggtttggttatgctctg +cattcatggctctcctgtaaattyctacactaatacgccctacactggagctttgggccttcttgactttgc +acttgagcttgagttcaggaatttgacccctgggaacaccaatacccgtgtctcccggtacactagcacggc +tcgtcaccgcttgcgccgtggcgctgatggaactgctgagctcacgaccactgcggctacgcgtttcatgaa +ggacctgcacttca---ctgggacgaat---ggcgtcggtgaggtgggccgtggcatagccctaactttatt +caatcttgctgacacacttctcggcggcttgccgacagaattgatttcgtcggccggaggtcagctctttta +ctcccgcccagttgtctcagccaatggcgagccggctgttaaattgtacacttccgtcgagaatgcacagca +agacaagggtattgccataccccatgatatagatctcggggattcccgcgtggttattcaggattatgacaa +ccagcatgagcaggataggcctaccccttcgccggccccctctcgccctttttctgtcctccgtgctaatga +cgttctgtggctttc-----------------------------tcttactgctgctgagtatgac------ +caaaccacttatggttcgtcgaccaatcctatgtatgtttcagacactgtaacttttgt---caatgtggct +acgggagcccaagcagtcgcccgctcccttgactggtctaaggtcaccctggacggtcgaccccttaccact +at-----ccaacagtattctaagacattttatgtgc-tcccactccgtgggaagctttcattctgggaggct +ggcactactaag--gccgggtatccctacaattataacaccactgctagtgatcagattctgatagagaatg +cagccggccac------cgcgttgctat-atccacctataccactagccttgg--------------agccg +gcccagtgtctgtttc-tgcagtcggcgttcttgccccccattctgctttagctgtgctcgaggatactatt +gatt---------accccgctcgcg----cccacacttttgatgatttttgccctgagtgccgcaacc---t +tggcctacagggttgtgctttccaatc--------tactattgctgaacttcagcgcct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-ttc---ct-tttt----------gt +gccc-cct--------tc-taga-tc-ct----cc-tt-tt-------------------ta-t-------t +tttttctt----tct--------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>KF736234.1/17234/1-7234 |Hepatitis E virus isolate CHNQHYak27, complete genome +----------------------------------ca-cgtatg-------------t-----ggtcgacgc- +---catggaggcccaccagttcataaaggctcctggcgtcactactgctattgag---caggcagctctagc +agcggccaactccgccttggcgaatgctgtggtggttcggccttttctatcccggctacagacagagatact +tattaacctgatgcagccccggcagcttgtctttcggcctgaggtcttgtggaaccacccaattcagcgtgt +gatccacaacgagcacgaacagta---ctgtcgagctc-gagccggccgctgccttgaagtgggtgcccacc +cgcgatccatcaatgacaatcctaacgtcctccaccgctgcttcttgaaacctgttggccgcgacgtccagc +ggtggtatactgcccccacccgtggccctgcagcgaactgccgccggtcggccctccgtgggcttccacctg +ttgaccggacgtattgttttgacggcttctccggttgtacgtttgctgctgagacgggggttgcactatact +cattgcacgatctgtggcctgccgatgttgccgaggctatggcccgccatggcatgacccggttgtatgcag +ccctccaccttccccccagaagtgctgcttccccc-gggacttatcataccacctcataccttctcatccat +gatggcgatcgtgcagtaatcacatatgaaggggattcgagtgccgggtataatcatgatgtgtctattctc +cgtgcctggatccgtactactaaggtcaccggtgattacccgctagtgattgagcgggtccgggcagtaggc +tgtcattttgtgctccttctcacagctgcacctgagccgtcgccaatgccctatgttccataccctcgttct +accgaggtctatgtccggtccatcttccgtcacggc---------ggctccccgtctctcttcccatctgcc +t----------gctctactaaatcca-catttcatgccgtccctgtgcacatatgggacaggcttatgctct +tcggcgcgaccctcgacgaccaggccttctgctgttcgaggctaatgacatacctccgtggcattagttata +aagtcacggtcggcgctcttggcgccaacgagggttggaatgcctccgaagatgcactgactgctgtgatta +ctgccgcttatctcactatttgccatcagagatatctccgcacacaggccatttcgaaaggaatgaagagac +tggagcttgrgcatgcgcaaaagttcataacacgcctttatagctggttgtttgaaaagtc---------tg +gccgtgattacatccctggccgtcagttgcagttttatgcccaatgtcgccgatggttatctgccggcttcc +accttgaccctcgtgtgctcgttttcgatgaggcggccccttgc---cgctgtcgtagcttcctccgcaa-- +----ggctgctcataaattttgctgcttcatgcggtggctcgggcagga------ctgtacctgcttcctcc +----------------agcccgttgaggggagggtcggcgagcaaggt--------tatgataatgaagcgt +ttgaaggatcggatgttgatcccgctgaggaggccattgtgaatatttctggatcttacattgtcaccggta +gccagctaccgcccttttatcaggcgctcggcatcccttctgaccttgctgcccgagccagtcggcttaccg +ctaccgttgaagtgacggatgccgatggtcgccttatctgtgaaactactataggcaacaagacttttaaaa +cagttcttactgatggtgcccagttagaggctaatgggcc------------------------agagcaat +atgtgccgtcgtttgacccggccaagcagaccatggctgctggtccacatagtcttagctatgccttgacat +ctactggccttgaggcgcgtgttgtatcc-------gccggacttgactgcaaggctgttttccca---tct +ggtgtagcgaccccctccacccctggggaggcgtccgccatttgttcagccttgtataggttcaatcgctgt +gtccagcggcattcccttatcgggggcctttggtaccaccctgaggggctaattggcttgtttccgccgttc +tctcctggccacgcttgggagtccgccaatcctttttgtggggagagtaccctctacacccggacttggtca +gtgtcagggttctctagctgcttttctccgtttgagccccgtgccccggatttgtcaccgcctgtt---gag +actgacat----------gcctgttgctattaatgt-tccaccc---------ccaaccatc-----tctgc +actgcctcagcccccagcc----tccgtacggg---cgg--------------------ccccttcactaaa +cctag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctgatagcggtgctgtttcggcccta +tcggacgccgccgtt---------------gcc-------------------catccggcgccagtgcagcc +cgtaaccca--------------------------------------actatccgggccccgccggcg---- +-----------------gctacttcatacttaccctgatggctcaaaggcgtatgccgtctccctttttgag +tctgagtgtacttggctggttaatgcatccaaccctggccaccgtcccggcggtggtctatgccatgcattc +taccaacgcttcccagagtcat------ttgaccccgccgagttcgtcatgtctgacgg---ccttgcggct +tataccctcactccccggcctattatccatgctgtcgcccccgattaccgaatagaacataaccctaaaagg +cttgacgccgcttaccgggagacgtgctcccgccgtgggacggctgcttaccccctgctcggcgccggtata +tacaaagtgcctgttgggctgagttttgatgcctgggaacgtaaccatcgacgtggcgacgagctgtatctt +actgagccagccatagct-------------------------------------------------tggtt +tgaagccaaccggcctgctct--------------------------------------------------- +------------------------------------------ccctgcccttactattactgaggacacggc +ac------------gcacagcaaatttggcgctggagctgg------------actcagctaccgaggtcgg +ccgggcatgt---gctggctgtcgtgttgagcctggcgtcgttcattaccaatttacggcaggtgtgcccgg +ctccggtaagtcccgttcagttcagcagggtgaggtggatgtggtggtggtaccaactcgtgagttgcgtaa +ttcgtggcggcgccgcgggttcgcagcctacacacctcatactgcggcccgtgtcacccgtggccgcaggat +tgttattgatgaggccccatcgcttccaccgcatctacttttactccatatgcagagggcttcgtcagtcca +tcttcttggtgaccccaaccagatccctgccattgattttgagcatgctggccttgttccggcgatccggcc +ygagcttgtcccaacgaagtggtggcatcttacacacagatgtcctgccgatgtctgcgagctgatccgtgg +cgcatacccaaaaatccagaccgcaagccgtgtcctccgctccttattctggggggag------cccccggt +gggtcagaagttagtatttacccaggcggcaaaggccgccaaccctggtgcaattacagtccatgaggccca +gggcgccacatttactgaaactactattattgccacagcagatgctcgcgggctaattcaatcctccagggc +ccacgctatcgtcgccctgacgcgccacacggagaagtgcgtggttgttgacgcccctgggctccttcgtga +ggtcggcatttccgatgctatcgtcaataatttc------------------------------ttcctctc +tggcg--gccagattggtcaacaccgcccgtcagttatcccacgcggcactgtcgacagcaacgttgacac- +-----gcttgatgcatttccaccctcctgccaattcagtgcttaccaccagcttgcggaggagctaggccat +cgaccggccccaatcgctgctgtcctgcccccttgcccggagcttgagcaaggccttctttatatgcctcag +gaattggctacgtctgatagtgtgcttacttttgaactggcagacatagtgcactgccgtatggcggcacct +agccagcgtaaagctgtcctgtccacccttgtcggccggtacggccgccgtacgaagctgtatgaagccgct +catacggatgtccgcggctccctaaaccacttcatccctgagcttagccctattagtgtcaccacttgtgag +ctttatgagcttgtagaggctatggtggagaagggccaggatggctccgctgtcctagagcttgatttgtgt +agccgtgatgtgtctcgtataacattcattcagaaggattgtaataaattcacaacaggtgagacgatagca +cacggcaaagttgggcagggggtatccgcgtggagcaagaccttctgtgccctgtttggtccatggttccgc +gctattgagaaggagatccttgcgtcacttgctcctaatgtattctacggtgacgcatatgaagatacagtt +ctggctgccgccgtggctggggctcctggctgcaag---gtctttgagaacgacttctctgagttcgatagc +actcaaaataattttccact------------------tgggttggagtgtataatcatggaggagtgtggc +atgccacagtggatgatccgactttatcatcttgtccgctctgcctgggtgctgcaggccccaaaagagtcc +ctacgagggttttggaagaagcactcaggtgagcctggtaccctgctgtggaacactgtttggaacatggcg +gttattgcacactgctatgagtttcgtgatctgaaagttgcagcatttaagggggatgactctgtcgtgctc +tgcagtgactaccggcagagccgcaatgcggccgcattaattgctggctgtgggctgaaacttaaggtggac +tttagacccattggattgtatgccggtgttgttgtggccccgggtctcgggaccctccctgatgttgttagg +tttgctgggcggctctcagagaaaaactgggggccgggctcggagagggcagaacagctacggctggctgtc +tgtgattttctgcgaaagttaacgaatgtggcccaggtttgtgtggatgttgtttcgcggg-------tcta +tggtgttagccccggcttagtacataacctgattggaatgcttcagactattgctgatggcaaggcacattt +tactgagacaattaaacctgttctagaccttactagttccattatataccgggtgggatgaataacatgttc +t----------------cttgctctgtgcatggag---------atgccaccatgcgctctcgggctcttct +ctttttgctcctcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gtcgccgcgggcg-gcgcagcagcggtac +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgcatctgacatatcaaccgccgccggggctggagctccccctc +ggcagccggcccg---------------cccactcggttccgcttggcgtgaccaatccca----------- +------gcgccccgccgcttcctcccgccgtcgatctgcccca---------gctggggcttcgccgttgac +ggccgtggctccaggccccgacagcgctccagttcctgatattgattctcgcggcgccatattacgtcgcca +gtataatttatcaacatctccgcttacgtccactattgctactggtactaatcttgtcttgtatgccgcccc +gctgagccccttgctcccgcttcaggatggaactaacactcatattatggccactgaggcttcaaattatgc +ccagtaccgcgttgcccgtgctactatccggtaccgcccgttggtgccgtatgctgttggtgggtacgctat +ctccatctctttttggccccagacaacaactactccgacatctgttgatatgaactctatcacctccactga +tgttcgaattcttgtccaacccggtatcgcctctgaactcgtgatccctagtgagcgcctgcactatcgcaa +tcaaggttggcgttcggttgagacctctggtgttgcggaggaggaggcgacttctggtcttgttatgctttg +catccacggatcacctgtgaactcctataccaatacgccttatactggtgcacttggcttgcttgattttcc +gctcgagctcgagtttcgcaatctaacgcctggcaacacgaatacgcgtgtctcccgttattcgagcagtgc +gcgtcacaagctgcgccgagggcctgatggcactgctgaattaaccaccactgcagctacccgctttatcat +agatcttcatttta---cagggactaat---ggtgttggtgaggttggtcgtggcatagcgttaaccctgta +taaccttgctgacacgcatctcggtgggctaccgacagaattgatttcgtcggctggtggacaattgttcta +ttctcgccccgttgtctcagccaatggcgagccgacagtgaaactttacacttcagtcgagaatgcccagca +ggataagggtatagctatcccccacgttattgatcttggtgagtcccgagttgtcatccaggactatgataa +ccaacacgagcaggaccgccccactcgctctccggccccttcccgccccttctctgtcctccgtgctaatga +cgtgctctggctgtc-----------------------------ccttacagctgctgagtaccac------ +cagactacctatggctcttctaccaatcctatgtatgtttctgacactgtgacatttgt---taatgtagct +actggtgcacagggagttaaccgctctctcgactggtctaaggttactcttgatgggcgcccacttgctact +at-----tcagcagtattctaaaacattctatgtct-tgcctctccgcggtaaactatccttctgggaggct +ggtaccaccaag--gctggttacccttataattacaacactactgctagtgacgagatcttaattgagaatg +cggctggtcac------cgcgtctgtat-ttcaacttatactactaacctcgg--------------ctccg +gccccgtctctatttc-tgctgtcggtgtccttgcacctcactctgttctggccgccttggaggataccgtt +gact---------acgccgctcgtg----ctcacacttttgatgatttctgccctgagtgccgtacac---t +cggtcttcagggctgtgcatttcagtc--------aactgttgctgagctacagcgtct------------- +--------taaaatgaaggtgggtaaaactcgggagtattgattta-tt----tt-gttt----------gt +gcct-ccc--------tt------ctgct--ttgt-tt--cttt--------------tatt-t-------t +tcttttct----gcg----------------ttccgcgctccctg---------------------a----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>KJ701409.1/17110/1-7110 |Hepatitis E virus isolate AB_7110 polyprotein and ORF3 protein genes, complete cds; and capsid gene, partial cds +--------------------------------------------------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcatcactactgcyattgag---caagstgctctggc +ygcggccaattctgccytggcgaatgctgtggtggttcggccgtttytatctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagctggtttttcgacctgaagtgctctggaatcatcctatccaacgggt +tatccataatgaattagaacagta---ctgccgggcca-gggcaggtcgctgtttagaggttggggcccacc +caagatccatcaatgataacccgaatgttctgcaccgctgcttyctacgaccagtcggtagagaygttcagc +gctggtactcagcccctacccgtggccctgcggccaattgccgccgctctgctttgcgtggccttccccccg +ttgatcgcacctactgttttgatgggttctctcgctgctcatttgctgcagagactggggttgccctctatt +cactgcatgacctctggccggccgatgttgcagaggccatggcccgacacgggatgacacgcttatatgctg +cactacatctt-ccccctgaagtattactaccacctggtacctaccacacaacttcataccttcttattcac +gacggcgatcgtgccgttgtgacttatgagggtgacactagtgcaggttacaaccatgatgtttccatactc +cgtgcatggatccgcacaactaagatagttggcgatcatccgctggtgatagagcgtgtgcgggcgatcggc +tgccacttcgtgctgctgctcactgcagctcctgagccgtcaccgatgccttatgttccatacccccggtcg +acagaggtctatgttcgctccatattcggccctggc---------gggtccccgtctttgtttccatcagcc +t----------gctccacaaaatcca-catttcatgccgtcccggttcacatttgggaccggctcatgctct +ttggtgctaccctggacgaccaggcgttctgctgctcacggcttatgacttaccttcgtgggattagttata +aggttactgtgggcgccctcgttgctaatgaagggtggaacgcttcggaggacgctcttaccgctgtcatca +ccgcagcgtacctgaccatctgtcaccagcgttacctccgcactcaagctatatccaaaggcatgcgtcggc +tggaggttgagcatgctcaaaaattcattacaagactttatagttggctgttcgagaagtc---------tg +gccgtgactatatccctggccgccagctccagttctatgcacagtgccgccgctggttatcggcgggtttcc +acctcgatccaagagtgcttgtttttgatgagtctgcgccctgc---cgttgtaggacgtttcttaagaa-- +----ggtagcaggtaagttctgctgttttatgaagtggctgggacagga------gtgcacctgctttctgg +----------------aaccagctgaagggctagtcggtgaccacggt--------cacgataatgaagcct +atgagggttccgaggtcgaccaggccgagcccgcccatcttgatgtttctgggacttataccgtccatgggc +gccaacttgaggccttgtacagggcgcttaacatcccgcacgatattgccgctcgagcctcccgtttaaccg +ccactgttgaacttactgcaggtccagaccgtttggagtgccgaactgtgctcgggaataagaccttccgga +caacggtggttgatggcgcccatcttgaggcgaatggccc------------------------cgagcagt +atgtcctttcgtttgacgcctcctgccagtctatgggggccgggccgcataacctcacctatgagctcactc +ctgctggcttgcaggttaagatttcgtct-------aatggcctggattgcactgcaacatttctc---ccg +ggcggggcccctagcgcagatccgggggaggtggcagctttttgcagtgccctctataggtacaacaggttt +acccagcgccattcgcttacaggcggcttgtggctacatcctgaggggctattgggcatcttccctcccttc +tcccccgggcatctttgggagtcygctaaycctttttgtggggagggaaccttgtacacccgkacttggtcm +acatctggtttttctagtgacttttcccccccggaggcagctgccgctgcgccagctgctgccat----ggg +gttacccc---accytacgcccccggtcagtgacat-----------------tcgggtgtt---------- +---------gccgccaccc----tctgaagagt--------------ctcrggtygatgcggcgcctgtccc +tcctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------yttcygagcctgttcaaccgcccggc +cccgctaggccaaag-------------------------------------gcccccgtgcgtaagccacc +aacaccgcc--------------------------------------acctccgcscacccgcsgyc----- +-------------------ttywctacacytatccggatggggcaaaggtgtatgcggggtcattgtttgag +tcagactgtgattggctggttaatgcatcgaaccccggccatcgtcccggaggtggcctttgtcatgctttt +taccaacgctaccccgagtctt------tttactcaactgagttcattatgcgtgacgg---ccttgccgca +tacactttaactcctcggcctatcatccacgcagtcgctcccgattatagggttgagcagaacccgaagagg +cttgaggcagcatatcgagagacctgctcccgccgcggtaccgctgcttacccactcctcggctcgggcata +taccaagttcccgtcagcctcagctttgaygcttgggagcgtaaccaccgccccggggatgagctttacctg +accgaccttgccgctacc-------------------------------------------------tggtt +cgaggccaacaagccagcaca--------------------------------------------------- +------------------------------------------accggccctcacaataacagaagatacagc +tc------------gcacagccaatctagcactagagatcg------------acgctgctacggaggtcgg +ccgggcttgt---gccggttgcacagttagtcctgggattgtgcattatcaatttaccgccggggttccagg +ttcggggaagtcgcggtctatacagcaaggggatgtcgatgtggtggtcgtccccactcgggagcttcggaa +tagttggcgccgccggggttttgcagctttcacacctcacacggcggcccgtgttaccacgggccgtcgtgt +tgtgattgatgaggccccatcccttccaccgcacttgctgcttttacacatgcagcgggcctcgtcggtcca +tcttctcggcgacccaaatcagatccctgctatagactttgagcatgccggcctggtccccgcaatacgtcc +cgagcttgcacccactagttggtggcatgtcactcatcgctgtcctgctgatgtgtgcgagcttatacgcgg +ggcctatcccaaaatccagactactagccgcgtgctgcggtctttatactggaatgag------cccgccat +tggccagaagttagttttcacacaggccgctaaggctgccaaccctggcgcgattacagtccatgaggccca +gggcgccacttttacggagactacaatcatagccacggccgatgccagggggctcattcaatcttcccgagc +tcacgccatagtcgcactcacccgccacacagagaagtgcgttatcctcgatgcccccggcctgttacgtga +ggttggtatatctgatataattgtcaacaatttc------------------------------ttcctcgc +tggtg--gggaagtgggccaccaccgcccctctgtgataccccgcggcagtcctgaccagaacctcgcgac- +-----actacaggcctttccaccttcctgtcagatcagtgcttatcatcagctagctgaggagctgggccac +cgcccggcccctgtcgctgccgtcctgcccccctgccccgaacttgagcagggcttgctgtacatgccacaa +gagctcacggtgtctgatagcgtgctggttttygagctcacggacatagtccattgccggatggccgcccct +agccagcggaaggccgtcctgtcgacgcttgtgggtaggtatggccgccggactaagctgtatgaggcggct +caytctgatgttcgtgagtctctggcaagatttatccccaccatcgggcccgttcaggctacwacgtgygag +ctgtacgaattggttgaggccatggtggagaagggtcaggacggctctgccgtactcgagcttgacctttgt +aatcgcgatgtatcgcgtattacattctttcagaaagaytgcaacaagtttaccacaggggagaccatcgcc +cacggtaaggtcggtcagggcatttcggcytggagyaagaccttctgtgctctctttggcccgtggttccgt +gctattgaaaaagaaatattggccttgctcccgmccaatatcttctacggcgatgcatatgaagagtctgtg +ttcgctgctgctgtgtcyggggcwggttcatgcatg---gtatttgagaatgatttttcakagtttgatagt +acycaaaataatttttctct------------------tggcctcgaatgygtagtcatggaggaatgtggc +atgccccagtggttgatycggttgtrccacttggtycggtcagcctggattttacaggcgccgaaggagtct +cttaaaggattytggaagaarcaytcyggtgagcccggcaccctcctttggaacaccgtttggaatatggyg +atwatagcacattgctatgaatttcgtgattttagggttgccgccttcaagggagatgattcggtggtcctc +tgcagcgactaccgtcaaagtcgcaatgcagcggccctgattgcgggttgcgggctcaagttaaaggttgac +taccgccctattgggttgtatgccggcgtggtggtggcccccggcctggggacgctacctgatgtggtgcgc +tttgccggccggctgtctgagaagaactggggccctgggccggagcgggccgagcagttgcgcctcgctgtt +tgtgattttcttcgagggctcacgaatgttgcgcaggtatgtgttgatgttgtatcccgag-------ttta +tggagttagccccgggctggtacataaccttattggcatgttgcaaaccattgctgacggcaaggcccactt +tacagagactgttaaacctgtgcttgaccttacgaactccatcatacagcgggtggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcrccatgcgccctagggctgttct +gttgctgttcctcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccga------ccggccagccgtytggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gctgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgatgtcatttcgcaacccggggctggaactcgccctc +gacagccaccccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgttgccccacgtcgtcgatctgcccca---------actggggctgcgccgctgac +tgctatatcacctgcccctgatacggcccctgtgcctgatgttgattcgcgtggcgctatattgcggcgcca +gtacaatttatctacatccccactcacatcatctgttgcttcgggtactaatttggttctttatgccgcccc +gctaaatcccttgttaccccttcaggatggcaccaacactcacatcatggctactgaggcatctaattatgc +ycagtaycgrgttgyccgagctacgatccgytacaggccgctggtgccgaatgccgtcggcggctatgcaat +ctccatctcattctggcctcagactactaccacccccacgtctgttgacatgaactctattacctccactga +tgttaggatcctagttcagcccggtatcgcytccgagttagttattcckagcgagcgcctccactatcgcaa +tcaaggttggcgctctgtggagacctcgggtgtggctgaggaggaggccacttctggtttggtgatgctytg +yatmcatggytcccctgttaattcctayaccaataccccctatactggagcgcttgggctccttgattttgc +tttagagcttgagtttaggaacttaacacccgggaacactaacacccgtgtttcccggtacacaagcacagc +ccgtcatcggctgcgccgcggtgctgatggcaccgctgagcttaccaccacagcagccacacgtttcatgaa +ggacttgcatttca---ccggtacgaat---ggggtyggygaggtgggccgtggtattgctcttacactctt +taatcttgstgacacgctccttggtggtctgccgacagaattaatttcgtcggctgggggacagttgtttta +ttcccgccccgtcgtctcagccaatggcgagccggctgtcaagttatatacatctgtagagaatgcscagca +agatmaagggattgctattccacatgacatagacttaggtgactctcgtgtggttattcaagattatgataa +tcagcatgagcaggatcgacccaccccttcacctgccccgtctcgccctttttcggttcttcgtgctaatga +tgttttatggctctc-----------------------------tctyaccgcygccgaatacgac------ +cagactacatatgggtcgtccaccaacccaatgtatgtctcagatactgttacatttgt---caacgtggct +acaggagcccaggctgtcgcccgttctcttgattggtctaaggttactctagatggccgcccccttactact +at-----tcagcaatactctaaaacattttatgttc-tcccgctccgcgggaagctatccttttgggaggct +gggacaactaaa--gctggttacccttataattatgacacgacagctagtgaccagattttaattgaaaatg +cggctggtcac------cgtgttgccat-ctctacttatactcccagccttgg--------------tgctg +gccctgtgtcagtctc-tgcagtcggtgtgttagccccgcattcggctcttgcagttcttgaggatactact +gact---------gccctgctcgcg----cccacacttatgatgacttctgtccggagtgtcgcgccc---t +tggcttgcagggttgtgccttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaa------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>KC692453.1/17301/1-7301 |Hepatitis E virus strain CHYTsHEV01, complete genome +----------------------------gcagacca-cgtatg-------------t-----ggtcgacgc- +---catggaggcccatcagttcataaaggctcctggcgtcactactgctattgag---caggcagctctagc +agcggccaactctgccttggcgaatgctgtggtggttcggccctttttatcccgccaacagacagagatact +aattaacttgatgcagccccggcagcttgtttttcggcctgaggtcctgtggaaccaccccatccaacgtgt +gatccataatgagctcgagcaata---ttgtcgagctc-gtgctggtcgctgccttgaagtgggtgcccacc +cacgttcaattaatgacaaccctaatgttttgcatcgttgttttcttaaaccagttggccgtgatgttcagc +ggtggtatactgcccccacccgtggccctgcggcaaattgtcgtcggtccgctcttcgtgggcttccacctg +ttgaccgtacatattgttttgacggtttctctggctgcacttttgctgccgagacaggtattgccctctatt +cactgcatgacctatggcccgctgatgtcgccgaggcgatggcccgccatggaatgacccggctctatgcag +ccctccatctc-ccccctgaggtgctattaccccctggcacataccacaccacctcatatcttttaatccat +gatggggatcgcgcagtgatcacatacgagggggactccagtgcaggatataaccatgatgtgtccattctg +cgggcatggatccgtaccactaaggtcaccggtgatcatccgctggtgattgagcgagtccgagcggtgggg +tgccattttgtccttctcctcacagctgcccccgaaccgtcgccgatgccttatgttccatacccacgctca +actgaggtctatgtccggtccatttttggccctggt---------ggctcgccatccctctttccatctgcc +t----------gctctactaagtcaa-catttcatgccgtccctgtgcacatatgggataggcttatgcttt +ttggtgcgacccttgatgaccaagccttctgctgctccaggctcatgacgtacctccgtggcattagttata +aggttacggtaggtgctctcgttgccaatgagggttggaatgcttctgaggatgcgctgactgctgtaatta +ctgcggcctatcttactatttgccatcagaggtacctccgtacgcaggccatttcgaaggggatgaaaaggc +tggagctcgagcacgcgcagaagtttataacacgcctttacagctggttatttgaaaagtc---------cg +ggcgtgactatatccccggccgccaactgcagttttatgcccagtgccgccggtggctatctgcaggtttcc +accttgatcctcgtgtgctcgtttttgatgaagctgccccttgc---cgctgccggagctttctgcgcaa-- +----agccgcccacaagttttgctgcttcatgcggtggctgggtcaaga------ctgcacttgtttccttg +----------------agcccattgaggggagggttggcgaacaaggt--------tatgataatgaggcat +tcgaggggtcggatgttgaccctgcggaggaggccaccgtgagcattgccgggtcatatattgttactggcc +gtcagctgcagcctctataccaagcgcttggcataccatctgatctcgccgcacgtgccggtcggcttgccg +ctaccgttgaagtttcagatgcagagggccgtcttacctgcaagaccatcttgggcaacaaaacctttttat +cggtatttactgatggcgctcagttggaggccaacgggcc------------------------agagcagt +atgttttatcatttgatttgactaaacaagctatggccgccggcacgcatagtcttagttacaccctaacat +cagaaggccttgaggtgcatattatttct-------gccgggctcgattgcaaggctgttttccca---cct +ggtgtcgcaaccccctctgcccctggggaggtgtctgctttttgttcagctctttacaggtttaaccgctat +gtccagcggcattcccttatcggaggtttgtggtattaccctgagagcttagttggcttgttcccaccgttc +tcacccggccatagctgggagtctactaatcctttttgcggtgagagcactctttatactcgcacatggtcc +gtgtcgggtttttccagctgtttctctcccttcgaacctcgtgcaccggagttgccaccttctggt---gac +attgatat----------atctgtaggtgctgatac-cccgcca---------ccggttccc-----cttgc +acagactcagccccctact----cccagttatg---tgg--------------------tgcccccgccaga +tttgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttgatggtggtgctggccttggtttg +actagcgcctctgtg---------------gtg-------------------cctccggcacccgtgcagcc +tgtaaccca--------------------------------------gc---ccgggccccgtcgacg---- +-----------------actgctccacacttatcctgacggctcgaaggtgtatgccggatctctttttgag +tccgagtgcacatggctggttaatgcctctaacccgggccaccgtcccggcggcggcctctgccatgcattt +taccagcggttcccagagtcct------tcgaccccgctgaatttatcatgtccgacgg---gcttgcagcc +tataccctgacgcctcggcccataatccacgctgtcgctcctgactatcgggttgaacataaccctaagcga +cttgaggccgcctaccgggagacgtgttctcgccgcgggacagcagcttatcccctgctcggcgccggtata +tacaaggtccctgtcgggctgagctttgatgcctgggaacgtaaccaccgacctggggacgagttgtacctg +actgagccggctatagcc-------------------------------------------------tggtt +tgaagccaaccggcctaccct--------------------------------------------------- +------------------------------------------tcccgctctgaccatcactgaggacacggc +gc------------gcacggcgaacctagcattggagctgg------------atgcggccaccgaggtcgg +ccgggcgtgc---gctggttgtcgtgttgaacctggtgttgttcattatcagtttacagctggtgtccctgg +ctctggcaaatcccggtcaatccaacagggagatgttgacgtaatagtggtgccaacccgtgagttacgtaa +ctcgtggcgccgccgcgggtttgcagcctacacgccccataccgcagctcgtgtcacccgtggccgtagagt +tgttattgacgaggccccttcactcccgccacacttacttttgctgcacatgcagcgggcctcttcagtcca +tctccttggtgaccctaaccaaatccctgctattgattttgagcatgccggtctcgttccagcaatccggcc +tgagctggttccaactaagtggtggcatcttacccataggtgccctgcggacgtctgtgagctgattcgtgg +tgcatacccaaagatccaaactgcgagccgtgtcctccgctctttgttttggggggag------ccccctgt +gggccagaagctggtattcacccaagcggccaaggctgctaaccctggtgcaattacagttcatgaagccca +gggcgcgacatttactgagactacgatcatcgccacggcggatgctcgcgggctgattcagtcctctagggc +tcatgccattgtggccctgactcgacacacggagaagtgtgtggtagttgatgccccagggcttctccgtga +ggtaggtatctccgatgccattgtcaataatttc------------------------------ttccttac +tggcg--gcgagattggtcagcaccgcccgtcagttgtaccccgtggtactattagcagcaacgttgatac- +-----gcttgatgcatttcccccttcttgtcagtttagcgcgtaccaccagctggccgaagagcttggccac +cgacccgcgccgattgctgctgtcctgcccccctgcccagagcttgaacagggcttgctttatatgcctcag +gagctaacaacatcggacagtgttctcacctttgaactgacggacattgtgcattgccgtatggcagcaccc +agtcagcgtaaggcggtcctgtcgacccttgtcggcaggtacggccgtcgtacgaagctgtatgaggctgcc +catgcagatgtccgcgggtccctgaaccactttattcctgagctcggccctattaatgtcaccacctgcgag +ctctatgagcttgtagaggctatggtagaaaagggccaagacggctctgcagttctggagcttgacctatgt +aaccgtgatgtgtcccggataaccttctttcagaaagactgcaataaatttacaacgggtgagacgatagcg +catggcaaagtcgggcagggcatatctgcgtggagcaagaccttctgcgctttatttggtccgtggttccgc +gctattgaaaaggagattttggcagcgcttgcacccaatatcttttatggtgatgcttatgaggacacagtt +ttggccgctgctgttgcaggcgccaccggctctaag---gtctttgagaacgatttctctgaatttgatagc +acccagaataacttttcact------------------cgggcttgagtgcataattatggaggagtgtggc +atgccacaatggatggtgcgactttaccatcttgttcgctccgcctgggtcttgcaggccccaaaagagtcc +ctgcgcggcttttggaagaagcactctggtgagcctggcaccctgctgtggaataccgtctggaacatggcg +gttatagcacactgttatgagttccgtgaccttaaagtcgccgcattcaaaggggatgactctgttgtgctc +tgcagcgattatcggcagagtcgtgatgcggccgctttaatcgctgggtgtgggctaaaacttaaggtggat +tttaggcctattgggctatatgctggtgttgttgtggctccgggtcttgggaccctccctgatgttgtcagg +tttgccgggcggctctcagagaagaactgggggccaggcccggagaggatggagcagcttcggctagccgtt +tgtgactttctgcgaaagctaacgaatgtggctcaggtttgtgtggatgttgtctcgcagg-------tcta +tggtgttagccccggcttggtacataacctgataggaatgcttcaaactatcgcggatggcaaagcgcactt +caccgagacgatcaagcccgttcttgaccttactaattctataataagtcgggtggaatgaataacatgttc +t----------------tttgctctctgcatggcg---------atgccaccatgcgctctcgggctcttct +gtttttgctcctcctgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gtcgtcgtgggcg-gcgcaacggcagtgc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgcatctgacatttcagccaccgccggggctggagctcgccctc +gccaaccagcccg---------------cccactcggctccgcttggcgtgaccaatccca----------- +------gcgctccgccgctcccacccgtcgtcgacctacccca---------gctggggcttcgccgttgac +ggctgtagctccggcccctgacaccgctccggtccctgacgttgattcgcgtggcgctatattgcgccgtca +gtataatttgtccacgtctccactcacatctaccattgccactgggaccaatcttgtgctatatgctgcccc +tcttagccctctactcccactccaggatggcaccaacactcatattatggccactgaggcctcaaattacgc +ccagtatcgtgttgtccgtgccaccattcggtatcgtcctttggtgccgaatgctgttggtgggtatgctat +atctatctctttctggccccaaacaactaccaccccgacgtccgtggatatgaactctatcacctccactga +tgtccgtatccttgtccaacccggtatagcctctgagttggtgattcccagtgagcgcttgcattatcgtaa +ccagggttggcgctcggttgagacctctggcgttgctgaggaggaggctacttccggtcttgttatgctttg +tatacatggatcacctgtgaactcctacactaatacaccttacactggtgctctcggcttgctcgattttgc +gcttgaacttgagtttcgtaatttgacacctggcaacacaaacacgcgcgtttctcgttattcgagtggtgc +gcgccataaactgcgccgaggggccgacggcactgctgagttaactactactgctgctacacggtttatgaa +ggatcttcatttta---cagggactaat---ggcgttggtgaggtcggtcgtgggatagcgcttaccttgtt +taaccttgctgacacacttctcggcgggctcccgacagaattgatttcgtcggctggtggccagttgtttta +ttcccgccccgtcgtctcagccaatggcgagccgacagtgaaactttacacctcagtcgagaatgcccagca +ggataaggggatcgctatcccacatgatattgatcttggtgagtcccgagttgttattcaagattatgacaa +tcaacatgagcaagaccgccccactccttctcctgccccctctcgccctttctctgtgcttcgtgctaatga +tgtactttggctttc-----------------------------acttacggctgctgagtatgat------ +cagactacctatggctcttctactaaccctatgtatgtctccgacactgtgacgttcgt---gaatgtggct +accggtgcccagggggtctcgcgctccatggactggtctaaggtcacccttgatggacgcccgctaactact +at-----ccagcagtattctaagactttctatgttc-tgcctctccgtggtaagctctctttttgggaggcg +ggtactactaag--gcttgctacccttataattataatactactgctagtgatcagatcttgattgagaatg +cagctggccat------cgggtttgcat-ttcaacctatactactaatctggg--------------ctctg +ggcctgtctctatctc-cgctgtcggtgtcctcgcacctcattctgcactggctgttttagaggacactgct +gatt---------atcctgcccgcg----ctcacacttttgatgatttctgccctgagtgccgtgcgc---t +tggtcttcagggctgtgcttttcagtc--------aactgtagctgagttgcagcgtct------------- +--------taaaatgaaggtgggtaaaacccgggagtattgattta-tt----ct-gcct----------gt +gcct-tcc--------tt------ctgtc--tctt--t-ccttt--------------tatt-t-------t +ttctttct----gcg----------------tttcgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------aaaaaaaaaaaaaaa--------------- +-aaaaaaaaaaaaaaaaaaaaaaaaaaa-------------------------------------------- +----------- +>KJ496144.1/17223/1-7223 |Hepatitis E virus isolate 180C, complete genome +---------------------------ggtagacca-cgtacgttgctcgcgtacgt-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcatcacaactgccattgag---caagccgctctggc +agcggccaattccgctttggcgaatgctgtagtggtacggccgtttctttcccgcttgcagactgagattct +tattaatttgatgcagcctcgccagcttgtttttcgccccgaggttttctggaatcatcctatacagcgggt +tatccacaatgaactagaacaata---ttgccgtgccc-gtgctggtcgttgccttgaggttggggcccatc +ctcgctctataaatgacaaccctaatgttttacaccggtgttttcttcgccctgttgggcgcgatattcagc +gttggtatacagctcccacccgtggcccagctgccaactgccgcaggtcagcactccgcggtctctcgcccg +ttgatcgcacttattgtttcgacggcttttctcggtgctccttcgccgctgagaccggagttgctttgtact +ctttacatgacctgtggccggccgacgtcgccgaggcgatggcccggcacggcatgacccgtctgtatgcag +ttctccacctc-ccacccgaggttctcctgcctcctggcacttatcatactacctcatacctactgattcat +gacggccagcgcgctgtgatcacatatgagggtgacaccagcgccggttataaccatgatgttgccatactc +cgtgcttgggtccgcacgactaaggtcaccgggaaccaccccttggttattgagagggtccgagctatcggc +tgccattttgttctgctcctcactgcggcacccgaaccgtcgcccatgccgtatgtaccttatcctcgatct +acagaggtctatgtgcggtctatatttggtcccggc---------gggtcgccttctttgtttccatcagct +t----------gctcgactaaatcta-cttttcacgctgtcccagtccatatctgggatcggctcatgctct +ttggtgccacgcttgacgaccaggcattctgttgctcccgtctgatgacgtatcttagggggataagctata +aagtcacggtcggagccctggttgccaacgagggctggagtgcatcggaggatgcgctcactgctgtgatta +cagctgcctatctcactatttgccaccaacgttacctccgcacacaagccatttctaagggcatgcggaggt +tggaattggagcatgcacagaagtttattacaagactttacagctggcttttcgagaagtc---------gg +gccgcgattatatccccggccgtcaattggaattttatgcacagtgccggcgttggctttctgccggatttc +atctcgaccctcgtgtgcttgtctttgacgaggcggcatcctgc---cgctgcaggagttcccttcagaa-- +----ggctgttagccggttctgctgcttcatgcggtggctgggtcagga------gtgcaactgtttcctcc +----------------aacctgtagagggtcttattggcgatgaaggc--------catgataacgaggcct +atgagggctctgaggttgatccggctgagccggccgccccagatattgacggcatctacacggtctcggggg +cgcaattgtctgcgttgtaccgggcccttggccttcctactgatctggccgctcgtgcctcccggctcgttg +ccaccgttgaattgacatcccacccaggccgcatcgagtgtaagacgacacttggtaataaaatctttctta +ccagcttccttgacggttcccgtctggaggctaacggccc------------------------ggaggagt +ttatactatcttttgatgccgaccgtcagaccatgtcggctggccccaacagccttacatatgagataacgc +ctgctggtttgcgggttcacattgtttct-------aatggacatgattgtgttgccacctttcca---cct +ggtcccgcacctgcagctgcctccggcgaggttactgcattttgttcggcgctgtatcggtttaaccggtcc +atccaacggcattcacttgtaggaaccctctggtatcatccagagggcttacttggtctcttcccgcctttc +tcgccgaatcatatctgggattccgccaaccccttctgcggggagagcactctctacacccgcacttggtcc +gtctctggcttttccagtgattttgcaccagtcgggatgtctggtctggcgcccgagcagcctggcgtcaga +actgttt----gttcccccccgcccgcctctgaaca------------------------------------ +---gggtgatccacagcca----gctcaga------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ccccccggcctgttcttcagcctggg +ccgagtgttcctgcatccgtgggttcggtaagg-------------------gcgcccactgcccaggggcc +tgtcccatc--------------------------------------ggtttgccgtaaccgccgcc----- +-------------------tcctcttcacttatcctgatggagccaaagtgtactcgggctcgctgttcgag +tccgagtgcacttggctagttaatgcttctaaccccggccaccgccctggtggtggcctctgtcatgcattt +ttccaacgttttcctgagtctt------ttgatcatactaaatttatcatgcgtgaggg---tcttgctgcc +tacacccttgcgccccggcccattatacatgctgtggcccctgattaccgggttgaacataacccgaaaagg +cttgaagctgcctaccgtgagacttgctcccgtctcgggacagcagcctatccactgcttggctccggaatt +tatcaggtcccggtcggccccagctttgatgcttgggagcgtaatcatcgcccaggggatgagctttatctc +actgatgctgcagccatc-------------------------------------------------tggtt +tgagagtaataaaccttctca--------------------------------------------------- +------------------------------------------gccagctttgactatcactgaagatgttgc +ga------------ggactgccaacctcgccctcgagatag------------atgctgcgaccgaggtcgg +ccgggcttgc---tctggctgccgtgtcgaccccggtgtgattcactaccagttcactgcaggtgtccccgg +gtccggtaaatcgcggtcgattcagcagggtgacgttgacgttgttgttgtcccgacgcgggaacttcggga +tagctggcgtcgtcgtggttttgcggcctttaccccgcacacagcagcccgggtgacccgtggccgccgagt +tgtgatcgacgaggctccctctttaccaccccatcttctgctcctacatatgcagagggctgcctccgttca +ccttcttggcgacccgaatcagatccccgctatagactttgagaacacggggttggtcccggcaatccgccc +cgagcttgtccctacaagctggtggcatactacccatcgctgcccggcggatgtttgtgagttaattcgagg +ggcctaccccaagatccagactgccagccgtgtcctgcgttcgctcttttggggtgag------cccccggt +tggccagaaacttgtatttacacaggcagctaaggccgccaaccctggtgcaattacagttcatgaagcgca +gggagcgacgtttactgctactacaatcattgccacagctgatgcccgggggctaattcagtcttcacgtgc +acatgcaattgtcgcactcacccgtcacactgagaagtgtgtggtgcttgatgccccaggccttcttaagga +gatcgggatatctgattctattgtcaacaatttc------------------------------tttctttc +cggtg--gggaggtcggtcataatagaccatcagtcataccccgtggcacccctgatcttaatgttgccac- +-----gttagatgccttcccaccctcttgccagatcagcgcttatcaccagcttgctgaggaacttggccac +cgtcctcaacctgttgctgctgttctcccgccctgccccgaactcgaacaggggttgctttatatgcctcag +gagctcaccgcctccgatagcgtcctggtgtttgagcttactgatatagtccactgccggatggctgcgccg +agccagcgtaaagctgtgctctccactcttgttggtaggtacggccgccgcaccaggctctatgaggctgcc +cactctgatgttcgcgagtctctagctaagtttattcccaccatcggtcctgtgcgagccactacttgcgaa +ctctatgagcttgttgaagccatggtggagaagggtcaggatgggtcggccgtcctagagttggacctgtgt +gcccgtgatgtgtctcgcataacatttttccagaaggattgcaacaagttcaccactggcgagacgattact +catggtaaagtcggtcaaggtatatctgcgtggagtaaaacattttgtgccttattcgggccttggttccgc +gccattgaaaaacagatccttgccctcctccctcagaatgtgttttatgctgatgcctatgatgattctgtc +ttctctgcggccgtgtccggcgcaaaagctagcatg---gtttttgagaatgacttctctgagtttgacagc +acacagaataacttttcttt------------------gggtcttgagtgtgttattatggaagagtgcggt +atgcccgcttggttaatccgtctttaccatcttgttcgctctgcctggatcctccaggcacctaaagaatct +ctgaagggtttttggaagaagcattccggtgagcctggcacgttgctttggaatactgtttggaatatggct +attatagcgcattgttatgagttccgcaacctccaggctgccgcttttaaaggtgatgactctatggtactc +tgtagtgactatcgccagagccgcaacgccgccacccttattgccggttgtggtttaaaattgaaggtggat +taccggccgatcggtttgtatgccggtgtcgtggtggctcccggcctcggggcccttccagacgtcgtccgg +tttgccggaaggctgtctgagaaaaattggggccccgatccagatcgtgcagaacagcttcgccttgctgtc +tgtgactttctccggaagttaacgaatgttgctcagttgtgtgtggatgttgtttcacgtg-------ttta +tggtgtcagccctggtttggtgcataaccttattggtatgcttcagaccattgctgacggtaaggcccattt +taccgagacaattaagccagttcttgaccttacagacgccattatacaacggcgtgaatgaataacatgt-c +t----------------tctgcatcgcccatggg------------tacaccatgcgccctcgggctatttt +gttgttgttcctcatgcttttgcctatgttgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gtcgccgtgggcg-gcgcagcggcggttc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----cactcccctatattcat---- +--------------ccaaccaacccattcgccgctgacgtctccgcagcatcccgggctggggctggccttc +gccaatcgacccg---------------acccctcggtaccgcttggcgtgaccaatccca----------- +------gcgcccctccgttccccctcgtcgccgagctgcccct---------tccggggctgcgccgctgac +cgctgttgctcccgccccaggcactgctcccgtccctgatgttgattcgcgtggcgctgtcttacgccgcca +gtataatctgtcaacctcaccccttacatcttcggttgcttctggcacgaatcttgttctttatgctgctcc +gcttaacccgcttttaccccttcaggatggtaccaatactcatatcatggctacagaggcgtccaactatgc +tcaataccgcatagtccgtgcgaccattcgttaccgccctttggttccgaacgctgttgggggctatgctat +ttccatctctttttggcctcagactactaccacaccgacgtcggttgatatgaattcaatcacttcgactga +tgtccggattgttgttcaacctggtctcgcctccgaactagtgatccctagcgagcgcctccattatcgcaa +ccaaggttggcgctctgttgagacatctggggttgctgaggaggaagcgacatccggtctagttatgctttg +tgtccacggttcccctgttaattcgtatactaatacaccttacactggtgctttaggcttgcttgacttcgc +ccttgagcttgagtttcgcaatcttacgcccggcaatactaacacccgtgtctctcgttattctagtactgc +ccgtcaccgcttgaaacgtggtgccgatggtacggctgttctaacgaccacagcagccactaggttcatgaa +ggatctgcacttta---ccggcacgaat---ggtttgggtgaggtcggtcgtggcatagcgttaaccctgtt +caatcttgctgacactctccttggcggcctcccgacagaattgatttcgtcagctggaggccagctctttta +ctcccgcccagtcgtttcagccaatggcgagccgtctgtgaagctttatacttctgtcgagaatgctcagca +ggataagggtatcgctattccccacgacattgaccttggcgagtcacgtgttgttattcaggattatgataa +ccaacatgaacaggatcggcccactccgtctccggctccctcccgtccattctctgttctccgcgccaatga +tgttctttggctttc-----------------------------gctgaccgctgccgagtatgat------ +caagcgacttatgggtcttccaccgacccggtttatgtttctgatacagttacttttgt---caatgttgcc +actggcgcccaggccgtggcccgcactcttgactggaccaaggtcacgctggatggtcaacccctaaagacc +at-----caatcagtattctaagacattctttgtcc-tccctcttcgcggcaagctatctttttgggaggcc +ggtactgttaag--gccggctacccttataattacaatactacagctagtgatcatatactaattgagaacg +cagccggtcat------cgtgttgcgat-ctctacttacaccactagtcttgg--------------tgctg +gcccggttgccatctc-ctgtgtaggcgtgctagcaccccatgccgcgcttgctgtattggaggatactaca +gacc---------atccggctcgtg----cccatacatatgatgacttctgccctgagtgccgtacac---t +cggtctccagggttgtgcatttcagtc--------tactatcgctgaattgcaacgcct------------- +--------taagatgaaggtgggtaaaactcgggagtattaatcta-tt----ct-tttt----------gt +gccc-ccct-------tc-----tttgct-------tt-cct----------------tatt-t-------t +ctttttct----gcg----------------tttcgcgctccctg---------------------aaaa-- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>KJ013414.1/17296/1-7296 |Hepatitis E virus isolate CHNBJr14(8), complete genome +----------------------------gcagacca-cgtaag-------------t-----ggtcgatgc- +---catggaagcgcatcagtttattaaagcgccgggcattaccaccgcgattgaa---caggcggcgctggc +ggcggcgaacagcgcgctggcgaacgcggtggtgattcgtccgtttctgagccgtacccagaccgaaattct +gattaacctgatgcagccgcgtcagctggtgtttcgtccggaagtgttttggaaccatccgattcagcgtgt +gattcataacgaactggaacagta---ttgccgtgcgc-gtgcgggccgttgcctggaagtgggcgcgcatc +cgcgtagcattaacgataacccgaacgtgctgcatcgttgctttctgcgtccggtgggccgtgatgtgcagc +gttggtatagcgcgccgacccgtggcccggcggcgaactgccgtcgtagcgcgctgcgtggcctgccgccgg +cggatcgtacctattgctttgatggctttagcggctgcacctttgcggcggaaaccggcattgcgctgtata +gcctgcatgatctgtggccggcggatgtggcggaagcgatggcgcatcatggcctggcgcgtctgtatgcgg +tgctgcatctg-ccgccggaagcgctgctgccgccgggcacctatcataccaccacctatctgctgattcat +gatggcgcgcgtgcggtggtgacctatgaaggcgataccagcgcgggctataaccatgatgtgagcattctg +cgtgcgtggattcgtaccaccaaagtgaccggcgatcatccgctggtgattgaacgtgtgcgtgcgattggc +tgccattttgtgctgctgctgaccgcggcgccggaaccgagcccgatgccgtatgtgccgtttccgcgtagc +gcggaagtgtttgtgcgtagcatttttggcccgggc---------ggcagcccgagcctgtttccgagcgcg +t----------gcagcaccaaaagca-tttttcatgcggtgccggtgcatatttgggatcgtctgatgctgt +ttggcgcgaccctggatgatcaggcgttttgctgcagccgtctgatgacctatctgcgtggcattagctata +aagtgaccgtgggcgcgctggtggcgaacgaaggctggaacgcgagcgaagatgcgctgaccgcggtgatta +ccgcggcgtatctgaccatttgccatcagcgttatctgcgtacccaggcgattctgaaaggcatgcgtcgtc +tggaactggaacatgcgcagaaatttattacccgtctgtatagctggctgtttgaaaaaag---------cg +gccgtgattatattccgggccgtcagctggaattttatgcgcagtgccgtcgttggctgagcgcgggctttc +atctggatccgcgtgtgctggtgtttgatgaaagcgtgcattgc---cgttgccgtagctttgtgaaaaa-- +----cgtggcgcgtaaagtgtgctgctttatgaaatggctgggccagga------atgcacctgctttctgg +----------------aaccggcggaaggcctgattggcgatcagggc--------catgataacgaagcgt +atgaaggcagcgaagtggatccggcggaaccggcgccgagcgatgtgagcggcacctatgtggtgcatggcc +agctgctggtggatctgtatcgtgcgctgaacgtgccgcatgatattgcggcgcgtgcggcgcgtctgagcg +cgaccgtggaactgaccgcgggcccgggccgtctggaatgccgtaccattctgggcaacaaaacctttcgta +ccaccattaccgatggcgcgcagctggaagcgaacggccc------------------------ggaacagt +atgtgctgagctttgatgaagcgggccagtgcatgggcgcgggcccgcatagcctggtgtatgaactgacca +gcagcggcctgcaggtgaaaattagcagc-------aacggcctggattgcgtggcggtgtttccg---agc +ggccgtgcgccgagcgtgggcgcggcggaagtgaccgcgttttgcagcgcgctgtatcgttataaccgtacc +attcagcgtcatagcattgtgggcggcctgtggctgcatccggaaggcctgctgggcctgtttccgccgttt +agcccgggccatttttgggaaagcaacaacccgttttgcggcgaaggcaccctgtatacccgtacctggagc +atgagcggctttagcagcgattttagcccgccggaagcgaccgcgggcgcgccgccgccggc-------gag +cctgccgt------gcaccccggcgccgagcgaaat-------------tgcggtgcgtacc---------- +-----ct--gccgccgccg----ccggtggatagcc-----------gtgtgattgatccgccggcggcgac +cagcgt------------------------------------------------------------------ +--------------------------------------------------------------g--------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------------ccgtttgcgcataaaccgcc +ggaacgtag--------------------------------------cagcgcgcgtaaccgtcgtc----- +-------------------tgctgtatacctatccggatggcgcgaaagtgtatagcggcagcctgtttgaa +agcgattgcgattggctggtgaacgcgagcaacccgggccatcgtccgggcggcggcctgtgccatgcgttt +tatcagcgttttccgcagagct------ttgatcataccaaatttattatgcgtgatgg---cctggcggcg +tataccctgctgccgcgtccgattattcatgcggtggcgccggattatcgtgtggcgcataacccgaaacgt +ctggaagcggcgtatcgtgaaacctgcagccgtctgggcaccgcggcgtatccgctgctgggcagcggcatt +tatcaggtgccggtgggcccgagctttgatgcgtgggaacgtaaccatcgtccgggcgatgaactgtatctg +accgaaccggcgaccgcg-------------------------------------------------tggtt +tgaagcgaacaaaccggcgcgtccgccgattccgattgtgctggataccccgccgccggatcatccgccgac +cggcgcgggcagcccgccggaagcggataccggcccggcgctgccggcgctgaccattaccgaagatgcggc +gc------------gtaccgcgaacctggcgctggaaattg------------atagccgtaccgaactggg +ccgtgcgtgc---gcgggctgcgcggtgagcccgggcgtggtgcgttatcagtttaccgcgggcgtgccggg +cagcggcaaaagccgtagcattcagcagggcgatgtggatgtggtggtggtgccgacccgtgaactgcgtaa +cagctggcgtcgtcgtggctttgcggcgtttaccccgcatagcgcggcgcgtgtgaccagcggccgtcgtgt 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+catgcggatgtgcgtgaaagcctgagccgttttattccggcgattggcccggtgcaggcgaccacctgcgaa +ctgtatgaactggtgcaggcgatggtggaaaaaggccaggatggcagcgcggtgctggaactggatctgtgc +agccgtgatgtgagccgtattaccttttttcagaaagattgcaacaaatttaccaccggcgaaaccattgcg +catggcaaagtgggccagggcattagcgcgtggagcaaaaccttttgcgcgctgtttggcccgtggtttcgt +gcgattgaaaaacagattctgaccctgctgccgccgaacattttttatggcgatgcgtatgaagatagcgtg +tttagcgcggcggtgaccggcgcgggcagcagcatg---gtgtttgaaaacgattttagcgaatttgatagc +acccagaacaactttagcct------------------gggcctggaatgcgtgattatggaagaatgcggc +atgccgcagtggctggtgcgtctgtatcagctggtgcgtagcgcgtggattctgcaggcgccgaaagaaagc +ctgaaaggcttttggaaaaaacatagcggcgaaccgggcaccctgctgtggaacaccgtgtggaacatggcg +gtgattgcgcattgctatgaatttcgtgattttaaagtggcggcgtttaaaggcgatgatagcgtggtgctg +tgcagcgattatcgtcagagccgttttgcggcggcgctgattgcgggctgcggcctgaaactgaaagtggat +tatcgtccggtgggcctgtatgcgggcgtggtggtggcgccgggcctgggcaccctgccggatgtggtgcgt +tttgcgggccgtctgagcgaaaaaaactggggcccgggcccggaacgtgcggaacagctgcgtctggcggtg +tgcgattttctgcgtaaactgaccaacgtggcgcaggtgtgcgtggatgtggtgagccgtg-------tgta +tggcgtgagcccgggcctggtgcataacctgattggcatgctgcagaccattgcggatggcaaagcgcatta +taccgaaaccgtgaaaccggtgctggatctgaccaacagcattgtgcagcgtctggaatgaataacatgtt- +tc----t---------ctttgcatcgcccatggg------------ttcaccatgcgccctggggctatttt +gctgctgttcgtcgtgtttttgcctatgttgcccgcgc---------------------------------- +-caccgg------ccggtcagccggctagcc------------gccgtcgtgggcg-gcgcggcagcggtcc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctattttcat---- +--------------ccaaccaaccccttcgccgctgacgttcactcacattccgggtctggagcccgacccc +ggcaaccagcccg---------------cccccttggcacctcttggcgtgacctgtccca----------- +------gcgcccccccgctgcctcgcgccgtcgatctacccca---------gctggggctgcgccgttgac +cgctgtttcacctgcacctgatacggcgcctgtcccagatgttgattcacgcggggctatcctgcgccgtca +gtataatctctccacttcacctttaacttcgactgttgcctcaggcactaaccttgttctatatgctgcacc +gcttaaccccctcctgcctcttcaggatggcaccaacacacacatcatggcgactgaggcgtctaattatgc +tcagtaccgggttgttcgagcgacaatccgttatcgccctttggtgcccaatgcagtcggtggctatgcaat +ttctatctctttctggccccagaccactacaacccctacctccgttgatatgaattccatcacctcaactga +tgtcaggattcttgttcaacctggtctagcttccgaacttgttataccgagtgagcgtctccactatcgtaa +ccaagggtggcgttctgtcgagacctccggtgtggctgaggaggaggccacctccgggcttgttatgctctg +tatccatggctcccctgtaaattcatacaccaacaccccttacacaggtgctttggggcttcttgattttgc +gcttgagattgagttccggaatctgactccggggaacaccaatacacgtgtctcccggtataccagtaccgc +ccgccatcgtttgcgtcgtggcgccgatgggaccgccgaacttacaactacggcggcaacacggtttatgaa +agatcttcatttca---ccgggatgaat---ggggtcggtgagatcggtcgtggcatagccctgacgttgtt +taacttagctgatacacttctcggtggtctgccgacagaattaatttcgtcggccgggggtcaggtattcta +ctcccgccccgtcgtctcagccaatggcgagccgactgttaagttgtacacatcagttgagaacgcacagca +agacaaagggatcgcgatacctcatgacattgatcttggcgattcccgcgttgttattcaggactatgacaa +tcaacacgaacaggaccggcctacaccgtcaccagccccctctcgccctttctccgttctacgtgttaatga +tgtgctgtggctttc-----------------------------gctaactgctgcagagtatgac------ +caaactacatatggctcgtcaactaaccctatgtatgtttcagacactgtcacatttgt---caatgtcgca +acaggtgcccaggctgtcgcccgttctcttgattggtctaaggtcactctggacgggcgaccacttaccacc +at-----acagcagcactctaaaacgttttatgttc-tccccttgcgcggtaagctctccttttgggaggcc +ggtactaccaag--gcaggttacccctataattacaacactaccgccagcgatcagatcttgattgagaatg +cagctgatcac------cgtgttgctgt-ttccacctacactacgagtttggg--------------cgctg +gccctgtgtccatctc-tgcagttggtgtgcttgccccgcattcagttctagctgtccttgaggatactatt +gatt---------accccgctcgtg----ctcacacttttgatgacttttgccccgaatgccgtattc---t +tggcctgcagggctgtgcttttcagtc--------tactgttgctgagcttcaacgcct------------- +--------taagatgaaggtgggtaaaacccgggagtcttaattaa-tt----ct-tgct----------gt +gcct-tcct-------tc-----ttcgctgactgc-tt--------------------tatt-t-------c +ttatttct----gcg----------------ctccgcgctccctg---------------------gaaaaa +aaaaaaa----------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>KF922359.1/17132/1-7132 |Hepatitis E virus isolate rt93100008 ORF1 gene, partial cds; and ORF3 and ORF2 genes, complete cds +------------------------------------------------------------------------ +--------------------------aggctcctggcattactactgccattgag---caggctgctctggc +tgcggctaattccgccttggcgaatgctgtggtggttcggccgttcttgtcccgtgttcagaccgatattct +tatcaatttgatgcaaccccggcagcttgtatttcgccctgaagttctgtggaaccatccgattcagcgagt +tatacataatgagctagagcagta---ttgccgtgctc-gtgctggccgctgcctggaggtcggggctcatc +caagatctattaatgacaaccctaatgttttgcaccggtgcttcctccgtccggtcgggagggatgtccagc +gctggtacactgcaccgactcgcggcccggcggctaactgccgccgctccgcgttacgtggcctaccccctg +tcgatcgtacctactgtttcgacgggttttcccgctgcgcctttgccgccgagactggaattgccttatatt +cactacatgacctctggcctgcggatgttgcagaggccatggcccgccatgggatgacacgcttgtacgctg +tcctccaccta-ccccctgaggtcctgttaccacctggtacttaccacactacctcttacttgttgatccat +gatggcgatcgtgctgtcgtgacttatgagggggatactagtgcaggctataaccatgatgtgtccattctc +cgtgcgtggattcgtacaactaagatagttggtgaacacccgctggtcatagagagggtccgtgccattggc +tgccattttgtgctgcttctcactgccgctcctgaaccatctcctatgccttatgtcccataccctcgttca +acagaggtgtatgttaggtctatattcggccctgga---------gggtcgccttcccttttcccatcagcc +t----------gttctactaaatcta-catttcatgctgtcccagttcacatctgggaccggctcatgcttt +ttggcgctactctggatgaccaagccttttgttgctcgcggcttatgacctatctccgcgggatcagttata +aagtgaccgttggtgcactcgtcgccaacgaaggctggaatgcctctgaggatgcgctcactgctgtgatca +ctgcagcgtacttgactatctgtcatcagcgctacctccgaactcaggctatatctaaaggtatgcgtcggt +tagaagtagagcacgcccagaagtttatcaccaggctttatagttggttgtttgagaagtc---------cg +gccgtgactacatccccggccgccaacttcagttttatgcgcagtgccgccgctggctctctgccggcttcc +atctagatcctagagtccttgtttttgatgaggcggttccttgc---cgctgtaggagcttcttgaagaa-- +----ggttgctggcaagttttgctgctttatgaagtggctggggcagga------gtgtacctgcttcctgg +----------------agccggctgaaggcttgattggtgactgcggc--------cacgataacgaggcct +atgaaggttccgaggtggattctgctgagcccgcccaccttgatgtcaccgggacttatgcagttcatggcc +gtcaacttgaggctctatacagggcgctcaatattccgcacgatattgcggcccgtgcgtcacgcctgacgg +ctaccgtggagcttgctgctggcccaggtcgccttgaatgccgcacggtgcttggaaacaagacttttcgta +cattaataactgatggtgcccacctagaggttaatggccc------------------------tgagcagt +atgtcttaacatttgatgactcccgccaggcgatgggtgctgggcctcacagtctcacatatgagctcaccc +ctgctggcttgcaggttaagatatcttct-------aatggcttagattgtactgctgtcttcccc---cct +ggcggggcgccaagtgctgcacctggtgaggttgcagccttctgcrgtgctttatacaggtataacagattt +actcagcgccattcgttaacgggcgggttgtggttacaccctgaggggcttttgggtttgtttccccccttt +tcccccgggcatgtttgggagtctgcaaatcccttttgcggtgaaggtacactttatactcggacctggtct +acatctggtttttctagtgatttttcacctcctgaggcggctcatgtcgccccagcccccgatgg----ggg +gctgcccctagggcctccctcctctgttagtgacgt-----------------ctgggtgct---------- +---------cccgccgccc----tctgagggat--------------cagtggccgcttcgttgcctgcaac +tctagt------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------------------------tagtgagcttaccagcccacccagt +cctgctgcacctaag-------------------------------------ccccccgttcgtaagccgcc +cccaccgtc--------------------------------------accggtccgcactcgccggc----- +-------------------ttctctacacctacccggatggggctaaggtctatgcaggctccctgtttgaa +tcagactgcgactggctggttaacgcatctaaccctggccaccgccctggtggcggtctttgtcatgctttt +taccagcgctttccagagtcgt------ttcaccctaccgactttattatgcgcgaggg---cctcgctgcg +tatactttgaccccacgtccgatcatccatgctgtggcccctgattatagggttgagcagaaccctaagagg +ttagaggcggcgtatcgcgagacatgctcccgtcttggtactgccgcttacccactacttggatcggggatt +tatcaagtccctgtgggtctgagttttgacgcatgggagcgtaaccatcgcccgggtgatgagctctacctc +accgagcccgctgccacg-------------------------------------------------tggtt +tgaggctaataagccggctca--------------------------------------------------- +------------------------------------------gcctgctctgacgatcactgaagatacagc +tc------------gcacaactaacctcgcgcttgagatcg------------actctgctaccgaggtggg +tcgtgcctgt---accggctgtactgttagccccgggattatccattaccagtttactgctggggtgcctgg +ttctgggaagtctaggtctatacaacaaggggacgtcgatgttgtggttgtgccaacccgcgagctccgcaa +cagctggcgccgccgtggtttcgccgcttttacacctcacacggcggctcgtgtcaccgccggccggcgtgt +tgtgattgatgaggcaccttcgcttccgccacacctgctactgcttcatatgcagcgggcttcgtcagtcca +tctcctcggcgaccccaaccagatccccgctattgattttgagcatgcaggcttggtgccggcgatccgccc +tgagcttgccccaaccagctggtggcacgttacacatcgttgtcccgctgacgtgtgtgagctcatacgcgg +ggcctatcccaagattcaaaccactagccgcgtgatgcgatccctattctggaatgag------cctgcggt +gggtcagaagttggtcttcacgcaggcggctaaggcagctaatcccggtgcaattactgtccatgaggccca +gggcgctacttttacagaaactactattatagccacggccgatgctaggggtcttatccagtcctctcgtgc +gcatgcaatcgtcgcactgactcgccatacagaaaaatgtgttattttggatgcccccggcctactgcgtga +ggttggtatttccgatacaattgtcaacaatttc------------------------------tttctgtc +tggtg--gcgaagtcggccaccaccgcccctctaccataccccgaggcaacccagatcggaatttagacac- +-----cctgcaggcatttcctccatcttgccaaattagtgcctatcaccagttagctgaggagctaggccac +cgaccggccccagtggctgctgtattgccaccttgtcctgaacttgagcagggtttgctctatatgccacaa +gagcttacagtgtccgatagtgtcttggtttttgagctcacggacatagttcattgccgaatggcggctcct +agccagcggaaggctgtcctttcaacgctcgtcggcaggtacggtcgccgaacgaaactgtatgaggcggct +cactctgatgtccgtgagtctttagggaggtttatccccactatcggaccagttcaggccaccacatgtgag +ctgtacgagttggtagaggctatggttgtgaagggccaggacggttccgctgtgttagagcttgacctttgt +agccgtgatgtctcacgtattacattctttcagaaggactgtaataaatttacaacaggtgagactattgct +cacggcaaggtgggccagggtatctcggcctggagcaaaaccttttgtgctctgttcggaccgtggttccgc +gccattgagaaggagatcctggcccttctcccgcctaatatattctacggtgatgcttttgaagagtcagtg +ttttctgcagccatttctggcgcaggctctagtatg---gtctttgagaacgacttttccgagtttgacagt +acccaaaacaacttctccct------------------cggcctcgagtgtgtcatcatggaagagtgtggc +atgccccaatggcttattcggctgtaccatctagttaggtcagcttggactttgcaggccccgaaagagtcc +ctgaaaggattttggaagaagcactctggcgagccaggcacactcctctggaacactgtctggaatatggcg +atcatagcgcattgttacgaatttcgtgacttgagggtagcagcgttcaaaggggatgactcggtggtcctc +tgcagtgactaccgccagagccgtaatgcagccgccttgattgctggttgtgggttaaaattgaaggttgat +tatcgccccatcgggttgtacgccggtgttgtggtggccccgggcctcggggcactccctgacgtcgttcgg +ttcgccggtcggctgtctgagaagaactggggcccgggccccgagcgcgccgaacagttgcgcttagccgtc +tgtgattttcttcgaaggttgacgaatgttgcacaggtctgtgttgatgttgtgtcccgtg-------ttta +tggggttagtcctgggttggtacataaccttatcggcatgttacagactatagccgatgggaaggcccattt +caccgagactgtcaaacctgtattggatcttacaaattctatcatacagaggttggaatgaataacatgtt- +g----------------tgtgcaccgctcatggg------------accaccatgtgccctcggactgttct +gttgctgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaacccggggctggagctcgccctc +gacagccgtcccg---------------ccccctcggctccgcttggcgtgaccagtccca----------- +------gcgcccccccgctgcccctcgccgtcgatctacccca---------gctggggctgcgccgttgac +tgctgtctcccctgcgcctgatacagccccagtccctgacgttgattctcgcggcgctatcttgcgccgcca +gtataatttgtctacttctcctctgacttcctctgttgcttctggtactaaccttgttttgtatgctgcccc +gctcaatcctctcctacctctccaggatggtaccaatactcatattatggcaactgaggcgtctaattatgc +ccagtatcgggttgttcgggctacaatccgttaccgccctctggttccgaatgctgttggcggctatgcaat +ctccatctccttttggccccagaccacaactacccccacctctgttgatatgaattccattacttccactga +tgtcaggattttagtccagcccggcattgcctctgagttggtcatcccgagtgagcgcctccattatcgcaa +ccagggttggcgctctgttgagacttcgggtgtggccgaggaggaggcgacttcgggtttggttatgctttg +catacatggctcccctgttaactcttataccaacacgccctatactggggcgttggggcttcttgactttgc +acttgagcttgaatttaggaatttgactcctgggaacactaacacccgtgtgtcccggtataccagtacggc +gcgccaccgcttacgtcgtggcgctgacgggactgctgagctcacgactactgcggctacgcgctttatgaa +ggacctgcatttca---ccgggatgaat---ggtgttggtgaggtgggccgtggcatagccctaactctatt +caaccttgctgatacacttctcggcggtttgccgacagaattgatttcgtcggccggaggtcaactcttcta +ctcccgtccagtcgtctcggccaatggcgagccgactgttaaattatatacatccgtcgagaatgcacagca +ggataagggcattgccataccacatgacatagatctaggagactctcgtgtggttattcaggattatgataa +tcagcatgaacaggataggcctaccccttcgccggccccgtctcgccccttttcggtcctccgtgctaatga +tgttttgtggctttc-----------------------------tcttacttctgctgagtacgac------ +cagaccacttatggttcgtcgaccaaccctatgtatgtttcagatactgtcacctttgt---taatgtggct +acgggagcccaggccgtagctcgctctcttgactggtctaaggttactttggacggtcgacccctcactact +at-----tcaacagtactctaagacattctatgtgc-tcccacttcgtgggaaactttctttctgggaggct +ggcaccaccaag--gccggatacccctataattataacaccactgccagtgatcagatcttgatagagaatg +cagccggtcat------cgcgttgctat-atccacctataccactagtcttgg--------------tgctg +gtccggtatccgtctc-tgcggttggagtcctcgccccgcattctgctctagctgtgcttgaagatactatc +gact---------accctgcccgtg----ctcatacttttgatgatttttgccctgagtgccgtaatc---t +tggcttacaaggctgtgctttccaatc--------tactatcgctgaacttcagcgcct------------- +--------caaaatgaaggtaggtaagacccgggagttttaattaa-ttt---ta-cttt----------gt +gccc-cct---------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>KF303502.2/17141/1-7141 |Hepatitis E virus isolate GiSw, partial genome +------------------------------------------------------------------------ +----atggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactccgctttggcgaatgctgtggtggttcggccgtttttatctcgtgtgcaaaccgagattct +tattaatttgatgcaaccccggcagctggttttccgccctgaggtactttggaaccatcccatccagcgggt +tatacacaatgaattagaacagta---ctgccgggccc-gggcgggtcgctgtttggaggtcggagctcacc +caagatccattaatgataaccccaatgtcttgcaccgctgtttccttaggccggttggccgagatgttcagc +gctggtactccgctcccacccgcggtcctgcggccaattgccgccgttccgcgttgcgtggtctcccccctg +ctgaccgcacttattgctttgatggattctcccgctgtgcttttgctgcagagactggagtggccctttact +ctttgcatgacctttggccggccgatgttgcggaggctatggcccgccatgggatgacacgcctatatgccg +cactgcacctc-cctcctgaggtgctgctaccacctggcacttatcacacaacctcgtatctcctgatccac +gacggcgaccgtgctgttgtaacttatgagggtgataccagtgcgggctataatcatgatgtctccatactc +cgtgcatggattcgtactactaaaatagttggtgaccacccgttggttatagagcgtgtgcgggccattgga +tgtcattttgtgttgctgctcaccgcagcccctgagccgtcacccatgctttatgtcccctacccccgctca +acggaggtgtatgttcgatctatatttggtcctggc---------ggctctccatctttgtttccgtcagcc +t----------gctccactaaatcta-cttttcacgctgtcccggtccatatctgggatcggctcatgctct +ttggtgccactctggatgatcaggcgttctgttgctcacggctcatgacttacctccgtggtattagctaca +aggtcactgttggtgcacttgtcgctaacgagggctggaacgcttctgaagacgccctcacagcagtgatca +ctgcggcttatctgactatctgccgccagcgttatcttcgcacccaggcgatatccaagggcatgcgccggc +tggaggttgagcacgcccagaaatttatcacaagactctacagttggctatttgagaaatc---------tg +gccgtgattacatccccggccgccagcttcagttttatgcacagtgccgacggtggttatctgcaggtttcc +atctagaccccagagtgctcgtctttgatgagtcagtaccctgc---cgctgtcggacgtttttgaagaa-- +----agttgcgggtaaattctgctgttttatgcggtggttagggcagga------atgtacctgcttcctgg +----------------agccagccgagggtttagttggcgatcaaggc--------catgacaacgaggcct +atgagggctctgaggtcgacccggctgaacctgcacatcttgatgtctccgggacctacgccgtccacgggc +accagcttgaggccctgtatagggcgcttaatattccacatgatattgccgcccgagcgtcccgactaacgg +ctactgttgaactcgttgcaggtccagaccgcttagagtgtcgcactgtgcttggaaataagactttccgga +cgacggtggtagatggcgcccatcttgaaatgaatggccc------------------------tgagcagt +atgttttatcgtttgatgcctcccgccagtctatgggggccgggccgcacagcctcacttatgagctcaccc +ctgccggtttgcaggtcaggatttcatct-------aatggcctggactgtactgctacatttccc---cct +ggcggagcccctggcgccgcgccgggcgaggtggcagccttctgtagtgccctttatagatataacaggttc +acccagcggcactcgttaactggcgggttatggctacatcctgagggattgctgggcattttcccccccttc +tcccctgggcatatctgggagtctgctaaccctttttgcggggaggggaccttgtatacccgaacgtggtca +acatctggtttttcaagtgatttctctccccctgaggcggccgcccctgcttcggctgctgcccc----agg +gttgcccc---atcccaccccacccgttagtgatat-----------------ttgggtgtt---------- +---------accgccgccc----tcagaggggt--------------ctcagcttgatgtggcacctgtgcc +ctcta------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tccccgagcctgccggaccgctcagc +cccgttacgctca-------------------------ccccccccccacccccccccgtgcgtaagccgtc +aacaccccc--------------------------------------gccctcccgtactcgtcgtc----- +-------------------tcctctacacctatcccgacggcgctaaggtgtatgcagggtcattgtttgag +tcagactgtgactggctggtcaatgcttcaaacccgggtcatcgtcccgggggtggtctctgtcatgctttt +taccaacgttttccagaagcgt------tctacccgactgagttcattatgcgtgaagg---ccttgcagca +tataccttgaccccgcgccctatcattcatgcagtggctcccgattatagggttgagcagaacccgaagagg +ctagaggcagcgtaccgggaaacttgctcccgccgtggcaccgctgcctacccgcttttaggctcgggtata +taccaagtccctgttagcctcagctttgacgcctgggaacgcaaccatcgccccggcgatgagctttacctg +actgagcccgccgcagcc-------------------------------------------------tggtt +tgaggctaataagccgccgca--------------------------------------------------- +------------------------------------------gccagcgctcactataactgaggacacggc +tc------------gcacggccaacctcgcattagagatcg------------atgccgccacagaggtcgg +ccgtgcttgt---gctggctgtactattagccccggggtcgtgcactatcaattcaccgccggggtcccggg +ctcgggcaagtcaaggtccatacaacagggagatgtcgatgtggtggttgtacccacccgggagctccgtaa +cagttggcgccgccggggttttgccgctttcacacctcacacagcagcccgtgttaccattggccgccgcgt +cgtgattgatgaggccccatctctcccaccgcacctgttgttgttacacatgcagcgggcctcctcagtcca +tctccttggcgatccaaaccagatccctgctattgattttgaacacgccggcctggtccctgcaatccgccc +cgagcttgcaccaacgagctggtggcatgtcacacaccgttgcccggctgatgtgtgtgagctcatacgtgg +ggcctaccctaaaatccagactacaagccgtgtgctacggtccctgttttggaacgaa------ccggctat +cggtcagaagttggtttttacgcaggctgctaaggctgctaaccctggtgcgattacggttcatgaagccca +aggtgccaccttcacagagaccacaattatagccacagccgacgccaggggccttatccagtcatctcgggc +ccatgctatagttgcactcactcgccatactgagaggtgcgttattttggatgcccccggcctgctgcgtga +ggttggcatctcggatgtgattgtcaataatttc------------------------------tttcttgc +tggcg--gagaggttggtcatcaccgcccttctgtaataccccgcggtaatcctgaccggaaccttgagac- +-----tttacaggccttcccgccgtcctgccagattagtgcttaccatcagctggcagaggaacttggccat +cgtccagcccctgttgccgccgtcttgcccccttgccctgagctcgagcagggcttgctttatatgccacag +gagcttactgtgtccgatagtgtgttggtttttgaacttacggacatagttcattgccgtatggctgcccca +agccagcggaaggccgttctttcaacactcgtggggaggtatggccgtaggacgaagttatatgaggcagcg +cactcagatgtccgtgagtccttagccaggttcatccctactattggacctgtccaggccaccacatgtgag +ttgtatgagctggttgaggccatggtggagaagggtcaggacggttctgccgtcctagagcttgacctttgt +aatcgcgatgtatcgcgcattacattcttccaaaaggactgtaacaaatttacaactggtgagactatcgcc +cacggcaaggttggccagggtatatcggcctggagtaagaccttctgcgctctgtttggcccgtggttccgt +gccattgaaaaagaaatactggccctgctcccgcccaatatattctatggcgacgcttatgaggagtcagtg +tttgctgccgctgtgtctggggcggggtcatgtatg---gtatttgagaatgacttctcagagtttgacagt +acccaaaataatttctctct------------------cggccttgagtgtgtggtaatggaggaatgtggc +atgccccgatggttaatcaggttgtatcatctggttcggtcagcctggattttgcaggcaccgaaggagtct +cttaagggtttctggaagaagcactctggtgagcctggtacccttctctggaacactgtctggaacatggcg +attatagcacattgctatgaattccgtgaccttcgtgttgccgccttcaagggtgatgactcggtagtcctc +tgtagtgactaccgacaaagtcgcaacgcagctgccttaattgcaggttgtgggctcaaattgaaggttgat +taccgttctatcgggttgtatgctggggtggtggtggcccccggtttggggatactgcccgatgtagtgcgt +tttgccggtcggttgtctgagaagaactggggccccggcccggaacgagctgagcagctgcgtcttgctgtt +tgtgatttccttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggagtcagccccgggctggtacataaccttattggcatgctgcagaccattgccgatggtaaagcccactt +tacagagactattaaacctgttcttgaccttacaaattctattatacagcgggtggaatgaataacatgtc- +t----------------tttgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gttgttgttcttcgtgtttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagtcgcctggcc------------gccgtcgcgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgatctcgtttcacaacccggggctggagctcgccctc +gacagccgccccg---------------ccccctcggctccgcttggcgtgaccagtccca----------- +------gcgcccctccgctgcctcccgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgctatatcaccagcccctgatacagcccctgtacctgatgtagattcacgtggagctatcttgcgccggca +gtacgatttgtctacgtcccccctcacgtcgtctgtcgcgtcgggtactaatctggttctctatgccgcccc +gctgaatcctctcctgccccttcaggatggcactaacactcatataatggctaccgaggcatccaactacgc +ccagtatcgggttgttcgagctacgatccgttaccgcccgctggtgccgaatgctgttggtggttatgctat +ctctatttctttctggcctcagactacaactactcccacttctgtcgatatgaattctattacttctactga +tgttaggattttggttcagcccggtattgcctccgagttagtcattcccagtgagcgccttcactatcgtaa +tcagggctggcgctctgttgagaccacgggtgtggctgaagaggaggctacttctggtctggtaatgctctg +cattcacggctctcctgttaattcttatactaatacaccttatactggtgcactggggcttcttgattttgc +attagagcttgaatttaggaatttgacacccgggaacactaacacccgcgtttcccggtataccagcacagc +tcgtcaccgactgcgccgtggtgcagacgggaccgctgagctcaccaccacagcagccacacgttttatgaa +ggacttgcatttta---ctggcatgaac---ggtgttggagaggtgggccgcggtattgctctgacattgtt +caatcttgctgatacgctcctcggtggtttgccgacagaattgatttcgtcggccgggggtcaactgtttta +ctcccgccctgttgtctcggccaatggcgagccaacagtaaagttgtatacatctgttgagaatgcgcagca +ggataagggcattgccatcccgcacgatatagatttaggtgactcccgcgtggttattcaggactatgataa +ccagcacgagcaagacagacctactccgtcacctgccccctctcgccctttttcagtccttcgtgccaatga +tgtcctgtggctttc-----------------------------tctcactgccgctgagtatgac------ +cagactacatatgggtcatccaccaaccctatgtatgtttctgacacagtcacgtttgt---taatgttgct +accggtgcccaggctgttgcccgctcccttgactggtctaaagttactctggatggtcgtccccttactacc +at-----tcagcagtattctaagacattttacgttc-tcccgctccgcgggaagctgtccttttgggaggct +ggtacgactaag--gccggttacccgtataactacaacactactgctagtgatcaaattttgattgagaacg +cggccggccac------cgtgtcgctat-ttccacctacaccactagtttggg--------------tgccg +gccctacctcgatctc-tgcggtcggtgtattagctccacattcagctcttgctattcttgaggatactgct +gact---------accccgctcacg----ctcatacttttgacgatttctgcccagagtgccgtgccc---t +tggtttgcagggctgtgcattccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaa------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>KC492825.1/17249/1-7249 |Hepatitis E virus strain CHYTHEV02, complete genome +----------------------------gcagacca-cgtatg-------------t-----ggtcgacgc- +---catggaggcccatcagttcataaaggctcctggcgtcactactgctattgag---caggcagctctagc +agcggccaactctgccttggcgaatgctgtggtggttcggccctttttatcccgccaacagacagagatact +aatcaacttgatgcagccccggcagcttgttttccggcctgaggtactgtggaaccaccctatccaacgtgt +gatccacaatgagctcgagcaata---ctgtcgagctc-gtgctggccgctgcctcgaagtgggcgcccacc +cacgttcaattaatgacaatcctaatgttttgcatcgttgttttcttaaaccagttggccgtgatgttcagc +ggtggtacactgcccccacccgcggccctgcggcaaattgtcgccggtctgctcttcgtgggcttccacctg +ttgaccgtacatactgctttgacggcttttctggctgcacctttgctgccgagacaggtattgccctctatt +cactgcatgacctatggcccgctgatgtcgctgaggcgatggcccgccatggaatgactcggctttatgcag +ccctccatctc-ccccctgaggtattattaccccctggtacataccacactacttcataccttttaatccat +gatggggaccgtgcagtgatcacatacgagggggactccagtgcgggatataaccatgatgtgtccattctg +cgggcatggatccgtaccaccaaggtcaccggtgatcacccgctggtaattgagcgagtccgagcggtgggg +tgtcattttgtgcttctcctcacagccgcccccgaaccgtcgccgatgccctatgttccatacccacgttca +accgaggtctatgttcggtccattttcggccctggc---------ggctcgccatccctctttccatctgcc +t----------gctctactaaatcaa-catttcatgccgtccctgtgcacatatgggataggcttatgcttt +ttggtgcaactcttgacgaccaagccttttgctgctccaggctcatgacgtacctccgtggcattagctata +aggttacggtaggtgctctcgttgccaacgagggctggaatgcttctgaggatgcgctgactgccgtaatta +ctgcggcttaccttactatctgccatcagaggtacctccgtacgcaggccatttcgaaggggatgaaaaggc +tggagcttgagcacgcgcagaagttcataacacgcctttacagctggttatttgaaaagtc---------cg +ggcgtgactatatccccggccgccaactgcagttttatgctcagtgccgccggtggctatctgcaggtttcc +accttgatcctcgtgtgctcgtttttgatgaacccgccccctgc---cgttgccggagtttcctgcgcaa-- +----agccgcccacaagttttgctgctttatgcggtggctgggtcaaga------ttgcacctgttttcttc +----------------agcctattgaggggagggttggcgaacaaggt--------tatgataatgaggcat +ttgaggggtcggatgttgaccctgctgaggaggccaccgtgagcattgccgggtcttacattgttactggcc +gtcagctgcagcctctataccaggcgcttggcataccatctgatcttgctgcacgtgccggtcggcttgccg +ctaccgttgaagtttcagatgcagagggccgtcttacctgtaagaccattttgggcaacaaaaccttttcaa +cggtattcactgatggcgctcagctggaggccaacgggcc------------------------ggagcagt +acgttttatcatttgacctgactaaacaaaccatggctgctggcccgcatagtcttagttacaccctaacac +cagaaggccttgaggtgcatatcatttct-------gctgggctcgactgcagggctgttttccca---cct +ggtgtcgcaaccccctctgcttccggggaggtgactgctttttgttcagctctttataggtttaaccgctgt +gttcagcggcattcccttattggaggtctgtggtactatcctgagagtttagttggcttgttcccaccgttc +tcacccggtcatagctgggagtctactaatcctttttgcggtgagagcactctttatactcgcacatggtcc +gtgtcgggtttttctagctgtttctctcccttcgaacctcgcgccccggagctgccacctcccgat---gtc +actggtat----------atctgtagatgctgatac-cccgcca---------ttggttccc-----cttgc +acagactcagcccccaacc----cccagtcatg---tgg--------------------cgcccccaccaga +tttgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttgatggtggtgccggccttggtttg +actagcgcccctgtg---------------gtg-------------------cccccggcgcccgtgcagcc +cgtaaccca--------------------------------------gc---ccgggccccgtcgacg---- +-----------------actgcttcacacttatcccgacggctcgaaggtgtatgccggatctctctttgag +tccgagtgcacatggctggttaatgcctccaatccgggccatcgtcccggtggtggcctctgtcatgcattt +taccagcggttcccagaatcct------tcgaccccgctgagttcatcatgtccgacgg---gcttgcagcc +tataccctgacgccccgtcctataatccatgctgtcgctcctgactatcgggttgaacataaccctaagcga +cttgaggccgcttaccgggagacgtgttctcgccgcggaacagcagcttaccccctcctcggcgctggtata +tacaaggtccctgtcgggctgagctttgacgcctgggaacgtaaccatcgacctggggacgagttgtatttg +accgagccggctatagcc-------------------------------------------------tggtt +tgaagccaaccggcctaccct--------------------------------------------------- +------------------------------------------ccccgctctgactatcactgaggacacggc +gc------------gcacggcgaacctggcattagagctgg------------atgcggccaccgaggtcgg +ccgggcgtgc---gctggctgccgtgttgaacctggtgtagttcattatcaatttacagctggtgtccctgg +ctctggtaagtcccggtcaatccaacagggagatgccgacgtaatagtggtaccaacccgtgagttacgtaa +ctcgtggcgccgccgcgggtttgcagcctatacgccccataccgcagctcgtgttacccgtggccgtagagt +tgttattgatgaggccccttcacttccaccacatttacttctgctgcacatgcagcgggcctcgtcagtcca +tcttcttggtgatcctaatcaaatccccgccattgacttcgagcatgccggcctcgttccagcaattcggcc +cgagttggttccaactaagtggtggcatcttacccataggtgccctgcggatgtctgtgagctgatccgtgg +tgcatacccaaagatccaaactgcaagccgtgtcctctgctctttgttttggggggag------ccccctgt +gggccagaagctggtattcacccaggcagccaaggctgctaaccccggtgcgattacagttcatgaagccca +gggcgcgacatttactgagaccacgatcattgccacggcggatgctcgtgggctgattcagtcctctagggc +acacgccattgtggccctgactcgtcacacggagaagtgtgtggtagttgacgccccagggctcctccgtga +ggtgggtatctccgatgctattgtcaataatttc------------------------------ttcctcgc +tagcg--gcgagattggtcagcaccgcccgtcagttgtacctcgtggtactataagcagcaacgttgatac- +-----gcttgatgcattccccccttcctgccagtttagcgcgtaccatcagctggccgaagagcttggccac +cggcccgtgccgattgctgctgttttgcccccctgccctgagcttgagcagggtctgctctatatgcctcag +gagctaactacatcggacagtgttctcacctttgaattgacggacattgtgcattgccgtatggcagcaccc +agtcagcgtaaggcagtcctgtcgactcttgtcggcaggtacggccgtcgtacgaaactgtacgaggctgcc +catgcagatgttcgcgggtccttgaaccattttattcctgagctcagccctattaatgtcaccacctgcgag +ctctacgagcttgtagaggctatggtagaaaagggtcaagacggttctgcagtcctggagcttgacctatgt +agccgtgatgtgtcccggataacctttttccagaaagactgtaataaatttacaacaggtgagacaatagcg +catggtaaagtcgggcagggcatatctgcgtggagcaaaaccttctgcgctttatttggtccgtggttccgc +gctattgaaaaggagattctggcagcgcttgcacccaatatcttttatggcgatgcttttgaagacacagtt +ttggccgctgctgttgcaggcgcctctggctgtaag---gtctttgagaatgacttctctgaattcgatagt +acccaaaataacttttcact------------------tgggcttgagtgtataattatggaggagtgtggc +atgccgcaatggatggtgcgactttaccatcttgttcgctccgcctgggtcctgcaggccccaaaagagtcc +ctgcgcggcttttggaagaagcactctggtgaacctggcaccctactgtggaataccgtctggaacatggcg +gttatagcacactgttatgagttccgtgaccttaaagctgcggcattcaaaggggatgactctgttgtgctc +tgcagcgactatcggcagagtcgtgatgcggctgccttaatcgctgggtgtggattgaagcttaaggtagat +tttaggcctattgggctgtatgctggtgtcgttgtggccccgggtctcgggacccttcccgatgttgtcagg +tttgctgggcggctctcagagaagaactgggggccaggcccggagaggatggagcagcttcggctagccgtt +tgtgactttttgcgaaagctaacgaatgtggctcaggtttgtgtggatgttgtttcgcagg-------tcta +tggtgttagccccggtttggtacataacctgataggaatgcttcaaactatcgcggatggtaaagcgcactt +cactgagacgatcaagcctgttcttgaccttactaattctatagtatatcgggtggaatgaataacatgttc +t----------------tttgctctctgcatggcg---------atgccaccatgcgctctcgggctcttct +gtttttgctcctcctgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gtcgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgcatccgacatttcagctgcccccggggctggagctcgccctc +ggcaaccagcccg---------------cccactcggctccgcttggcgtgaccaatccca----------- +------gcgccccgccgctcccgcccgtcgtcgacctacccca---------gctggggcttcgccgttgac +ggctgtggctccggcccctgacactgctccggtccccgatgttgactcgcgtggcgctatattgcgccgtca +gtataatctgtctacatctccacttacatctaccattgccactgggactaatcttgtgctatatgctgcccc +gcttagccctctactcccactccaggatggcaccaacactcacattatggctactgaggcttcaaactatgc +ccagtatcgtgttgttcgtgccaccattcggtatcgtcctctggtgccgaatgctgttggtgggtatgctat +atctatttccttttggccccaaacaactaccaccccgacgtccgtggatatgaattccatcacttccactga +tgtccgtattcttgtccaacccggtatagcctccgagttggtgatccccagtgagcgcctgcattatcgtaa +tcagggttggcgctcagttgagacctctggcgttgctgaggaggaggctacctccggtcttgttatgctttg +tatacatggatcacctgtgaattcttacactaatacaccttacactggtgctctcggcctgctcgattttgc +gcttgagcttgagtttcgtaatttgacacctggtaatacaaatacgcgcgtctctcgttactcgagtagtgc +gcgccataaattgcgccgaggggccgacggcactgctgagttaactactactgctgctacacggtttatgaa +ggatctccatttta---cagggactaat---ggcgttggtgaggttggccgtgggatagcgcttaccttgtt +taaccttgctgacacacttctcggcgggctcccgacagaattgatttcgtcggccggcggtcagctgtttta +ttcccgccccgtcgtctcagccaatggcgagccgacagtgaaactttacacctcagtcgagaatgcccagca +ggataaggggattgctatcccgcatgatattgatcttggtgagtcccgggttgttatccaagattatgacaa +ccaacatgagcaggaccgccctaccccctctccagccccctctcgtcctttttctgtgcttcgtgctaatga +tgtactttggctttc-----------------------------acttacggctgctgagtatgat------ +cagactacctatggctcttctactaaccctatgtatgtttctgatactgtgacgttcgt---caatgtggct +accggtgcccagggggtttcgcgctccttggactggtctaaggtcacccttgatgggcgcccactaactact +at-----ccagcagtactctaagactttctatgttt-tgcctcttcgtggtaagctctctttttgggaggcg +ggtaccactaag--gccggttatccttataattataatactactgctagtgatcagatcctgattgagaatg +cagctggccat------cgggtttgtat-ttctacctatactactaatttggg--------------ctctg +ggcctgtttctatttc-cgctgtcggtgtcctcgcacctcattctgcattggctgttttagaggacactgct +gact---------atcccgcccgcg----ctcacacctttgatgatttctgccctgagtgccgtgcgc---t +tggtcttcagggttgtgcttttcagtc--------aactgtggctgagttgcagcgtct------------- +--------taaaatgaaggtgggtaaaacccgggagtattgattta-tt----tt-gcct----------gt +gcct-tcct-------tt------ctgcc--tctt--t-ccttt--------------tact-t-------c +ttttttct----gcg----------------ttccgcgctccctg---------------------gaaaaa +aaaaaa------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>KC163335.1/17253/1-7253 |Hepatitis E virus isolate CHYT1, complete genome +----------------------------gcagacca-cgtatg-------------t-----ggtcgacgc- +---catggaggcccaccagtttataaaggctcctggcgtcactactgctattgag---caggcagctctagc +agcggccaactccgccttggcgaatgctgtggtggttcggccctttttgtcccggcttcagacggagattct +cataaatttgatgcagcctcggcagcttgttttccggcctgaggttttgtggaatcacccaatccagcgtgt +gatccataatgagcttgagcagta---ctgccgagccc-gggccggacgctgtcttgaggtgggtgctcacc +cacgttccattaacgacaaccctaacgtcctgcaccgctgctttcttaaacctgtcggccgcgatgttcagc +ggtggtataccgctcctacccgtggtcctgcagcaaattgtcggcggtccgccctccgcgggctaccgcctg +ttgaccggacttactgttttgatggcttttcaggctgcacattcgccgctgagacgggggttgcactctatt +cactgcacgacttgtggcccgccgatgttgcggaggcaatggcccgccatggcatgactcggctgtatgcag +cccttcatctt-cccccggaggtgttactccccccaggcacttaccataccacctcatacctcctaatccat +gatggggatcgtgcagtgattacatatgagggggactctagtgccgggtataatcatgatgtgtccatctta +cgtgcttggatccgcacgaccaaggtcaccggtgaccacccgctggtgattgagcgggtccgggctgtggga +tgtcattttgtcctcctcctcacagctgcacctgaaccgtcgccgatgccttacgttccatatcctcgctcg +actgaggtttatgttcgctctatttttggccctggt---------ggctcgccatccctctttccatctgcc +t----------gctcgaccaagtcaa-cgtttcatgccgtccctgtgcatatatgggacaggcttatgcttt +ttggggcgaccctcgatgatcaggccttttgctgttctcggcttatgacatacctccgcggcattagttata +aggtcacggttggcgcccttgttgctaatgaaggctggaacgcttccgaagatgcactgactgctgtaatca +ctgcagcctatttaaccatttgtcaccagagatacctccgcactcaggctatttccaaagggatgaagaggc +tggagcttgagcatgcacagaagtttataacacgcctttatagctggttatttgagaagtc---------tg +ggcgtgattacatccctggccgccagctgcagttttatgcccagtgccgccggtggttgtccgccggcttcc +accttgaccctcgggtacttgtatttgatgaggcggccccttgc---cgttgtcggagttttctccgcaa-- +----ggctgcccacaggttctgctgcttcatgcggtggcttggtcagga------ttgtacttgttttctcc +----------------agcccattgaggggagggtcggtgaacagggt--------tatgacaatgaggcat +ttgagggttcggatgttgaccccgctgaagaagctgttgtgagtatctctgggtcatatattgtcaccggca +gccagttgcagcccctctaccaagcactcggcctaccctccgaccttgccgctcgtgcgagccgacttaccg +ctacggttgaggtttctgatgctgatggacgtctcacctgtaagaccaccatgggtaataagacctttttaa +cagcctttactgatggcgcccagctggaggccaatgggcc------------------------tgagcagt +acgttttgtcacttgacctggcaaaacaaaccatggcagcgggcccgcacagtcttagttatactctgacac +ctgcgggccttgaggtgcatgtggtctcg-------gccgggcttgattgcaaggccgtctttccg---tcc +ggcgtagcggccccccctgctgctggggaggtatctgctttctgctcggccttgtacaggtttaaccgctgt +gttcaacggcactctcttattggaggcctatggtaccaccctgaggggcttgttggcctgtttccaccgttc +tcccccggtcatagctgggagtctgctaatcctttttgtggtgaaagcaccctttacacccggacctggtcg +gtctcgggcttctctagttgcttctcaccacttgaaccctgcgccccgagcgagttgccccccgtg---gag +gctggtaa----------acctgtggttttaaatac-ctcacct---------tcagagatt-----gtgga +gcaagtccagcccccggcc----cttgagccgg---cag--------------------cacctttatctga +cttag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttgataatagtgttagtcttactcct +cctagtgctccaact---------------gta-------------------ctcccggcgtcggcgccgtc +tgtaacccg--------------------------------------accatctgagcctcgccggcg---- +-----------------gttgcttcatacctaccctgacggctcaaaagtgtatgccggctctctttttgat +tctgagtgtacttggctagttaatgcttccaaccccggtcaccgccctggtggcggtctctgtcatgccttt +tatcaacggttcccagagtcgt------ttgaccccgccgagtttgtcatgtcagatgg---gtttgcggcc +tacactctgaccccccggcctattattcatgctgttgcccccgactatcgggttgaacataaccctaagcgg +cttgaggccgcctatcgggagacatgctcccgtcgagggacggctgcctaccccttgctcggcgccggcata +tatagagtccccgttgggttgagtttcgatgcctgggagcgtaaccatcgtcctggggatgaactgtacctg +actgagccagccatagct-------------------------------------------------tggtt +tgaggctaatcggcctaccct--------------------------------------------------- +------------------------------------------tcctgccttgactataactgaggatacggc +cc------------gcacagcgaatctggcgcttgagctgg------------atgcagccactgaagtagg +tcgtgcgtgc---gctggctgccgtgtggagcccggcgtggtccactatcaatttacggcgggtgtccccgg +ctctggtaagtccaggtcgattcaacagggggatgtggatgtgatagtggtgccaacccgtgagctgcgtaa +ctcttggcgtcgccgtgggttcgcagcctatacaccccacacggcggcccgtgtgacccgtggccgccgggt +tgtcatcgatgaggccccttcactcccaccgcatctgctcctgttgcacatgcagcgggcctcatcagtcca +cctcctcggtgaccccaaccaaatccctgctatcgattttgagaacgccggccttgtgccggcaatccggcc +cgagctggtccctacaaagtggtggcaccttacccatagatgtccggcggatgtctgtgagctaatccgcgg +tgcatacccgaagattcagactgcgagtcgcgtcctccgctctttgttttggggggaa------ccccctgt +gggtcaaaagctggtattcactcaggcggcgaaggctgcaaaccccggtgcgatcactgtccatgaagctca +gggtgcaacatttactgagactacgattatcgccacggcagatgctcgtgggctgatccagtcttctagagc +ccacgcaattgtggctctgactcgccatacggagaagtgtgtggtggttgatgcaccagggcttctccgtga +ggtaggtatttctgatgctattgttaataacttt------------------------------ttcctttc +tggcg--gtcagatcggccagcaccgcccatcggttataccgcgtggcactattgataataatgttgatac- +-----ccttgatgctttcccgccttcttgtcagtttagtgcttaccatcagctggccgaggagctcggccat +cggcccgccccaattgcagctgttctgcccccctgtccggagctcgagcagggcttactttatatgcctcag +gaactaacaacatcggatagtgtgctcacttttgagctcacggacatagtgcactgtcgcatggcagcgccc +agccagcgcaaagcggttctgtcaacccttgttggcaggtacggccgccgtaccaaactgtacgaggccgca +cacgcagatgttcgtgggtccctgaatcactttattcccgagctcggccccattaatgttaccacctgtgag +ctttacgagctcgtggaggctatggtggagaaaggccaggatgggtctgcagttctggagcttgatttgtgc +agccgtgatgtgtctcggataacattcttccagaaggattgtaataagtttacaacaggtgaaacgatagca +catggtaaagtcgggcaggggatatctgcatggagtaagaccttctgtgctctgtttggcccatggttccgc +gctattgagaaagaaattctggcagcgcttgcacctaacgtcttctacggtgacgcatatgaggatacagtt +ttggccgctgctgtcgccggtgcccctggctgcaag---gtctttgagaacgatttctctgagtttgatagc +actcaaaacaacttttcact------------------cgggttagagtgtataatcatggaggagtgcggc +atgccgcagtggatgatccggctctatcacctcgttcgttccgcctgggttctgcaggctccgaaggaatct +ctgcgaggcttctggaagaaacattccggtgagcccggcactctattgtggaacaccgtctggaacatggct +gtcatagcacactgttatgagttccgcgacctcaaagtcgcagcatttaaaggggatgattctgttgtgctt +tgtagcgattatcggcagagccgcgacgctgctgctttgattgctggctgtgggttgaagcttaaagtggac +tttaggcctattgggttgtatgctggtgtggttgtggccccgggccttgggactttgcctgatgttgttaga +tttgctggccggctctcggagaagaactgggggccaggcccggagagggcggagcagctccgactggccgtt +tgtgattttctgcgaaagttaacgaatgtggctcaggtttgtgtggacgttgtttcgcagg-------ttta +cggtgtcagccctggtttggtacataacctgattgggatgcttcagaccattgccgatggtaaggcacactt +taccgagacaattaaacctgttcttgaccttactagctccattatatatcgggtggaatgaataacatgttc +t----------------tttgctctgtgcatggag---------atgccaccatgcgctctcgggctcttct +gtttttgctcctcgtgcttttgcctatgttgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gtcgccgcgggcg-gcgcaacggcggtac +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgcatctgacattccagccgccgccggggctggagctcgccctc +ggccaccagcccg---------------cccactcggctccgcttggcgtgaccagtccca----------- +------gcgctccgccgcttcctcccgtcgtcgacctgcccca---------gctggggcttcgccgctgac +ggctgtggccccggcccctgacactgcgcctgtccctgatgttgattcccgtggcgccattttacgtcgcca +gtataatctgtccacatcccctctcacatctactatcgctaccggtactaatcttgtgctgtatgctgcccc +acttagtcctctgctaccgctccaggatggcactaacacccacattatggctactgaagcgtctaattatgc +ccagtatcgtgttgttcgtgccaccatccgatatcgtcccttggtgccgaatgccgttggtgggtatgctat +atctatctctttttggccccagacaacgactaccccaacttccgttgatatgaattcaattacctccactga +tgttcgtattcttgtccagcccggtatagcttctgagttggtgattcctagcgaacgcctgcactaccgaaa +ccagggatggcgttcggttgagacatctggtgtcgctgaggaagaagcgacttctggccttgttatgctctg +tattcatgggtcacctgtgaactcctacactaatacaccctacaccggcgccctcggcttacttgattttgc +actcgagcttgagtttcgcaatttaacacccggcaacactaatacgcgcgtttctcgttactcgagtagcgc +gcgccataaactgcgccgagggcctgatggtactgctgagttaactactactgctgccacacgctttatgaa +agatctccatttca---cgggaaccaat---ggtgttggtgaggtcggtcgtggtatagcgctaactttgtt +taatcttgctgatacacttctcggcgggcttccgacagaattgatttcgtcggctggaggtcagttattcta +ctcccgccccgttgtctcagccaatggcgagccaacagtaaaactttacacttcagtcgagaacgctcagca +ggacaagggtatagctattccacatgatattgaccttggtgagtcccgtgtggttattcaggactatgacaa +ccaacatgagcaagaccgtcccactccttctcctgctccctctcgccctttctctgttcttcgtgccaatga +cgtgctttggctttc-----------------------------acttactgctgccgagtatgat------ +caaacgacttatggttcctctaccaaccccatgtatgtttctgacactgtcacatttgt---taacgtggcg +actggtgcccagggggtctcgcgctctctggactggtctaaggtcactcttgatggtcgcccgctcactacc +at-----ccagcagtattctaagactttctatgttt-tgcccctccgtggtaagctctccttctgggaggcc +ggcactactaaa--gctggctacccctacaattataacaccactgctagtgaccagattctgattgagaatg +cagccggtcac------cgagtttgcat-ctctacctacactactaatttggg--------------ctccg +ggcccgtgtctatttc-tgctgttggtgtcctcgcccctcatactgcgctggctgttttggaggataccgtt +gact---------atcctgctcgcg----cccatacttttgatgatttctgccctgagtgccgtgcac---t +cggcctgcagggttgtgcctttcaatc--------tactgttgctgagctgcagcgtct------------- +--------caaaatgaaggtaggtaaaacccgggagtattgattta-tt----ct-gctt----------gt +gcc--ccc--------tt------ctgct--atgc-tt-ccttt--------------tatt-t-------c +tcttttct----gcg----------------ttccgcgctccctg---------------------gaaaaa +aaaaaaa---------------a------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>JQ026407.1/17212/1-7212 |Hepatitis E virus strain Inuyama, partial genome +---------------------------------------------------------------------gc- +---catggaggcccaccagtttattaaggctcctggcatcactactgccattgag---caggctgctctggc +tgcggctaattccgccttggcgaatgctgtggtggttcggccgtttctgtctcgtacccagactgacatact +cattaatttgatgcaaccccggcagcttgtgttccgtcctgaagttttgtggaaccatccgatccagcgagt +tatacataatgagctggagcagta---ctgccgagccc-gagctggtcgctgcctggaggtgggggcccatc +caaggtctattaatgacaaccccaatgtcttgcaccggtgttttcttcgcccggttgggagagatgtacagc +gctggtattctgccccgactcgcggcccggcagctaactgccgccgctccgcgttacgtggcttacctcctg +tcgaccgcacctactgcttcgacgggttttctcgctgtgcttttgccgctgagactggaattgccttatact +cattacatgacctttggcccgcagatgttgcggaggccatggcccgccatgggatgacacgcttgtatgcgg +ttcttcatcta-ccccctgaggttttattaccaccgggtacttatcacaccacctcttatttgctgattcac +gacggtgaccgtgttgtcgtaacttatgagggtgataccagtgcgggctataatcatgatgtgtctattctc +cgtgcatggattcgtacaactaagatagttggtgaccacccgttggtcatagagagggttcgtgctatcggc +tgccatttcgtgctgctcctcactgcagcccctgaaccatcccctatgccctatgtcccataccctcgttca +acagaggtgtatgtcaggtctatatttggccccggt---------gggtcgccttctctcttcccgtccgcc +t----------gctctactaaatcta-catttcatgctgttccagtccatatctgggaccggctcatgcttt +tcggcgccaccctagacgaccaagccttctgttgctcgcggcttatgacctatctccgcgggatcagttata +aggtgaccgttggtgcactcgtcgccaacgaaggctggaacgcctcggaggatgcgcttactgctgtgatca +ctgcggcgtatttgaccatctgccaccagcgctacctccgaactcaagccatatctaaaggcatgcgtcggc +tagaagtcgagcacgcccagaagtttatcaccagactttatagctggctgtttgagaaatc---------tg +gtcgcgactatattcctggccgtcaactccagttttatgcacagtgccgtcgctggctctccgccggtttcc +atttagatcctagagtccttgtctttgatgaggcagtcccttgt---cgctgtaggagctttttgaagaa-- +----ggttgctggcaagttttgttgctttatgaagtggctagggcaaga------atgcacctgttttttgg +----------------agccggctgaaggcttggtccgtgactgcggt--------catgataacgaggcct +atgaggattctgaggtagaccccgccgagcccgcctgcctcgatgtttccggaacctacgcagtccatggcc +gccagcttgaagccctatacagggcgcttaatattccacatgacattgcggcccgtgcatcgcgcttgacgg +ccaccgtggagctcaccgccagtccaggtcgccttgaatgccgtacgattctcgggaataagaccttccgca +cgtcgataactgatggcgctcaccttgaggtcaacggccc------------------------tgagcaat +atgttttaacatttgatgactctcgccaggccatgggagctgggccccatagtctcacatatgagctcaccc +ctgctggcctgcaggttaagatatcctcc-------aatggcttagattgtactgctgttttcccc---cct +ggtggggcgccaagcgccgcaccgggtgaggttgcagccttctgcagtgccttatataggtataacaggttt +actcagcgccactcgctaactggagggttgtggctgcaccctgaggggctcttaggtctgttccctcccttc +tcccccgggcacatttgggagtccgcaaatcctttttgtggtgagggtacactttacactcgaacctggtct +atatctggtttctctagtgacttttccccccctgaggcggctatcgctgccccagcccccgctgg----ggg +gttgcccccgagcactccctcctctgttagtggcgt-----------------ctgggcgtt---------- +---------tccgccaccc----tctgaggggt--------------cggcggctgccttgccgcttgcagc +ctcggt------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------------------------tagtaagcctgttagcttgcctgac +cctgctactcctaag-------------------------------------ccctccgttcgtaagccacc +tccatcgcc--------------------------------------accggctcgtacccgccggc----- +-------------------ttctctacacttaccccgatggagctaaggtttatgcaggctccttgttcgag +tcagattgtgattggctggttaatgcgtccaatccaggtcaccgccccggcggcggtctctgtcatgccttt +taccagcgctatcctgagtcgt------tccacccgactgattttattatgcgtgaggg---cctcgctgcg +tacaccttgatcccacgcccgatcattcatgctgtggctcctgactatagagttgagcagaaccctaagagg +ctggaggcggcgtatcgtgagacctgttcccgcctcggcacagccgcttacccactgctggggtctggtatt +taccaagtccctgtcggtttaagttttgacgcctgggagcgtaaccatcgcccaggcgatgagctctacctc +actgagcccgctgccgcg-------------------------------------------------tggtt +tgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------accggctttaacaatcacagaagatactgc +tc------------gcacggctaatctcgcgcttgagatcg------------attccgccaccgaggtggg +tcgtgcttgt---actggctgcactgttagccccgggattatccattatcagtttactgccggggtacctgg +ttctgggaagtctaggtctatacaacaaggggacgtcgatgtcgtggttgtgccaacccgcgagctccgtaa +tagttggcggcgccgtggttttgctgcttttacgccccacacggcagcccgcgtcactgccggccggcgtgt +tgtgatcgatgaggcgccctcgcttccgccacacctattactgcttcatatgcagcgtgcttcatcggtcca +ccttctcggcgaccccaaccagattcccgctattgattttgaacatgcaggcttggtgccggcaattcgccc +ggagcttgccccaaccacttggtggcacgtcacacatcgttgtccagccgatgtgtgtgagctcatacgtgg +ggcttaccccaagatccaaaccactagccgtgtcatgcgatctttgttttggaacgag------cctgcggt +aggccagaagttggttttcacgcaggccgccaaggcagccaaccccggcgcaattactgttcatgaggccca +gggcgctacattcacagagactactattatagccacggccgatgctagaggccttattcagtcatctcgtgc +acatgcaattgtcgcacttacccgccacacagagaaatgtgtcatcttggatgcccctggcctactgcgtga +ggttggtatctctgacataattgttaacaatttc------------------------------ttcttggc +cggcg--gtgaggtcggccaccaccgcccctctatcataccccgaggcaacccggaccagaatttagatac- +-----cttgcaggcattccccccatcttgccaaattagtgcctatcaccagctagctgaggagttaggccat +cgaccggccccagtggctgctgtactaccgccctgccctgaactcgagcagggtctactctatatgccacaa +gaacttacagcgtctgatagtgtcctggtttttgagcttacggacatagtccactgccggatggcggccccc +agccagcggaaggccgtcctttcaacgctcgtcggcaggtatggccgccgaacgaagctatatgaggcagcc +cattctgacgtccgtgagtctttagggagatttatccctaccatcggaccagtccaggccaccacatgtgag +ttgtatgagttggtagaggctatggttgagaagggccaggacggttctgctgtgttagagcttgatctctgt +agccgtgatgtttcacgtattacattctttcagaaggactgcaataaattcacaacaggtgagactatcgcc +cacggcaaggtggggcagggtatttcagcctggagcaaaaccttttgcgctctgtttggaccgtggttccgt +gccatcgagaaagagatcttagctctgctcccacccaacatcttctatggtgatgcttttgaagagtctgtg +ttctctgcagccatttgtggcgcgggttctagtatg---gtttttgagaatgatttctctgagtttgacagc +acccagaataatttctccct------------------cggcctcgagtgtgtcatcatggaagagtgtggc +ataccccagtggcttatccggttgtaccatttagttagatcggcctggaccctgcaggccccgaaggagtct +ttgaaaggtttttggaagaagcattctggtgagcccggtacactcctttggaacactgtctggaatatggcg +atcatagcgcattgctatgaattccgtgacctgagggtggcagcgttcaaaggggatgattcggtggtcctc +tgcagtggctaccgccagagtcgtaatgcggccgccctgattgctggctgtgggttaaaactgaaggttgac +taccgccctataggattgtatgccggtgttgttgtggccccgggtctcggggcactccctgacgttgtccgg +ttcgccggcaggctgtcggagaagaattggggcccgggcctcgaacgcgccgaacagttgcgtcttgcagtt +tgtgatttcctcagaaagttgacgaatgttgcgcaggtctgtgttgatgttgtgtctcgtg-------ttta +tggggttagtcctggcctggtacataatcttattggcatgctacagactatagccgatggaaaggctcactt +cactgagactgttaaacctgtactggatcttacaaattctattgtacaaaggttggaatgaataacatgtc- +g----------------tgtgcatcgcccatggg------------atcgccatgcgccctcgggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcagtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcttatcacaacccggggctggagctcgccctc +gacagccgccccg---------------cccccttggctcctcttggcgtgaccaatccca----------- +------gcgcccccctgctgccccccgtcgtcgatctgcccca---------actggggctgcgccgttaac +tgctgtttcccctgcgcctgatacggccccagtccctgatgttgattcccgcggtgctattttgcgccgtca +gtataatttgtctacttctcctctgacttcttctgttgcttctggcactaatcttgttttgtatgctgcccc +gcttaaccctcttctacctctccaggatggcactaatactcacatcatggcgactgaagcgtctaactacgc +ccagtatcgggttgttcgggctacaatccgttaccgccctctggtgccaaatgctgttggtggctatgcaat +ttctatttctttttggcctcagactacaaccacccccacctctgttgatatgaattccattacctctactga +tgttaggattttagtccagcccggtatagcctctgagttggtcgtcccgagcgagcgcctccattaccgcaa +ccaggggtggcgttctgttgagacatcgggcgtggccgaggaggaggcgacgtcgggtctggttatgctttg +tattcatggttctcctgtcaattcctataccaatacgccctatactggggcattgggacttcttgactttgc +acttgagcttgaatttaggaatctgacccccgggaacactaacacccgtgtgtcccggtacaccagcacagc +tcgccaccgcttgcgccgtggtgccgacggaactgccgagcttacgaccactgcggccacgcgcttcatgaa +ggatctgcatttta---ctgggacgaac---ggcgtaggcgaggtgggccgtggcatagccctaaccttatt +caaccttgctgacacacttctcggcggtttgccgacagaattgatttcgtcggccggaggccaactctttta +ctcccgtccagttgtctcagccaatggcgagccgactgttaaactatacacttccgtcgagaatgcacagca +ggacaagggcatcgccataccacatgacatagatttgggggattcacgtgtggttgtccaggactacgataa +ccagcaagaacaggataggcccaccccctcgccggctccgtctcgtcccttctcggttcttcgtgctaatga +tgttctgtggctttc-----------------------------cctcactgctgctgagtacgat------ +caaaccacttatggatctccgaccaaccctatgtatgtctcagacactgttacttttgt---taatgtggcc +acgggagcccaggctgtcgcccgttcccttgactggtctaaggttactttggatggtcgacctcttactact +at-----tcagcagtactctaagacattctatgtgc-tcccgcttcgcgggaagttatctttttgggaggct +ggcactaccaag--gccggttacccttataattatgacaccactgccagtgatcagattttgatagagaatg +cagccggtcac------cgtgttgccat-ctctacctacaccactagtcttgg--------------cgctg +gcccggtttctgtttc-tgcggttggtgttcttgccccgcattctgccttggctgtacttgaagatactatt +gatt---------accccgctcgcg----cccacacttttgatgacttctgccctgagtgccgtaatc---t +tggcctacagggctgtgcttttcagtc--------tactatcgctgaactccagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-ttt---ca-ccct----------gt +gccc-cct--------tc-tagg-ct-tt----gc-tt-tat-----------------ttc-t-------t +ttttttct----gct----------------ttccgcgctccctg---------------------gaaaaa +aa---------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>JX565469.1/17306/1-7306 |Hepatitis E virus isolate CMC1, complete genome +---------------------------ctcggtcca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcatcacaaccgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggttattcggccgtttttgtctcgaacacagactgagattct +cattaaccttatgcagccccggcaactggtttttcgcccagaggttttctggaatcatcctatccaacgtgt +aatacataatgagctagagcagta---ttgtcggtccc-gcgcggggcgctgccttgaagttggggctcacc +cgagatccatcaatgacaactcaaatatcttgcatcggtgcttcctccggcctgttggcagagacgtccagc +ggtggtattccgcccctactcgtggccctgctgctaattgtcgtcgctccgcgttgcgtggcctccctcctg +ttgaccgtacttactgttttgatgggttttccagctgcacgtttgcagctgagaccgggtttgctcttgact +ccctacatgacttgtggcccgctgatgttgcggaggcaatggcgcaccacgggatggcacgtctgtatgctg +tactgcacctc-cctcctgaggtcttactgccaccaggcacttaccacaccacctcctaccttctgattcac +gacggcagtcgtgctgtcgtgacttatgaaggtgatacaagtgctggttataaccatgatgtttctatcctc +cgcgcctggattcgtacgacaaaaatcaccggcgaccacccgctggtgatagagcgggtccgcgctattggc +tgccattttgtgttgttgcttactgccgcccccgaaccgtcgcccatgccttatgtccctttcccccgttcg +acagaggtgtttgtccgctcaatattcggcccgggc---------ggctcgccctctcttttcccgtcagct +t----------gctccacaaaatcta-cctttcacgccgtccctgtccatatttgggataggctcatgcttt +ttggcgccacgctggatgaccaggccttctgctgctcgcggcttatgacttaccttcgtggtattagctata +aagtcactgttggtgccctcgtcgccaacgagggttggaatgcttctgaggatgccctcactgcagtgatca +ccgcggcgtaccccaccatctgccaccagcgctacctccgcacccaggcgatttctaaaggtatgcgccggc +tggaggttgagcacgcccagaagtttatcaccaggctctatagctggctgtttgaaaagtc---------tg +gccgtgattatatccctggccgccagctccagttttatgcgcagtgccggcgctggctttctgccggctttc +atttggaccctagagtgcttgtttttgatgagtctgtgcactgc---cgttgtaggagttttgtaaagaa-- +----tgtggctaggaaggtttgctgctttatgaagtggcttggtcagga------gtgcacttgtttcttgg +----------------agcctgcagagggcctgataggtgaccagggc--------catgataacgaggctt +atgaggggtctgaggttgaccctgctgagcccgccccttctgatgtatcggggacctatactgtccacgggc +aactgttggtagatttatatagggcactcaacgttccgcatgatattgctgcccgagccgcacgtttgtcgg +ccactgtcgagcttgccgccggtccagggcggcttgagtgccgtactattttgggcaacaagaccttccgca +ctacgattactgacggtgcccaattggaggcaaatggccc------------------------tgagcagt +atgtcctttcatttgatgaagcccgccagtgtatgggtgccgggccgcatagccttgtgtatgagctcaccc +ccagtgggctgcaggttaaaatttcatct-------aatggtttagactgtgtggcagtcttcccc---cct +gggagggccccgagtgtcggggccgcagaggttacggccttctgtagcgccttgtatagatacaacaggacc +atccagcggcactcgattgttggcgggctatggttacacccagaggggttgctaggtcttttcccacctttc +tccccaggccatttttgggagtctactaacccgttttgtggtgagggaactctttacaccagaacctggtcc +acgtctggcttctctagtgatttttcgccacctgaggcgactgccggcgccccccctcctgttgac------ +-ctgccttccaaaccggctcctcctgagattgccgt-----------------tcgagcccc---------- +---------gtcaccaccc---------------------------------------------cccgtggc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------------ggcctattggcccaccta-- +-tagctgcgcccgga-------------------------------------ccctctgctcataagccacc +ggcgcaggc--------------------------------------ttcggctcgtaaccgtcgcc----- +-------------------ttctttacacctacccagatggtgctaaggtttattcagggtctttgtttgag +tctgattgtgactggctggttaacgcgtctaaccccggccaccgcccgggcggcggcctctgtcatgccttt +taccaacgtttcccccagtctt------ttgaccataccaagtttattatgcgggacgg---gctggctgct +tacaccctgacacctcgcccgatcattcatgcagttgcccctgattatagagttgcccataaccctaaaagg +ttggaagcagcataccgtgagacttgttctcgccttggtactgccgcttacccgctgctgggctcgggtatc +tatcaggtccctgttggcccgagctttgatgcctgggagcgaaaccatcgacccggggatgaactttatctc +accgagcctgcaacagct-------------------------------------------------tggtt +tgaggccaataggcctgcccggcctcctacacctacaactcatgatacggccccggctgatcaccctgcaac +cggggccggccctcgacctgaggctgataccggtccggcactgcccgccctgactataacagaggatgcagc +tc------------ggacggccaaccttgccttggaaatcg------------actccaggactgagctagg +ccgtgcctgc---gccggctgcactgttagccctggggttgttcgctatcaattcactgcgggcgttcctgg +gtccggtaaatcgaggtctatacagcagggtgatgttgatgtggtggttgtgcccacccgcgagcttcgcaa +tagttggcgccgccgcgggtttgctgcatttacgccccactcggccgcccgtgttactagcggccggcgtgt +tgtaatcgatgaagcaccatccctcccgccccacctgctcttactgcatatgcagcgtgcttcatcagtgca +tcttcttggcgacccgaaccagattcccgcaattgattttgagcatgctggtcttgtccccgcaatccgtcc +tgagctcgcccccaccagctggtggcatgtcacgcaccggtgccctgcggatgtctgcgaacttctacgtgg +ggcgtatcccaagattcagactaccagccgtgtgctgaggtctctgttctggggtgac------ccccccgt +tggccagaagttggttttcacgcaagccgcaaaagcagccaatcctggtgcgatcactgttcatgaggccca +gggggctacattcactgagaccactattatcgcgacggctgatgcaagaggcctcattcagtcgtcccgggc +gcatgccattgtcgctctcacccgacacacagaaaaatgtgtcattttggacgccccggggctgctccgcga +ggtgggcatatcagatgtgatagttaataatttc------------------------------tttttagc +tggcg--gtgagattggccatcaccgcccctctgttataccccgcggcaacccagatcgaaacttagacac- +-----ccttcaggcctttccgccctcttgccagattagcgccttccaccagctggccgaggagcttggtcac +cggcccgcgcctgtggcagccgtcctcccgccctgccctgagctcgagcagggcttgctctacatgccgcag +gagctcacagtgtctgatagtgtcttggtctttgagttaactgatatagtccattgccgtatggctgccccc +agccagcggaaagccgtcctttccacgctcgttgggcgttacgggcgtcggacgaagttatatgaggctgcc +cactcagacgtgcgcgagtcacttacaaggtttatccccaccatcggccctgtgcaggccacgacgtgcgag +ctttatgagctggttgaggcgatggtggagaaaggtcaggatgggtcagcagtgctcgagcttgacctctgt +agccgagacgtgtctcgcataacgttcttccagaaggactgtaataagttcacaaccggggagacgattgcc +catggcaaagtagcccagggaatatcagcttggagcaagaccttttgcgctttatttggtccctggttccga +gctattgagaaaaaggtaatactcttgctcccgcccaacatcttttacggtgatgcttacgaggattccgtg +ttctccgctgccgtcaccggtgcggggtcgagtatg---gtttttgagaatgacttttccgagtttgacagc +acccagaataacttctcact------------------cggccttgaatgtgtgattatggaggagtgtggc +atgccccaatggttagttagattataccacctggtgcgatcttcctggatcctacaggccccaaaggaatct +ctaaaaggcttttggaagaagcactccggcgagcccggtacactactctggaataccgtttggaacatggcg +gttatagcacattgctatgagttccgtgactttagggttgccgcgtttaaaggggatgactcggtggtcctt +tgtagtgattatcgccagagtcgattcgcggcggcattgattgcaggctgtgggctcaagcttaaggtcgac +taccgccctatcgggctttatgccggagttgtggttgcccccggtcttggagcgttgcccgacgtcgtccgg +ttcgccggtcggctgtcagaaaagaactggggccccggccccgaaagagcggagcagttacgcttagccgtc +tgtgactttttgagaaagttgacgaacgttgctcaggtttgcgttgatgttgtgtcgcgtg-------ttta +tggggtgagccctgggcttgtacataaccttattggcatgttacaaactattgccgatggtaaagcccacta +cactgaaactgtgaagcctgtgttagacctcacaaattctattgtgcagaggttagaatgaataacacgtt- +t----------------tctgcatcgcccatggg------------atcgccatgcgctctggggctgtttt +gctgctgctcttcgtgtgtatgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagtcgactgccc------------gccgtcgtgggcg-gcgcggcggcggttc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctattttcat---- +--------------ccaaccaacaccttcgccgctgacgttgactcacattccgggtctggagcccgacccc +ggcacccggcccg---------------cccccttggcacttcttggcgtgacttgtccca----------- +------gcgcccccccgctgcctcgcgccgtcgatctacccca---------actggggctgcgccgttgac +tgccgtttcacccgcacctgacacggcgcctgtcccggatgtcgactctcgcggggctattctgcgtcgcca +gtataatctctcaacctcgcctttactactcactgttgcctcaggcactaatcttgttctgtatgctgcgcc +gcttaacccccttctgcccctccaggatggcactaatactcacatcatggcgaccgaggcatctaattacgc +ccaataccgagttgtccgggccacaatccgctaccgccctttggtgccggtcacagttggcggttatgcaat +ctctatctctttctggccccagactaccactacccccacctctgttgatatgaattcaattacttcaactga +tgttaggattcttgttcaacccggcctagcctccgaactcgtcataccaagtgagcgtctccactatcgtaa +tcagggttggcgctctgtggagacttctggcgtggctgaggaggaggctacttccgggcttgtcatgctttg +tatccatggttcccctgttaattcatacactaataccccttacactggggccttgggccttctcgattttgc +gcttgagattgaatttcggaatctgaccccagggaacactaatacacgtgtctcccgttataccagcactgc +ccgccatcgcctgcgccgcggtgctgacgggactgccgaacttacaactacagcggccacacggtttatgaa +agacctccacttca---ctgggatgaac---ggggtcggtgagattggccgtggcatagccctgacgctgtt +caacatagctgatacacttcttggtggcctgccgacagaattaatttcgtcggccgggggtcaggtattcta +ctcccgccctgtcgtctcagccaatggcgagccgactgtcaagttgtatacatcagttgagaatgcacagca +ggacaaagggatcacaatacctcatgacatcgacctaggtgattcccgtgttgttatccaggactatgataa +tcagcatgagcaagatcggcccaccccgtcaccggctccttctcgtcctttttccgttctccgcgctaacga +tgtgttgtgggtttc-----------------------------attgaccgctgctgagtatgac------ +cagactacatatggttcgtcgactaaccctatgtacgtctcagacactgtgacatttgt---caatgtggca +acaggtgctcaggccgtcgctcgctcccttgattggactaaagtgactttggatgggcggccgctcactacc +at-----ccagcagcattctaaaatattttatgttc-tccctctgcgcggcaagctctccttttgggaggct +ggcaccactaag--gctggctacccttacaactataacactacagccagcgaccaaattttgatagagaacg +cggctgagcat------cgtgttgctgt-ctcaacttacactacgagcttggg--------------tgctg +gccctgtgtctatctc-tgcagttggtgtgctcgctccgcactctgtcttggcagtccttgaggataccgtt +gatt---------accctgcccgtg----ctcatacttttgatgatttctgccctgagtgtcgtactc---t +tggcctgcagggctgtgcttttcagtc--------cactgttgccgagctccagcgtct------------- +--------taagatgaaggtgggtaaaacccgggagttttaattaa-tt----tt-tact----------gt +gccc-tcct-------tc-tatg-ctgat---tgt-tt--------------------tatt-t-------c +ttatttct----gcg----------------tttcgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------aa---------------------------- +------------------------------------------------------------------------ +----------- +>JF443722.1/17206/1-7206 |Hepatitis E virus isolate INDHEVFHF12003, complete genome +--------------------------aggcagacca-catatg-------------t-----ggtcgatgc- +---catggaggcccatcagtttatcaaggctcctggcatcactactgctattgag---caggctgctctagc +agcggccaactctgtcctggcggatgctgtggtaggtaggccttttctctctcatcagcagattgagatcct +cattaacctaatgcaacctcgccagcttgttttccgccccgaggttttctggaatcaccccatccagcgtgt +catccataatgagctggagcttta---ctgccgcgccc-gctccggccgctgccttgaaattggcgcccatc +cccgctcaataaatgacaatcctaatgtggtccaccgctgcttcctccgccctgttgggcgtgatgttcagc +gctggtatactgcacccactcgcgggccggctgctaattgccggcgttccgcgctgcgcgggctccccgctg +ccgaccgcacctactgcttcgacgggttttccggctgtaattttcccgccgagacgggcgtcgccctctatt +ccctccacgatatgtcaccatctgacgtcgccgaggccatgtctcgtcatggtatgacgcggctttatgccg +ccctccatctt-ccgcctgaggttttgctgccccctggcacataccgcaccgcatcgtatttgctgattcat +gacggcaggcgcgttgtggtgacgtatgagggtgacactagtgctggttataaccacgatgtctccaacctg +cgctcctggattagaaccaccaaggttactggagaccatccccttgtcattgagcgggtcagggctattggc +tgccattttgttctcttgcttacggcggcccgggagccatcacctatgccttatgtcccttacccccggtct +accgaggtttatgtccgatcgatcttcggcccgggt---------ggtactccctccttattcccgacctca +t----------gctccactaagtcca-ctttccacgctgtccctacccatatctgggaccgtcttatgttgt +tcggggccaccctggacgaccaagccttctgctgctcccgtttaatgacctatcttcgcggcattagctaca +aggttactgtgggtacccttgtggccaacgaaggctggaacgcctctgaggacgccctcacagctgtcatca +ccgccgcctaccttaccatttgtcaccagcggtacctccgcacccaggctatatctaaagggatgcgtcgcc +tggagcgggagcatgcccagaagtttataacacgtctctacagctggctcttcgagaagtc---------cg +gtcgtgattacatccccggccgccagttggagttctacgcccagtgtaggcgctggctttcggccggcttcc +atcttgacccacgggtgttggtttttgacgagtcggccccctgc---cattgcaggaccacgatccgtaa-- +----ggctctctcaaagttctgctgctttatgaagtggcttggtcagga------gtgtacttgtttccttc +----------------agcctgcagaaggcgtcgttggcgaccagggc--------catgataatgaggcct +atgaggggtccgatgttgaccccgctgagtccgctattagtgatatatctgggtcctatgtcgtccctggcg +cggccctccaacctctttaccaggccctcgatctccccgctgagattgtggctcgtgcgggtcggctgaccg +ccacagtaaaggtctcccagatcgatgggcggatcgattgtgagacccttcttggtaacaaaaccttccgca +cgtcattcgttgacggggcggtcttagagaccaatggccc------------------------ggagcgcc +acaatctttcctttgatgccagtcagagcactatggctgctggccctttcagtcttacctatgccgcctctg +cggctgggctggaggtgcgttatgttgct-------gccgggcttgaccaccgggcgggttttgcc---ccc +ggagtttcaccccggtcagcccctggcgaggtcaccgccttttgctccgccctatacaggttcaatcgtgag +gcccagcgccattcgctgaccggtaatttatggtttcatcctgaggggcttcttggtctctttgccccattt +tcacccgggcatgtctgggagtcggctaatccattctgtggcgagagcacactatatactcgtacctggtcg +gaggttgacgccgtctctagtccggcccggcccgacttaggttttatgtctgagccttctatacctagtagg +gccaccac----------------------------acccat-----------ccccgcggc---------- +---------ccctctacct----tcctctgcac--------------cggacccttcccctcccccctctgc +cccgg------------------------------------------------------------------- +-------------------------------------------------------------cgc-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttgacgagccggcc------tctggc +attaccgc-----------------cgg------------------------ggccccggccataacccacc +aga----------------------------------------------cggcccggcaccgccgcc----- +-------------------tgctctttacctacccggatggctctaaggtatttgccggctcgctgttcgag +tcgacatgcacgtggctcgtcaacgcgtctaatgccgaccaccgtcctggcggcgggctttgccatgcattt +taccaaaagtaccccgcctcct------tcgacgccgcctcttttgtgatgcgcgacgg---cgcggccgcg +tacacattaaccccccggccaataattcatgctgtcgctcctgattataggttggaacataacccaaagagg +cttgaggctgcttatcgggagacttgctcccgcctcggtaccgctgcatacccgctcctcgggaccggcata +taccaggtgccgatcggccccagttttgacgcctgggagcggaatcaccgccccggggatgagctgtacctc +cctgagcttgctgccaga-------------------------------------------------tggtt +tgaggccaatcggccgacccg--------------------------------------------------- +------------------------------------------cccaactctcactataaccgaggatgttgc +ac------------ggacagcgaatctggctattgagctgg------------actcagccacagatgtcgg +ccgggcctgt---gccggctgtcgggtcacccccggcgttgttcagtaccagtttactgctggtgtgcctgg +atccggcaagtcccgctctatcactcaagccgatgtggacgttgtcgtggtcccgacgcgcgagttgcgcaa +tgcctggcgccgccgcggcttcgctgctttcaccccgcacacagccgctagggtcacccaggggcgccgggt +tgttattgatgaggctccgtctctccctcctcacctgctgctgctccacatgcagcgggccgccaccgtcca +tctcctcggcgacccgaaccagatcccagccatcgactttgagcacgctgggcttgttcccgccatcaggcc +cgatctagcccccacctcctggtggcatgtcacccatcgctgccctgcggatgtgtgtgagctgatccgcgg +tgcataccccatgatccagaccactagccgggtcctccgttcgttattctggggtgag------cctgccat +tgggcagaaactagtgttcacccaggcggctaaggccgccaaccccggctcagtgacagtccacgaggcaca +gggcgctacctacacggagaccaccattattgccacggcagatgcccgaggccttattcagtcgtcacgggc +tcacgccatcgttgctctgacgcgtcacactgagaagtgcgtcatcattgatgcaccgggcctgcttcgcga +ggtgggtatctccgatgcaatcgtcaataacttt------------------------------ttcctcgc +tggtg--gcgaaattggtcaccagcgcccatctgttattccccgtggcaatcctgatgccaatgttgacac- +-----cctggctgcctttccgccgtcctgccagattagtgcctttcatcagctggctgaggagcttggccac +agacctgcccctgttgcagctgttttaccaccctgccctgagcttgaacagggcctcctctacctgccccag +gaactcaccacctgtgatagcgttgtaacatttgaattaacagatatcgtgcactgccgcatggccgctccg +agccagcgcaaggctgtgctgtccacactcgtgggccgctacggccgtcgcacaaagctttacaacgcctcc +cattctaatgttcgcgactctctcgcccgttttatccccgccattggccccgtacaggttacaacttgtgaa +ttgtatgagctagtggaggccatggtcgagaagggccaggatggctccgccgtccttgagctcgacctttgc +aaccgtgacgtgtccaggatcaccttctttcagaaagactgtaataagttcaccacgggcgagaccattgcc +catggtaaagtgggccagggcatctcggcctggagcaagaccttttgcgccctctttggcccttggttccgt +gctattgagaaggctattctggccctgctccctcagggtgtgttttacggtgatgcctttgatgacaccgtc +ttctcggcggctgtggctgcagcaaaggcatccatg---gtgtttgagaatgacttttctgagtttgactcc +acccagaataatttctctct------------------aggcctagagtgtgctattatggaggagtgcggg +atgccgcagtggctcatccgtttgtaccaccttataaggtctgcgtggatcctgcaggccccgaaggagtcc +ctgcgggggttctggaagaaacactccggtgagcccggcactctcctatggaacactgtctggaatatggcc +gttattacccactgctatgacttccgcgatttgcaggtggctgctttcaaaggtgatgattcgatagtgctt +tgcagtgagtaccgtcagagcccgggagctgctgtcctgatcgccggctgtggcttaaagttgaaggtagac +tttcgcccgattggtttgtatgcaggtgttgtggtggcccctggcctcggcgcgcttcctgatgttgtgcgc +tttgccggccggcttactgagaagaattggggccctggccctgagcgggcggagcagctccgccttgctgtg +agtgattttctccgcaagctcacgaatgtagcacagatgtgtgtggatgttgtttcccgtg-------ttta +tggggtttcccctgggctcgttcataacctgattggcatgctacaggctgttgctgatggcaaggcccattt +cactgagtcagtgaagccagtgctcgacctgacaaattcaatcctgtgtcgggtggaatgaataacatgtc- +t----------------tttgctgcgcccatgggt---------tcgcgaccatgcgccctcggcctatttt +gctgctgttcctcatgtttctgcctatgctgcccgcgc---------------------------------- +-caccgc------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggttc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----c---cccctatattcat---- +--------------ccaaccaaccccttcgcccccgatgtcaccgctgcggccggggctggacctcgtgttc +gccaacccgcccg---------------accactcggttccgcttggcgtgaccaggccca----------- +------gcgccccgccgctgcctcacgtcgtagacctaccaca---------gctggggccgcgccgctaac +tgcggtcgctccggcccatgacaccccgccagtgcctgatgtcgactcccgcggcgccatcttgcgccgtca +gtataacctatcaacatctcccctcacctcttccgtggccaccggcactaacctggttctttatgctgcccc +tcttagtccgcttttacctctccaggacggcaccaatactcatataatggccacggaggcttctaattatgc +tcagtaccgggttgcccgtgccacaatccgttaccgcccgctggtcccaaatgctgtcggcggctatgccat +ctccatctcattctggccgcagaccaccaccaccccgacgtccgtcgatatgaattcaataacttcgacgga +tgttcgcattctagtccagcccggcatagcctctgagcttgtgatcccaagtgagcgcctacattatcgcaa +ccaaggttggcgctccgtcgagacctccggggtggctgaggaggaagctacctctggtctcgttatgctttg +catacacggttcacccgtaaattcttatactaacacaccttataccggtgccctcgggctgttggacttcgc +tcttgagcttgagttccgcaaccttacccccggtaacaccaacacgcgggtctcccgttattccagcactgc +tcgccaccgccttcgtcgcggtgcggacgggactgccgagcttaccaccacggctgctacccgcttcatgaa +ggacctttatttta---ctagtactaat---ggtgttggtgagatcggccgcgggatagcccttaccctttt +caaccttgctgacactctacttggtggcctgccgacagaattgatttcgtcggccggtggccagctgttcta +ctcccgccccgttgtctcagccaatggcgagccgactgttaagctgtatacatctgtagagaacgctcagca +ggataagggtattgcaatcccgcatgatattgacctcggagaatcccgtgtggttattcaggattatgataa +tcaacatgaacaagaccggccgacgccctctccagccccgtcgcgccctttctctgtccttcgagctaatga +tgtgctttggctctc-----------------------------tctcaccgctgccgagtatgac------ +cagtccacttatggctcttcgactggcccagtttatgtttctgactctgtgaccctggt---taatgttgcg +accggtgcgcaggccgttgctcggtcgctcgattggactagggtcacacttgatggtcgccccctttccacc +at-----ccagcagtactcgaagaccttctttgtcc-tgccgctccgcggtaagctctctttctgggaggca +ggtacaactaag--gccgggtatccctataattataacaccactgctagcgaccaattgctcgttgagaatg +ctgccgggcac------cgggtcgctat-ttctacttacaccactagcctggg--------------tgccg +gccctgtttccatttc-cgcggttgctgttttagccccccactctgcgctagcactgcttgaggataccttg +gact---------accctgctcgcg----cccatacttttgatgacttctgcccagagtgccgccccc---t +tggcctccagggctgcgctttccagtc--------tactgtcgctgagctccagcgcct------------- +--------taagatgaaggtgggtaaaactcgggagttatagttta-ttt------gctt----------gt +gcccccct--------tc------actctg------tt-----------------gcttatt-t-------c +tcatttct----gcg----------------ttccgcgctccctg---------------------aaaaaa +aaaaaaa---------------aa------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>JF443724.1/17206/1-7206 |Hepatitis E virus isolate INDHEVFHF32005, complete genome +--------------------------aggcagacca-catatg-------------t-----ggtcgatgc- +---catggaggcccatcagtttatcaaggctcctggcatcactactgctattgag---caggctgctctagc +agcggccaactctgccctggcgaatgctgtggtagttaggccttttctctctcaccagcagattgagatcct +cattaacctaatgcaacctcgccagcttgttttccgccccgaggttttctggaatcaccccatccagcgcgt +catccataatgagttggagcttta---ctgccgcgccc-gctccggccgctgccttgaaattggcgcccacc +cccgctcaataaatgataatcctaatgtggtccaccgctgcttcctccgccctgttgggcgtgatgttcagc +gctggtatactgcacccactcgcgggccggctgctaactgccggcgttccgcgctgcgcgggcttcccgctg +ccgaccgcacttactgcttcgacgggttttctggctgtaactttcccgccgagacgggcattgccctctatt +cccttcacgatatgtcaccatctgatgccgccgaggccatgtcccgccatggtatgacgcggctttatgccg +ccctccatctt-ccgcccgaggtcttgctgccccctggcacataccgcaccgcatcgtatttgctgattcat +gacggcaggcgcgttgtggtgacgtatgagggtgacactagtgctggctacaaccacgatgtctccaacctg +cgctcctggattagaaccaccaaggtcactggagaccaccccctcgttatcgagcgggtcagggccataggc +tgccactttgtcctcttgcttacggcggccccggagccatcacctatgccttatgtcccttacccccggtct +accgaggtctatgttcgatcgattttcggcccgggt---------ggtactccttccttattcccaacctca +t----------gttcgactaagtcca-ccttccacgccgtccctacccatatttgggaccgtcttatgttgt +tcggggccaccctggacgaccaagccttttgctgctcccgtttaatgacctatcttcgcggcattagctaca +aggtcactgtgggtacccttgtggctaacgaaggctggaacgcctctgaggacgccctcacagctgtcatca +ccgccgcctaccttaccatttgtcaccagcggtacctccgcacccaggctatatctaaagggatgcgtcgcc +tggaacgggagcatgcccagaagtttataacacgtctctacagctggctcttcgagaagtc---------cg +gccgtgattacatccccggccgtcagttggagttttacgcccagtgtaggcgctggctttcggccggcttcc +atcttgagccacgggtgctggtttttgacgagtcggccccctgc---cactgcaggactgcgatccgtaa-- +----ggctctctcaaagttctgctgctttatgaagtggcttggtcagga------gtgtacttgtttccttc +----------------agcctgcagaaggcgtcgttggcgaccagggc--------cacgataatgaggcct +atgaggggtccgatgttgaccccgctgagtccgccgttagtgatatatctgggtcctatgtcgtccttggca +cagccctccaacctctttaccaggccctcgatctccccgctgagattgtggctcgtgcgggtcggctgaccg +ccacagtaaaggtctcccagaccgatgggcggatcgactgtgagacccttcttggtaacaaaatcttccgca +cgtcattcgttgacggggcggtcttagagaccaatggccc------------------------ggagcgcc +acaatctttcttttgatgacagtcagagcactatggccgctggccctttcagtctcacctatgccgccactg +cagctgggctggaggtgcgttatgttgct-------gccgggcttgaccaccgggcggtttttgcc---ccc +ggagtttcaccccggtcagcccctggcgaggtcaccgccttttgctctgccctatacaggttcaatcgtgag +gcccagcgccattcgctgaccggtaatctatggtttcatcctgaggggctccttggcctcttcgccccgttt +tcacccgggcatgtctgggagtcggctaatccattctgtggcgagagcacattatatactcgcacttggtcg +gaggttgacgccgtctctagtccggcccggcctgatttgggttttatgtctgagccttctatacctagtagg +gccgccac----------------------------acctat-----------ccccgcggc---------- +---------ccccctacct----tcctccgcac--------------cggatccatcccctccttcttctgc +cccgg------------------------------------------------------------------- +-------------------------------------------------------------cgc-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcgatgagccggct------tctgct +actaccgc-----------------cgg------------------------ggccccggccataacccacc +aga----------------------------------------------cggtccggcaccgccgcc----- +-------------------tgctctttacctacccggatggctctaaggtgtttgccggctcgctgttcgag +tcgacatgtacgtggcttgtcaacgcgtctaatgttgaccaccgtcctggcggcgggctttgccatgcattt +taccaaaggtaccccgcctcct------ttgatgccgcctcttttgtgatgcgcgacgg---cgcggccgcg +tacacattaacccctcggccaataattcatgctgtcgcccctgattataggttggaacataaaccaaagagg +cttgaggctgcttatcgagagacttgctcccgcctcggcaccgctgcatacccgctcttcgggaccggcata +taccaggtgccgatcggccccagttttgacgcctgggagcggaatcaccgccccggggatgagttgtacctc +cctgagcttgctgccaga-------------------------------------------------tggtt +tgaggccaatcggccgacccg--------------------------------------------------- +------------------------------------------cccaactctcactataaccgaggatgttgc +ac------------ggacagcgaacctggccatagagctgg------------actcagccacagatgtcgg +ccgggcctgt---gccggctgccgggtcacccccggcgttgttcagtaccagtttactgctggtgtgcctgg +atccggcaagtcccgctctattactcaagccgatgtggacgttgtcgtggtcccgacgcgcgagttgcgcaa +tgcctggcgccgccgtggcttcgctgctttcactccgcacacagccgctagagtcacccaggggcgccgggt +tgttattgatgaggctccgtcactccctcctcacctgttgctgctccacatgcagcgggccgccaccgtcca +tctccttggcgacccgaaccagatcccagccatcgactttgagcacgctgggcttgttcccgccatcaggcc +cgacttggcccctacctcctggtggcatgtcacccatcgctgccctgcggatgtatgtgagctgatccgtgg +tgcataccccatgatccagaccactagccgggtcttccgttcgctattctggggcgag------cctgccat +tgggcagaaactagtgttcacccaggcggctaaggccgccaaccccggctcagtgacagtccacgaggcaca +gggcgctacctatacggagaccaccattattgccacggcagacgcccgaggccttattcagtcgtcccgggc +tcatgccatcgttgctctgacgcgccacactgagaagtgcgtcatcattgacgcaccgggcctgcttcgcga +ggtgggcatctccgatgcaatcgtcaataacttt------------------------------ttcctcgc +cggtg--gcgaagttggtcaccagcgcccatctgttattccccgtggcaatcctgatgccaatgttgacac- +-----cctggctgcctttccaccttcttgccagattagtgcctttcatcagctggctgaggagctcggccac +agacctgcccctgttgcagctgttttaccaccctgccccgagcttgaacaaggcctcctctatctgccccag +gaactcaccacctgtgatagcgtcgtaacatttgaattaacagatattgtgcactgccgcatggccgccccg +agccagcgcaaggccgtactgtccacactcgtggaccgatacggccgtcgcacaaagctttacaatgcctcc +cactctgatgttcgcgactctctcgcccgttttaccccggccattggccccgtacaggtcacaacctgtgaa +ttgtacgagctagtggaggccatggtcgagaagggccaggatggctccgccgtccttgagctcgacctttgc +aaccgtgatgtgtccaggatcaccttcttccagaaagattgtaacaagttcaccacgggcgagaccattgcc +catggtaaggtgggccagggcatttcggcctggagcaagaccttttgcgccctctttggcccttggttccgt +gctattgagaaggctattctggccctgctccctcagggtgtgttttatggtgatgcctatgatgacaccgtc +ttctcggcggctgtggctgcagcgaaggcatccatg---gtgtttgagaatgacttctctgagtttgactcc +acccagaataatttctcttt------------------aggcctagagtgtgctattatggaggagtgcggg +atgccgcagtggctcatccgtttgtatcaccttataaggtctgcgtggatcctgcaggccccgaaggagtct +ctgcgggggttttggaagaaacactccggtgagcccggcactcttctatggaatactgtctggaatatggct +gttattacccactgttatgacttccgcgatttgcaggtggctgccttcaaaggtgatgattcgatagtgctt +tgcagtgagtaccgtcagagcccgggggccgctgtcttgatcgccggctgtggcttaaagttgaaggtagac +tttcgcccgattggtttgtatgcaggtgttgtggtggcccctggccttggcgcgcttcctgacgttgtgcgc +ttcgccggccggcttaccgagaagaattggggccctggccctgagcgggcggagcagctccgcctcgctgtg +agtgattttctccgcaagcttacgaatgtagcacagatgtgtgtggatgttgtttcccgtg-------ttta +tggggtttcccctgggctcgttcataacctgattggcatgctacaggctgttgctgatggcaaggcacattt +cactgagtcagtaaagccagtgctcgacctgacaaattcaatcctgtgtcgggtggaatgaataacatgtc- +t----------------tttgctgcgcccatgggt---------tcgcgaccatgcgccctcggcctatttt +gctgctgctcctcatgtttctgcctatgctgcccgcgc---------------------------------- +-caccgc------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggttc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----c---cccctatattcat---- +--------------ccaaccaaccccttcgcccccgatgtcaccgctgcggccggggctggacctcgtgttc +gccaacccgtccg---------------accactcggctccgcttggcgtgaccaggccca----------- +------gcgccccgccgctgcctcacgtcgtagacctaccgca---------gctggggccgcgccgctaac +cgcggtcgctccggcccatgacaccccgccagtgcctgatgttgactctcgcggcgccatcctgcgccgtca +gtataacctatcaacatctcccctcacctcttccgtggccaccggtactaatctggttctctatgccgcccc +tcttagtccgcttttacccctccaggacggcaccaatactcatataatggccacggaggcttctaattatgc +ccagtaccgggttgcccgtgccacaatccgttaccgcccgctggtcccaaatgctgtcggcggttacgccat +ctccatctcattctggccgcagaccaccaccaccccgacgtccgtcgatatgaattcaataacttcgacgga +tgttcgtattttagtccagcccggcatagcctctgagcttgtgattccaagtgagcgcctacactatcgcaa +ccaaggttggcgctccgtcgagacctccggggtggctgaggaggaagctacctctggtctcgttatgctttg +catacacggttcacccgtaaattcctacacaaatacaccctataccggtgccctcgggctgttggacttcgc +cctcgagcttgagttccgcaaccttacccccggtaacaccaatacgcgggtctcccgttattccagcactgc +tcgccaccgccttcgtcgcggtgcagacgggactgccgagctcaccaccacggctgctacccgctttatgaa +ggacctttatttta---ctagtactaat---ggtgttggtgagatcggccgcgggatagcccttaccctttt +caacctcgctgacactctgcttggtggcctgccgacagaattgatttcgtcggctggtggccagctgttcta +ctcccgccccgttgtctcagccaatggcgagccgactgttaagctgtacacatctgtggagaacgctcagca +ggataagggtattgcaatcccgcatgatattgacctcggagaatcccgtgtggttattcaggattatgataa +tcaacatgaacaagaccggccgacgccttctccagccccgtcgcgccctttctctgtccttcgagctaatga +tgtgctctggctctc-----------------------------tctcaccgctgccgagtatgac------ +cagtccacttacggctcttcgactggcccagtttatgtttctgactctgtgaccctggt---taatgtagcg +accggcgcgcaggccgttgctcggtcgctcgattggaccaaggtcacacttgatggtcgccccctttccacc +at-----ccagcagtactcgaagactttctttgttc-tgccgctccgcggtaagctctctttctgggaggca +ggtacaactaag--gccgggtacccctacaattataacaccactgctagtgaccaattgcttgttgagaatg +ccgccgggcac------cgggttgctat-ttctacttacaccactagcctagg--------------tgccg +gccccgtttccatttc-tgcggttgctgttttagccccccactctgcactagcactgcttgaggacaccttg +gact---------accctgcccgtg----cccatacttttgatgacttttgcccagagtgccgccctc---t +cggcctccagggctgcgctttccagtc--------cactgtcgctgagcttcagcgcct------------- +--------taagatgaaggtgggtaaaactcgggagttatagttta-ttt------gctt----------gt +gcccccct--------tc------actctg------tt-----------------gcttatt-t-------c +tcatttct----gcg----------------ttccgcgctccctg---------------------aaaaaa +aaaaaaa---------------aa------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>JQ953664.1/17238/1-7238 |Hepatitis E virus strain FRSHEV3clike, complete genome +---------------------------ggcagacca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caagctgctctggc +tgcggctaactccgccttggcgaatgctgtggtggttcggccgtttttgtcccgtgtgcagaccgagattct +tatcaacttgatgcaaccccggcaactggttttccgtcctgaagtgctttggaatcaccccatccaacgtgt +tattcacaatgaactggagcagta---ctgccgggccc-gggccggccgttgtttagaggtcggggcccatc +caaggtcaattaatgataaccctaatgttctgcaccggtgctttttgcgaccggttgggagggatgtccagc +gctggtactctgcccccacccgcggccctgcagctaactgccgccgatcagcgttacgtggtctcccccctg +ctgaccgcacctactgttttgacgggttctcccgctgcgccttcgctgcggagactggtgtggccctttatt +ctctgcacgatctttggccagccgatgttgcagaggccatggcccgacatgggatgacacgcttgtatgccg +cgctacacctc-ccccccgaggtactattaccacctggcacttatcataccacctcgtatcttttgatccac +gacggtaatcgtgctgttgtgacttacgagggtgatactagcgcgggctacaaccatgatgtttccatactc +cgtgcatggatccgcacgactaagattgttggtgaccatccgttggtgatagagcgcgtgcgggccattggc +tgtcactttgtgctgctgctcactgcagctcctgagccgtcgcccatgccgtatgtcccataccctcggtca +acagaggtgtatgttcgttccatattcggccctggc---------ggatctccgtctttgttcccatcagcc +t----------gctctaccaaatcta-cattccacgctgtcccggtccacatttgggaccggctcatgctct +ttggcgctaccctggacgatcaggcattctgctgttcgcggcttatgacctatctccgtggtattagctaca +aggttaccgttggcgctctcgttgccaatgagggctggaatgcctcggaggacgcccttaccgctgtcatca +ctgcagcgtacttgaccatctgtcaccagcgttacctccgcacccaagcgatatctaagggcatgcgccggc +tagaggttgagcatgcccagaaattcatcacaagactttacagctggctatttgagaagtc---------ag +gccgtgattacatccccggccgccaactccagttttatgcgcagtgccgccgctggctatcagcaggtttcc +atcttgaccccagggtgcttgtctttgatgagtcagtgccctgc---cgttgcaggacgttccttaagaa-- +----agtagcaggcaaattctgctgcttcatgaagtggctggggcagga------gtgtacctgctttctgg +----------------aaccagcggatggcctggtcggtgaccaaggc--------cacgacaatgaagcct +atgagggctcggaggtcgaccaagctgagcccgcccatcttgatgtctcggggacctatgccgtttacggac +gtcagcttgaggctctgtatagggcacttaatattccacaggatattgccgctcgggcgtcccgtctaacag +ctactgtcgagcttgttgcaagcccagaccgcttagagtgccgtaccatactaggaaataaggtctttagaa +caacggtggttgacggtgcccatcttgaggtgaatggccc------------------------cgagcagt +atgtcctttcatttgatgcctcccaccagtctatgggggctgggccgcatagccttacttacgagctgaccc +ccgccggcctgctggtgaagatctcgtcc-------aacggcttggactgcaccgcgacgttttcc---ccg +ggcggcgcccctagtgccgcaccgggcgaggtggcggccttctgcagcgccctttataggtataatcggttt +acccagcggcactcgctggcaggtggtttatggttgcatcctgaggggctgttgggtattttcccccctttt +tcccctgggcacctttgggagtctgccaatcccttctgcggggagggaactttgtacacccgaacttggtct +acatcaggtttttctagtgacttttccccgcccgaggctgctgcccctctgccggtcactgcctt----cgg +gccgcccc---acctcacaccccctgctagtgatat-----------------ttgggtgtt---------- +---------accgtcaccc----tctgaggagt--------------ctcaggttactgtagtgcctgaccc +tcctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tacccgaacatattcaaccacctagc +cttgtcaagcctaag-------------------------------------accttcgtgcgtaagtcgcc +aacaccacc--------------------------------------gccttcacgcacccgccgcc----- +-------------------tcctttatacctacccagacggcgctaaggtgtatgcagggtcattgtttgag +tcggattgcgattggctggttaatgcatcaaaccctggccatcgccccgggggtgggctttgccacgccttt +taccaacgctaccctgaatcgt------tctacccgactgaatttgtcatgcgcgatgg---tctcgctgcg +tacaccctaaccccacgccctattattcatgcagtggctcctgattacagggttgagcagaacccaaagagg +cttgaggcggcgtatcgggagacctgctctcgccgcggcaccgctgcttacccactcctgggctctggtata +taccaggtcccagttggtcttagctttgatgcctgggaacgtaatcaccgccctggggatgagctctactta +accgaccccgctgttgcc-------------------------------------------------tggtt +cgaggccaacaagccaacgca--------------------------------------------------- +------------------------------------------gccggctcttacgataactgaagacacagc +cc------------gtacggccaatttggcactggagatcg------------acgccgccaccgaggtcgg +tcgcgcctgt---gccggctgcacagtcagtcccggggttgtacattaccagttcactgctggcgtccctgg +ctcggggaagtcacgatccatacagcagggggatgtggatgtggtggtagtccctacccgggagctccgtaa +ttgctggcgccgccgaggttttgcggcttttactccccacacggcggcccgtgtcacctcgggccgccgtgt +tgtcattgatgaagccccctccctcccgccacatctgctgttgttacatatgcagcgggcttcatcggtcca +ccttcttggtgatccaaatcagatccctgccatagattttgagcatgccggcctggtccccgcaatacgccc +cgagcttgcgcccactagttggtggcatgtcacacatcgctgccctgctgatgtgtgtgaactcatacgcgg +agcttacccaaagatccaaaccacgagccgtgtgttgcggtccctattttggaatgag------cctgccac +cggccaaaaattggtttttacgcaggccgctaaagctgctaaccctggtgcaatcacagttcacgaggctca +gggcgccacctttacggagactaccattatagctacggctgatgccaggggccttatacaatcgtccagggc +tcacgctatagtagcactcacccgtcacacagagaagtgtgtcatactggatgcccccggtttgctgcgtga +agttggtatatctgacataattgttaataacttc------------------------------ttccttgc +tggcg--gtgaggtgggccaccaccgcccttctgtaatacctcgtggtaaccccgaccagaatcttgcaac- +-----gttgcaagcgttcccgccctcctgccaaattagtgcctatcatcagctggccgaggaactgggccac +cgaccagcccctgtcgccgctgtcctgcctccctgccctgagcttgagcagggcctgctgtacatgccgcag +gagcttacggtgtctgatagtgtgttggtcttcgaactcacggacatagtccactgccgcatggccgctcct +agccagcggaaggccgtcctatcgacgcttgtggggaggtacggccgtaggacgaagctgtatgaggccgct +cattctgatgttcgcgagtctttagccaggttcattcccaccatcgggcccgtccaggccaccacatgcgag +ttgtacgagctggtcgaggctatggtcgagaagggtcaggatggttctgccgtcctggagctcgatctctgc +aatcgcgatgtttcgcgtatcacattctttcaaaaagactgcaataagtttaccaccggtgagaccattgcc +cacggtaaagtcggccagggcatttcagcttggagcaagaccttctgtgccctattcggcccgtggttccgc +gctattgagaaagagatactagctttgctcccgcccaacatcttttacggcgacgcctttgaggagtctgtg +ttcgccgccgctgtgtccggagcgggatcatgtatg---gtctttgagaatgacttttcagagtttgatagt +actcagaataacttctctct------------------tggccttgagtgtgtaatcatggaggagtgtggc +atgccccagtggctagtccggctatatcacctggttcgatcggcctgggttctacaggcgccgaaggagtcc +cttaaaggcttttggaagaagcactctggtgagcccggcacccttctctggaataccgtttggaatatggcg +attatagcacattgctacgaatttcgcgacttcagggttgccgctttcaagggtgatgattcagtggtcctt +tgtagtgattatcgccagagccgcaatgcggcagctttgattgctggctgtgggcttaaactgaaggttgat +taccgccctatcgggttgtatgccggtgtggtggtggcccccggcctggggacgctacctgatgtggtgcgt +ttcgctggccggctatctgagaagaactggggcccaggcccggaacgggccgagcagttgcgccttgcagtc +tgtgatttccttcgtgggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------tcta +tggtgttagccctgggttggtacataacctcatcggcatgctgcagaccattgctgacggcaaggcccattt +tacagagactgttaaacctgtgcttgatcttacgaattccatcatacagcgggtggaatgaataacatgtc- +a----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgactggcc------------gccgtcgcgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcatttcacaacccggggctggagctcgctctc +gacagccgccccg---------------ccccctcggttccacttggcgtgaccagtccca----------- +------gcgcccccccgccaccccccgccgtcgatctgcccca---------gctggggctgcgccgctgac +cgctgtttcaccggctcccgacacggcccccgtgcctgatgtcgattctcgcggtgccattctgcggcggca +gtacaacttatctacatccccactgacttcatctgttgcttcgggcactaatttggttctttatgctgctcc +gttaaatcctctcctgcccctccaggatggcaccaacacacatattatggccactgaggcatccaactatgc +tcagtaccgggtcgtccgagccacgatccgctaccgcccgctggtgccaaacgccgtgggtggctatgcaat +ttctatttcattctggcctcagactaccaccacccctacatctgtggatatgaattccatcacttccactga +tgttaggatcctggtccaacctgggatagcctccgaattagtcatccctagcgagcgcctccattatcgtaa +ccagggttggcgctctgttgaaacatcaggtgtggccgaagaggaggctacttccggtttggtgatgctctg +cattcatggctcccctgttaattcttatactaacaccccttatactggggcgctggggctccttgactttgc +attagaacttgagtttaggaacctgacacccgggaataccaacacccgtgtgtcccgttatacgagcacagc +ccgccaccggctgcgccgcggtgctgatggtactgctgaacttaccactacagctgccacgcgtttcatgaa +ggacttacacttca---ccggtacaaac---ggggttggtgaggtgggccgcggtatcgctctcacactttt +taatcttgctgatacgcttctcggtggtttgccgacagaattaatttcgtcggctgggggccaattgtttta +ctcccgccccgtcgtctcagccaatggcgagccggccgttaagttatatacatctgttgagaatgcgcagca +agataaaggaattgccatcccacatgatatagacctgggcgactctcgtgtggttattcaggattatgataa +tcaacatgagcaggatcggcccaccccttcacccgccccgtctcgtcctttctcagtccttcgtgcaaatga +tgttttatggctttc-----------------------------tcttactgccgctgagtatgac------ +cagactacgtatgggtcttccaccaacccaatgtatgtctcagatactgttacacttgt---taatgtggcc +acaggggctcaggctgttgctcgttctcttgattggtctaaggtcactctggacggccgccctctcaccacc +at-----ccagcagtactctaaaacattctacgttc-tcccgctccgtggaaagttatccttttgggaagct +ggcacgaccaag--gctggctacccttataattataatacaactgctagtgatcaaattttaattgaaaatg +cagctgggcat------cgtgttgctat-ctctacttatactactagcctagg--------------tgctg +ggcctgtatcagtctc-tgcggttggcgtgctagcccctcactcggctctcgctatccttgaggacaccata +gact---------acccggcccgcg----ctcatacttttgatgacttttgcccggagtgccgcaccc---t +tggtttgcagggttgtgctttccagtc--------tactattgctgaacttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattaa-tt--------ctt-ctt------gt +gccc-cct--------tc-atag-tttt-----gc-tt--------------------tatt-t-------c +ttatttct----gc----------------tttacgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaa---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>JQ953665.1/17244/1-7244 |Hepatitis E virus strain FRSHEV3e, complete genome +---------------------------ggcagacca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +agcggctaactccgctttggcgaatgctgtggtggtccggccgtttttgtcccgtacccagactgacattct +tatcaatttgatgcaaccccggcaactcgtattccgtcctgaggttttgtggaaccacccgatccagcgagt +catacacaatgagttggagcagta---ctgtcgtgctc-gtgctggtcgttgtctggaggtgggggctcatc +caaggtccattaacgacaaccccaatgttttgcaccggtgtttccttcgtccagttgggagagacgtacagc +gttggtattctgccccgacccgcggcccggcggctaattgtcgccgttccgcgttacgtggcttgccccctg +tcgaccgtacctactgcttcgacgggttttcccgctgcgcctttgccgccgagactgggatcgctttatact +cattacatgacctttggcccgcggatgttgcggaggccatggctcgtcatgggatgacacgcttgtatgcag +ccctacacctg-ccccccgaggttttgctaccacctggcacttatcataccacctcttatttgctgattcac +gacggcaatcgcgctgttataacttatgagggggataccagcgcgggttataaccatgatgtgtccattctc +cgtgcatggattcgcacaaccaaaatagttggtgaccacccgctggtcatagagagggttcgtgctatcggc +tgccattttgtgttacttctcactgcagcccctgagccatctcctatgccctatgttccataccctcgttca +acggaggtgtatgttaggtctatattcggccctggt---------gggtcgccctctctcttcccatcagcc +t----------gctctactaaatcta-catttcacgccgttccagtccatatctgggaccggctcatgcttt +ttggtgccactctggacgatcaggccttctgctgctcgcggcttatgacctatcttcgcgggatcagttata +aggtgaccgttggcgcacttgtcgccaacgaaggctggaacgcctcggaggatgcgcttactgctgtaatca +ctgctgcgtacctgaccatctgccatcagcgctacctccgaactcaggccatatctaaaggcatgcgccggc +tagaagtcgagcacgcccagaaatttatcaccagactttacagttggctgttcgagaagtc---------cg +gccgtgattacatccctggccgtcagctccagttctatgcgcagtgccgccgctggctctctgccggcttcc +acctagaccctagagtccttgttttcgatgaagcggtcccttgc---cgttgcaggagttttctgaagaa-- +----ggtggccggcaaattctgttgcttcatgaagtggctagggcagga------gtgcacttgcttcctgg +----------------agccggctgagggcttgattggtgattgtggc--------catgataatgaggcct +atgagggctcggaggtggaccctgccgagcctgtccaccttgatgtctctgggacctatgcagttcatggcc +gtctgcttgagcctttatacagggcgctcaacatcccacatgatattgcagctcgcgcatcacgcttgacag +ccaccgtggagctcactgctagccctggtcgccttgaatgccgcacagtgcttggaaataagaccttccgca +catcgataactgatggtgcccaccttgaggtcaatggccc------------------------tgagcagt +atgttctgacatttgacgactcccgtcaagtgatgggggctgggcctcatagtcttacatatgagctcaccc +ctgctggcctgcaggtcagaatatcctct-------aatggcctggactgcactgctgtttttccc---cct +ggtggggcaccaagtgccgcaccgggtgaggttgcagccttctgtagcgctttatatagatataacagattt +actcagcgccactcgcttacaggcgggttgtggctgcaccctgaggggctcttaggcctgttcccccctttc +tcccccgggcacatttgggagtctgcaaatccattttgtggtgagggtacactttacacccgaacttggtct +acatctggtttttctagtgatttttctccccccgaggcggcttttaccgccccagcccttgacgg----ggg +tttacccccaggcaccccttcctctgttagtggcgt-----------------ctgggcgct---------- +---------tccgccacca----tctgaggggt--------------cagtggctgctttatcacttgcagc +cccggt------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------------------------tagcaagcctgttagccctcctggc +cccgctacgcctaaa-------------------------------------tcccctgttcgtaagccacc +ctcaccgcc--------------------------------------accggttcgtacccgtcggc----- +-------------------ttctctacacttacccggatggagccaaggtctatgcaggctccctgttcgag +tcagattgtgattggctggtaaacgcgtctaaccctggccaccgccctggcggcggtctttgtcacgccttt +tatcagcgcttcccagagtcgt------tccacccgaccgactttgtcatgcgcgaggg---cctcgccgcg +tacactttgactccacgcccaattattcatgctgtggctcctgattatagggttgagcagaaccctaagagg +ctggaggcggcgtaccgtgaaacctgctcccgccttggtacagccgcttacccactactggggtcagggatt +tatcaagttcctgtgggtttaagttttgacgcctgggagcgtaaccatcgcccaggcgacgaactctatcta +accgagcccgctgccgcg-------------------------------------------------tggtt +tgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagctttaacaatcactgaagatactgc +tc------------gcacggctaacctcgcgctcgagatcg------------actctgctaccgaggtggg +tcgtgcctgt---actggctgtactgttagtcctgggattgtccattatcaatttactgccggggtgcctgg +ttccgggaagtctaggtctatacaacaaggggacgtcgatgttgtggttgtgccaacacgcgagctccgtaa +tagctggcgccgccgcggatttgccgcttttacgccccacacggcggcccgtgtcaccgctgggcggcgtgt +tgtgattgatgaagcaccttcgctcccgccacatttgctactgcttcatatgcagagggcgtcgtcggtcca +ccttctcggcgaccccaaccaaatccccgctattgattttgagcacgcgggcttggtgccggcgattcgccc +tgagcttgccccaactagttggtggcatgttacacaccgatgtcctgccgatgtgtgtgagcttatacgtgg +ggcctaccctaagatccaaactaccagtcgcgtgatgcgatctttgttttggaatgag------cctgcggt +aggccagaagttggtcttcacgcaggcagccaaggcagccaaccctggtgcaatcaccgtccatgaggctca +gggcgccacatttacagagactaccatcatagctacggccgatgctaggggccttatccagtcttctcgtgc +gcacgcgattgtcgcgctcactcgtcatacagaaaaatgtgtcattttggatgcccccggcctgctgcgtga +agtcggtatctctgatataattgttaacaatttc------------------------------tttctggc +cggcg--gtgaggtaggccaccaccgcccctccaccatacccagaggtaatccagaccagaacttagatac- +-----cttgcaggcattccctccatcttgtcagattagcgcctatcatcagttagctgaggaactgggccac +cgaccggccccagtggccgctgtattaccgccctgccctgagcttgagcagggtctactttatatgccacaa +gagctcacagtttctgatagtgttctggtctttgagctcacagatatagtccattgccgaatggcggcccct +agccagcggaaggccgtcctttcaacgctcgtcggcaggtacggccgccgaactaagctgtatgaggcggct +cactctgatgtccgtgagtctctaggaaagtttatccctaccatcggaccagtccaggccaccacatgtgag +ttgtatgagttagtggaggctatggttgagaaaggtcaggacggttccgctgtgttggagcttgatctctgc +agccgtgatgtttcacgtatcacattcttccagaaggattgtaataaatttacaacaggcgagactattgcc +catggcaaggtgggccagggcatctcggcctggagcaaaactttctgtgctttatttgggccgtggttccgt +gccattgagaaggagatcttagccctgcttccacctaatatcttttatggtgatgcttttgaagagtcagtg +ttttcagcagccatctccggagcaggttctagtatg---gtctttgagaatgatttctctgagtttgacagc +acccaaaacaacttctccct------------------cggcctcgagtgtgttatcatggaagagtgcggc +atgccccagtggctcatccgactgtaccacttagtcaggtcagcctggactctgcaggccccgaaagagtca +ttgaaaggcttttggaagaagcactctggcgagcctggtacactcctttggaacaccgtctggaatatggcg +atcatagcgcactgctatgaatttcgtgatttgagagtggcagcgtttaaaggggatgactcagtggtcctc +tgtagtgactatcgccagagccgtaatgcggccgccttgattgctggttgcgggttaaaattgaaggttgac +tatcgccccatagggttgtatgctggtgttgtggtggccccgggtctcggagcactccctgacgtcgtccgg +tttgccggccggctgtctgagaagaactggggcccgggccccgagcgtgctgaacagctgcgactagcagtt +tgtgatttcctccgaaggttgacgaatgttgcgcaggtctgtgttgatgttgtgtcccgtg-------ttta +cggggttagtcctggcctggtacataaccttatcggcatgctgcagactatagccgatgggaaggctcactt +tactgagactgtcaaacctgtactggatcttacaaactctatcatacagaggttggaatgaataacatgtt- +g----------------tgtgcatcgcccatggg------------gtcaccatgcgccctcgggctgtttt +gttgttgttcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcagtgc +cggcggtg-gtttctggagtgacagg--attgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaacccggggctggagctcgccctc +gacagccgccccg---------------cccccttggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgccgtcgatctacccca---------actggggctgcgccgttaac +tgctgtttcccctgcgcctgatacggccccagttcctgatgttgattctcgcggtgccattctgcgccgcca +atataatttgtctacatcccctttgacttcttctgtagcttctggtaccaatcttgtcctttatgctgcccc +gctcaatcctctcctacctcttcaggacggcaccaatacccacatcatggcgactgaggcgtctaattacgc +ccagtaccgagtcgttagggctacaatccgctaccgccctttggtgccaaatgctgttggtggctatgcgat +ttctatttctttttggcctcagactacaactacccccacctctgttgatatgaattccatcacttctactga +tgttcggattttagttcaacccggtatagcctctgagttggtcatcccgagtgagcgcctccattatcgtaa +tcagggttggcgctctgttgaaacctcgggtgtggccgaggaggaggcgacatcgggcttggttatgctttg +catacacggttcccccgttaactcttacaccaacacaccctataccggggcgctggggcttctcgattttgc +acttgagcttgaattcaggaatttgacccctgggaacactaacacccgtgtgtcccggtataccagcacggc +ccgccaccgcttgcgccgtggcgccgacggaactgcagagctcacgactactgccgccacgcgctttatgaa +ggacctgcatttct---ctgggacgaat---ggtgttggtgaggtgggccgcggcatagccctaactttatt +caaccttgctgatacacttctcggtggtttgccgacagaattgatttcgtcggctggaggtcagctctttta +ctcccgcccagttgtctcagccaatggcgagccgactgtcaaattatacacttctgtcgagaatgcacagca +ggacaagggcatcgccattccacatgatatagatctaggagactcgcgtgtggttatccaggactatgataa +tcagcatgaacaggataggcctaccccttcacctgccccgtctcgccccttctcggtccttcgtgctaatga +tgtcttgtggctttc-----------------------------cctcactgctgctgagtatgat------ +cagaccacttatggttcgtcgaccaaccctatgtatgtctcagacactgttacctttgt---caatgtggct +acgggagctcaggctgtttctcgctcccttgactggtctaaggttaccttggatggtcgacctctcactact +at-----ccagcagtactctaagacattctatgtgc-ttccacttcgtgggaagctttccttttgggaggcc +ggcactaccaag--gccgggtatccctataactataacaccactgctagtgatcagatcttgatagagaatg +cagccggacac------cgtgttgctat-ctctacctacactactagcctcgg--------------tgctg +gtccagtgtctgtctc-tgcggttggtgttcttgccccgcattctgctttagctgtgcttgaagataccatt +gatt---------atcccgctcgcg----ctcatacttttgatgatttttgccctgagtgccgtaatc---t +tggcctacagggttgtgcttttcaatc--------tactattgctgaacttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattaa-ttt---ca-tcct----------gt +accc-cct--------tc-tagg-ct-tt----gc-ta-ta------------------ttt-t-------c +ttttttct----gcg----------------tttcgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaaa--------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>JQ953666.1/17249/1-7249 |Hepatitis E virus strain FRSHEV3f, complete genome +----------------------ggcag----accac-g-tatg-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +cgcggccaattccgccttggcgaatgctgtggtggttaggccgtttttatcccgtcttcaaactgatatcct +tattaacttgatgcaaccccggcagcttgtgttccgacctgaagtcctctggaaccatccgattcagcgagt +tatacacaatgagctggagcaata---ctgccgagccc-gcgctggccgttgtcttgaggtgggtgcccacc +caagatccatcaatgacaacccaaatgtcctgcaccggtgcttcctccgcccggttggaagagacgtccagc +gttggtactcggcccccactcgtggtccagcggctaactgccgccgttctgcgctacgtggtttgccccctg +tcgaccgcacatattgcttcgacgggttcgcccgctgcgcctttgccgctgagaccggtatcgctttatatt +cattgcatgatctttggccctcggacgttgcggaggctatggcccgccacgggatgacgcgcctgtatgctg +cccttcaccta-ccccctgaggtcttgttaccacctggcacttaccacacaacctcctatcttttaattcat +gacggcaatcgtgccgtcgtgacttatgagggggataccagtgcgggctataaccacgatgtgtctatactt +cgtgcatggatccgcaccactaagatagttggtgatcacccactggtaatagagagggtccgcgccatcggc +tgccattttgtcctacttcttactgcagcccctgagccatccccaatgccttatgtcccgtaccctcgctca +acagaggtgtatgttagatctatatttggccctggt---------gggtcgccttctcttttcccatcagcc +t----------gctccaccaaatcca-cattccatgctgtcccggtccatatttgggaccggcttatgcttt +ttggtgccaccttggacgaccaggctttctgctgctcgcggcttatgacctatctccgcgggattagctata +aagtaaccgttggcgcacttgtcgccaacgagggctggaatgcttcggaggatgcacttaccgccgtgatca +ccgcagcgtacctgactatttgccatcagcgctacctacgaacacaggccatttccaaaggtatgcgtcggc +tagaggttgagcatgcccaaaagttcatcacaaggttgtatagctggctgtttgaaaagtc---------ag +gccgtgactacatccccggtcgccagcttcagttttatgcacagtgccgccgttggctctcagctggcttcc +atttggaccccagagttcttgtctttgacgaggcggtcccctgc---cgctgccggagcttcttaaagaa-- +----ggttgccgggaaattttgttgtttcatgaagtggttggggcagga------gtgcacttgctttctgg +----------------agccagcggaaggcctgttcggtgactgtggt--------catgataatgaggcct +atgaagggtctgaggtggaccccgctgagcctgctcatcttgatgtttctgggacctatgcggtccatggcc +gccagcttgaggctctatatagagcgcttaatatcccagatgacattgtggctcgtgcatcacgcctgacgg +ctactgtggaacttgccgccagtccgggccgacttgagtgccgtacggtgcttgggaataagaccttccgta +catcgataaccgatggtgcccacctcgaagccaacggtcc------------------------tgagcagt +atgttttgacatttgatgactctcgccaggcaatgggggctgggcctcacaatcttacgtatgaacttgtcc +ctgccggtctgcaggtcaaaatatcttct-------aatggcttggactgtaccgctgtattcccc---cct +ggcggggcaccaagcgctgcaccaggtgaagtggcggctttttgcagcgccctatataggtataataggttc +acacagcgccattcgctgaccggtgggttgtggctgcaccctgaggggctcctgggcctgttcccccctttc +tccccggggcatctttgggagtctgcaaatcccttctgtggtgagagcacactttatacacggacttggtct +acatctggtttctccagtgatttctccccgccagaggcggcttatgttgccccggcccctgacgt----agg +gctaccctcgggtgccccctcgtctgctagtgatgt-----------------ttgggtgtt---------- +---------tccaccaccc----tccgaggggt--------------cggcgatcgtcccgccgcccgagac +cctgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttagtaagccagctaatccgcctagc +cttactacacctaga-------------------------------------ccccccgcccgtaagccacc +tacgccacc--------------------------------------accgactcgctcccgcaggc----- +-------------------tcctttacacatatcctgacggggccaaggtgtatgcaggctctctgtttgag +tcagattgtgattggctggtcaatgcatctaaccctggccaccgccctggcggtggtctttgccatgcattt +taccagcgtttcccggagtcgt------tccaccagactgattttgttatgcgtgaggg---cctcgctgca +tacactctgagcccgcgtccgatcattcatgctgtggcccccgactatagggttgagcagaaccccaagagg +ttagaggcggcataccgtgagacttgttcccgcctcggtacagctgcctaccctctactggggtcggggatt +taccaggtgcctgtaggcttaagtttcgacgcctgggagcgtaatcatcgcccaggcgatgaactttacctt +actgagccagctgccgcc-------------------------------------------------tggtt +tgaggctaataagccgactca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacaccgc +tc------------gtacagccaaccttgcgcttgagattg------------actccgccactgaggtggg +tcgtgcctgc---gccggctgtactgttagtcccgggattgtccattaccagtttactgccggggtccctgg +ctccgggaagtctaggtctatacagcacggggatgttgatgttgtggttgtgccaactcgtgagcttcgtaa +cagttggcgacgccgcggctttgctgcctttacaccccatacagcagctcgtgttactgccggtcggcgcgt +ggtgatagatgaggcaccctcgctcccgccgcacttgctgctgcttcacatgcagcgagcctcatcggtcca +tcttcttggcgaccccaaccagatccctgctattgactttgagcatgccggtttggtcccagcgatccgccc +tgagctcgcccccactagttggtggcacgtcacccatcgttgccccgccgatgtgtgcgagcttatacgcgg +ggcttacccaaagatccagacgaccagccgtgtgttgcgatctttattttggaatgag------cctgcggt +gggtcagaggctggttttcacgcaggcagccaaggcggccaaccccggtgcaattaccgttcatgaggccca +gggcgccacgttcacggagactaccatcatagccacggccgatgctagaggtcttattcaatcttcccgtgc +gcatgccatcgttgcacttactcgccatacagaaaaatgcgtcattcttgacgcccctggcctactgcgtga +ggtcggcatttctgacataattgttaataacttc------------------------------ttcttggc +tggtg--gtgaagtgggtcaccatcgcccttccaccataccccgcggcaacccagaccagaacttagacac- +-----cttacaggcattccctccgtcctgtcagattagtgcctaccaccagctggctgaggagctgggccat +cggccggccccagtggctgccgtcttgcccccctgccctgagcttgagcaggggctactctacatgccgcaa +gagcttacggtgtccgatagtgtccttacttttgaactcacggacatagtgcattgccgtatggctgccccc +agtcagcgcaaggcagtcctttcgacgctcgtcggtaggtacggccgccgaactaagctgtatgaagcggcc +cattctgatgttcgtgagtctttagggaggttcatccccaccatcggaccggtccgggccaccacgtgcgaa +ctatacgagctggttgaggctatggtcgagaagggccaggacggctctgccgtgctcgagcttgacctctgc +agccgtgatgtctcgcgtattacatttttccagaaggattgtaataaatttacaacaggtgagaccattgcc +catggcaaggtgggccagggcatttcggcttggagtaagaccttctgtgctttattcggcccgtggttccgt +gccattgaaaaggagattctggctctactcccacccaacattttctatggcgatgcctatgaggagtcagtg +ttctctgcagccatttctggggccggctccagtatg---gttttcgagaacgatttttctgagtttgatagc +acccaaaacaacttttctct------------------tggccttgagtgcgttattatggaggagtgtggc +atgcctcagtggcttattcggttgtatcatttagttaggtcagcttggaccttgcaagccccgaaagagtct +ttgaaaggtttttggaagaagcattccggcgagcctggtaccctcctttggaacaccgtctggaacatggcg +atcatagcacactgctatgaattccgtgacttgagagtggcagcgtttaagggggatgattcagtggttctt +tgcagtgattaccgtcagagccgcaatgcggccaccctgatagccggttgcgggttgaaattgaaggttgat +taccgacctataggtttgtatgccggcgttgtggtggctccgggcctcggtgcacttcctgatgttgtccgg +tttgccggtcgactatctgagaagaactggggtccgggtcccgagcgcgccgaacagttgcgcctagcagtt +tgtgatttccttcgagggttgacgaacgttgcgcaggtttgtgttgatgtcgtgtcccgcg-------tcta +tggggttagccccgggctggtgcataaccttattggtatgttacagactatcgctgatggaaaggcccactt +taccgagactgtcaaacctgtgctggatcttacaaattctattatacagaggttggaatgaataacatgtt- +c----------------tctgcatcgcccatggg------------atcgccatgcgctctcgggctgttct +gttgttgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaacccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccctccgtcgtcgacctacccca---------actggggctgcgccgctaac +tgctgtctcaccagcacctgatacggctccagtccctgacgttgattctcgtggtgccattttgcgccgcca +gtataatttgtccacctcccctttaacttcatctgttgcttctgggactaatcttgttttgtatgccgcccc +gcttaatccccttctgcctttgcaagatggtactaatactcacatcatggcgactgaggcgtctaattatgc +tcagtatcgggtagtccgggctacaattcgctatcgccctttggtgccgaatgctgtcggtggttatgcaat +ttctatttccttctggcctcagaccacaactacacccacctctgttgatatgaattccatcacttctaccga +tgttaggattttagttcagcctggtatagcctctgagctggtcatcccgagtgagcgccttcattatcgcaa +tcagggttggcgttctgttgagacatcgggtgtggcagaggaggaggcaacatcaggcttggtcatgctctg +tattcatggttcccccgttaattcttacaccaatacaccttatactggggcgttggggctccttgactttgc +acttgagcttgaattcaggaatttgacccctgggaacactaacacccgtgtgtcccgttacactagcacagc +ccgacaccgtttgcgccgtggtgctgatgggacagccgagcttacaaccaccgcagctacacgttttatgaa +ggacttgcatttca---ccgggacaaac---ggtgtcggcgaagttggccgtggtatagccttaacgttgtt +taatcttgctgatacacttctcggcgggctgccgacagaattgatttcgtcggctggaggtcaattgttcta +ctcccgcccggttgtctcagccaatggcgagccaactattaagttatacacctcagtcgagaatgcacagca +ggataaaggcattgccataccacacgatatagatttaggggactcccgtgtggttatacaagattatgacaa +ccaacatgaacaggatcggcctaccccgtcgccggccccgtcccgtcccttttcagtccttcgagccaatga +cgtcctgtggctctc-----------------------------tctgactgcggctgaatatgat------ +cagactatttacggctcgtcgaccaaccccatgtatgtttcggacactgtcacatttgt---taatgtggcg +acaggtgcccaggctgtcgcccgctcccttgactggtctaaggtcaccttagatggccggcctctcaccacc +at-----tcagcagtactctaagacattttatgtgc-tgccgcttcgcggcaagctttccttttgggaagct +ggtacaactaag--gctggttacccttataattataatactactgctagtgaccagattttgattgagaatg +cagccggccat------cgtgttgccat-atctacctacactactagtcttgg--------------tgccg +gccctgtgtctgtctc-tgcggtcggtgttcttgccccgcattctgctctagctgtgcttgaagacaccatt +gact---------atcctgctcgtg----cccatacttttgatgatttctgccctgagtgccgcaatc---t +cggcctacagggctgtgcttttcagtc--------tacaattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggcaagacccgggagtcttaattaa-tt----cc-ccc--tt-------gt +gccc-cct--------tc-taag-ct-tt----gc-tc-tgt----------------tattct-------t +ttttttct----gcg----------------tttcgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaaaaa------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>JX121233.1/17296/1-7296 |Hepatitis E virus isolate CHNBJR14, complete genome +----------------------------gcagacca-cgtaag-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcatcacaaccgccatcgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggttattcggccgtttttgtcccggacacagactgaaattct +cattaaccttatgcaacctcggcagctggttttccgcccggaggttttctggaaccaccctattcagcgtgt +aatacacaatgagctagagcagta---ctgtcgtgccc-gtgccgggcgctgtcttgaagtcggggcccacc +caagatctattaatgataacccaaatgttcttcaccggtgcttcctcaggcccgttgggagagacgttcagc +ggtggtactctgcccccactcgcggccctgctgctaactgccgccgttccgcgctgcgcggtcttccacccg +ccgatcgtacttattgctttgatgggttctccggctgcacttttgcggctgaaaccggtattgctctctact +ctttacatgacttgtggcccgctgacgttgcggaggcaatggcgcaccatgggctggcacgcctgtatgctg +tgttgcatctc-ccgcctgaggtcttactgccgccaggcacctaccacaccaccacctaccttctcattcac +gacggcgctcgtgctgttgtgacttatgaaggtgatacaagtgctggttacaaccatgatgtttccattctt +cgcgcctggattcgtacgactaaagtcaccggcgaccatccgctcgtgatagagcgtgttcgcgctattggc +tgccatttcgtgttactgcttactgcggcccccgaaccgtcacccatgccttatgtcccattcccccgttcg +acagaggtgtttgttcgctcgatattcggcccgggc---------ggctcgccctctctttttccatcagct +t----------gctccacaaaatcta-cttttcatgccgtccctgttcatatttgggataggcttatgctct +ttggcgctacgctggatgaccaggccttttgttgctcgcggcttatgacctaccttcgcggtattagctaca +aagtcactgtcggtgctcttgtcgccaatgagggttggaatgcttctgaggatgctctcactgcagtgatta +ccgcggcgtaccttaccatctgccaccagcgctacctccgcacccaggcgatttctaaaggtatgcgtcgac +tggagcttgagcacgcccagaagtttatcaccaggctttatagctggctgtttgaaaagtc---------tg +gccgtgattatatccccggccgtcagcttgaattctacgcgcagtgccgacgctggctttctgccggatttc +atttggaccctagagtgcttgtttttgatgagtctgtgcactgc---cgctgtaggagctttgtaaagaa-- +----tgtggctagaaaagtttgctgctttatgaagtggcttggtcagga------gtgcacttgtttcttgg +----------------agcctgcggagggtctgatcggtgaccagggc--------catgataacgaggctt +atgaggggtctgaggtcgaccctgctgagcccgccccgtctgatgtatcggggacctatgttgtccacgggc +aactgttggtagatttatatagggcgctcaacgttccgcatgatattgctgcccgagccgcacgtctgtcgg +ccactgttgagctcactgccggcccagggcggcttgagtgtcgcactattttgggtaacaagaccttccgca +ccacgattaccgacggcgcccaattggaggcgaatggccc------------------------tgagcagt +atgtcctttcatttgatgaagccggccagtgcatgggtgccggcccgcatagcctcgtgtatgagctcacct +ccagcgggcctcaggttaagatttcatct-------aatggtttagactgtgtggcagtcttcccc---tcc +gggagggccccgagtgtcggggccgcagaggttacggccttctgtagcgccctttatagatataatagaacc +atccagcgacactcgattgttggtgggctgtggttacacccagaggggctgctaggtcttttcccacctttt +tccccaggtcatttctgggagtctaataacccgttttgtggtgaggggactctttacaccagaacttggtcc +atgtctggcttctctagtgatttttcgccacctgaggcgactgccggcgcccccccccccgctagc------ +-ctgccctgcacaccggctccctccgagattgccgt-----------------tcgaaccct---------- +---------gccgccccct---------------------------------------------cccgtgga +ctcac------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------------gggttattgatccacctg-- +-ctgctacgtctgtg-------------------------------------ccctttgcccataagccacc +ggagcggtc--------------------------------------ttcggctcgtaaccgccgcc----- +-------------------ttctttacacctacccagatggtgctaaagtttattcagggtccttgtttgag +tctgattgtgactggctggttaacgcgtctaatcccgggcaccgcccgggcggtggcctatgtcatgccttc +taccagcgtttcccccagtctt------ttgaccataccaagtttattatgcgggacgg---gttggctgct +tacaccctattacctcgcccgatcattcatgcagttgcccctgactatagagttgcccataacccgaaaagg +ttggaggcggcgtaccgtgagacctgctcccgcctcggtactgccgcttacccactgctgggctcgggtata +tatcaggtccctgttgacccgagctttgatgcctgggagcgaaaccatcggcccggggatgaactttacctc +acagagccagccaccgct-------------------------------------------------tggtt +tgaggccaataagcctgcccggccacccatacctatagtccttgacacgcccccgcctgaccaccctccaac +cggggccggttctccaccagaggctgataccggcccagcactgccagctctgactataacggaagacgcagc +tc------------gaacggctaaccttgccttagagatcg------------actccaggactgagcttgg +ccgtgcctgc---gccggttgcgctgttagccctggggttgtccggtatcaattcaccgctggtgttcccgg +gtccggtaaatcgaggtccatacagcagggtgatgttgatgtggtggttgtgcccacccgcgagcttcgcaa +tagttggcgtcgccgcgggtttgctgcatttacgccccactcggccgctcgcgttaccagtggccggcgtgt +tgtaatcgatgaagcgccatccctcccgccccacctgctcttactgcatatgcagcgtgcttcatcggtgca +tcttctcggcgacccgaaccagatccccgcaattgatttcgagcatgcaggtcttgttcctgcaatacgccc +tgagctggcccccaccagctggtggcatgtcacgcaccggtgccctgcggatgtctgtgagcttatacgagg +ggcgtaccctaagattcagaccactagtcgtgtgctaaggtccctgttctggggagac------ccccccgt +tggtcagaagttggttttcacgcaagctgcaaaggcagccaaccctggtgcaattacagttcacgaggccca +gggcgccactttcacagagaccaccattatcgcgacggcagatgcgagaggcctcatccagtcatcccgggc +gcatgcaattgtcgcgttaacccggcacacagagaagtgtgtcattctagacgccccggggcttcttcgcga +ggtgggcatatcagatgtgatagtcaataacttc------------------------------tttttggc +cggag--gtgagattggccaccaccgcccctcggttatacctcgcggtaatcctgatcgaaacctcgacat- +-----ccttcaggctttccccccttcatgccagattagtgcttaccaccagctggctgaggagctaggtcac +cggcccgcgcctgtggccgccgttttgccgccttgccccgagcttgagcagggcctgctgtacatgccgcag +gagctcacagtatctgacagtgtattagtttttgagttgactgatatagtccactgccgtatggctgcaccc +agccagcggaaagccgttctttcgaccctcgtcgggcggtatgggcgtcgaacaagattatatgaggctgct +cacgctgatgtccgtgagtcactctcgaggtttattcccgccatcggccctgtgcaagcaacaacttgcgag +ctctatgagctggttgaggcgatggtagagaaaggtcaggacgggtcagctgtcctcgagcttgatctttgc +agccgtgatgtgtctcgaataaccttctttcagaaagactgtaacaagttcacaactggggagacgattgcc +cacggcaaggtaggtcaggggatatcagcctggagcaaaaccttttgtgccctatttggcccttggttccgg +gccattgagaaacagatattaaccttgctcccgcctaacatcttctatggtgatgcctatgaggactctgtg +ttctctgcggctgtcaccggtgccgggtctagcatg---gtattcgagaacgacttttccgagtttgatagt +acccagaataatttctcact------------------tggcctcgagtgtgtgatcatggaggaatgtggc +atgccccagtggctagtcagactgtaccatctggtgcggtctgcctggattttacaggccccgaaggagtcc +ttaaaaggcttttggaagaagcattccggcgagcccggcacactactttggaacaccgtttggaatatggcg +gtcatagctcattgttatgagttccgcgatttcaaggttgctgcatttaaaggggacgattcagtcgtcctt +tgtagtgactatcgtcagagccgctttgcagcggccctgattgcaggctgcgggctcaagctcaaagttgac +taccgtcccgtcgggctctatgccggagtcgtggttgcccctggtcttgggacgttgcccgatgtcgtccgg +ttcgctggtcgtctgtcggaaaagaactggggccccggccccgaacgtgcggagcagttacgtttggctgtt +tgtgacttcctgagaaagctaacgaatgttgctcaggtgtgtgttgatgttgtgtctcgtg-------ttta +tggggtgagtcctgggcttgtacataatcttattggtatgctacagacaattgctgacggtaaggcccacta +cactgagactgtcaagcctgtgttagacctcacaaattccattgtgcagaggttagaatgaataacatgtt- +tc----t---------ctttgcatcgcccatggg------------ttcaccatgcgccctggggctatttt +gctgctgttcgtcgtgtgtttgcctatgttgcccgcgc---------------------------------- +-caccgg------ccggtcagccggctagcc------------gccgtcgtgggcg-gcgcggcagcggtcc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctattttcat---- +--------------ccaaccaaccccttcgccgctgacgttcactcacattccgggtctggagcccgacccc +ggcaaccagcccg---------------cccccttggcacctcttggcgtgacctgtccca----------- +------gcgcccccccgctgcctcgcgccgtcgatctacccca---------gctggggctgcgccgttgac +cgctgtttcacctgcacctgatacggcgcctgtcccagatgttgattcacgcggggctatcctgcgccgtca +gtataatctctctacttcacctttaacttcgactgttgcctcaggcactaaccttgttctatatgctgcacc +gcttaaccccctcctgcctcttcaggatggcaccaacacacacatcatggcgactgaggcgtctaattatgc +tcagtaccgggttgttcgagcgacaatccgttatcgccctttggtgcccaatgcagtcggtggctatgcaat +ttctatctctttctggccccagaccactacaacccctacctccgttgatatgaattccatcacctcaactga +tgtcaggattcttgttcaacctggtctagcttccgaacttgttataccgagtgagcgtctccactatcgtaa +ccaagggtggcgttctgtcgagacctccggtgtggctgaggaggaggccacctccgggcttgttatgctctg +tatccatggctcccctgtaaattcatacaccaacaccccttacacaggtgctttggggcttcttgattttgc +gcttgagattgagttccggaatctgactccggggaacaccaatacacgtgtctcccggtataccagtaccgc +ccgccatcgtttgcgtcgtggcgccgatgggaccgccgaacttacaactacggcggcaacacggtttatgaa +agatcttcatttca---ccgggatgaat---ggggtcggtgagatcggtcgtggcatagccctgacgttgtt +taacttagctgatacacttctcggtggtctgccgacagaattaatttcgtcggccgggggtcaggtattcta +ctcccgccccgtcgtctcagccaatggcgagccgactgttaagttgtacacatcagttgagaacgcacagca +agacaaagggatcgcgatacctcatgacattgatcttggcgattcccgcgttgttattcaggactatgacaa +tcaacacgagcaggaccggcctacaccgtcaccagccccctctcgccctttctccgttctacgtgttaatga +tgtgctgtggctttc-----------------------------gctaactgctgcagagtatgac------ +caaactacatatggctcgtcaactaaccctatgtatgtttcagacactgtcacatttgt---caatgtcgca +acaggtgcccaggctgtcgcccgttctcttgattggtctaaggtcactctggacgggcgaccacttaccacc +at-----acagcagcactctaaaacgttttatgttc-tccccttgcgcggtaagctctccttttgggaggcc +ggtactaccaag--gcaggttacccctataattacaacactaccgccagcgatcagatcttgattgagaatg +cagctgatcac------cgtgttgctgt-ttccacctacactacgagtttggg--------------cgctg +gccctgtgtccatctc-tgcagttggtgtgcttgccccgcattcagttctagctgtccttgaggatactatt +gatt---------accccgctcgtg----ctcacacttttgatgacttttgccccgaatgccgtattc---t +tggcctgcagggctgtgcttttcagtc--------tactgttgctgagcttcaacgcct------------- +--------taagatgaaggtgggtaaaacccgggagtcttaattaa-tt----ct-tgct----------gt +gcct-tcct-------tc-ttcg-ctgac---tgc-tt--------------------tatt-t-------c +ttatttct----gcg----------------ctccgcgctccctg---------------------gaaaaa +aaaaaaa----------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>JQ013791.1/17271/1-7271 |Hepatitis E virus strain W111 nonstructural polyprotein, viral accessory protein, and capsid protein genes, complete cds +---------------------------------------tatg-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcgtcactactgccattgag---caagctgctctggc +tgcggccaattccgccctggcgaatgctgtggtggttcggccgtttctctctcggacccagacagagattct +tattaacttaatgcagccccgccaactggttttccgtcctgaggtgttctggagtcaccccattcaacgtgt +tatacataatgaattagaacagta---ctgccgggccc-gggccgggcgttgccttgaggtcggggcacacc +cgagatccatcaatgataaccccaacgttttacaccgatgctttctccggcctgttgggagggatgtccagc +gttggtactcagccccagcccgtggtcccgcagccaattgccgccgctccgctctacgaggcctcccccctg +tcgaccgtacctattgtttcgacgggttcgctcgttgtgcttttgcagccgagaccggggttgccctctatt +cactacatgacctgtggcccgccgacgttgcagaggcaatggcacaccacgggatgactcggctatatgctg +tcttgcacctc-cctcctgaggtcttactaccaccaggcacctatcacacagcctcttaccttttgattcac +gacggcaaccgtgccgtgatcacatatgagggcgacactagcgccggctacaatcatgatgtttcaaccctc +cgcgcctggatccgcacaacaaagattgtcggtgaccaccctctagttatagagcgggtccgcgctatcggc +tgccattttgtgttgctgcttaccgcagcccccgagccctcccccatgccttatgttccatacccccgttca +actgaggtgtacgtccgctcgatatttggcccgggc---------ggctccccctcccttttcccatcagct +t----------gctcaactaaatcca-cttttcatgccgtcccggttcatatttgggataggctcatgctct +ttggcgctacactggatgaccaggcgttttgttgctcgcggctcatgacttatctccgtggcattagctata +aagttactgttggtacccttgtcgctaacgagggttggaacgcctctgaagacgcccttactgctgtaataa +ccgcagcatacctcaccatctgccaccagcgctatttgcgtacccaggctatttctaagggcatgcggcgcc +tggagcttgaacattcccagaaatttatcaccaggctttacagctggctttttgaaaaatc---------tg +gccgtgactatatccctggccgacagctgcagttttatgcacagtgccgtcgctggctttcagctggctttc +atctggaccctagggtactcgtttttgacgagtctgtgcattgc---cgttgccggggtcttttcaggag-- +----tgtagctaggaaggcctgctgtttcatgaagtggctcggtcaaga------gtgctcctgtttcttgg +----------------agcctgtagaaggtttgcttggtgaccagggt--------catgacaatgaggcct +atgaagggtctgatgtcgaccccgctgaacccgcccccactgatatatcaggaacctatgttgtccacggtc +agcagcttgttgacctgtaccgggcacttaacatccctcgtgaccttgaggcccgcgcggctcgcctgtccg +ctaccgttgagattactgctagtcagggccgtcttgaatgccgcacaattttgggtaacaaaacctttcgca +ccactgtcgccgacggcactcatctggaggcaaacggtcc------------------------tgagcagt +atgtgctctcatttgatgaagcccgccagtgcatgagcgcagggccgcacagccttgcctacgagctaaccc +ctggcggcctacaggttatgatttcatct-------aatggtttggattgcacggccgtatttcct---ccc +gggagggccccgaaaacagaacccgcggaggtcgcggccttctgcgctgccctgtataggtacaacaggacc +atccagcgtcactcaattgtcggtgggttatggctacaccctgaggggctacttggcggctttccgcccttc +tcccctggccacctatgggagtcggcaaacccattctgtggtgagagcacactctatactaaaacctggtct +acgtccggcttctccagtgattttgcgccccctgaagcaggcgctcacacacccccccc---ttcc------ +-cggccctacgaaccggccccccctgagtttgatgt-----------------ccaggcccc---------- +---------gtcaccacca---------------------------------------------tctgttac +ccc--------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +--------------------------------------------------------ttctgaccggtcca-- +-ttgccacacctgtg-------------------------------------ccgtctatccctagggcccc +ggtgcaggc--------------------------------------tgtagtccgtaaccgccgcc----- +-------------------tccttcacacctacccggacggtgccaaagtttattcggggtccttgtttgag +tcagattgcgactggctagttaatgcatccaaccccggtcaccgcccgggcggcggcctttgccatgctttc +taccagcgtttcccccagtcct------ttgatccgaccaagtttgttatgcgtgatgg---gctagctgcg +tacactttgacccctcgccctatcattcacgcggttgcccctgattatagagtcgcgcataaccctaagagg +ttggaagcagcatatcgcgagacctgctcccgccttggcacagctgcctatccgttgctcggctcgggcatt +taccaagtccctgttggcccgagttttgacgcctgggagcggaaccatcgtccgggtgacgagctctactta +accgagcctgccgttgcg-------------------------------------------------tggtt +tgaggccaacaggccagcccgctcccctgtacccgtagcagatgacgtaactcggacggctggccctgtgat +ggggcccagcccttctgtggacgctgctggtgggtcagctctacctgctctggtgatcactgaggatgcagc +cc------------ggacggctaacctcgcactgaagatcg------------actccggaacggaggttgg +ccgtgcatgt---gccggctgcactgttagccctggggttgtttactaccagttcaccgcgggtgtccctgg +gtctggtaagtcgaggtctatacagcagggcgatgttgatgttgtggttgtacccacccgtgagcttcgtaa +tagttggcgccgccgtgggtttgctgcatttacaccccatacggcagcccgtgttactagcggccgacgtgt +tgtgatcgacgaagcgccgtctctcccacctcatttactattactgcatatgcagcgagccttgtcagtcca +cctccttggtgacccgcatcagattcccgcaattgattttgagaacaccggtcttgtgcccgcgatccgccc +cgagttagcgcccactagctggtggcatgttacgcaccgctgccccgcggacgtttgtgagcttatacgtgg +ggcgtatcctaagatccaaactactagtcgtgtgctgaggtccctgttttggggtgac------ccccccat +cggtcagaaattggtttttacacaggccgctaaggcagccaaccctggtgctataactgtccatgaagccca +gggggccacatttacagagactaccattattgcgacggctgatgcgaggggccttattcagtcgtccagagc +gcatgctattgttgcgcttacccggcacacggagaagtgtgttatactagatgcccccggtttgctacgcga +ggttggcatatcagatgcaatagttaacaacttc------------------------------tttctagc +tggcg--gtgaggtcggccaccaccgcccttctgtgatacctcgcggcaaccctgatcagaatcttgaaac- +-----cctccaggcgtttcccccttcttgtcagatcagcgcctaccaccagctagccgaggagctcggccat +cgccccgcgccggtggccgctcttctccccccttgcccagagctcgagcagggtttgttatacatgccacaa +gagcttacggtttctgatagtgttttggtctttgagcttactgatatagtccattgtcgtatggccgccccc +agccagcgcaaagccgtgctttcaacacttgttgggaggtacgggcgccggacgaagctgtatgaagctgct +cattcagatgtccgcgagtcgctcactaggttcatccccaccatcggcccagttcaggccacaacatgcgag +ctttatgagctcgtcgaggccatggtggagaaaggccaggatggctctgctgtattagagctcgacctttgt +aatcgtgatgtgtctcgaataactttcttccagaaagattgtaacaagttcacaactggtgagactatcgcc +catggcaaggttggccagggcatatcggcttggagcaagaccttctgtgccctatttggtccttggttccgg +gccatcgagaaagagatactgactctgctcccacccaatgtcttttatggtgatgcttacgaggactctgta +ttttctgcggctgtaactggggcgggctcgagcatg---gtatttgagaatgatttttcggagtttgacagc +actcagaataatttctcgct------------------cggtcttgagtgtgtgattatggaggagtgtggt +atgccgcagtggctggttaggttgtaccacttggttcgatccgcttggatttggcaagccccgaaggagtct +ttaaaaggtttctggaagaagcactccggcgagcctggcacgctactttggaatactatctggaatatggcg +atcatatcgcattgttatgagttccgtgactttaaagttgctgcattcaaaggagacgattcggtggtcctc +tgtggcgattaccgtcagagccgctttgctgcggccctgattgccggttgcgggctcaagctcaaggtagat +tatcggcctgtcgggctttatgccggagttgtggttgcccccggtcttgggaccttgcccgacgttgtccgg +tttgctggccggctgtcggagaaaaactggggccctggccctgagagggctgagcagctacgcttggccgtc +tgtgattttctgaggaagttgacgaatgtggctcaggtctgtgttgatgttgtctcccgtg-------ctta +tggggtgagccccgggcttgtacataaccttattggcatgctgcaaacaatcgctgatggcaaagctcatta +tacagagagtgtgaagcctgtgctggaccttacaaattctattatacagaggctggaatgaataacatgtc- +t----------------tctgcatcacctatggg------------ttcgccatgcgccttaggtttgttct +gttgttgctcttcgtgtttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcggcggcagtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctattttcat---- +--------------ccaaccaaccccttcgccgccgacgttgacacacattccgggtctggagcccgtgccc +ggcaaccggcccg---------------cccccttggctcctcttggcgtgacctgtccca----------- +------gcgcccccccgctggctcacgccgtcgatctgcccca---------gctggggctgcgccgctgac +tgccgtttcaccagcccctgacaccgtgcctgtcccggacgtcgattcacgcggggcgattttacgccggca +atacaacctctctacttccccattaacctcttccgtcgcttcaggcactaatcttgtcctatatgctgcacc +gcttaaccccctcctgcctcttcaggatggcactaacactcacattatggctactgaggcctctaattatgc +tcaatatcgggtcgttcgagccacaatacgttatcgccctctggtgcctaacgcggttggtggttatgcggt +ctcaatttctttctggcctcagactacgaccactcccacctcggtcgatatgaattctataacctccaccga +tgtcagaatcctcgttcagccaggcctcgcctccgaactcgttatcccgagcgagcgcctccattaccgcaa +tcagggttggcggtctgtggagacctccggtgtggctgaggaagaggcgacctccgggttagtcatgctctg +catccatggttcccccgtgaattcctatactaacaccccctacactggggctttggggcttcttgatttcgc +gctcgagcttgaattccggaatttgacccccgggaacactaacacacgtgtttcccggtatactagtacagc +ccgacaccgcctccgccgcggtgctgatggcactgccgaacttacaacgacggcagctacacggttcatgaa +agacctgcatttta---ccgggatgaat---ggggttggtgagatcggtcgtggcatagccctgacattgtt +taatcttgctgatacacttctcggcgggttgccgacagaattaatttcgtcggcagggggccaattattcta +ctcccgccccgtcgtctcagccaatggcgagccggctgttaagctttatacatcagttgagaatgctcagca +ggacaagggtattgctataccccatgacatcgatcttggtgactctcgcgtcgttattcaggactatgacaa +ccagcatgagcaagaccgacctaccccgtcgcctgccccatcccgtcctttttccgtcttacgcgctaatga +tgttctgtggctttc-----------------------------gcttactgctgctgagtatgat------ +caagctacgtatggttcttccactaaccctgtgtatatctctgatactgttacatttgt---caatgttgct +acaggtgcccaggctgtcgcccgctccctagattggtctaaggtcacccttgatgggcgaccccttattact +at-----tcagcagtattctaaaacgttttatgtcc-tcccgcttcgtggtaagctctctttctgggaggct +gggactactaaa--gccggctatccctataattataacactgttgctagtgatcagatattgattgaaaatg +cggccggtcat------cgtgtcgccat-ttccacctataccactagtttggg--------------cgccg +gccctgtctcaatttc-tgcggttggtgtgcttgcaccacattctgccctggctgttcttgaagatactatt +gatt---------accccgcccgtg----cccacacttttgatgatttctgccctgagtgccgagcac---t +cggtttgcagggatgtgctttccaatc--------tactgtcgctgagcttcagcgtct------------- +--------aaagttgaaggtaggtaaaacccgggagtcttaattaa-tt----ct-tgct----------gt +gccc-ccct-------tc-tgct-cc-tt---tgc-tt--------------------tatt-t-------t +tcttttct----gcg----------------ttccgcgctcccct---------------------ggaaaa +aaaaa------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>JQ013792.1/17238/1-7238 |Hepatitis E virus strain W757 nonstructural polyprotein, viral accessory protein, and capsid protein genes, complete cds +----------------------------------------atg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcatcactactgccattgag---caagctgctctggc +cgcggccaactccgccttggcgaatgctgtggtggttcggccgtttttatcccggacccagacagatattct +tatcaatttaatgcaaccccgccagctcgtctttcgcccagaggtgttctggagtcaccctattcagcgtgt +tatacataatgagttggagcagta---ttgccgggccc-gggctgggcgttgccttgaggtcggagcacatc +cgagatctatcaatgacaaccctaatgtcttacaccggtgtttcctccggcctgttgggagggacgttcagc +gttggtactcggccccagcccgtggccccgctgccaactgccgccgctctgccctgcgcggcctccctcctg +ctgaccgtacttactgctttgatgggtttgctggctgtgcatttgcagccgaaaccggagttgccctttatt +ctttacacgatctgtggcccgctgatgtcgcagaggcgatggcacaccacgggatgacacgactatacgccg +tcttgcacctt-cctcctgaggttttactaccgccaggcacttatcatacagcctcttaccttttgatccac +gacggtaatcgtgctgttgttacgtatgagggcgacactagtgccggctataaccatgatgtctctaccctc +cgcgcctggattcgtacgacaaagattgttggtgaccatcctttagttatagagcgggtccgtgctattggc +tgccactttgtgctgctgctcactgcagcccccgagccttcccccatgccctatgtcccgtatccccgttca +accgaggtgtatgtccgctcgatattcggcccgggc---------ggctccccttcccttttcccatcagct +t----------gctctaccaaatcca-cattccatgccgtgccggttcacatctgggataggctcatgctct +ttggtgccactctagatgaccaagcgttctgctgctcacggctcatgacttatctccgtggtatcagttata +aagttactgttggtgccctcgtcgctaacgagggttggaacgcttctgaggacgctcttactgccgtgataa +ctgcagcatatcttaccatctgccaccagcgctatttgcgcacccaggcaatttccaagggtatgcgccgcc +tggagcttgagcactctcagaagttcatctccaggctctatagttggctgtttgaaaaatc---------cg +gtcgtgattacatacctggccggcagctgcagttctacgcacaatgccggcgctggctctcggctggtttcc +atctggaccctagggtactcgtctttgacgagtcagtacactgt---cgctgtcggagtctcctaaagaa-- +----tgtggctaggaaggcctgctgtttcatgaagtggctcggtcaaga------gtgctcttgctttttag +----------------agcccgtagaaggtttacttggtgatcagggc--------catgacaatgaggctt +atgaggggtctgatgttgaccccgctgagcctgcccctaccgatatatcagggacttatgtcgtccatgggc +ggcagcttgttgatttgtaccgggcgcttaacatcccgcgtgatctcgaggctcgcgcagctcgcctatccg +ccactgttgagattaccactggcccagcccgtcttgaatgccgtacagtgctgggcaataaaaccttccgca +ccacagtcactgatggtgctgccctggaggcaaacggccc------------------------cgagcagt +acgtgctttcatttgatgaggcccgccagtgtgtgagtgcagggccacatagcctagcctacgagctcaccc +ctggtggcctaaaagtcatgatttcatct-------aatggcttagactgtacggctctcttcccc---cct +gggagggccccgaatgtggaacctgcagaggttgcagccttctgtgctgctctgtatagatacaacaggacc +attcagcgccattcagtcgtcggcgggctgtggttgcatcctgaggggttactcggctgtttcccccccttc +tcccccggccatctgtgggagtccgcaaacccattttgcggcgagagtacactctacactagaacctggtcc +acgtccggcttctctagtgattttgccccccttgaggcaggtgttcaaaaccccccttc---tgac------ +-cggcctcatcactcggacccccctgagcatgccac-----------------ccctgctcc---------- +---------ggcgttgccg---------------------------------------------tctatcag +ccc--------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +--------------------------------------------------------gtctcg---------- +-----ggcacct-------------------------------------------------------gctcc +tccgcaggt--------------------------------------aacggttcgtaaccgccggc----- +-------------------tcctccacacttacccggacggtgctaaagtttattcggggtctttgtttgag +tcagactgtgactggttggttaatgcatccaaccccggacaccgtccgggcggcggtctctgtcacgccttt +taccagcgcttcccccagtcct------tcgacccggccaagtttgttatgcgtgatgg---gttggctgcg +tacaccctgacacctcgcccgattattcacgcagttgctcccgactatagagccgcacataaccctaaaagg +ctcgaggcagcataccgtgagacttgttcccgccttggtacagctgcctatccgttgcttggctcaggtatc +tatcaagtccccgttggcccgagttttgatgcttgggaacggaaccatcgtccgggagatgagctttaccta +actgaactagctactgcg-------------------------------------------------tggtt +tgaggccaacagaccagcccgatctcctgcacctacaatagatgttgcggccccgacggctggccctgtccc +gggggtcagctcccccgcagaggctgttggagagccagccttacctgctttagtgataactgaggatgctgc +ta------------ggacggctaacctcgcgttgaagatcg------------actctgcgaccgaggtcgg +ccgcgcatgt---gctggctgcactgtcagccctggggttgttcactataagttcactgcaggcgtccctgg +ctccggtaagtcgaggtctatacagcagggcgatgttgacgtcgtggtcgtgcccacccgtgagcttaggaa +cagctggcgccggcgtgggtttgccgcattcacacctcacacggccgcccgtgttacttgcggccgccgtgt +tgtgattgatgaagcaccgtccctcccgccccacttgttgttgttgcatatgcaacgcgcttcatcagttca +ccttcttggcgacccgaaccaaattcctgcaattgattttgagcatgccggtcttgtccctgcgctccgccc +tgagttggcgcccactagctggtggcatgtcacgcaccgctgccccgcggacgtctgcgagctcatacgagg +ggcgtatcctaaaatccatactaccagtcgtgtgctgaggtctctgttctggggtgac------ccacctgt +cggtcagaaactggtgtttacacaagccgctaaggcggccaatcctggtgcgataaccgtccatgaggccca +gggagccacattcacagagaccaccattattgcgacgtccgatgcaaggggccttattcagtcatctagggc +gcatgctattgtagcacttaccaggcatacggagaagtgtgttatattggatgcccctggtctgctccgcga +ggttggtatatcggatgcaatagttaataacttt------------------------------ttcttagc +cggcg--gggagatcggccaccaccgcccttctgtgatacctcgcggtaatcccgatcagaatcttgaaat- +-----cctccaggcgtttcccccctcttgtcagatcagcgcctatcaccagctagccgaagagcttggtcac +cggcctgccccggtggccgctctcctcccgccctgcccagaacttgagcagggcttgctatacatgccacag +gagcttgcggtctctgacagcgtcttggtcttcgagcttaccgatatagtccactgccgtatggctgcccct +agccagcgcaaagctgtgctttcaacacttgttgggaggtacgggcgtcgtacgaagctgtatgatgccgcc +cactcagacgtccgcgagtcgctcactaggttcatccccaccattggcccagttcaggccacaacatgcgaa +ttgtatgaactcgtagaggccatggtggagaagggccaggatggttctgctgtactggagcttgacctctgt +aaccgggatgtgtctcgaataacattcttccagaaagactgtaacaagtttacaaccggtgaaactattgct +cacggcaaggtgggccagggcatatcggcttggagtaaaactttctgcgccctattcggtccttggttccgg +gccattgagaaggagatactgaccctgctcccgcccaacatcttctatggtgatgcctatgaggattctgta +ttttctgcggccgtcactggggcaggttcaagtatg---gtctttgagaatgatttttcagagtttgacagc +acccagaataacttctcgct------------------tggtctcgaatgtgtgatcatggaggaatgtggc +atgccacagtggctggttaggctgtaccacttagttcgatccgcttggattctgcaggcccctaaggaatct +ttaaaaggcttttggaagaagcactctggcgaacctggcacgttactctggaatactatctggaatatggca +gtcatatcgcactgctatgagttccgcgacttcaaagccgctgcattcaaaggggatgactcggtggtcctc +tgtggtgactatcgccagagccgcttcgctgcgactctaattgcaggctgcgggctcaaacttaaggtagat +taccgacctgtcgggctctacgctggagttgtggttgctcccggtcttggtgttttacctgacgtcgttcgg +ttcgctgggcggctgtcagaaaagaactggggccctggccctgagagggctgagcagctacgcttggccgtt +tgtgactttttgaggaagttgacgaatgtggctcaggtttgtgtcgatgttgtttctcgtg-------ttta +tggggtgagcccagggcttgtacataaccttattggcatgttgcagactattgctgacggcaaagcccatta +cactgagagcgtgaagcctgtgctggaccttacaaattccattatacagaggttggaatgaataacatgtt- +t----------------tctgcatcacctatggg------------ctcaccatgtgccttaggtctattct +gctgttgttcttcatgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatcttcat---- +--------------ccaaccaaccccttcgccgccgacgttgacacacattccgggtctggagcccgtcccc +ggcagccggcccg---------------cccccttggttcctcctggcgtgacttgtccca----------- +------gcgcccccccgctggcccccgccgtcgatctacccca---------actggggctgcgccgctaac +tgccgtgtcgcccgctcctgacaccgcgccagtcccagacgttgactcacgtggggcgatcttacgacggca +gtataatctctcaacctcgcctttaacttcttctgtagcctctggcactaatcttgtcttatatgctgcacc +gcttaacccccttctgcctcttcaggacggtacaaatacccatattatggcaactgaggcgtctaactatgc +tcaatatcgggtagcccgagctacaatacgctaccgtcctcttgtacctaatgcagttggcggctatgcagt +ctcaatttctttctggcctcaaactaccaccacccctacttcggttgatatgaattccatcacttccaccga +tgttaggattcttgttcagcccggtctggcctctgaactggtcataccgagtgagcgcctccactaccgcaa +ccagggctggcgatctgtggagacctccggtgtggctgaggaagaggctacctccgggctggtcatgctctg +catccatggctctcctgtgaattcctatactaacaccccctataccggggctctggggcttctagactttgc +gcttgagcttgagttccggaatttaacccccgggaacactaacacccgtgtttcccggtatactagcacagc +ccgacaccgtctccgtcgcggcgccgatggcactgccgagcttacaaccacggcagctacacggtttatgaa +agatctgcacttta---ccgggatgaat---ggggtcggtgagatcggccgtggcatagccctgacattatt +taatcttgctgatacacttcttggtgggttaccgacagaattaatttcgtcggcagggggtcaactatttta +ctcccgccccgtcgtctcagccaatggcgagccgactgttaagctctacacatcagttgagaacgctcagca +ggataagggtatcgccataccccatgacatcgatcttggcgactcccgtgttgttattcaggactatgacaa +ccagcacgaacaagaccggcctaccccgtcgccggctccatcccgccctttctctgttctacgtgctaatga +tgtcttgtggctttc-----------------------------gcttactgctgcagagtatgat------ +caatccacgtatggctcctccactaaccctgtctatgtctctgatactgtcacatttgt---taatgttgca +accggagctcaggctgttgcccgttcccttgattggtctaaggtcactctggatggtcggcagctcacgacc +at-----tcagcagtattctaaaacattttatgtgc-tcccgcttcgtggcaagctctccttctgggaagcc +gggaccactaaa--gctggctacccctacaattataacactgttgctagtgatcagattctgatcgagaatg +gggccggccac------cgtgttgctat-ctctacctataccacgagtttagg--------------tgctg +gccccgtctcgatctc-tgcggttggtgtgctagctccgcactccgtcttggctgtccttgaggatactata +gatt---------accctgctcgtg----cccatacttttgatgatttctgccctgagtgccgagtcc---t +tggcttgcaggggtgtgcttttcaatc--------tactgttgctgagcttcagcgtct------------- +--------taagatgaaggtaggtaaaacccgggagtcttaattaa-tt----cc-tctt----------gt +gccc-cctt-------ct-atgt-tt-cc---ccc-tt--------------------tatt-t-------c +ttctttct----gcg----------------ttccgcgctcccct---------------------ggaaaa +aaa--------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>JQ013793.1/17281/1-7281 |Hepatitis E virus strain TLS18516 nonstructural polyprotein gene, partial cds; and viral accessory protein and capsid protein genes, complete cds +------------------------------------------------------------------------ +-------gaggcccatcagtttatcaaggctcctggcatcacaaccgccatcgag---caagctgctctggc +tgcggccaactctgccttggcgaatgctgtggtaattcggccgtttctatcccggacacagactgagattct +cattaacctcatgcaaccccggcagctggttttccgcccggaggttttctggaatcaccccatccaacgtgt +tatacataacgagctggagcagta---ttgccgagctc-gtgcggggcgctgccttgaggttggagcccacc +caaggtctattaaygataacccaaatgtcctccaccggtgtttccttcggcctgttggaagagacgtccagc +gatggtactccgcccccacccgcggccccgccgctaactgccgtcgctctgcgctgcgcggtctccctcctg +ttgatcgtacttactgttttgatgggttctctggctgtgctttcgcagctgagactggtattgcactctact +ccctacatgacttgtggcckgctgatgtcgcggaggcaatggcgcaccacgggatgacacgcctgtatgctg +tgttacacctt-ccccctgaggttctgctgccaccgggtacctatcatactacctcctaccttctgattcac +gacggcagccgtgctgtcgtgacttacgagggtgacactagtgccggctacaaccatgatgtttctaccctt +cgtgcctggatccgcacgacgaaaattgtcggcgaccacccgctggtgatagagcgcgtccgcgcgattggc +tgccattttgtattgttgcttactgccgcccccgaaccgtcacccatgccctatgtccctttcccccggtca +acagaggtgtatgttcgttcaatatttggcccgggt---------ggctcgccctctctctttccatcagct +t----------gctctacaaaatcta-cttttcatgccgtccctgctcacatctgggataggctcatgcttt +tcggcgccaccctggacgaccaggccttctgctgttcgcggcttatgacttaccttcgtggtattagttata +aagttactgttggcgctcttgtcgccaacgaggggtggaatgcctctgaggatgccctcactgcggtgataa +ccgcggcttaccttactatctgycaccaacgctaccttcgtacccaggcgatctctaaaggcatgcgtcggc +tggaggttgagcatgcccaaaaatttatcaccaggctctatagctggctgtttgaaaagtc---------cg +gccgcgactacatccctggccgccaactccaattttacgcgcagtgccggcgctggctttctgccggcttcc +acttggaccctagagtgctcgtctttgatgagtctgtgcactgc---cgttgtaggagttttgtgaagaa-- +----tgtgactaggaagatctgctgctttatgaagtggcttggtcagga------gtgcacctgtttcttgg +----------------agcctgcggagggcctgctcggcgatgttgga--------catgacaatgaagctt +atgaggggtctgaggttgaccccgctgagcccgccttttctgacatatctgggacttacactgttcatgggc +aactgttggtagatttatatagagcactcaatgtgccggatgatatagcagccagagccgcccgtttgtcag +ccaccgtcgagctggctgctagcccagggcggctagactgccgtactattctgggcaacaagaccttccgta +ctacaatcgttgatggtgcccagttagaggcaaatggtcc------------------------tgagcagt +atgttctctcatttgatgagacccaccagtgtatgggtgccgggccgcacagtctcgcgtatgagcttaccc +ccggtgggctgcgggttaaaatttcatct-------aatggcttggactgtgtggcggtcttcccc---cyt +gggcgggccccgagcccagcggctgcagaagyaacagccttctgtagcgccctgtataggtacaataggacc +atccagcggcattcacttgtcggtgggttatggttacacccagaggggctgttgggtctcttcccacccttt +tcccccgggcatttttgggagtccgcaaatccgttttctggtgagagcactctctacaccagaacctggtcc +acgtctggcttctccagtgatttttcaccgcctgaggcggctgttgatgcccccccccccgccgac------ +-ccgccttacgggccggcccctgttagtgcaggcgy-----------------tcgagcccc---------- +---------gctgcccccc----ccc-----------------------------------cttcctgtgac +cccta------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------------gacccaccggcttgcccg-- +-ccggcatgcccggg-------------------------------------cttctcccgcataagccacc +tacgcaacc--------------------------------------accggctcgcaatcgccgcc----- +-------------------ttctctatgtctacccggacggcgccaagatttattcagggtccctgtttgag +tctgattgcgactggctggtgaatgcgtctaacccaggccatcgcccaggtggcggcctttgccatgccttc +taccagcgtttccctcagtctt------ttgaccatactaagttcaccatgcgtgatgg---gcttgctgca +tacaccctgacacctcgcccgatcatccatgcagttgcccctgactatagggttgcccacaaccccaaaaga +ctggaagcagcgtaccgtgagacttgttctcgtctcggcacggcagcttacccgctgctgggctcgggcatc +tatcaggtccctgtcggcccgagctttgatgcctgggagcgaaaccaccgacccggcgatgagctttatctc +accgagcctgccaccgcc-------------------------------------------------tggtt +tgaggccaataggcctgcccgactctctacactcactactcaagatatagccccggccgattcccctgcggc +cggaaccgatccttcgcctgagcctgcccgcggtccggcactgcccgccctgaccataacggaggatacagc +ca------------ggacggccaacctcgcgctggagattg------------actccaggactgagctcgg +ccgtgcttgt---gccggctgcactgtcaacccaggagttgttcactaccaattcactgcgggtgttcctgg +gtctggcaaatctagatctatacagcagggcgacgtagatgtggtggttgtgcccacccgcgagcttcgcaa +cagctggcgccgccgcggatttgccgcgttcacgccccattcggccgcccgtgtcaccagtggccggcgtgt +tgtaattgatgaagcaccgtctctcccgccccacctgctgctactgcacatgcagcgcgcctcatcggtgca +tcttcttggtgacccgaaccagatccctgcaattgattttgagcatgctggtcttgttcctgcaatccgccc +tgagctggcccccacaagctggtggcatgtcacgcaccggtgccccgcagatgtctgcgagcttatacgcgg +ggcgtatcctaagatccagactaccagccgtgtgttgaggtcactgttttggggcgac------cctcctgt +tggccagaggctggttttcacacaagccgcgaaggcagctaaccctggttcaatcactgttcatgaggccca +gggggccacatttacagagactactattatcgcgacggctgatgctagaggtcttattcagtcgtcccgggc +gcacgctattgtcgcgctcacccggcacacagagaaatgtgttatcctggatgcccctgggctgcttcgcga +ggtcggcatatcggacgtgatagtaaataacttc------------------------------tttttagc +cgggg--gtgaggttggccaccaccgcccctctgtcatacctcgcggtaatcctgaccgaaacctcgacac- +-----ccttcaggctttccctccatcttgccagattagtgcttatcatcagctggctgaggaacttggccac +cggcctgcgcctgtggctgctgtcctgccgccctgccctgaacttgagcagggtctactttacatgccgcag +gagcttacagtgtctgacagtgtcttggtctttgagctgactgatatagtccactgtcgtatggctgccccc +agccagcggaaagccgtcctctcgacgctcgtcgggaggtacgggcgccggacgagactgtaygaagctgcc +cactcagacgtgcgtgaatccctcgcaaggtttattcccaccataggccctgtgcaggctacaacatgcgag +ctttatgagctggttgaggcgatggtcgagaaaggtcaagacgggtcagctgtgctcgagctcgacctttgt +agccgagatgtgtcccgtataacgtttttccagaaagactgcaataagtttacaaccggagagaccattgcc +cacggcaaagtaggccagggaatttcagcctggagcaagactttctgcgctctttttggcccctggtttcga +gccatcgagaagcagatactagccctgctcccgcccaacatcttctatggtgaygcttatgaggactctgtg +ttctctgcagctgtcactggtgcggggtcgagcatg---gtattcgagaatgacttctcggagtttgacagc +acccaaaacaacttctcact------------------cggccttgaatgtgtcattatggaagaatgtggt +atgccccagtggctagttaggttataccatctggtgcggtctgcatggatcctacaggccccaaaggagtct +ttaaaaggtttttggaagaagcattctggcgagcctggtacattactttggaacaccgtttggaatatggca +gtcatagcccattgttatgagttccgcgatctcagggctgccgcatttaaaggggatgactcagtggtcctt +tgtagcgactatcgtcagagtcgttttgcggcggccctaattgcaggctgtgggctcaagcttaaagttgac +taccgtcccattgggctttatgccggaattgtggttgctcctggtcttggaacgctgcctgatgtcgtccgg +tttgctggtcggctgtcagaaaagaattggggccctggccccgaacgggccgagcagctacgccttgctgtt +tgtgatttyctgagaaagttgacgaatgttgctcaggtttgtgttgatgttgtgtctcgtg-------ttta +tggggtcagccctgggcttgtgcataaccttattggtatgttgcagactattgctgatggcaaagctcacta +tactgaractgtgaagcctgttttagatcttacaaactctattgtgcagaggttggaatgaataacatgtc- +t----------------tctgcatcgcccatggg------------atcgccatgcgccctggggctattct +gctgttgctcctcgtgtgtttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccggctggcc------------gccgtcgtgggcg-gcgcagcggcggttc +cggcggtg-gtttctggggtgacagg--attgattctcagcccttcg----ccctcccctatcttcat---- +--------------ccaaccaaccccttcgccactgacgttgacccacattccgggtctggaacccgtcccc +gacagccagcccg---------------tccccttggcacctcttggcgcgacctgtccca----------- +------gcgcccctccgctgcctcgcgtcgtcgaactgcccca---------actggggctgcgccgttgac +cgctgtttcacctgcgcctgatacggcgcctgtcccagatgttgactcgcgcggggctattctccgccgtca +gtataatctctctacctcgcctttgacctcaactgttgcttcaggcactaacctcgttttgtatgctgcacc +gcttaatcctcttttgcctctccaggacggcactaatacccacattatggcgactgaggcatccaattatgc +tcaataccgggttgttcgggccacgattcgctatcgccctttggtgccaaatgccgtcggtggctatgcaat +ctctatttcyttctggccccagactactactactcccacttctgttgatatgaactcgattacctcaaccga +tgttaggattcttgtccaacctggcttggcttctgagcttgttataccgagtgagcgcctccattaccgtaa +tcagggttggcgctctgtggagacctccggtgtggctgaggaggaggccacctccgggctggttatgctttg +tatacatggctcccccgtgaactcatatactaataccccctatacaggggctttaggactgcttgactttgc +tcttgagatcgagtttagaaacttgaccccggggaatactaacacacgcgtttcccggtacaccagtactgc +ccgccatcgcttacgccgtggcgccgatgggaccgccgagttgacaaccacggcggccacacggttcatgaa +agatcttcatttta---ctgggacgaat---ggggttggtgaaattggccgtggcatagccctaaccttgtt +caacttggctgatacacttcttggaggtttaccgacagaactaatttcgtcggccgggggtcaggtrttcta +ctcccgtcctgtcgtctcggccaatggcgagccgactgtcaagttgtatacatcagtcgagaatgcacaaca +ggacaagggcatcgcgataccgcatgacattgatcttggtgattctcgagttgttatccaggactatgataa +ccaacacgagcaggaccggcccaccccgtcgccagccccctctcgccctttttccgtcctacgtgctaatga +tgtgctgtggctttc-----------------------------attgaccgctgctgagtatgat------ +caaaccacatatggttcgtcaactaaccctatgtatgtttcggatacagttacattcgt---taatgtggca +acaggtgcgcaggctgtcgcccgttcccttgactggtctaaagtcactttggatgggcggccacttaccacc +at-----actgcagcattccaaaacattttatgtac-tccctctgcgcggtaagctttccttctgggaggct +ggcactactaag--gccggttatccctataattacaacactaccgccagtgaccaaattctaattgaaaatg +cagctgaccat------cgtgttgctgt-ttctacttatactacaagtttggg--------------tgccg +gcccagtgtctatctc-cgcggtcggtgtgcttgccccgcattctgtcctagctgttctcgaggatactgtt +gact---------atcccgcccgcg----cccacacttttgatgatttctgccctgagtgccgtactc---t +tggcttgcagggctgtgcttttcaatc--------tactgttgctgagctccaacgcct------------- +--------taaggtgaaggtgggtaaaacccgggagtcttaattaa-tt----ct-tgct----------gt +gccc-tcct-------tc-tttg-ctgtt---tct-tt--------------------tatt-t-------t +ctatttct----gcg----------------ctccgcgcwccctg---------------------gaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>JQ013795.1/17233/1-7233 |Hepatitis E virus strain TR02 nonstructural polyprotein, viral accessory protein, and capsid protein genes, complete cds +-----------------------------------------tg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggctaactccgccttggcgaatgctgtggtggtccggccgttcttgtcccgtactcagactgacatcct +tattaatctgatgcaaccccggcagctcgtattccgtcctgaagttttgtggaatcatccgatccagcgagt +catacacaacgaactggagcaata---ctgccgagctc-gcgccggtcgctgtctggaagtaggggctcatc +caagatctattaatgacaaccctaatgttttgcaccggtgcttcctccgcccggttgggagagatgtgcagc +gttggtactccgccccgacccgcggcccagcggctaattgccgccgttctgcactacgcggcctaccccctg +tcgaccgtacctactgcttcgacgggttttcccgctgtgccttcgctgctgagactggaattgctttatact +cattacatgacctttggcctgctgacgttgcggaagccatggcccgccacgggatgacacgcttgtatgcag +cccttcactta-ccccccgaggttttgttaccacctggtacttatcataccacttcttatctgttgattcac +gacggcgatcgcgctgtcgtgacctatgagggggacactagtgcaggctataatcatgatgtgtccattctc +cgcgcatggattcgtacaactaagatagtcggtgatcacccgctggtcatagagagggtccgtgctatcggc +tgccattttgtgctgctcctcaccgccgcccccgaaccatctcctatgccttatgttccataccctcgctca +acagaggtgtatgttaggtctatatttggccccggc---------gggtcgccttctctttttccatcagcc +t----------gctccaccaaatcta-cattccatgcggtcccggtccatatctgggaccggctcatgctct +ttggcgccaccctagacgaccaagccttttgctgctcgcggcttatgacctatctccgtgggatcagttata +aggtgaccgttggcgcattagtcgccaacgaaggctggaacgcctcggaggatgcgctcactgctgtgatca +ctgcagcgtatttgactatttgccatcaacgctacctccggactcaggccatatctaagggcatgcgccggc +tagaggttgagcacgcccagaagtttattactaggctttatagttggttgtttgagaagtc---------cg +gccgtgactatatccccggccgtcaactccagttttatgcacagtgccgccgctggctctctgccggcttcc +atttagaccccagggtccttgtttttgacgaggcggttccctgc---cgctgtaggagctttttgaagaa-- +----agttgccggtaagttttgttgctttatgaagtggttagggcagga------gtgcacttgttttctgg +----------------agccagccgarggcttgattggtgattgtggc--------cacgataacgaggcct +ttgarggctccgargtagatcctgccgagcctgcccaccttgatgtctctgggacctatgcagtttgtggcc +gccagcttgaggctctatatcgggcgctcaatatcccacacgacatcgcggcccgtgcgtyacgcctgacgg +ccaccgtggagctcactgctagtccaggccacctcgaatgccgtacggtgcttggaaataagaccttccgca +catcaataactgatggtgcccaccttgaggttaatggccc------------------------tgagcagt +acgttctgacatttgacgactcccgtcaagcgatgggggctgggcctcatagtcttacatatgwgctcaccc +ctgctggcctgcaggttaaaatatcttct-------aatggcctagattgcgttgccgtcttcccc---cct +ggtggggcgccaagtgccccaccgggtgaggttgcagctttctgcagcgccttgtacagatacaacagattc +acccagcgccattcgctaactggagggttgtggttgcatcctgaggggctcttgggcctattccctcctttc +tcccctgggcacgtttgggagtccgcaaatcccttttgcggtgagggcacactttacacccggacttggtcc +acatctggtttctcaagtgatttctccccccctgaggcggcttttgccgctccagcccccgatgg----ggg +gctgccttcaggtaccccctcttctgctagtgatgt-----------------ctgggtgct---------- +---------cccgccgccc----tctgaggagt--------------cagtggctgcctcaccgccggcagc +ctcggt------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------------------------tagtaagcctactagcccgcccagc +cctgccatatctaaa-------------------------------------cctcccgcttgtaagccgtc +cccgccgcc--------------------------------------gccggctcgtaaccgccggc----- +-------------------ttctctatacttatccggatggggctaaggtctatgcgggctccctgtttgag +tcagactgtgactggttggttaatgcatctaaccctggccaccgccctggcggcggcctttgccacgccttc +taccagcgcttcccagagtcgt------ttcatccgactgattttatcatgcgcgatgg---cctcgctgcc +tacaccttgaccccacgtccgatcattcatgctgtggcccccgattatagggttgagcagaaccccaagagg +ctggaggcggcgtaccgcgagacctgttcccgcctcggtacagccgcatacccattgctggggtytgggatt +tatcaagttcctgtgggtttaagtttcgatgcctgggagcgtaatcatcgcccaggtgacgagctctatctt +accgagcccgccgccgcg-------------------------------------------------tggtt +tgaggctaataaaccaaccca--------------------------------------------------- +------------------------------------------accagccttaacgattactgaggacactgc +tc------------gcacggccaacctcgcgcttgagatcg------------attctgctaccgaggtggg +tcgtgcctgc---actggctgtactattagccctgggatcgttcattaccagttcactgctggggtacctgg +ttccgggaagtctaggtccatacaacaaggggacgtcgatgtcgtggtcgttccaacccgcgagctccgcaa +tagctggcggcgccgtggttttgctgcttttacgccccacacggcagcccgtgtcacagccggccggcgtgt +cgtgattgatgaagcaccttctctcccgccacacttgctattgcttcacatgcagcgagcttcgtcggtcca +tctcctcggcgatcccaaccagatccccgccattgatttcgagcatgcaggtctggtcccggcgattcgccc +cgagcttgccccaactagttggtggcatgttacacaccgttgccctgccgacgtgtgcgagctcatacgcgg +ggcttatcctaagattcaaaccaccagccgtgtgatgcgctctttgttttggaatgag------cctgcggt +aggccagaagttggtcttcacgcaggcagctaaggcagccaatcccggcgcaattactgtccatgaggctca +gggcgccacttttactgagactaccattattgctacggccgatgccaggggccttattcagtcctcccgtgc +gcatgcaatagtcgcgctcacccgtcatacagaaaaatgtgtcatcttggacgcccctggcctactgcgtga +ggttggtatctctgatataattgttaataacttc------------------------------tttctggc +tggtg--gtgaggttggccaccatcgcccctccactataccccgaggtaacccagaccagaatttaaatac- +-----cttgcaggcattccctccatcttgtcaaattagtgcctaccaccagctagctgaggagctgggccac +cgacccgccccggtggctgctgtgctaccgccctgccctgagcttgagcagggtctactttatatgccacaa +gaacttacagtgtccgatagtgttttggtttttgagctcacggacatagttcactgccgaatggcggccccc +agccagcggaaggctgtcctctcaacacttgtcggcaggtacggccgccgaacgaagttgtacgaggcggct +cattctgacgtccgtgagtctttaggaagatttatccctactatcggaccggttcaggccaccacatgtgaa +ttatatgagttggtggaggccatggttgagaagggccaggacggttytgctgtgctagagcttgatctctgt +agccgagatgtttcgcgtatcacgttcttccagaaggattgtaataaatttacaacaggcgaaactattgcc +cacggcaaggtgggccagggtatctcggcctggagtaagaccttttgcgctctatttggaccgtggttccgt +gccattgagaaagagatcctggccctgctcccgcccaatattttctacggtgatgcctttgaagagtcagtg +ttttctgcagccatctctggagcgggtactagtatg---gtctttgagaatgatttctccgaatttgacagc +acccaaaacaacttctccct------------------cggcctcgagtgtgtcattatggaagagtgtggt +atgccccagtggcttatccggctgtaccatttggtgaggtcagcctggactttgcaggccccgaaagagtcc +ttgaaaggcttttggaagaagcactctggcgagcctggtacactcctctggaacaccgtctggaacatggcg +attatagcgcattgctatgaatttcgcgacttgagagtggcagcgttcaaaggggatgattcagtggtcctt +tgtagtgactatcgccagagccgtaatgcggctactctgattgctggttgtgggttaaaactgaaggttgac +taccgccctatcgggttatacgccggcgtcgtggtcgcccctggtctcggggcgctccccgacrttgtccgg +tttgccggccggctatctgagaagaattggggcccgggccccgagcgcgccgaacagctgcgcttagcagtt +tgtgatttcctccgaaggttgacgaatgtcgcgcaggtctgtgttgatgttgtgtcccgtg-------ttta +tgaagttagtcccgggttggtacataaccttattggcatgctgcagactattgctgatgggaaggctcattt +cactgagactgtcaagcctgtacttgatcttacaaactctatcatacagaggttggaatgaataacatgtt- +g----------------tgtgcattgcccatggg------------atcgccatgcgccctcgggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagtcgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaacccggggctggagctcgccctc +gacagccgccccg---------------tccccttggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgccgccccccgccgtcgatctacccca---------gctggggctgcgccgctaac +tgccgtctctcctgctcccgatacggctccagtccccgacgttgattctcgcggtgctatcctgcgccgcca +gtacaacttgtctacttcccccctgacctcctctgttgcttctggcaccaatcttgtcttatatgctgcccc +gcttaatccccttttacctctccaggatggcaccaacactcatatcatggcgactgaggcgtctaattacgc +ccagtatcgggttgtccgggccacaattcgctaccgccctttggtgccgaatgctgttggtggctatgcaat +ttctatttctttttggccccagaccacaactacccctacctctgttgatatgaattctatcacttctactga +tgttaggatcttggtccagcccggtatagcctctgagctggttatcccgagcgagcgcctccattaccgcaa +tcagggttggcgatctgttgagacctcgggtgtggctgaggaggaggcgacatcgggcctggttatgctctg +tattcatggctctcctgtaaactcctacaccaatacgccctatactggggcattaggccttcttgatttcgc +actcgagctcgaattcaggaatttgacccctgggaacactaacacccgtgtttcccggtacactagtacggc +ccgccaccgcttgcgccgtggcgctgacggaactgctgagctcacgaccactgcagccacgcgcttcatgaa +ggacctgcacttca---ctgggacgaat---ggcgtcggtgaggtgggccgtggcatagccttaaccttatt +caaccttgctgatacacttctcggcggtctgccgacagaattgatttcgtcggccggaggtcagctctttta +ctcccgcccagttgtctcggccaatggcgagccgactgtcaaattgtatacttccgtcgagaatgcacagca +ggatagggstattgctatacctcatgacatagatctaggggattcccgcgtggttatccaggactacgataa +ccagcatgagcaggataggcctaccccttcgccggccccgtctcgccccttttcggtcctccgtgctaatga +tgttttgtggctctc-----------------------------ccttaccgctgctgagtatgac------ +caaactacttatggctcatcgaccaaccctatgtatgtctcagacactgtcacttttgt---caatgtggct +acgggagcccaggctgtcgctcgctcccttgactggtctaaggtcaccttggatggtcgacctcttactacc +at-----ccagcagtattctaagacattttatgtgc-tcccacttcgcggtaagctttctttttgggaggct +ggcactactaag--gctgggtatccctacaactataataccactgctagtgaccagattttgatagagaatg +cagccggccac------cgcgttgctat-atctacttatactactagtcttgg--------------tgctg +gcccagtgtctgtctc-tgcggtcggcgttcttgccccacacgctgctctcgctgtgcttgaagatactatt +gatt---------accctgctcgcg----cccatacttttgatgatttctgccctgaatgccgtaatc---t +tggcctacagggctgtgctttccaatc--------cactattgctgaacttcagcgcct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-ttt---ta-ccct----------gt +gccc-cct--------tc-tagg-tt-tt----gc-tt-ta-------------------tt-t-------c +ttttttct----gcg----------------tttcgcgcwcccms---------------------graaaa +aaaaaaa---------------aaaaaaaa------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>JQ993308.1/17244/1-7244 |Hepatitis E virus strain HEVZJ1, complete genome +---------------------------ggcagacca-cgtatg-------------t-----ggtcgacgc- +---catggaggcccatcagttcataaaggctcctggcgtcactactgctatcgag---caggcagctctagc +agcggccaactccgccctggcgaatgctgtggtggttcggcctttcctttcccggctacagacagagattct +gataaacctgatgcagccccggcagcttgttttccggcctgaggttctgtggaatcacccaatccagcgcgt +aatccacaacgaacttgagcagta---ctgccgagccc-gtgctggtcgctgccttgaggtgggagcccatc +cgcgttccattaatgataatcccaatgttctgcatcgctgctttttgaaaccccgcggtcgcgatgttcagc +ggtggtataccgcccctacccgcggccctgcagcgaactgccgccggtcggctcttcgtggacttccgcctg +ctgaccggacgtactgttttgatggtttctccgggtgtacgtttgctgctgagactggggttgctctttatt +cactgcacgacctatggcctgccgacgtcgcggaggcaatggcccgtcacggtatgacccggttgtatgcag +cccttcacctc-cccccggaggtgctacttcctcctggcacctatcataccacttcataccttttaattcat +gatggcgatcgtgctgtgatcacatatgagggtgactcgagtgcggggtacaatcatgatgtgtttatcctg +cgcgcctggatccgcaccaccaaggtcactggcgaccacccactggtcattgagcgggtccgggcggtaggg +tgccattttgtgcttttgctcacagccgcgcctgaaccgtcgccgatgccttacgtcccataccctcgctcc +actgaggtctatgtccggtccatttttggaccgggc---------ggttcgccctctctcttcccatctgct +t----------gctcgactaagtcta-catttcacgccgtccctgtgcatatttgggacaggctcatgcttt +ttggtgcgacccttgatgaccaggctttttgctgctcgaggctcatgacgtacctccgtggcattagttata +aggttacagtcggtgctctcgttgccaacgaaggctggaacgcctccgaggacgcgctgactgctgtaatta +ctgcagcttatcttaccatttgtcatcagcggtatcttcgcacgcgggccatttcaaaggggatgaagagat +tggagcttgaacatgcacagaaatttataacgcgcctttatagttggctgtttgagaagtc---------cg +gccgtgattacatccccggccgtcagttgcagttttatgcccagtgtcgccggtggctgtctgccggctttc +atctcgacccacgcgtacttgtatttgatgaagcagccccctgc---cgctgtcgtaattttcttcggaa-- +----agctgcccacaagttttgctgcttcatgcggtggttaggtcagga------ctgcacctgtttcctcc +----------------agcctatcgagggtcgggttggtgagcagggt--------tatgataatgaagcat +ttgaagggtcggatgttgaccctgctgaggaggcaactgtgagtatctctgggtcatatattgtaactggta +gccagctacagcctctatatcaggcgcttggtatcccctctgatcttgctgctcgtgccagccggctcgctg +ccactgttgaagtctctgatgcagatggccgcctcacctgcaaaactattatgggcaataaaactttctcaa +cagccttcactgatggtgcccagttggaggccaacgggcc------------------------ggagcagt +atgtgctgtcattcgacccgattaaacaaactatggccgccggcccgcataatcttagttacaccctgacac +ctgcaggccttgaaatacatgttgtctct-------gccgggcttgattgcaaggccgtttttcct---tcc +ggggttgcgaccccgtctacccctggggaggtgcctgccttctgctcagcattgtacagatttaaccgctgt +gttcagcggcactccctcattgggggtgtgtggtaccaccctgaggggctagtcggcctgtttccgccattc +tcccccggtcatagctgggagtctgctaaccccttttgtggggagagtaccctttacacccgtacctggtcg +gtatcgggcttctccagctgtttttctccacttgaaccaggggccccagacccgccccctcttgtt---gag +actgacac----------acctacagttgttgataa-tatgccc---------ccagttgtt-----tctgt +ac---------------cc----cttgagcaaa---tag--------------------cgcctccaccggg +ctctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tagataaggtagccggtccgaccgta +tctagcacccccgtt---------------gta-------------------ccaccagcaccagcgcagtc +tgtagttca--------------------------------------accatctgggcctcgccggcg---- +-----------------gctgcttcatacctatcctgatggctcgaaggtgtatgctggctccctttttgag +tccgagtgtacttggctggttaacgcatctaaccccggccaccgccctggcggcggcctctgtcatgcattc +taccagcggttcccagagtcat------ttgatcccgctgagttcgttatgtcggatgg---gtttgcagcc +tacaccctgtccccccggcctattatccacgcagttgcccccgactatcgggttgaacataaccctaagagg +cttgaggccgcttatcgggagacgtgctcccgtctcgggacggcagcttaccccttacttggcgccggtata +tataaggtgcctgttgggctgagctttgatgcctgggaacgcaaccaccggcccggggatgagctgtatctg +actgagccagccgtagct-------------------------------------------------tggtt +tgaggcaaaccggcccaccct--------------------------------------------------- +------------------------------------------cccagctcttaccattactgaggatactgc +gt------------gtacggcgaacctggcattagagctag------------actccgccactgaagttgg +ccgggcgtgt---gctggctgccgcgtcgagcccggtgttgtccattatcagtttacagcaggtgtccctgg +ctcgggtaaatcccggtcagtccagcagggggaggtggatgtggtagtagtaccaactcgtgagctgcgtaa +ctcgtggcggcgccgcgggttcgcagcttatacaccccacaccgcggcccgtgtcacacgtggtcgtagggt +tgttattgatgaggccccgtcgctccccccacacttgcttttgctgcatatgcagcgagcctcttcagttca +tctcctaggtgatcccaatcaaattcccgccattgactttgagcatgccggccttgttccagctattcgacc +ggagttggtcccgacaaaatggtggcacgtcactcatagatgcccagctgatgtctgtgagttaattcgtgg +tgcgtacccaaagatccagactgtgagtcgcgtactccgctctctgttctggggggaa------ccccctgt +gggtcagaagttggtgttcactcaggcagcgaaggccgcgaaccctggtgcgattacagtccacgaggctca +gggtgccacatttactgagactacaattatcgccacggcagatgcccgcgggctgattcagtcttccagggc +ccatgcgattgtggctctgacccgccacacagagaaatgtgtggttgttgacgccccgggcctcctccgtga +ggtcggcatctctgacgctattgttaataatttc------------------------------ttcctttc +tggcg--gccagattggtcagcatcgcccgtcagtcataccacgtggcactattgactgtaatgttaatac- +-----acttgatgcatttccgccctcctgccagttcagcgcctaccatcagcttgccgaggagcttggccat +cgaccggccccgattgctgctgtcttgcccccttgcccggagcttgaacagggcttgctctatatgcctcag +gagctcactacatcggacagcgtactaacattcgagcttacagatatagtgcactgccgtatggcggcgcct +agtcagcgtaaggcggtcctgtcgactcttgtcggtaggtatggtcgccgtacgaagctgtatgaagctgcc +catgcagatgttcgtgggtctctgaatcatttcatccctgagctccgccctatgagtgtcaccacctgcgag +ctctatgagcttgtggaggccatggttgagaaaggccaagacggctctgcggttctggagctcgacttgtgc +agccgcgatgtctcgcggataacatttttccagaaagactgtaataagttcacaactggtgaaacaatagcg +catggtaaagttgggcaggggatatctgcatggagtaaaaccttctgtgccctgtttggcccctggttccgt +gctattgaaaaagaaattctggctgtgcttgcacctaatgtattttatggtgatgcatatgaggacacagtt +ttggccgctgccgttgcaggagcctccggttgtaag---gtttttgagaatgatttttcagagtttgatagt +acccagaacaatttctcgct------------------tgggctggagtgtatgattatggaggagtgtggt +atgccgcagtggatgattcgactctaccatctcgtccgctccgcctgggtcctccaggccccgaaggagtcc +ctgcggggtttttggaagaaacattctggtgaacctggtactctactctggaatactgtctggaatatggca +gtcatagcccattgttatgagttccgtgacttaaaagttgcggcgtttaagggggatgattctgttgtgctc +tgtagcgactatcggcagagccgtgatgcagctgccttgattgctggctgtgggctgaagcttaaggtggat +tttaggcctattgggctgtatgctggtgttgttgtggccccaggtttaggaactctacctgatgttgttagg +tttgctgggcggctctcagagaaaaactgggggcccggtttggagagggcagagcagctacggctggctgtc +tgtgattttctgcgaaagttaacgaatgtggctcaggtttgtgtggatgttgtctcacaag-------tgta +tggtgttagccctggtctggtacataacctgattgggatgctccagactattgctgatggtaaggcgcactt +cactgaaacagttaaacctgttcttgatctgaccaactccatcatatatcgggtggaatgaataacatgttc +t----------------tttgctctgtgcatggag---------atgccgccatgcgctctcgggctcttct +gtttttgctcctcgtgtttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gtcgccgcgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaatcccttcgcatccgacattccaaccgcaaccggggctggagctcgccctc +ggcagccagcccg---------------tccactcggctccgcttggcacgaccaatccca----------- +------gcgccccgccgttcccgcccgtcgtcgacctgcccca---------gctggggcttcgccgctaac +agctgttgccccagcccctgacactgccccggtccctgacgtggactctcgtggtgctatattgcgccgcca +gtacaatctgtctacgtcaccgcttacgtccaccatcgctactggcactaatcttgtactatatgctgcccc +actgagccctctgctccccctccaggatgggactaatactcatatcatggccactgaggcctccaactatgc +tcagtatcgtgttgtccgtgccactatccggtaccggcctctggtgccgaatgcggttggcgggtacgccat +atccatctccttttggccccagacgacaaccaccccaacctccgttgacatgaactccatcacatctactga +tgtccgtatccttgttcagcctggtatagcctctgagcttgtgattcctagtgagcgcctgcattatcgcaa +tcagggttggcgctcagttgagacttctggtgtcgcggaggaggaggctacctctggccttgttatgctttg +tattcatggatcccctgtgaattcctacactaatacaccctatactggtgctctcggcctgctcgattttgc +gcttgagcttgaatttcgtaatttgacacctggcaatacgaatacgcgcgtctctcgttattctagcagtgc +gcgccacaagttacgccgagggcctgatggcactgccgagctgaccacgactgctgctacacgtttcatgaa +agatcttcatttta---ccgggactaat---ggtgttggtgaggttggccgtggtattgcgctaaccctgtt +taatcttgctgatacgcttctcggcgggctcccgacagaattgatttcgtcggctggaggccagttgttcta +ctcacgccccgtcgtctcagccaatggcgagccgacagtgaaactctacacttcagtcgagaatgctcagca +ggacaagggtatagccattccacatgatattgaccttggtgagtcccgagtggtgattcaggattatgataa +tcaacacgaacaagaccgtcccactccttcccctgctccctcacgccccttctcggtccttcgtgctaatga +tgtgctctggctttc-----------------------------attgaccgctgctgaatatgac------ +caaactacctatggttcttctaccaatcctatgtatgtttctgacactgtgacatttgt---taatgtagcg +accggtgcccagggggtttcccgttccctggactggtctaaagtcacccttgatggtcggccgcttacgact +at-----tcagcagtattctaagaccttctttgttc-taccccttcgcggtaagctttctttctgggaggct +ggcactactaaa--gctggctatccttataattataataccactgccagtgatcagattttaattgaaaatg +cgcctggtcac------cgtgtctgtat-ttccacctatactaccaatcttgg--------------ttccg +gtcctgtttctatctc-tgctgtaggtgtcctcgcacctcactctgtgctggccgctttggaggataccgtt +gatt---------accctgctcgtg----ctcataccttcgatgatttctgccctgagtgccgtgcgc---t +cggccttcagggctgtgcttttcaatc--------gactgtcgctgagctacagcgtct------------- +--------taaaatgaaggtgggtaaaactcgggagtattgattta-tt----tt-cctt----------gt +gcct-ccc--------tt------cggtt--ctgt-tt-c-ttt--------------tatt-t-------c +tcttttct----gcg----------------tttcgcgctccctg--------------------------- +---aaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------aaaaa------------------------- +------------------------------------------------------------------------ +----------- +>JQ740781.1/17252/1-7252 |Hepatitis E virus isolate CHNNJH2011, complete genome +---------------------------ggcagacca-cgtatg-------------t-----ggtcgacgc- +---catggaggcccaccagttcataaaggctcctggcgtcactactgctattgag---caggcagctctagc +agcggccaactccgccttggcgaatgctgtggtggttcggcctttcctatcccggctacagacagagatact +tattaacctgatgcagccccggcagcttgtctttcggcctgaggtcttgtggaaccacccaattcagcgtgt +gatccacaacgagctcgaacagta---ctgtcgagctc-gagccggccgctgccttgaagtgggtgcccacc +cacgatccatcaatgacaaccctaacgtcctccaccgctgcttcttgaaacctgtcggccgcgatgtccagc +ggtggtacactgcccccacccgtggccctgcagcgaactgtcgccggtcggccctccgtgggcttccacctg +ttgaccggacgtattgttttgacggcttctccggttgtacgtttgctgctgagaccgggattgcactttact +cactgcatgatttgtggcctgccgatgttgctgaggctatggcccgccatggcatgacccggttgtatgcag +ccctccacctt-cctccagaagtgctgcttccccccggaacttatcataccacctcataccttctcatccat +gacggtgatcgtgctgtaatcacatatgagggggattccagtgccgggtataatcatgatgtgtctattctc +cgtgcctggatccgtactactaaggtcaccggagatcacccgctagtgattgagcgggtccgggcagtaggc +tgccattttgtgctccttcttacagccgcacctgagccgtcgtcaatgacttatgttccataccctcgttct +accgaggtctatgtccggcctatcttcggccccggc---------ggctccccgtccctctttccgtctgcc +t----------gctctactaaatcca-tatttcatgccgttcttgtgcacatctgggacaggcttatgctct +tcggtgcgaccctcgacgatcaggctttctgttgttcgaggctaatgacatacctccgtggcattagttata +aagtcacggtcggcgctcttgtcgccaacgagggttggaatgcttccgaagacgcactgactgctgtgatta +ctgctgcttatcttactatttgccatcagagatatctccgcacacaggccatttcgaaaggaatgaagaggc +tggagcttgagcatgcgcaaaagttcataacacgcctttatagctggctgtttgaaaagtc---------tg +gccgtgattacatccctggtcgtcagttgcagttttatgctcaatgtcgccggtggttatccgccggcttcc +accttgaccctcgtgtgctcgtttttgatgaggcggccccttgc---cgctgtcgtagcttcctccgtaa-- +----agccgctcataaattttgttgtttcatgcggtggctcgggcagga------ctgtacctgctttctcc +----------------agcctgttgaggggagggtcggcgagcaaggt--------tatgataatgaagcgt +ttgaagggtcggatgttgatcccgctgaggaggccgttgtgagcatttctggatcttacattgtcactggta +gccagctacagcccctttatcaggcgctcggcaccccttctgaccttgctgcccgagccagtcggctcaccg +ctaccgttgaagtgacggatgccgatggtcgccttatctgtgaaactacaataggcaataagacttttaaaa +cagtttttactgatggtgcccagttagaggctaacgggcc------------------------agagcaat +atgtgctgtcgtttgatccggccaagcagaccatggctgccggcccacatagtcttagttatgccttgacat +ctactggccttgaggtgcgtgttgtttcc-------gccggactcgactgcaaggctgttttccca---tct +ggcgtagcgaccccctccgcccctggggaggtgtccgctttttgttcagccttgtacaggttcaatcgttgt +gtccagcggcattcccttatcgggggcctgtggtattaccctgaggggctaattggcctttttccgccgttt +tctcccggccacgcttgggagtccgccaatcctttctgtggggagagtaccctctacactcggacttggtca +gtgtcagggttctctagctgcttttccccgcttgagccctgtgccccggatttgtcaccgcctgct---gag +actgatat----------gcctgttgctattaatgt-cccatcc---------ccaactatc-----tctgc +actgcctcagccctcggcc----cccgaacggg---cgg--------------------ccccttcactaaa +cctag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttgatggcggtgttgtttcggcccta +tcggacgtccccgct---------------gcc-------------------ctcccggcaccagtgcagcc +cgtaaccca--------------------------------------tctatccgggccccgccggcg---- +-----------------gttacttcatacttatcctgatggctcaaaggtgtatgctggctccctttttgag +tctgagtgtacttggctggttaatgcatctaaccctggccaccgtcccggcggcggtttatgccatgcattt +taccaacgtttcccagagtcat------ttgaccccgccgagttcgtcatgtctgacgg---ccttgcggct +tataccctcaccccccggcctattattcatgctgtcgcccctgattaccggaaagaacataaccctaaaagg +cttgaggccgcttatcgggagacgtgctctcgccgcgggacggctgcttaccccttgctcggcgccggtata +tacaaagtgcctgttgggctgagttttgatgcctgggaacgtaaccatcgacctggggatgagctgtatctt +actgagccagccatagct-------------------------------------------------tggtt +tgaggctaaccgacctgctct--------------------------------------------------- +------------------------------------------ccccgccctcactattactgaggacacggc +ac------------gcacagcgaatctggcgctggagctgg------------actcagctaccgaggttgg +ccgggcatgt---gccggctgtcgtgttgagcctggtgtcgttcactaccaatttacggcgggtgtgcccga +ctccggtaagtcccgttcagttcagcagggtgaggtagatgtggtggtggtgccaactcgtgagctacgtaa +ttcgtggcggcaccgcgggttcgcagcctacacacctcatactgcggcccgtgtcacccgtggccgcagggt +tgtcattgacgaggccccatcgcttccaccgcatctacttttactccatatgcagagggcttcgtcagtcca +tcttcttggtgaccccaaccagatccctgccattgattttgagcatgctggccttgtcccggcgatccggcc +tgagcttgttccaacgaaatggtggcatcttacacacagatgtcctgccgatgtctgcgagctgattcgcgg +cgcatacccaaaaatccagaccgcaagccgtgtcctccgctctttattttggggggag------cccccggt +gggccagaagttggtatttacccaggcggcaaaggccgccaaccctggcgcaattacagttcatgaggccca +gggtgccacatttactgaaactactattattgccacagcagatgctcgcgggctgattcaatcctccagggc +ccacgctatcgtggccctcacgcgccacacggagaagtgtgtggttgttgacgcccctgggctccttcgtga +ggtcggcatttccgatgctatcgtcaataatttt------------------------------ttcctctc +tggtg--gccagattggtcaacaccgcccgtcagttatcccacgcggcactgtcgacagcaacgttgacac- +-----gcttgatgcatttccgccctcctgccaattcagtgcctatcaccagcttgcagaggagctaggccat +cgaccggccccaatcgctgccgtcctgcccccttgcccggagcttgagcaaggccttctttatatgccccag +gaattggctacgtctgatagtgtgcttacgtttgaactgacagacatagtgcactgccgtatggcggcacct +agtcagcgtaaagctgtcctgtccacccttgttggtaggtacggccgccgtactaagctgtatgaagccgcc +catacggatgtccgtggctccttaaaccactttatccctgagctcagccctattagtgttaccacctgtgag +ctttatgagcttgtagaggctatggtggagaagggccaggatggctctgcagtcttagagcttgatttgtgc +agccgtgatgtgtctcgtataacattctttcagaaggattgtaataaattcacaacaggtgaaacgatagca +cacggcaaggtcgggcaggggatatccgcgtggagtaagaccttctgtgccctgtttggtccatggttccgc +gctattgagaaggagatccttgcggcacttgcgcctaatgtattctatggtgacgcatatgaagatacagtc +ttggctgccgctgtggctggggctcctggctgcaag---gtttttgagaacgacttctctgagtttgatagt +actcaaaataattttccact------------------tgggttggagtgtataatcatggaggagtgtggc +atgccgcaatggatgatccgactttatcatcttgtccgctctgcctgggtgctgcaggccccaaaagagtcc +ctacgagggttttggaagaagcactcaggtgagcctggtaccttgttgtggaacactgtttggaacatggcg +gttattgcacactgctatgagtttcgtgatttgaaagttgcagcattcaagggggatgattctgttgtgctc +tgcagtgactaccggcagagccgcaatgcggccgcactggttgctggctgtgggctgaaacttaaggtggac +tttagacctattggattgtatgccggtgttgttgtggccccgggtctcgggaccctccctgatgttgttagg +tttgctgggcggctctcagagaaaaactgggggccgggttcggagagggcagaacagctacggctggctgtc +tgtgattttttgcgaaagttaacgaatgtggctcaggtttgtgtggatgttgtttcgcagg-------tcta +tggtgttagccccggcttagtacataacctgattggaatgcttcagactattgctgatggcaaggcacactt +tactgagacaattaaacccgttcttgaccttactagttccattataaaccgggtggaatgaataacatgttc +t----------------tttgctctgtgcatggag---------atgccaccatgcgctctcgggctcttct +gtttctgctcctcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gtcgccgcgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgaccgg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgcatctgacataccagccgccgccggggctggagctcgccctc +ggcagccggcccg---------------cccactcggttccgcttggcgtgaccaatccca----------- +------gcgccccgccgcttcctcccgccgtcgatctgcccca---------gctggggcttcgccgttaac +ggccgtggccccggcccctgacactgccccagttcctgatattgattctcgtggcgccatattacgtcgcca +gtgtaatctatcaacatctccgcttacgtccactattgctactggtactaatcttgtcctgtatgccgctcc +gctgagccccttgctcccgcttcaggatggaactaatactcatattatggccactgaggcttcaaattatgc +ccagtaccgcgttgcccgtgctaccatccggtaccgcccgttagtgccgaatgctgttggcgggtacgctat +ttccatctctttttggccccagacaacaaccactccgacatctgttgatatgaactctatcacctctactga +tgttcgaattcttgtccaacccggtatcgcctctgaactcgtgatccctagtgagcgcctgcactatcgtaa +tcagggttggcgttcggttgagacctctggtgtcgcggaggaggaggctacctctggccttgttatgctttg +catccatggatcacctgtgaattcctataccaatactccttatactggtgcacttggcttgcttgatttcgc +gctcgagctcgagttttgtaatctaacgcctggcaacacgaatacgcgtgtctcccgttattcgagcagtgc +gcgccacaagctacgccgagggcctgatggcactgctgaattaaccaccactgcagccacccgctttatgaa +agaccttcacttta---cagggactaat---ggtgttggtgaggttggtcgtggcatagcgttaaccctgtt +taatcttgctgacacgctgctcggtgggctaccgacagaattgatttcgtcggctggtggacaattgttcta +ttctcgccccgttgtctcagccaatggcgagccgacagtgaaactttatacttcagtcgagaatgctcagca +ggataagggtatagctaccccccacgatattgatcttggtgagtcccgagttgtcatccaggactatgataa +ccaacacgagcaggaccgtcccaccccctctccagccccttctcgccccttctctgtccttcgtgctaatga +cgtgctctggctatc-----------------------------ccttacagccgctgagtacgac------ +cagaccacctatggctcctctaccaaccctatgtatgtctctgacactgtgacatttgt---taatgtagct +actggtgcccagggagtttcccgctctcttgactggtctaaggtcactcttgatgggcgcccacttactact +at-----ccagcagtattctaaaacattctatgtct-tgcctcttcgcggtaagctttccttttgggaggct +ggtaccaccaag--gctggctatccttataactataatactactgctagtgaccagattctaattgagaatg +cggctggccac------cgtgtctgcat-ttcaacttatactactaaccttgg--------------ctccg +gccctgtctctatttc-tgctgtcggtgtcctcgcacctcactctgcgttggccgctctggaggataccgtt +gact---------accccgctcgtg----ctcatacttttgatgatttctgccctgagtgccgtacac---t +cggccttcagggctgtgcatttcagtc--------aactgttgctgagctgcagcgtct------------- +--------taaaatgaaggtgggtaaaactcgggagtattgattta-tt----tt-gctt----------gt +gcct-ccc--------tt------ctttt--ctgt-tt--cttt--------------tatt-t-------c +tcttttct----gcg----------------ttccgcgctccctg---------------------aaaaaa +aaaaaa------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>JQ655733.1/17291/1-7291 |Hepatitis E virus isolate MO, complete genome +---------------------------tgcagaccaacgtatg-------------t-----ggtcgacgc- +---catggaggcccaccagttcataaaggctcctggcgtcactactgctattgag---caggcagctctagc +agcggccaactctgccttggcgaatgctgtggtggttcggcccttcttatcccgcctacagacagagatact +aatcaatctgatgcagccccggcagcttgttttccggcctgaggtcttgtggaatcaccctatccagcgtgt +gatccacaatgagctcgagcagta---ctgccgagctc-gtgccggccgctgccttgaagtgggcgcccacc +cacgttcgattaatgactaccccaatgttttgcatcgttgctttcttaaaccagttggccgtgacgttcagc +ggtggtatactgcccccacccgtggccctgcggcaaactgccgccggtctgccctccgtgggctcccacctg +ttgatcgtacatactgttttgacggcttctctggctgcacctttgccgccgagacaggtattgctctttatt +cactgcatgatctatggcccgctgatgtcgccgaggcgatggcccgccgtgggatgactcggctctatgcag +ctcttcacctc-ccccctgaagtgctactaccccctggcacatatcacactacttcatatcttctgatccat +gatggggaccgtgcagtgattacatatgaaggggattctagtgcggggtacaatcatggtgtgtccattttg +cgggcgtggatccgtaccaccaaggtcaccggcgatcacccgctggtgattgagcgagtccgagcggtgggg +tgccattttgtgctcctccttactgccgctcctgaaccatcgccgatgccttacgtcccgtacccacgctcg +accgaggtttatgtccggtctattttcggcccaggt---------ggctcgccatctctttttccatctgcc +t----------gctctacgaagtcaa-catttcatgccgtccctgtgcacatatgggataggcttatgcttt +ttggtgcgacccttgatgaccaagccttttgctgttccaggctcatgacgtatctccgtggcattagctata +aggtcacggtaggtgccctcgttgccaacgagggctggaatgcctctgaggatgcgttgaccgccgtaatca +ctgcggcttaccttactatctgccatcagaggtacctccgcacgcaggctatttctaaggggatgaaaaggt +tagagcttgaacacgcacagaagtttataacacgcctttacagctggctatttgaaaaatc---------cg +ggcgtgactatatccccggccgccaactgcagttttatgctcagtgccgccggtggttatctgcaggttttc +acctcgatcctcgtgtgctcgtctttgatgaagccgccccctgc---cgctgccggagtttcctccgtaa-- +----agccgctcacaagttttgttgctttatgcggtggctgggtcaaga------ctgcacctgttttcttc +----------------agcccattgaggggagggttggtgagcagggt--------tatgataatgaggcgt +tcgaagggtcggatatcgaccctgctgaggaagccaccgtgagcatctccgggtcctatattgtcactggcc +gtcaattgcagcctttataccaagcgcttggcataccatctgatttagccgcgcgtgctggtcggcttgctg +ctactgttgaagtttcagatgctgacggccgccttacctgcaagaccaccttgggtaataaaactttttcaa +cggtatttactgatggcgctcagctagaggccaacgggcc------------------------ggagcagt +atgttctatcatttgatctgactaaacagactatggctgctggcccgcatagtcttagctacaccttagcat +ctgcgggccttgaagtgcatattgtttct-------gccgggcttgactgtaaagctgtcttcccc---cct +ggtgttgcagccccttccgctcctggggaggtgtctgctttctgctctgctctttacaggtttaaccgctgt +gttcagcggcattcccttattggaggtttgtggtactatcctgagagcctggtcggtttgttcccaccgttt +tcccctggtcatagctgggaatctgccaaccctttttgcggtgagagcaccctttatactcgcacttggtct +gtgtcgggcttttctagctgtttttcccccttcgagcctcgcgccccagagctgccgccttccggt---gac +accgacac----------atctgtagctattgatgc-cccacca---------ttggtttcc-----cctgt +acagactcagccccctgcc----cccagccagg---tgg--------------------cgtccccgccaga +cttgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcgacgatggtgccggccatcgcctg +cctagcgtccctgcg---------------gag-------------------cctccggcgtccgtgcagcc +tgtaatcca--------------------------------------gc---ccgggccccgtcgacg---- +-----------------attgctccatacttaccccgatggttcgaaggtgtatgccggatctctttttgaa +tccgagtgtacatggctggtcaatgcctctaacccaggccaccgccccggcggcggcctctgccatgcattc +taccagcggtttccagagtcct------tcgaccctgctgagtttattatgtccgacgg---gtttgcagcc +tacaccctgacgcctcggcccataatccacgctgttgcccccgattatcgggttgaacataaccctaagcga +cttgaggccgcttatcgggagacatgctcccgtcgcgggacagcagcttatcccttgctcggcgctggtata +tacaaggtccctgtcggattgagctttgacgcctgggaacgtaaccatcgacccggggacgagttgtacttg +accgagccggctatagcc-------------------------------------------------tggtt +tgaggccagccggcctaccct--------------------------------------------------- +------------------------------------------tcctgctttaactattactgaggatacggc +gc------------gcacggctaacctagcactggagttgg------------atgcggccactgaggtcgg +ccgtgcgtgc---gctggctgccgtgttgaacccggcgtggtccattaccagttcacagctggtgtccctgg +ctccggtaaatcccggtcaatccagcagggagatgtggacgtaatagtggtaccaacccgtgagctacgcaa +ttcgtggcgccgccgtggattcgcagcctacacacctcatactgcagcccgtgttacccgaggccgcagagt +tgttattgacgaggccccctcgcttccaccacacttactcctgctgcatatgcagcgggcctcgtcagtcca +tctgcttggcgaccctaatcaaattcctgccattgatttcggacatgccggcctcgttccagcaatccggcc +tgagttggtcccaactaagtggtggcaccttactcataggtgccctgcggatgtttgtgagctgatccgtgg +cgcatacccaaagatccaaactgctagccgtgtcctccgctctttgttttggggggag------ccccctgt +aggccagaagctggtcttcactcaagcggccaaggctgctaaccctggtgcaatcacggttcatgaggcaca +gggcgcgacattcactgagactacaattattgccacggcggatgctcgcgggctaattcagtcctctcgagc +tcatgctattgtggccctgactcgtcacacggagaagtgcgtggtggttgatgctccggggcttctccgtga +ggtaggtatctctgatgctattgttaacaatttc------------------------------ttcctctc +tggtg--gcgagattggccagcaccgcccgtcagttgtaccccgtggcactattggcagcaatgtcgacac- +-----gcttgatgcgtttcccccctcctgccagtttagcgcgtaccaccagctagccgaagagcttggccac +cgacctgcgccgattgctgctgtcttgcccccctgtccagagcttgaacagggcttgccttatatgcctcag +gagttaactacatcggacagtgttctcacctttgaactaacggacattgcgcactgccgtatggcggcgccc +agccagcgtaaggcggttctgtcgacccttgtcggcaggtatggccgccgcacgaagctgtatgaggcagcc +catgcagatgtccgcgggtcccttaatcatttcattcctgagcttggcccaattagcgtcaccacctgcgag +ctctatgaacttgtagaggccatggtagagaagggccaagacggctctgcgatcctggagcttgacctatgt +aatcgtgatgtgtcccggataaccttcttccagaaagactgtaacaaatttacaacaggtgagacgatagcg +catggcaaagtcgggcagggtatatctgcatggagtaaaaccttctgcgctttatttggcccgtggttccgc +gctatcgagaagaagattttggcggcgcttgcgcccaatatcttttatggtgacgcttatgaggatacagtc +ttggccgctgctgttgcaggcgcccccggctgtaag---gtctttgagaatgatttctctgagtttgatagc +acccaaaataacttttcact------------------tgggcttgagtgtataattatggaggagtgcggt +atgccacagtggatggtgcgactctaccaccttgttcgctctgcctgggtcttgcaggccccaaaagagtcc +ctgcgtggcttctggaagaagcactctggcgagcctggcaccctgctgtggaataccgtttggaacatggcg +gttatagcgcactgttatgagttccgtgacctcaaagttgcggcatttaagggggatgactctgttgtgctc +tgtagcgattatcggcagagtcgcaatgcggctgctttaatcgctggatgtgggctgaagcttaaggtggac +tttaggcctattgggctctatgctggtgttgttgtggccccgggtctcgggacccttcccgatgtcgttcgg +tttgccgggcggctttcagagaagaactgggggccgggcttggagagggcggagcagctccggctggccgtc +tgtgactttttgcggaagttgacgaatgtggctcaggtctgtgtggatgttgtttcgcagg-------tcta +tggtgttagccccggtttggtacataacctgatagggatgcttcaaactattgcggatggcaaagcgcactt +tactgagacgatcaaacctgttcttgaccttaccaattctattatatatcgggtggaatgaataacatgttc +t----------------tttgctccttgcatggcg---------atgccaccatgcgctctcgggcttttct +gtttttgctcctcctgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gtcgtcgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgcatctgacattccagccgccgccggggctggagctcgccctc +gacagccggcccg---------------cccactcggctccgcttggcgtgaccaatccca----------- +------gcgccccgccgctcccgcccgtcgtcgatctgcccca---------gccggggcttcgccgttgac +ggctgtagccccggcccctgacactgccccggtccctgatgttgattcgcgcggcgctatattgcgccgtca +gaataatttgtccacatccccacttacatccactattgccactggaactaatctcgtgctatatgctgcccc +gcttagccctctactcccgcttcaagacggtactaacactcatatcatggccactgaggcctcgaattatgc +ccagtaccgtgttgtccgcgccaccatccggtaccgccctctggtgccgaatgctgttggtgggtatgctat +atctatttctttctggccccaaacaacgaccaccccgacgtccgtggatatgaattccatcacttccactga +tgtccgtattcttgttcaacccggtatagcctccgagttggtgattcccagtgagcgcctgcactatcgcaa +tcagggctggcgctcagttgagacctctggtgttgctgaggaggaggctacctccggccttgttatgctctg +cattcatgggtcacctgtgaattcttacaccaatacaccttacaccggtgctcttggcctgctcgactttgc +gcttgagcttgagttccgtaatttgacgcccggcaacacaaatacgcgcgtctctcgttattcgagtagtgc +gcgccataagttgcgccgaggggccgacggcactgctgagctaactactactgctgccacacggtttatgaa +ggatcttcattttg---cagggactaat---ggtgttggtgaggttggccgtgggatagcgcttaccttgtt +taaccttgctgacacacttctcggcgggcttccgacagaattgatttcgtcggctggaggtcaactctttta +ttcccgccccgtcgtctcagccaatggcgagccgacagtgaaactttatacctcagtcgagaatgctcagca +ggataaggggattgctatcccacatgatattgaccttggtgagtcccgagttgttatccaggactatgacaa +ccaacatgagcaagaccgccctaccccctctcctgccccttctcgtcctttttctgtgcttcgtgctaatga +tgtactttggctttc-----------------------------acttacagctgctgagtatgat------ +cagactacctatggttcttctacaaaccctatgtatgtttctgatactgtgacgttcgt---caatgtggcc +accggtgcccagggggtttcgcgctctctggactggtctaaagtcacacttgatgggcgcccactaaccact +at-----tcaacagtattccaagaccttctatgttt-tgcctcttcgcggtaagctctctttttgggaggcg +ggtactactaag--gccggctacccctacaattataataccactgctagtgatcaggtcttgattgagaatg +cagctggccat------cgagtctgcat-ttctacctatactactaatttggg--------------ttctg +ggcctgtttctatttc-tgctgtcggtgtcctcgcacctcattctgcgctggccgctttagaggacacagtt +gact---------accctgcccgtg----ctcatacttttgatgacttctgccctgagtgccgtgcgc---t +cggccttcagggttgtgccttccaatc--------aactgttgctgagttgcagcgtct------------- +--------taaaatgaaggtgggtaaaacccgggagtattgattta-tt----tt-gttt----------gt +gcct-tcc--------tt------ctgcc--ttct-tt-tcttt--------------tatc-t-------t +ctttttct----gcg----------------ctccgcgcctccct---------------------gggaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------aaaaaaaaaaaaaaa--------------- +-aaaaaaaaaaaaaa--------------------------------------------------------- +----------- +>JQ655735.1/17257/1-7257 |Hepatitis E virus isolate W3, complete genome +----------------------------gcagacca-cgtatg-------------t-----ggtcgacgc- +---catggaggcccatcagttcataaaggctcctggcgtcactactgctattgag---caggcagctctagc +agcggccaactccgccttggcgaatgctgtggtggttcggccttttctatcccggctacagacagagatact +tattaatctgatgcagccccggcagcttgtctttcggcctgaggtcttgtggaaccacccaattcagcgtgt +gatccacaatgagctcgaacagta---ctgtcgagctc-gggccggccgctgccttgaagtgggtgcccacc +cacgatccatcaatgacaaccccaacgtcctccaccgctgcttcttgaaacctgttggccgcgacgtccagc +ggtggtatactgcccccactcggggccctgcagcgaactgccgccggtcggccctccgtgggctcccacccg +tcgaccggacgtattgttttgacggcttctccggctgtacgtttgctgctgagacgggggttgcactttatt +cattgcacgatctgtggcctgccgatgttgctgaggctatggcccgccatggcatgacccggttgtatgcag +ccctccacctc-cccccagaagtgctgctccctcccggaacctaccataccacctcataccttctcatccat +gatggcgatcgtgcagtaattacatatgagggggattctagtgctgggtacaatcatgatgtgtccattctc +cgtgcctggatccgcactactaaggtcaccggtgatcacccgctagtgattgagcgggtccgggcagtaggc +tgtcattttgtgctccttctcacagccgcacctgagccgtcgccaatgccctatgttccataccctcgttct +accgaggtctatgttcggtccatcttcggccccggc---------ggctccccatccctctttccatctgcc +t----------gctcgactaaatcta-catttcacgccgtccctgtgcacatatgggacaggcttatgctct +tcggtgcgactctcgacgatcaggccttctgctgttcgaggctaatgacatacctccgtggcattagttata +aagtcacggtcggcgctcttgtcgccaacgagggttggaatgcttccgaagatgcactgactgctgtgatta +ccgccgcttatctcactatttgccatcagagatatctccgcacacaggccatttcgaaaggaatgaagaggc +tggagcttgagcatgcgcaaaagttcataacacgcctttatagctggctgtttgaaaagtc---------tg +gtcgtgattacatccccggtcgtcagttgcagttttatgcccaatgccgtcggtggttatctgccggcttcc +accttgaccctcgtgtgcttgtttttgatgaggcggctccttgc---cgctgtcgtagcttcctccgtag-- +----ggctgctcataaattctgttgcttcatgcggtggctcgggcagga------ctgcacctgcttcctcc +----------------agcctgttgaggggagggtcggcgagcaaggt--------tatgataatgaagcgt +ttgaaggatcggatgtcgaccccgctgaggaggccgttgtgagcatttctggatcttacattgtcactggta +gtcagttacagcccctttatcaggcgcttggtattccttctgaccttgctgcccgagccagtcggcttaccg +ccaccgtcgaagtgacggatgccgatggtcgtcttatctgtgaaaccactataggcaacaagacttttaaaa +cagtttttactgatggtgcccagttggaggctaatgggcc------------------------agagcaat +atgtgctgtcgtttgattcggccaagcagaccatggctgccggcccacatagtcttagttatgccttgacat +ctactggcctcgaggtgcgtgttgtttcc-------gccggactcgactgcaaggctgtttttcca---tct +ggtgtagcgaccccctctgcccctggggaggtgtccgctttttgttcagccttgtataggttcaatcgctgt +gtccagcggcattcccttattgggggtctgtggtactaccctgaggggctaattggcctgtttccgccgttc +tctcccggtcatgcttgggagtccgccaatcctttctgcggggagagcaccctctatacccggacctggtca +gtgtcagggttctctagctgcttctccccgcttgagccttgcgccccgggtttgtcaccgcccgtt---gag +actgacgt----------gcctgttgctattaatgt-tccatcc---------ccaaccatc-----tctgc +attgcctcagcccccagcc----tccgaacagg---cgg--------------------ccccttcactaga +cctag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttgatagcggtgctgttccggcccta +ccggacgctcccgtt---------------gcc-------------------tccccggcgccagtgcagcc +cgtaaccca--------------------------------------cctatccgggccccgccggcg---- +-----------------gttacttcatgcttatcctgatggctcaaaggtgtatgccggctccctttttgag +tctgagtgcacttggctggttaatgcatccaaccctggtcaccgccccggcggtggtctatgccacgcattc +taccagcgtttcccagagtcat------ttgaccccgccgagttcgttatgtctgacgg---ccttgcggct +tatactctcaccccccggcctatcattcatgctgtcgcccccgattaccggatagaacataaccctaaaagg +cttgaggccgcttatcgggagacgtgctctcgccgtgggacggctgcttaccccttgctcggcgccggtata +tacaaagtgcctgttgggttgagctttgacgcctgggaacgtaaccatcgacccggggatgagctgtacctt +actgagccagctatagct-------------------------------------------------tggtt +tgaggctaaccggcccgctct--------------------------------------------------- +------------------------------------------ccccgcccttactattactgaggacacggc +ac------------gcacggcgaatttggcgctagagctgg------------attcagccaccgaggtcgg +ccgggcatgt---gctggctgtcgtgttgagcctggcgtcgttcactaccaattcacggcgggtgtgcctgg +ctccggtaagtcacgttcagttcagcagggtgaggtagatgtggtggtggtgccaactcgtgagctgcgcaa +ttcgtggcggcgccgcgggttcgcagcctacacacctcatactgcggcccgtgtcacccgtggccgcaggat +tgttattgacgaggctccatcgcttccaccgcatttacttctgcttcatatgcagcgagcttcgtcagtcca +ccttcttggtgaccccaaccagatccctgccattgattttgagcatgctggccttgttccggcgatccggcc +cgagcttgtcccaacgaagtggtggcatcttacacacagatgtcctgccgatgtctgcgagctgattcgtgg +cgcatacccaaagatccaaactgctagccgtgtcctccgctctttattctggggtgag------cccccggt +gggccggaagttagtatctacccaggcggcaaaggccgccaaccctggcgcaattacagtccatgaggccca +gggtgctacatttactgaaactactattattgccacagcagatgctcgcgggttagttcagtcctccagggc +ccatgccatcgtggccttgacgcgccacacggagaagtgcgtggttgttgacgcccccgggctccttcgtga +ggtcggcatttccgatgccatcgtcaataatttc------------------------------ttcctctc +tggcg--gccagattggtcaacaccgcccgtcagttatcccacgcggcactgttgacagcaacgttgacac- +-----gcttgatgcatttccaccctcctgccaatttagtgcctatcaccagcttgcggaggagctaggccat +cggccggccccaatcgctgctgtcctgcccccttgcccggagcttgagcaaggtcttctttatatgcctcag +gaattggctacgtctgatagtgtgcttacgtttgaactgacagacatagtgcactgccgtatggcggcaccc +agccagcgtaaagctgtcctgtccacccttgtcggtaggtacggccgccgtacgaagctgtacgaggccgct +catacggatgtccgtagttccctaaaccactttatccctgagcttagtcctattagtgtcactacttgtgag +ctttatgagcttgtagaggctatggtggagaagggccaggatggctctgcagtcctagagcttgatttgtgc +agccgtgatgtgtctcgcataacattctttcagaaggattgtaataaatttacaacaggcgagacgatagca +cacggcaaagttgggcaggggatatccgcgtggagcaagaccttttgtgccctgttcggaccatggttccgc +gctattgagaaggagatccttgcggcacttgcgcctaacgtgttctacggtgacgcatatgaagatacagtt +ttggctgccgctgtggctggggctcctggctgcaag---gtctttgagaatgacttctctgagtttgatagt +actcaaaataatttttcact------------------tgggctggagtgtataattatggaggagtgtggc +atgccgcagtggatgatccgactctaccaccttgttcgctctgcctgggtcttgcaggccccaaaagagtcc +ctgcgtggcttctggaagaagcactctggcgagcctggcaccctgctgtggaataccgtttggaacatggcg +gttatagcgcactgttatgagttccgtgacctcaaagttgcggcatttaagggggatgactctgttgtgctc +tgtagcgattatcggcagagtcgcaatgcggctgctttaatcgctggatgtgggctgaagcttaaggtggac +tttaggcctattgggctctatgctggtgttgttgtggccccgggtctcgggacccttcctgatgtcgttcgg +tttgccgggcggctttcagagaagaactgggggccgggcttggagagggcggagcagctccggccggccgtc +tgtgactttttgcggaagttgacgaatgtggctcaggtctgtgtggatgttgtttcgcagg-------tcta +tggtgttagccccggtttggtacataacctgatagggatgcttcaaactattgcggatggcaaagcgcactt +tactgagacgatcaaacctgttcttgaccttaccaattctattatatatcgggtggaatgaataacatgttc +t----------------tttgctctgtgcatggag---------atgccaccatgcgctctcgggctcttct +gtttctgttcgtcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gtcgtcgcgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgcatctgacatatcaaccgccgccggggctggagctcgccctc +gacaaccgacccg---------------cccactcggttccgctcggcgtgaccaatccca----------- +------gcgccccgccgtttctgcccgccgtcgatctgcccca---------gctggggcttcgccgttaac +ggctgtggctccggcccctgacaccgccccagttcctgatgttgattctcgtggcgccatactacgtcgcca +gtataatttatcaacatccccactcacgtccactatcgctactggtactaatcttgttctgtatgccgcccc +gctgagccctttgctcccgcttcaggatggaactaatactcatattatggccactgaggcttcaaattatgc +ccagtatcgcgttgcccgtgccaccatccggtaccgcccgttagtgccgaatgctgtcggcgggtacgctat +ttctatctctttctggccccagacaacaaccactccgacatctgttgatatgaactctatcacctccactga +tgttcgaattcttgtccaacccggtatcgcctctgaacttgtgatccctagtgagcgcctgcattatcgtaa +tcaaggctggcgttcggttgagacctctggtgtcgcggaggaagaggcgacctctggtcttgttatgctttg +cattcacggttcgcctgtgaactcctataccaatacgccttatactggtgcacttggcttgcttgatttcgc +gctcgagctcgagtttcgtaatctaacacctggcaatacgaacactcgtgtctcccgttattctagcagtgc +acgccacaagctacgccgcgggcctgatggcactgctgaattaactactactgctgccacccgctttatgaa +agaccttcacttta---cagggactagt---ggtgttggtgaggttggtcgtggcatagcgttaaccctgtt +taaccttgctgatacgcttctcggtgggctaccgacagaattgatttcgtcggctggtggacaattgtttta +ctctcgccccgtcgtctcagccaatggcgagccgacagtgaaactttacacttcagtcgagaatgcccagca +ggataagggtatagctatcccccacgatattgatcttggtgagtcccgagttgtcatccaggactatgataa +ccaacacgagcaggaccgccccactccttctccggccccctctcgccccttctctgtccttcgtgctaatga +cgtgctctggctatc-----------------------------tcttacggccgctgagtatgac------ +cagactacctatggctcctctaccaatcctatgtatgtttctgacactgtgacatttgt---taatgtagct +actggtgcccagggagtttcccgctctcttgactggtccaaagtcactcttgatggacgcccactcactact +at-----ccagcagtattctaagacattctatgttt-tacctctccgtggtaaactttccttctgggaggct +ggtactaccaag--gctggctacccttataattataatactactgctagtgaccagattttaatagagaatg +cggctggtcac------cgtgtctgcat-ttcaacttatactactaatcttgg--------------ctccg +gccctgtttctatttc-tgctgtcggtgtcctcgcacctcactctgcgctggccgctctggaggataccgtc +gact---------atccagctcgtg----ctcatacttttgatgatttctgccctgagtgccgtacac---t +cggtcttcagggttgtgcatttcagtc--------aactgttgctgagctgcagcgtct------------- +--------taaaatgaaggtgggtaaaactcgggagtattgattta-tt----ct-gctt----------gt +gcct-ccc--------tt------ctgct--ttgt-tt--cttt--------------tatt-t-------c +tcttttct----gcg----------------ttccgcgctccctg---------------------aaaaaa +aaaaaaa---------------aaaaa--------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>JQ655736.1/17261/1-7261 |Hepatitis E virus isolate W25, complete genome +---------------------------ggcagacca-cgtatg-------------t-----ggtcgacgc- +---catggaggcccatcagtttataaaggctcctggcgtcactactgctattgag---caggcagctctagc +agcggccaactccgccttggcgaatgctgtggtggtacggcctttcctttcccggcttcagacagagatact +cataaacttgatgcagccccggcagcttgttttccggcctgaggtcctgtggaaccacccaatccagcgtgt +gatccacaatgagcttgagcagta---ctgccgagccc-gggccggacgctgtcttgaggtgggcgctcacc +cgcgttctattaatgacaaccctaatgtcctgcaccgctgctttcttaaacctgtaggccgcgatgttcagc +ggtggtataccgctcctacccgtggccctgcggcgaattgccggcggtctgctctccgcgggctcccgcctg +tcgaccggacttactgttttgatggtttctctggctgtacattcgccgccgagacgggggttgcactctatt +cactgcacgacctttggcctgctgatgttgcggaggcaatggcccgccacggcatgacccggctgtatgctg +ccctccacctc-cccccggaggtattgctcccccctggcacttaccataccacctcatacctcctaattcat +gatggggatcgtgcagtgattacatatgagggggattccagtgccgggtacaatcatgatgtgtccatctta +cgtgcttggatccgtacaaccaaggtcaccggtgaccacccgctggtgattgagcgggttcgggctgtggga +tgtcattttgtgctcctcctcacagctgcacctgagccgtcaccgatgccttacgttccatacccccgttcg +acagaggtttatgtccgttctatttttggccccggt---------ggttcaccatccctctttccatctgcc +t----------gctcgaccaagtcaa-catttcatgccgtccctgtgcatatatgggacaggctcatgctct +ttggagcgaccctcgatgaccaggctttctgctgctccaggcttatgacatacctccgcggtattagttata +aggtcacggtcggtgcccttgttgccaatgaaggttggaacgcttccgaagatgcgctgactgctgtgatta +ctgcagcctatttaaccatctgtcatcagagataccttcgcacgcaggctatctctaaagggatgaagaggc +tggagcttgagcatgcacaaaagttcataacacgcctttatagttggttgtttgagaagtc---------tg +ggcgtgactatattcctggccgccagttgcagttctatgcccagtgccgccggtggttatctgctggcttcc +accttgaccctcgggtacttgtatttgatgaggcagccccttgt---cgttgtcggagttttctccgcaa-- +----ggctgctcacaagttctgctgctttatgcggtggcttggccagga------ttgcacctgttttctcc +----------------agcccattgaggggagagtcggtgagcagggt--------tatgacaatgaggcat +ttgagggatcggacgttgaccccgctgaagaagccgccgttagtatctctgggtcatatatcgttaccggta +gccagttgcagcttctctatcaagcacttggcataccttccgaccttgccgctcgtgcaagccgactcactg +ctaccgttgaggtctctgacactgatggccgtcttacctgtaagaccaccatgggtaacaagaccttttcaa +cagtccttgctgatggcacccagctggaggccaacgggcc------------------------agaacaat +atgttttgtcgtttgacccggtgaaacaggctatggcagcaggtccgcatagtcttagttacaccctaacac +ctgcaggcctcgaggtgtgtgtagtctcg-------gccgggctcgattgcaaggccgtctttccg---ccc +ggcgtagcggccccctctgctgctggggaggtgtctgctttctgctcggctttgtacaggtttaaccgctgt +gtccaacggcactctcttattggaggtctatggtatcaccccgaggggcttgttggtctgttcccaccgttc +tcccccggtcatagctgggagtctgctaatcctttctgtggtgaaagcaccctttacacccggacttggtcg +gtttcgggcttctctagctgtttctcaccactcgaaccttgcgccccgaacgtgctaccttctgcg---gag +gctaatac----------acctgtggtt---gatgt-cttacct---------tcggagatt-----acgga +gcaggcccagcccccggct----tctaagccgg---cgg--------------------cacctttatccga +ctcag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcgataacagtgttggtcccatccca +ttcagtgcccccatc---------------gca-------------------cctcctgtgccagcgttgcc +tgtaaccca--------------------------------------cctatctgggccccgccgacg---- +-----------------gttgcttcatacttaccctgacggctcgaaagtgtatgccggctctctttttgag +tctgagtgcacttggttggtcaatgcatctaaccctggtcaccgccctggcggcggtctctgtcacgccttc +tatcagcggttcccagagtcgt------ttgaccccgccgagtttgttatgtcaaatgg---gcttgcagct +tacaccttaaccccccggcctattattcatgctgttgctcctgactatcgggtcgaacataaccctaagcgg +cttgaggccgcctatcgggagacatgctctcgccgggggacagctgcctaccccttgctcggtgctggtata +tatagggtccccgttgggttgagttttgatgcttgggagcgtaaccatcgacctggggatgaactgtatctg +actgagccagccatagct-------------------------------------------------tggtt +tgaggctaatcggcccaccct--------------------------------------------------- +------------------------------------------ccctgccttgactataactgaggatacagc +cc------------gtacagcgaatttggcgcttgagctag------------acgcagccacagaggtggg +ccgtgcgtgt---gttggttgtcgtgtggagcccggcgtgatccactatcaattcacagcaggtgttcctgg +ctccgggaagtctaggtcgatccaacagggcgatgtggatgtgatagtggtgccgacccgcgagctgcgtaa +ttcatggcgtcgccgcgggtttgcagcctacacaccccacacggcagcccgtgtgacccgtggccgccgggt +cgtcattgatgaggccccttcacttccaccgcatctgcttctgttacacatgcagcgggcctcatcggttca +cctcctcggtgaccctaatcaaattcctgcctttgattttgagcacgccggccttatgccggcaattcgacc +cgagctggtccctacaaagtggtggcatcttacccatagatgcccggcggatgtctgtgagctaatccgcgg +tgcatacccgaagatccagactgctagccgcgtcctccgctctttgttttggggggaa------ccccctgt +gggccagaagctggtatttactcaggcggcgaaggctgcaaaccccggcgcgattaccgtccacgaagccca +gggcgcaacatttactgaggctacaattatcgccacggcagacgctcgtgggctgatccagtcttctagggc +ccacgcgattgtggccctgacccgccacacggagaagtgcgtggtggttgacgccccggggctcctccgtga +ggtaggcatttctgatgccattgttaataacttt------------------------------ttcctttc +tggcg--gtcagatcggccagcaccgtccatcggttataccgcgtggcactattgataataatgttgatac- +-----acttgatgctttcccgccctcttgccagtttagtgcttaccatcagttggccgaggagctcggccac +cggcccgctccaattgctgccgtcctgcccccctgtccggagcttgaacagggtctactttatatgcctcaa +gaattgacaacatccgacagcgtgctcacttttgagctcacggacatagtgcattgtcgcatggcagcgccc +agtcagcgcaaagcggtcttgtcaactcttgttggcaggtacggccggcgcaccaaactgtacgaggccgca +cacacagatgtccgcgggtccctgaatcactttattcctgaacttggccccattaatgttaccacctgtgag +ctttacgagcttgtggaggctatggtcgagaaaggccaggatggctctgcggttctggagcttgatttatgc +agccgtgatgtgtctcggataacattcttccagaaggattgcaataaattcacaacaggtgaaacgatagcg +catggtaaagtcgggcaggggatatccgcatggagcaagaccttctgcgctttgtttggcccgtggttccgc +gctattgagaaagaaattctggcggcactagcacctaatgtcttttatggtgatgcgtatgaggacacagtt +ctggctgccgctgttgccggtgcccctggttgtaag---gtttttgagaatgacttttccgagtttgatagc +actcaaaacaatttctcact------------------cgggttagagtgtataatcatggaggagtgtggc +atgccgcagtggatgatccgactctatcatctcgttcgctctgcctgggtcctgcaggccccgaaggaatct +ctgcgaggcttttggaagaaacactctggtgagcccggtaccctactatggaacactgtttggaacatggct +gttatagcacactgttatgagttccgcgacctcaaggtcgcagcatttaagggggatgactctgttgtgctt +tgtagtgattatcggcagaaccgtgatgcagctgccttgattgctggttgtgggttgaagcttaaagtggat +tttaggcctattgggttgtatgctggtgtggttgtggccccgggtcttggtactttgcccgatgttgttagg +tttgctggccggctttcggaaaagaactgggggtcaggcccggagagggcggagcagctccgactggccgtt +tgtgattttctgcgaaagttaacgaatgtggctcaggtctgtgtggatgttgtttcgcagg-------ttta +cggcgttagtcctggtttggtacataacctgattgggatgcttcagactatcgctgatggcaaggcacattt +tgctgagacagttaaacccgttcttgaccttaccagctcgattatataccgggtggaatgaataacatgttc +t----------------tttgctctgtgcatggag---------atgccaccatgcgctctcgggctcttct +gtttctgctcctcgtgcttctgcctatgttgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gtcgccgcgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgcatctgacattccagccgccaccggggctggagctcgctctc +gacagccagcccg---------------cccgcttggctccgcttggcgtgaccagtccca----------- +------gcgccccgccgcttccacccgtcgtcgacctgcccca---------gctggggcttcgccgttgac +ggctgtggccccggctcctgacactgcacctgtccctgatgttgattctcgcggcgccattttacgccgcca +gtataatctgtccacatccccgcttacatctactattgctactggcactaatcttgtgctatatgccgcccc +acttagtcctctgctaccgcttcaggacggcactaatacccacattatggccactgaagcatctaattatgc +ccagtatcgtgttgttcgcgccaccatccgatatcgtcccttggtgccgaatgccgttggtgggtatgctat +atccatctccttctggccccagactacgaccaccccaacgtccgttgttatgaattcaatcacctccacaga +tgttcgtattcttgtccaacctggtatagcttctgagctggtaatccctagtgaacgcttgcactatcgaaa +tcagggatggcgttcggttgagacttctggtgtcgttgaggaagaagcgacctctggccttgttatgctctg +cattcatggatcacctgtgaattcctatactaatacaccttataccggtgccctcggcttacttgactttgc +actcgagctcgagtttcgcaatttgacacctggtaacaccaatacgcgcgtttctcgttattcgagtagcgc +gcgtcacaagctgcgccgagggcctgatggtactgctgagttgactactactgccgccacacgttttatgaa +agacctccatttta---cggggactaat---ggtgttggtgaggtcggtcgtggtatagcgttaactttgtt +taatcttgctgatacgcttctcggtgggcttccgacagaattgatttcgtcggctgggggtcagttgttcta +ctcccgccccgttgtctcggccaatggcgagccgacagtaaaactttacacctcagtcgagaacgcacagca +ggacaagggtatagctattccacatgatattgaccttggtgagtcccgtgtggttattcaggattatgacaa +ccagcatgagcaagatcgccccaccccctcccctgctccctcccgtccattctctgttcttcgtgctaatga +tgtgctttggctttc-----------------------------actcactgctgctgagtatgat------ +caaacgacttatggttcttctactaatcctatgtatgtttctgatactattacatttgt---caacgtggcg +actggtgcccagggggtttcgcgctctctggactggtctaaggttactcttgacggtcgcccgctcactacc +at-----ccagcagtattctaagactttctacgtct-tgcccctccgtggtaaactctccttttgggaggct +ggtactactaaa--gctggctacccttataattataacaccactgctagtgaccagattctgattgagaatg +cagctggccac------cgagtctgcat-ctctacctacactactaatttggg--------------ctctg +ggcccgtgtctatttc-tgctgttggtgttctcgcccctcattctgcgctggctgctttggaggataccgct +gact---------accctgctcgcg----cccatacttttgatgatttttgccctgagtgccgttcac---t +cggcctccagggttgtgctttccaatc--------tactgttgctgagctgcagcgtct------------- +--------taagatgaaggtgggtaaaacccgggagtactgattta-tt----ct-gttt----------gt +gccc-ccc--------tt------ctgct--atgt-tt-tcttt--------------aatt-t-------c +ttttttct----gcg----------------ttccgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>JN837481.1/17251/1-7251 |Hepatitis E virus isolate USC031008, complete genome +----------------------------gcagacca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +cgcggccaactccgccttggcgaatgctgtggtggttcggccgtttttatctcgtgtacaaaccgagattct +tattaatttgatgcaaccccggcagttggttttccgccctgaggtgctttggaaccatcccatccagcgggt +catacataatgaattggagcagta---ctgccgggccc-gggctggtcgctgtttggaggttggagcccacc +cgaggtctatcaatgacaatcctaatgtcttgcatcggtgtttccttagaccggttggccgagatgttcagc +gctggtattctgcccctacccgtggccctgcggccaattgtcgccgctccgcgctgcgcggcctcccccctg +ttgaccgcacctattgctttgatggattctcccgttgtgcttttgctgcagagaccggtgtggccctttact +ctttgcatgatctttggccagctgatgttgcggaggctatggcccgtcatgggatgacacgcttatacgccg +cactgcatctt-ccccccgaggtgctgctaccacccggcacctaccacacaacctcgtatctcttgatccac +gacggcaaccgcgctgttgtaacttacgagggcgacactagtgcgggctataatcatgatgtctccatactt +cgtgcatggatccgtaccaccaaaatagttggtgaccacccactggtcatagagcgtgtgcgggccattggg +tgtcattttgtgctgctgctcaccgcagcccctgaaccgtcacctatgccttatgtcccgtaccctcgttca +acggaggtgtatgtccggtctatatttggccctggc---------ggctccccatccctgtttccatcagcc +t----------gctctactagatcta-cctttcatgctgtcccggttcacatctgggatcggctcatgctct +ttggtgccaccctggacgatcaggcgttttgctgttcacggcttatgacttacctccgtggcattagttata +aggtcactgtcggtgcgcttgtcgccaatgaggggtggaacgcctctgaagacgctcttactgcagtgatca +ctgcggcctatctgactatctgccatcagcgttaccttcgtactcaggcgatttccaagggcatgcgccggt +tggaggttgagcacgctcagaaatttattacaagactctacagttggttatttgaaaagtc---------cg +gccgtgactacatccccggccgccagcttcagttttatgcacagtgccgacggtggctttctgcaggcttcc +accttgaccccagggtgcttgtttttgatgagtcagtgccatgc---cgttgcaggacgttcttgaagaa-- +----ggtcgcgggtaaattctgctgttttatgcggtggttagggcagga------atgtacctgcttcttgg +----------------aaccggctgagggtttagttggtgatcaaggc--------catgacaacgaggcct +atgagggttctgaggtcgatccggctgagcctgcacatcttgatgtctcggggacttatgccgtccacgggc +accagcttgaggccctctatagggcacttaatgtcccacatgatattgccgctcgagcttctcgactaacgg +ctactgttgaacttgttgcaagcccggatcgcttagagtgccgcactgtgcttggtaataagaccttccgga +cgacggtggttgatggcgcccatcttgaagcgaatggtcc------------------------tgaggagt +atgtcctgtcatttgacgcctcccgtcagtctatgggggccgggtcacacagcctcacctatgagctcaccc +ctgccggtttgcaggtcaagatttcatct-------aatggtctggattgtactgccacattcccc---cct +ggtggcgcccctagcgccgcaccgggggaagtggcagccttttgcagtgctctctatagatacaataggttt +acccagcggcattcgctgacaggcgggctatggttacaccctgaggggttgctgggtatcttccccccattc +tcccctgggcatatttgggagtctgctaaccccttttgcggtgagggaactttgtatacccgaacctggtca +acttctggtttttctagtgatttttccccccctgaggcggccgcttttgcttcggctgctgcccc----ggg +gttgcctc---accctactccacctgttagcgatat-----------------ccgggtgtt---------- +---------accaccgccc----tcagaggaat--------------ctcatgttgatgtggcatctgtacc +ctctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttcctgagcctgctggattacccagc +cccattgtgcttacc----------------------cccccccccccccctcctcctgtgcgtaagccacc +aacaccccc--------------------------------------gcctacccgcactcgccgtc----- +-------------------tcctctacacctactccgacggcgctaaggtgtatgcggggtcactgtttgaa +tcaggctgtgactggctagttaatgcctcaaacccgggccaccgcccagggggtggcctctgccatgctttt +tatcaacgtttcccagaagctt------tctattcgactgaattcattatgcgcgaggg---ccttgcagca +tacaccttaaccccgcgccctatcatccatgcagtggctcccgactatagggttgagcaaaacccgaagagg +cttgaggcggcgtaccgggaaacttgttcccgtcgtggcaccgctgcctacccacttttgggttcgggtata +taccaggtccctgttagcctcagttttgacgcctgggagcgtaatcaccgccccggcgatgagctttacttg +acagagcccgccgcagcc-------------------------------------------------tggtt +cgaggctaataagccagcgca--------------------------------------------------- +------------------------------------------gccggcgcttactataactgaggacacggc +cc------------gtacggccaacctggcattagagatcg------------atgccgctacagaggttgg +ccgcgcttgt---gccggctgcaccatcagccctggggttgtgcactaccagtttactgccggggtcccggg +ctcgggcaagtctaagtccatacaacagggagatgtcgatgtggtggttgtgcccacccgggagctccgtaa +cagctggcgtcgccggggttttgcggcctttacacctcacacggcggcccgtgttactatcggccgccgcgt +tgtgattgacgaggcaccatctctcccaccgcacctgctgctgttgcacatgcagcgggcctcctcggtcca +tctccttggtgacccaaaccagatccctgctattgattttgagcatgccggcctggttcctgcgatccgccc +cgagcttgcgccaacgagctggtggcacgtcacacaccgttgtccagccgatgtgtgcgagctcatacgtgg +agcttaccctaaaatccagaccacgagccgtgtgctacggtccctgttttggaatgaa------ccggctat +tggccaaaagctggtttttacgcaggctgctaaggctgctaaccctggtgcgattacagttcacgaggctca +gggtgctaccttcacggagaccacaattatagccacggccgacgctagaggccttattcagtcatctcgggc +ccatgctatagttgcacttacccgccatactgagaagtgtgtcattttggatgctcccggcttgttgcgtga +ggtcggcatttcggatgtgattgttaataacttt------------------------------tttcttgc +cggtg--gggaggttggccaccaccgcccttctgtgatacctcgcggtaaccctgatcagaaccttgggac- +-----tctacaggccttcccgccgtcatgtcagattagtgcttaccatcagctggctgaggaactaggccat +cgtccggcccctgtcgccgccgttttgcctccttgccctgagcttgagcagggcctgctctacatgccacaa +gagcttactgtgtctgacagtgtgcttgtttttgagcttacagatatagtccactgccgcatggccgcccca +agccagcgaaaggctgttctctcaacgcttgtggggaggtacggtcgtaggacgaaattatatgaggcggca +cattcagatgttcgtgagtccctagcgaggtttatccccaccatcgggcctgtccgagccaccacatgtgag +ctgtacgagctggttgaagccatggtagagaagggtcaggacggctctgccgtcctagagctcgacctttgt +aatcgtgacgtctcgcgcatcacatttttccaaaaggactgcaataagtttacaactggtgaaactatcgcg +catggcaaggttggccagggtatatctgcctggagtaagaccttttgcgccctgtttggaccgtggtttcgc +gccattgagaaggaaatattggccctgctcccgcctaatatcttttatggcgatgcctatgaggagtcagtg +tttgctgccgctgtgtctggggcagggtcatgtatg---gtatttgaaaatgacttttcagagtttgacagt +acccagaataatttctctct------------------cggccttgagtgtgtgatcatggaggagtgtggc +atgccccaatggttaattaggttgtatcatctggttcggtcagcctgggttttgcaggcgccgaaggagtct +cttaaaggcttttggaaaaagcactctggtgagcctggtacccttctctggaacaccgtctggaacatggcg +attatagcacattgctatgagttccgtgacttccgtgttgccgccttcaagggtgacgattcggtggttctc +tgtagtgactaccgacagagccacaacgcggctgccttaattgcaggctgtgggctcaaattgaaggttgat +tatcgccctatcgggctgtatgctggagtggtggtggcccccggtttggggacactgcccgatgtggtgcgt +tttgctggtcggttatctgagaagaactggggccccggcccggagcgtgctgagcagctgcgtcttgctgtt +tgtgatttccttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggagttagccccgggctggtacataaccttattggcatgctgcagaccattgctgatggcaaggcccactt +tacagagagcattaaacctgtgcttgaccttacaaattccatcatacaacgggtggaatgaataacatgtc- +t----------------tttgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gttgttgctcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgccgatgtcgtttcacaacccggggctggaactcgctctc +gacagccaccccg---------------cccccttggttccgcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgctgtgtcaccggcccctgatacagcccctgtacctgatgttgactcacgtggtgctattctgcgccggca +gtataatttgtccacgtccccgcttacgtcatctgtcgcttcgggtaccaatctggttctctatgctgcccc +gctgaatcccctcctgcctcttcaggatggcaccaatactcatattatggctactgaggcatctaattatgc +tcagtatcgggttgttcgagctacgatccgttaccgcccgctggtgccgaatgccgttggtggttatgctat +ttccatttctttctggcctcaaactacaactacccccacctctgttgacatgaattctattacttccactga +tgttaggatcctggttcagcccggtattgcctccgagctagtcatccctagtgaacgccttcattaccgcaa +tcaaggctggcgctctgttgagaccacgggtgtggctgaggaggaggctacttccggtttggtgatgctttg +cattcatggctctcctgtgaattcctatactaatacaccttatactggtgcgctggggcttcttgattttgc +actagagcttgaatttaggaatctgacacccgggaacactaacacccgtgtttcccggtataccagcacagc +ccgccaccggctgcgccgcggtgctgatgggactgctgagcttactaccacagcagccacacgcttcatgaa +ggacttgcatttta---ctggcacgaat---ggcgtcggtgaggtgggtcgtggtatcgccctgacattgtt +caatctcgctgatacgcttctcggcggtttaccgacagaattgatttcgtcggctgggggtcaactgttcta +ctcccgcccggttgtctcagccaatggcgagccaacagtaaagttatatacatctgttgagaatgcgcagca +agacaagggcattaccatcccacatgatatagatctgggtgactcccgtgtggttatccaggactatgataa +ccagcacgagcaagaccgacctactccgtcgcccgccccctcccgccctttctcagtgcttcgtgccaatga +tgttctgtggctttc-----------------------------cctcactgccgctgagtacgat------ +cagactacgtatgggtcgtccaccaaccccatgtacgtctctgatacagttacgcttgt---taatgtggcc +actggcgctcaggctgttgcccgctctcttgattggtctaaagttaccctggatggccgcccccttactacc +at-----tcagcagtattctaagacattttatgttc-tcccgctccgcggcaagttgtccttttgggaggct +ggtacgactaag--gccggctacccgtacaattataatactaccgctagtgaccaaattctgattgagaacg +cggccggccac------cgtgtcgctat-ttccacctataccactagcttggg--------------tgccg +gccctacctcgatctc-tgcggtcggtgtactggctccacactctgctctcgccgttcttgaggatactatt +gact---------accctgcccgtg----ctcatacttttgatgatttttgcccggagtgccgtaccc---t +tggtctgcagggttgtgcatttcagtc--------tactattgctgagcttcagcgctt------------- +--------aaaaatgaaggtaggcaaaacccgggagtcttaattaa-tt----c--c--t-ttt------gt +gccc-cct--------tc-gtag-tttcctctgc--tt--------------------tatt-t-------c +ttatttct----gc----------------ctttcgcgctccctg---------------------aaaaaa +aaaaaa------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>JN906976.1/17317/1-7317 |Hepatitis E virus strain FRSHEVB3f, complete genome +-----------------------gcag-----acca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccctggcgaatgctgtggtggtccggccgtttttatcccgtgttcaaactgatatcct +tattaatttgatgcaacctcgacagcttgtgttccggcctgaagtcctctggaatcatccgatccagcgagt +catacataatgagctggagcaata---ctgccgagccc-gcgctggccgttgtcttgaagtgggcgcccacc +caagatctattaatgataaccccaacgttctgcaccggtgcttcctccgcccggttggaagagacgtccagc +gctggtattccgcccccactcgtggtccagcggctaattgtcgccgttctgcgctacgcggcttgccccctg +tcgaccgcacatattgcttcgatgggttctcccgctgcgcctttgccgctgagaccgggatcgctttatact +cactgcatgacctttggccttcggatgtcgcggaggctatggctcgccacgggatgacgcgtttgtatgctg +ccctccaccta-ccccctgaagttctgttaccacctggaacttaccacacaacctcctatcttctgattcac +gacggcaatcgtgccgtcgtgacttatgagggggatactagtgcgggttataaccacgatgtgtctattctt +cgtgcatggattcgcaccacaaaaatagttggtgatcacccgctggtaatagagagggtccgcgccattggc +tgccattttgtcttactccttactgcagcccccgagccgtccccaatgccttatgttccgtaccctcgttca +acagaggtgtacgttagatctatatttggtcctggt---------gggtcgccttctcttttcccatcagcc +t----------gctccaccaagtcta-cattccatgccgtcccggtccatatctgggaccggcttatgcttt +ttggtgccaccttagatgaccaggccttttgctgctcgcggcttatgacctacctccgcggaattagttata +aagtgaccgttggcgcacttgtcgccaacgaaggctggaatgcctcggaggatgcgctaaccgctgtgatta +ctgcagcgtatttgactatttgccatcagcgctacctacgaacacaggccatttctaaaggcatgcgtcggc +tagaggttgagcacgcccaaaaatttatcacaaggttatatagctggttgtttgaaaagtc---------ag +gccgcgattacatccccggtcgccagctccaattttatgcccagtgccgccgctggctctcggctggcttcc +accttgaccctagagttcttgtctttgatgaggcggtcccctgc---cgatgccggagcttcctaaagaa-- +----ggtcgccggaaaattctgttgcttcatgaagtggttggggcagga------gtgcacttgttttttgg +----------------aaccggcggaaggcctggttggtgactgtggc--------catgataacgaggcct +atgaggggtctgaggtggaccccgctgagcctgctcaccttgatgtctctgggacttatgcggtccacggcc +gtcaacttgaggctctatatagagcgcttaatatcccagatgacattgcagctcgtgcgtcacgtctaacgg +ctactgtggagcttgccgccagtccaggcagactcgaatgccgtacggtgcttgggaataagattttccgta +catcaataactgatggtgcccatctcgaggccaacggtcc------------------------tgagcagt +acgccctgacatttgatgattctcgccaagcgatgggggctgggccccacagcctcacgtatgaacttgtcc +ccgctggtctgcaggttaaaatatcttct-------aatggcctggactgtaccgccatattccct---cct +ggtggggcgccgagcgctgcaccaggcgaagtggcggctttctgtagcgccctatacaggtacaataggttc +acccagcgccattcgctgactggcgggctgtggctgcaccccgaggggctccttggcctgtttccccctttc +tccccggggcatctttgggagtctgcaaaccccttttgcggtgagagcacactttatacacgaacttggtcc +acatctggtttttctagcgacttctccccacccgaggcggcttatgccgccccagtccctgacat----ggg +gttaacctcgggtgccccctcccccgctagcgatat-----------------ctgggtgtt---------- +---------tccaccgccc----tctgaggggt--------------cggcgatcatttcgccacccataac +cccggtcggtaagccaactaa---------------------------------------tccgcc------ +------------------------------------------------------------------------ +-tggtcatac-------------------------------------------------------------- +-------------tacacct----aggccacccgcccgtgagccgtccacaccatcaccggccctaaccccg +g---------------------------------------------ctagtaagccagctaatccgcctagc +cttaccgcacctagg-------------------------------------ccccccgtccgcgagccgcc +cacaccgcc--------------------------------------atcggctcgcactcgccggc----- +-------------------tcctttatacatatcctgatggggccaaggtgtatgcaggctctctgtttgag +tcagattgttactggctggttaatgcatctaaccctggccaccgtcctggtggtggtctctgtcatgcattt +taccagcgctttccagagtcgt------ttcatccgaccgattttgttatgcgtgaggg---tctcgccgca +tatactttgagcccgcgtccgatcatccatgctgtggcccccgactatagggttgagcagaaccccaagagg +ctggaggcggcatatcgtgagacctgctcccgcctcggcacagctgcctacccactactggggtcagggatt +taccaggtccccgtaggtctaagctttgacgcctgggagcgtaatcatcgcccaggcgatgaactttatctt +actgagccggctgccgcc-------------------------------------------------tggtt +cgaggctaataagcctaccca--------------------------------------------------- +------------------------------------------gccagccctaacaattactgaggacaccgc +cc------------gcacagccaaccttgcgcttgagatcg------------actccgctactgaggttgg +tcgcgcctgc---gccggttgtactattaaccccgggattgtccactaccagttcaccgccggggtccctgg +ctccgggaagtctaggtccatacagcagggggatgttgatgttgtggtcgtgccaacccgcgagcttcgcaa +cagttggcggcgccgcggctttgccgcttttacacctcacacagcggctcgtgttactgccggccggcgcgt +ggtgatagatgaagcaccttcgctcccaccgcacctgctgttgctccatatgcagcgagcctcatcagtcca +tcttcttggcgaccccaatcagatccctgccattgactttgagcacgccggtttggtccctgcgattcgccc +tgagctagcccctactagttggtggcatgtcacccaccgttgccccgccgatgtatgtgagctcatacgcgg +ggcctacccaaaaattcagacaaccagccgtgtgttgagatctctattttggaatgag------cctgcgat +aggtcagaggctggtttttacgcaggcagccaaggccgccaatcccggcgcaattaccgttcacgaggccca +gggggccacgtttactgagactactatcatagccacggccgacgctagaggtcttattcaatcttcccgcgc +acatgccatcgttgcacttactcgccatacagaaaagtgcgttattctcgacgctcctggcctattgcgtga +ggttggcatttctgatataattgtaaataacttt------------------------------ttccttgc +tggtg--gtgaagtgggccaccatcgcccttctaccatcccccgcggcaacccagaccagaacttagacac- +-----cctccaagcgttccctccgtcctgccaaatcagcgcttaccaccagttggctgaggagctgggccac +cggccggccccagtggccgccgtcctgcccccctgccctgagcttgagcaggggttactctacatgccgcag +gagcttacggtgtccgatagtgtcttaatttttgaactcacggacatagttcactgtcgtatggccgcccct +agtcaacgtaaggcggttctctccacgcttgtcggcaggtacggtcgccgaacgaagctgtatgaagcggcc +cactctgatgtccgcgagtctttagggaggtttatccctactatcggaccggtccaggccaccacatgtgag +ctatatgagctggttgaggccatggttgagaagggccaggacggttccgctgtgcttgagcttgacctttgc +aaccgtgatgtctcgcgtattacattcttccagaaggattgcaacaaatttacaacaggtgagactattgcc +catggtaaggtgggccaggggatttcggcttggagtaaaaccttctgtgctttatttggcccatggttccgt +gccattgagaaggagattctggctctgctcccacccaatatcttttatggcgatgcctatgaggagtcagtg +ttctctgcggccatttctggggctggctccagtatg---gtttttgagaatgatttttctgagtttgatagc +acccaaaataacttctctct------------------tggccttgagtgcgctattatggaggagtgtggc +atgccccaatggcttatccgactgtaccatctagttaggtcagcctggattctgcaagccccgaaagagtct +ttgaaaggcttctggaagaagcattccggcgagcctggcactctcctttggaacaccgtttggaacatggcg +atcatagcacactgctatgaattccgtgacctgagagtggcagcgtttaaaggggatgattcagtggttctc +tgcagtgactaccgccagagccgtaatgcggctactctgatagccggttgtgggttaaagttgaaggttgat +taccggcctataggtttgtatgccggcgttgtagttgccccgggcctcggggcacttcctgatgttgttcgc +tttgcaggtcgattatctgagaagaattggggtccgggccccgagcgcgccgaacagttgcgcctagcagtt +tgtgattttcttcgaaggctgacgaatgttgcgcaggtctgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacagactattgctgatggaaaggcccattt +tactgagactgttaagcccgtgctggatcttacaaactccatcatacagaggttagaatgaataacatgtt- +c----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gtcgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaatccggggctggaactcgcccta +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgccgtcgatctacccca---------actggggctgcgccgttaac +tgctgtctcaccagcgcctgatacggccccagtccctgatgttgactctcgtggcgctatcttgcgccgtca +gtataatctgtccacctcccctttaacttcatctgttgcctctggaactaatcttgtcttgtatgctgcccc +gcttaaccctctcctgcctcttcaggacggcaccaatactcacatcatggcgactgaggcgtctaattacgc +tcagtaccgggttgttcgggctacaatccgctatcgccccttggtgccgaatgccgtcggtggttatgcaat +ttctatttctttctggcctcagactacaactacacccacctctgttgacatgaattccattacttctactga +tgttaggattttagtccagcctggcatagcctctgagttggtcatcccgagtgagcgccttcactatcgtaa +tcaaggctggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggcttggtcatgctttg +tattcatggctcccctgttaattcttataccaacacgccctacactggggcactggggctccttgatttcgc +actcgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgttacactagtacagc +ccggcaccgcctacgccgtggtgccgatgggacagctgagcttacaaccactgcggccacacgttttatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggtgaggtgggtcgtggtatagccctaacgctatt +taatcttgctgatacacttctcggtgggctgccgacagaattgatttcgtcggctggaggtcaactgtttta +ctcccgcccggttgtctcagccaatggcgagccaactgttaagttatacacctctgtcgagaatgcacagca +ggataagggtattgctataccacacgatatagacctaggggattcccgtgtggttgtacaagattatgacaa +ccaacatgaacaggaccggcctaccccgtcgccggccccatcccgtcccttctcagtccttcgagccaatga +tgtcttgtggctctc-----------------------------tttgactgcagctgaatatgac------ +cagactacttatggctcgtcgaccaatcctatgtatgtttcagacactgtcacacttgt---taatgtggcg +acaggcgcccaggctgttgcccgatcccttgattggtccaaggttactttggacggccggccacttactacc +at-----ccagcagtactccaagacattttatgtgc-tgccgcttcgtggcaagctttccttctgggaagct +ggcacgactaag--gctggctatccttacaattacaacactactgctagtgaccagattctgattgagaatg +cagccggccat------cgtgttgctat-atctacttacactactagtcttgg--------------cgccg +gccctgtgtctgtttc-tgcggtcggcgttcttgccccgcactctgctctagctgtgcttgaagatactatt +gatt---------atcctgcccgtg----cccatacttttgatgatttttgccctgagtgccgcaatc---t +cggcctacagggctgtgctttccagtc--------tactattgctgagcttcagcgcct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----cc-t-c--ctt------gt +gccc-cct--------tc-taat-tt-ct----gt-ct-tgtt----------------att-t-------c +ttttttct----gcg---------------tttcg-cgctccccg---------------------gaa--- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>JF915746.1/17262/1-7262 |Hepatitis E virus isolate SAASFX17, complete genome +---------------------------agcagacca-cgtatg-------------t-----ggtcgacgc- +---catggaggcccatcagttcataaaggctcctggcgtcactactgctatcgag---caagcagctctagc +agcggccaactccgccttggcgaatgctgtggtggttcggcctttcctttcccggctacagacagagattct +gataaatctgatgcagccccggcagcttgttttccggcctgaggttctgtggaatcacccaatccagcgtgt +aatccacaatgagcttgagcagta---ctgccgagccc-gtgctggtcgctgccttgaggtgggagctcatc +cgcgttcgattaatgacaaccccaatgttttgcaccgttgctttctgaaaccccgtggtcgcgacgttcagc +ggtggtacaccgcccccacccgcggccctgcagcgaactgtcgccgatctgcccttcgtggacttccgcctg +ttgaccggacatactgttttgatggtttttctgggtgtacgtttgctgctgagactggggttgccctttatt +cactgcacgatctatggcctgctgatgttgcagaggcaatggcccgccacggtatgacccggctgtatgcag +cccttcatctc-cctccggaggtgctgcttcctcctggcacctaccataccacctcataccttttaattcat +gatggcgaccgtgctgtgatcacatatgagggtgactcgagcgcagggtacaatcatgatgtgtctattttg +cgtgcctggatccgcaccaccaaagttactggcgaccacccattggtcattgagcgggtccgggcggtaggg +tgccattttgtgcttttgctcacagctgcacctgagccatcgccgatgccttatgtcccatacccccgctcc +accgaggtctatgtccggtccatttttgggccaggc---------ggctcgccttctctcttcccatctgct +t----------gctcgactaagtcca-catttcacgccgtccctgtgcatatttgggacaggctcatgcttt +ttggtgcgacccttgatgaccaggctttttgctgctcgaggcttatgacgtacctccgtggtattagttata +aggttacagtcggtgctctcgtcgccaacgaaggctggaacgcttccgaagatgcgctgactgctgtaatta +ctgcagcttaccttaccatttgtcatcagaggtacctccgtacgcaggccatttcaaaaggaatgaagaggt +tggagcttgaacatgcgcagaaatttataacacgcctttatagctggctgttcgagaagtc---------cg +gccgtgattacatccccggccgtcagttgcagttttatgcccagtgtcgccggtggttgtctgccggctttc +atcttgacccacgtgtacttgtttttgatgaagcagccccctgt---cgttgtcgtaatttccttcggaa-- +----agctgcccataagttttgttgctttatgcggtggttaggtcagga------ctgcacctgtttcctcc +----------------aacctatcgagggacgggttggcgagcagggt--------tatgacaatgaagcat +ttgaagggtcggatgtcgaccctgctgaggaggcaactgtgagtatctctgggtcatatattgtaactggta +gccagctacagcctatatatcaggcgcttggtatcccccctgatattgctgctcgtgccggccggctcaccg +ccactgttgaagtttctgatgcagatggccgcctcacctgcaaaaccatcatgggcaataaaaccttctcaa +caatctttactgacggcgcccagttggaggccaacgggcc------------------------ggagcagt +atgtgctgtcattcgacccgatcaaacagactatggccgccggcccgcataatcttagctataccctgacat +ctgcaggccttgaaatacatgttgtttcc-------gccgggcttgattgtaaggccgtctttcca---tcc +ggggttgcgaccccgtctgcccctggggaggtgtctgccttttgttcagcactgtatagatttaaccgctgt +gttcagcggcactccctcgtcgggggtgtgtggtatcaccctgaggggctagtcggcctgttcccgccgttt +tcccccggtcatagctgggagtctgctaaccccttctgcggggagagtaccctttatacccgtacctggtcg +gtatcgggcttttccagttgtttttctccatttgaaccgggggtcccggacccgccccctcttgtt---gaa +actgacac----------acctgtagttgctgatac-tttgcct---------tcagtagct-----ccagt +at---------------cc----cccgagcaaa---tag--------------------cactcccaccaga +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tagataaggcagccggcccgactgta +cctagcacccccgct---------------gta-------------------ccaccagcaccagcgcagcc +tgtagttca--------------------------------------atcatctgggcctcgccggcg---- +-----------------gctgcttcatacttatcctgatggctcgaaggtgtatgctggctccctttttgag +tccgaatgtacctggctggttaatgcatctaaccctggccaccgccctggtggtggcctctgccatgcgttt +taccaacggttcccagagtcat------ttgatcccgctgagtttgttatgtcagatgg---gtttgcagcc +tacactctgtcccctcggcccattatccacgctgtcgcccctgactatcgggttgaacataaccccaagagg +cttgaggccgcctatcgggagacgtgctcccgtctcgggacagcagcttatcctctacttggctctggtata +tataaggtgcctgttgggctgagctttgacgcctgggaacgtaaccaccggcccggggatgagttgtatctg +actgaaccggccgtagct-------------------------------------------------tggtt +tgaggcaaaccggcccaccct--------------------------------------------------- +------------------------------------------cccagctcttactattactgaggataccgc +ac------------gtacggcgaatctggcgttggagctag------------actccgccactgaagttgg +ccgggcgtgt---gctggctgtcgtgtcgagcccggtgtcgttcattaccagtttacagcaggtgtccccgg +ctcaggtaaatctcggtcagtccagcagggggaggtggatgtggtagtggtaccgacccgtgagctgcgtaa +ctcgtggcggcgccgcgggttcgcagcctatacaccccacaccgcggctcgtgtcacccgtggccgtagggt +tgttattgatgaggccccgtcgctccctccacacttgctcttgctacatatgcagcgggcctcttcagtcca +tctcttaggtgatcccaatcaaatccctgctattgactttgagcatgccggccttgttccagctattcgacc +agagttggtcccgacaaaatggtggcacgttactcatagatgcccagctgatgtctgtgagttaatccgtgg +tgcgtacccaaagattcagactgcgagccgcgtactccgctctctgttttggggggaa------ccccctgt +gggccagaagttggtgttcactcaggcggcgaaggccgccaaccctggtgcgattacagtccacgaggccca +gggtgccacatttactgagactacaatcatcgccacggcggacgcccgagggctgattcagtcttctagggc +ccatgcaattgtggctctgacccgccacacagagaaatgtgtggtcgttgacgccccgggcctcctccgtga +ggttggcatctctgacgctattgttaacaatttc------------------------------ttcctttc +tggcg--gtcaggttggtcagcaccgcccgtcagtcataccacgcggcactattgaccgcaatgttgacac- +-----acttgatgcattcccgccctcctgccagtttagtgcctaccatcagctcgccgaggagcttggccac +cgaccggccccgattgctgctgtcttgcctccctgtccggagcttgaacagggcttgctctatatgcctcag +gagctcactacatcggatagtgtactaacatttgagcttacagatatagtgcactgccgtatggcggcacct +agtcagcgtaaggcagtcctgtcgactcttgtcggtaggtatggccgccgtacgaagttgtatgaagctgct +cacgcagacgttcgtgggtctctgaatcatttcatccctgagctccgccctatcagcgtcactacctgcgag +ctctatgagcttgtggaggccatggttgagaaaggccaggacggctctgcggttctggagctcgacttgtgc +agccgcgatgtctcgcggataacatttttccagaaagattgtaataagtttacaactggtgaaacaattgcg +catggtaaagttgggcaggggatatctgcatggagtaaaaccttttgcgccctgtttggtccctggttccgt +gctattgagaaagaaattcttgctgtgcttgcgcctaatgtattttatggtgatgcatatgaagacacggtt +ttggccgctgccgttgcaggagcctccgactgtaag---gtttttgagaatgatttttcagagtttgatagt +acccaaaataatttctcgct------------------cgggctggagtgtataattatggaggagtgtggc +atgccgcagtggatgattcggctctaccatctcgtccgctccgcctgggtcctccaggccccgaaggagtcc +ctgcgaggtttttggaagaaacattctggtgaacctggcactttgctctggaatactgtctggaatatggca +gttatagcccattgttatgagttccgtgacctaaaagttgcggcgtttaagggggatgattctgttgtgctc +tgtagtgactatcggcagagccgtgatgcagctgccttgattgccggctgtgggctgaagcttaaggtagat +tttaggcctattgggctgtatgctggtgtcgttgtggctccaggtttaggaaccctacctgatgttgttagg +tttgctgggcggctctcagagaagaactgggggcccggtttggagagggcagagcagctacggctggctgtt +tgtgattttctgcgaaggctaacgaatgtggctcaggtttgtgtggatgttgtctcgcaag-------tata +tggtgttagccctggcctggtgcataacttgattgggatgctccagactattgctgatggtaaggcgcattt +tacagaaacagttaaacctgtccttgatttgactaattccatcatataccgggtggaatgaataacatgttc +t----------------tttgctctgtgcatggag---------atgccgccatgcgctctcgggcttttct +gtttttgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gtcgccgcgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgcatccgacattccaaccgcaaccggggctggagctcgccctc +ggcagccagcccg---------------tccactcggctccgcttggcgcgaccaatccca----------- +------gcgccccgccgcttctgcccgtcgtcgacctgcccca---------gctggggcttcgccgctaac +agctgtagccccagcccccgacactgccccggttcccgacgtggactctcgtggtgctatattgcgccgcca +gtacaatttgtccacgtcaccgcttacgtccaccattgctactggcactaatcttgtattatatgctgcccc +actgagccctctgctccccctccaggatgggactaatactcatatcatggccactgaggcctctaactatgc +tcagtatcgcgttgtccgtgccactatccggtaccggcccctggtgccgaatgcggttggcggatacgccat +atccatctccttttggcctcagacgacaactaccccgacctccgtcgacatgaattccatcacttccaccga +tgtccgtatcctcgttcagcctggtatagcctctgaacttgtgatccctagtgagcgcctgcattatcgcaa +tcagggctggcgctcggttgagacttctggtgttgcggaggaggaggctacctctggccttgtcatgctttg +tatccatggatctcctgtgaattcctatactaatacaccctacactggtgctctcggcttgctcgattttgc +gcttgagcttgaatttcgtaatttgacacctggcaatacgaatacgcgcgtctctcgttattctagtagtgc +gcgccacaagttacgccgagggcctgatggtactgccgagttgaccacgactgctgctacacgcttcatgaa +agatcttcatttta---ccgggactaat---ggtgttggtgaggttggccgtggtattgcgctaactctgtt +taatcttgctgatacgcttctcggcgggcttccgacagaattgatttcgtcggctggaggccagctgtttta +ctcacgccccgtcgtctcagccaatggcgagccgacagtgaaactttacacctcagtagagaatgctcagca +ggacaagggtatagccattccacatgacattgaccttggtgagtcccgagttgtgattcaggattatgataa +tcaacacgagcaagaccgtcctactccctctcctgctccgtcacgtcctttttcagttcttcgtgccaatga +tgtgctctggctttc-----------------------------attgacggccgctgaatatgat------ +caaactacttatggttcttccactaatcctatgtatgtttctgacactgtgacatttgt---taatgtagcg +accggtgcccagggggtttcccggtccctggactggtccaaagtcacccttgacggccggccgctcacgact +at-----tcagcagtattctaagactttctttgttc-tgccacttcgtggcaagctctctttctgggaggcc +ggcactaccaag--gctggctatccttacaattataatactactgccagtgatcagattttaattgagaatg +cacctggtcac------cgtgtttgcat-ttctacttatactactaatctcgg--------------ttccg +gtcctgtttctatctc-tgctgttggtgtcctcgcacctcactctgcgctggccgctttggaggataccgtc +gact---------accctgctcgtg----ctcatacttttgatgatttctgccctgagtgccgtgcgc---t +cggtcttcagggctgcgctttccaatc--------aactgttgctgagctacagcgtct------------- +--------taaaatgaaggtgggtaaaacccgggagtattgatttattt----tt-cctt----------gt +gcct-ccc--------tt------cagtt--ctgt-ct-c-ttt--------------tatt-t-------c +tcttttct----gcg----------------tttcgcgctccctgg--------------actggtaaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------aaaaaa------------------------ +------------------------------------------------------------------------ +----------- +>HM055578.1/17189/1-7189 |Hepatitis E virus strain HEV072/sw/HUN05, partial genome +------------------------------------------------------------------------ +-------------------------------tctggcatcactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggtccggccgtttctgtcccgtacccagattgacattct +tattaatctgatgcaacctcggcagctcgtattccgccctgaagtcctgtggaatcatccgatccagcgagt +tatacacaatgagctagagcagta---ctgccgtgctc-gcgctggtcgctgcctggaggtgggggctcacc +caagatctattaatgacaaccctaatgtcttacaccggtgctttcttcgtccggttgggagagacgtacagc +gctggtactctgccccgactcgcggcccagcggccaactgccgccgctccgcgttacgaggtctaccccctg +tcgaccgtacctactgcttcgacgggttctcccgctgtgcctttgccgctgagactggaatcgccttatact +cattacatgacctctggcctgcggatgtcgcggaagccatggcccgccatgggatgacacgtttgtacgcag +cccttcatcta-ccccctgaggttctgttgccacctggtacctatcataccacctcttatttgttgattcac +gacggtaaccgcgctgtcgtaacttatgagggggatactagtgcgggttacaaccatgatgtgtccattctc +cgtgcatggatccgtacaactaagatagttggtgaccacccgttggtcatagagagggttcgtgctattggc +tgccattttgtgctgctcctcactgcagcccctgaaccatctcctatgccttatgttccataccctcgctcg +acagaggtgtatgtgaggtccatatttggccctggt---------gggtcgccttccctcttcccatcagcc +t----------gttctaccaaatcta-catttcatgctgttcctgtccatatctgggaccggctcatgcttt +ttggtgctaccctagacgaccaggccttttgttgctcgcgacttatgacttatcttcgcgggatcaagtaca +aggtgactgttggtgcacttgtcgctaacgaaggctggaacgcctcggaggacgcgctcactgctgtgatta +ctgcggcgtatttgactatctgccatcagcgctaccttcgaactcaggccatatccaaaggtatgcgtcggt +tggaagttgagcatgcccagaagtttattactagactttacagttggttgtttgagaaatc---------cg +gccgtgattatatccccggccgtcaacttcagttttatgcgcagtgccgccgctggctctctgccggcttcc +atctagacccccgagtccttgtctttgatgaggcggttccctgt---cgctgtaggagttttttgaagaa-- +----agttgctggcaagttctgctgcttcatgaagtggctagggcagga------gtgcacctgcttcctgg +----------------agccggccgagggtttgattggtgactgtggc--------catgacaatgaggcct +atgagggttccgaggtagatcctgctgagcctgcccaccttgacgtctccgggacctatgctgttcatggcc +accagcttgaggccctctatagggcactcaatgtcccacatgatattgcggctcgtgcatcacgcttgacgg +ccactgtggagcttaccgccagcccaggccgtcttgagtgccgcacggtgcttggaaataagaccttccgca +catcaataactgacggcgcccacctcgaggctaatggccc------------------------tgagcagt +atgttttgacatttgatgactcccgtcaggcaatgggggctgggcctcatagtcttacatatgagctcaccc +ctgttggtttgcaggttaagatatcctct-------aatggcctagactgcactgccgttttcccc---cct +ggcggggcaccgagtgctgcaccggctgaggttgcagctttctgcagtgccttatacagatacaatagattc +actcagcgccactcgctaaccggtgggttgtggttgcaccctgaggggcttttaggtttgttccccccgttc +tcccccgggcatatttgggagtccgcaaaccctttttgtggagagggtacactttatacccggacttggtct +acatctggcttctctagtgatttttccccccctgaggcggcttttgccgccccagcccctggtgg----ggt +tttgccgccgggcaccccctcttctgttagtgatgt-----------------ctgggtgct---------- +---------cccaccgccc----tccgagaggt--------------cagtggctgcttcactgtctgtagc +cccggt------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------------------------tagtaagcctactaacccgcccagc +accgctgtacctagg-------------------------------------ccttccgttcgtaagccacc +ttcaccgcc--------------------------------------accggctcgtactcgccggc----- +-------------------ttctttacacttatccggacggggctaaggtttacgcaggttccctgttcgag +tcagactgtgattggttggttaatgcttccaaccctggccaccgccctggtggtggcctctgccatgcgttt +tatcagcgcttcccagagtcgt------tccacccaactgactttattatgcgtgaggg---cctcgctgcc +tacaccctgactccacgcccgatcattcatgctgtggctcctgattacagggttgagcagaaccctaagagg +ttggaggcggcgtaccgtgagacctgctcccgtctcggcacagccgcttacccactattggggtcggggatt +tatcaggtccccgtgggtttaagctttgacgcctgggagcgtaaccatcgcccaggcgatgagctctacctc +actgagcccgctgccacg-------------------------------------------------tggtt +tgaggctaacaagccaaccca--------------------------------------------------- +------------------------------------------accggccttaacaattactgaagacacagc +tc------------gcacggccaaccttgcgctcgagattg------------actctgctaccgaggtggg +ccgtgcctgc---accggctgcactgttagccctgggattgtccattatcagtttactgccggggtacctgg +ctccgggaaatctaggtctatacagcagggggacgttgatgttgtggttgtaccaacccgcgagcttcgcaa +tagctggcggcgccgtggctttgctgcttttacaccccacacagcggcccgcgttactgccggtcggcgtgt +tgtgattgatgaagcaccatccctcccgccacacctcctgctgcttcatatgcagagggcctcgtcggtcca +ccttctcggcgaccccaaccagattcccgctattgattttgagcattcaggcctggtgccggcgatccgccc +cgagcttgccccaactagttggtggcacgttacacaccgctgcccagccgacgtgtgtgagcttatacgcgg +ggcttatcctaagatccagactaccagccgcgtgatgcgatctttgttttggaatgag------cctgcggt +aggccaaaagttggtcttcacgcaggcagcaaaggcagccaaccccggcgcaattaccgtccatgaagctca +gggcgccacatttacagagaccaccatcatagctacggccgatgctaggggtcttatccaatcctctcgtgc +gcatgcaatagtcgcactcactcgccacacagagaaatgtgtcattttggacgctcccggcctactgcgcga +ggtcggtatttcagatataattgtcaacaatttc------------------------------tttttggc +cggcg--gtgaggtgggccaccaccgcccctctactataccccggggtaacccagaccagaatttagatac- +-----tctgcaggcattccctccatcctgtcaaattagcgcctatcatcagctagccgaggagctgggccat +cgaccagccccagtggctgctgtactaccgccctgccccgagctcgagcagggtctactttacatgccacaa +gaactcacagtatccgatagtgttctggtttttgagctcacggacatagtccactgccgaatggcggcccct +agccagcggaaggccgtcctctcaacgctcgtcggcaggtatggccgccgaacgaagctgtatgaggcggct +cattctgatgtccgtgagtccttagcgaggtttatccctaccattggatcagtacaagccaccacatgtgag +ctgtatgaattagtggaggctatggttgagaagggtcaggacggttccgctgtgctagagcttgacctttgt +agccgtgatgtttcacgtatcacatttttccagaaggactgtaataaatttacaacaggtgagactatcgcc +cacggtaaggtgggccagggtatctcagcttggagcaaaaccttctgtgctctatttgggccgtggttccgt +gctattgagaaggagattttagccctactcccacctaatattttctatggtgatgcttttgaagagtcagtg +ttctctgcagccatttctggggcaggttcttgcatg---gtctttgagaatgacttctctgagtttgacagc +acccaaaataacttttccct------------------cggtcttgagtgcgttatcatggaagagtgcggc +atgccccagtggcttatccggctgtaccatttagtcaggtcagcctggaccttgcaggccccgaaagagtct +ttgaaaggcttttggaagaagcactccggtgagcctggcacactcctctggaacactgtctggaacatggcg +atcatagcgcattgctatgaatttcgcgatttgagagtggcagcgttcaaaggggacgattcagtggttctc +tgcagtgactaccgccagagtcgtaatgcggccaccttgattgctggttgtggattgaaattgaaggttgac +tatcgccctatagggctgtatgctggtgttgtcgtggctccaggcctcggggccctccctgatgttgtccgg +tttgccggcaggctgtcagagaagaactggggcccgagccccgagcgtgctgaacagttgcgcttagcagtt +tgtgattttcttcgaaggctgacgaatgttgcgcaggtctgtgttgatgttgtgtctcgtg-------ttta +tggggttagtcctggcttggtacataaccttattggcatgctgcagactatagccgatgggaaggctcattt +tactgagactgtcaaacctgtactggatcttacaaattctatcatacagaggttggaatgaataacatgtt- +g----------------tctgcatcgcccatggg------------atcgccatgcgccctcgggctgttct +gttgctgttcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cagcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaacccggggctggagctcgcccta +gacaaccgccccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctacccca---------gctggggctgcgccgttaac +tgctgtctcccctgcgcctgatacggctccggtccctgacgttgattcccgcggtgctattctgcgccgcca +gtataatttgtctacttcccctttgacttcttctgttgctgctggtaccaatcttgttctgtatgctgctcc +gctcaaccctcttttacctctccaggatggcaccaatacccacatcatggcgactgaggcgtctaactacgc +tcagtatcgggttgttcgggctacaatccgctatcgccctctggtgccgaatgctgttggtggctatgcaat +ttctatttctttctggccccagaccacaaccacccctacctctgttgatatgaactccatcacctctactga +tgttaggattttagtccagcctggtatagcctctgagttggtcatcccgagcgagcgcctccattatcgcaa +tcagggttggcgctctgttgaaacttcgggtgtggccgaagaagaggcgacatcaggtctggttatgctctg +cattcatggttcccctgttaattcctacaccaacacgccctatactggggcattgggacttcttgattttgc +acttgagcttgaatttaggaatttgacccctgggaacactaacacccgcgtgtcccggtacactagcacggc +tcgtcaccgcctacgccgtggtgccgatgggaccgctgagctcacaactactgcggccacgcgttttatgaa +ggacctgcacttca---ctgggacgaat---ggtgttggcgaggtgggtcgtggcattgccctgactttgtt +taatcttgctgatacacttcttggcggtttgccgacagaattgattttgtcggctggaggtcagctctttta +ttcccgcccagttgtctcggccaatggcgagccgactgtcaaattatatacttccgttgagaatgcacagca +ggataagggcattgctataccacatgatatagacctaggggattcccgtgtggtcattcaggactacgataa +ccaacatgaacaggataggcccaccccttcgccggccccgtctcgccccttttcggtccttcgtgctaatga +tgttttgtggctctc-----------------------------tctcactgctgctgagtatgac------ +cagaccacctatggttcgtccaccaaccctatgtatgtttcagacactgtcacctttgt---taatgtggct +acgggagcccaggctgtcgctcgctcccttgactggtctaaggtcactttggatggtcgacctcttactact +at-----tcagcagtactctaagacattctatgtgc-tcccacttcgcgggaagctttctttttgggaggcc +ggcactactaag--gccgggtacccttataactacaacaccactgctagtgatcagattttgatagagaatg +cagctggccac------cgtgttgctat-ctctacctatactactagccttgg--------------tgctg +gtccagtgtctgtttc-tgcagttggtgtccttgccccgcactctgctttagctgtgcttgaagataccatt +gatt---------accccgctcgcg----cccatacttttgatgatttctgccccgagtgccgtaatc---t +tggcctacaaggctgtgctttccaatc--------tactgttgctgaacttcagcgtct------------- +--------taaaatgaaggtaggcaagacccgggagtcttaattaa-ttt---ca-tcct----------gt +gccc-cct--------tc-tagg-ct-tc----gc-tt-ta-------------------tt-t-------c +ttttttct----gct----------------ttccgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaa---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>HQ634346.1/17256/1-7256 |Hepatitis E virus strain TW6196E, complete genome +---------------------------ggcagacca-cgtatg-------------t-----ggtcgacgc- +---catggaggcccatcagttcataaaggctcctggcgtcactactgctattgag---caggcagctctagc +agcggccaactctgccttggcgaatgctgtggtggttcggccctttttatcccgccaacagacagagatatt +aattaatttgatgcagccccggcagcttgtttttcggcctgaggttctgtggaaccaccccatacaacgtgt +gatccacaatgagctcgagcaata---ttgtcgagctc-gcgctggccgctgccttgaagtgggtgcccacc +cacgttcaatcaatgacaaccctaatgttttgcatcgttgttttcttaaaccagttggccgcgatgttcagc +ggtggtacactgcccccacccgtggccctgcggcgaactgtcgccggtctgctctccgcgggcttccacctg +ctgaccgtacatactgttttgacggcttctctggctgcacctttgccgccgagacaggtattgccctctatt +cactgcatgacctatggcctgctgatgtcgccgaggcgatggcccgccatggtatgactcggctctatgcag +cccttcatctc-ccccctgaagtgctattaccccctggcacatatcatactacctcatatcttttaattcat +gatggggaccgtgcagtgattacatatgagggggattctagtgcaggatataatcatgatgtgtccattcta +cgggcatggattcgtaccaccaaggtcaccggtaatcatccgttggtgattgagcgagtccgagcggtcggg +tgccattttgtgctcctcctcacagccgcgcccgaaccatcgccgatgccctatgttccatacccacgttca +accgaggtctatgttcggtccattttcggccctggt---------ggctcgccatccctttttccatctgcc +t----------gctctactaagtcaa-catttcatgccgtccctgtgcatatatgggataggcttatgcttt +ttggtgcgactcttgatgaccaagccttttgctgttccaggctcatgacgtatctccgtggcattagttata +aggtcacggtaggtgccctcgttgccaacgagggttggaatgcttctgaggacgcgctgactgccgtaatca +ctgcggcttatcttactatttgccaccagaggtacctccgtacgcaggccatctcgaaggggatgaaaaggt +tggagctcgagcacgcacagaaatttataacacgcctttacagttggctatttgaaaagtc---------tg +ggcgtgactacatccccggccgccaactgcagttttatgctcagtgccgccggtggctgtctgctggttttc +atcttgatcctcgtgtgctcgtttttgatgaatccgccccctgc---cgctgtcggagtttcctgcgtaa-- +----agccgcccacaagttttgctgttttatgcggtggctaggtcaaga------ctgcacctgttttcttc +----------------agcctattgaggggagggtcggtgagcaaggt--------tatgataatgaagcgt +ttgaggggtcggatgttgaccctgctgaggaagctaccgtgagcatctccgggtcatatattgtcaccggcc +gtcagctgcaacctctgtatcaagcgcttggtataccatctgatcttgctgcacgtgccagtcggcttgccg +ctaccgtcgaagtctcagatgctgagggccgtctcacttgcaagaccatcttgggtaataaaaccttttcaa +cggtattcactgatggcgcccagctggaggccaacgggcc------------------------agaacagt +atgttctatcatttgatttgactaaacaaactatggctgctggcccgcatagtcttagttacactttaacat +ctgaaggccttgaagtacatattatttcc-------gctgggcttgactgcaaggctgtcttcccg---cct +ggtgtcgcagccccctctgcctctggggaggtgtctgctttttgttcagctctctatcggtttaaccgctgt +gtccagcggcactcccttattggaggtttgtggtactatcctgagagcttagttggtttgttcccaccgttt +tcccccggtcatagctgggagtccaccaatcctttttgcggtgagagcactctttacactcgcacttggtct +gtgtcgggcttttccagctgtttctctcctctcgagcctcacgccccggagctgccaccttcaggt---gac +attgacat----------gtctgtagctgttgatac-ccagcca---------ttggttccc-----cctgt +gcagactcagccccaaatc----cccggtcctg---tcg--------------------cgcccccgccgga +cttgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttgacggtggtgctggccctggcttg +actagcgcctctgtg---------------gag-------------------cccccggcgcccgtgcagcc +tgtaatcca--------------------------------------gc---ccgggccccgtcgacg---- +-----------------actgctccatacttaccccgatggctcaaaagtgtatgccggatccctttttgag +tccgagtgtacatggctggttaatgcctctaacccaggccaccgtcccggtggtggcctctgccatgcattt +taccagcggttcccagagtcct------tcgatcccgctgagtttatcatgtctgacgg---gcttgcagcc +tacaccttgacgcctcggcctataattcatgctgtcgcccctgactatcgggttgaacataaccctaagcga +cttgaggccgcttaccgagagacgtgctctcgccgtgggacagcagcttaccccttgctcggcgctggtata +tacaaggtccctgttgggttgagctttgatgcttgggaacgtaaccaccgacctggagacgagctgtacttg +actgagccagccatagcc-------------------------------------------------tggtt +tgaggctaaccgacctaccct--------------------------------------------------- +------------------------------------------tcctgctctaactattactgaggacacggc +gc------------gcacggcgaacctagcactggagctgg------------atgcagccactgaggtcgg +ccgggcgtgc---gctggctgtcgtgttgaacccggtgtagtccattatcagtttacagccggtgtccctgg +ttctggtaaatcccggtcaatccagcaaggggatgtagacgtaatagtggtaccaacccgtgagctacgtaa +ttcgtggcgccgccgcgggtttgcagcctacacgccccacaccgcagctcgtgtgactcgcggccgtagagt +tgttatcgacgaggccccctcgcttccaccacacttgctcctgctgcatatgcagcgggcctcgtcagttca +tctccttggtgatcctaaccaaatccccgccattgatttcgagcatgccggcctcgttccggcaatccggcc +tgagttggttccaactaagtggtggcaccttacccacaggtgccctgcagatgtctgcgagctgattcgtgg +tgcatacccaaagatccaaactgcaagccgtgttctccgctctttgttttggggggag------cccccagt +gggccagaaactggtatttacccaagcggccaaggctgctaaccctggtgcgattacagttcatgaagccca +gggcgcgacatttactgagactacaattatcgccacggcggacgctcgcgggctgatccagtcctcccgggc +tcatgccattgtggctctgactcgtcacacggagaagtgcgtggtagttgatgccccggggcttcttcgtga +ggtgggtatctctgatgctattgttaacaacttc------------------------------ttcctctc +tggcg--gcgagattggtcagcaccgcccgtcagttgtgccccgtggcaccattagcagcaatgttgacac- +-----gcttgatgcgtttcccccttcctgtcagtttagcgcataccatcaactggccgaagagcttggccac +cggcccgcgccgattgctgctgtcttgcccccctgcccagagcttgaacagggtttactttatatgcctcag +gagctaactacatcggacagtgttctcacctttgaactgacggacattgtgcactgtcgtatggcagcaccc +agtcagcgtaaggcggtcctgtcgactcttgtcggcaggtacggccgccgcacgaagctgtacgaggctgcc +catacagatgtccgcgggtccctgaaccactttattcctgagcttggccctgttaacgttaccacctgcgag +ctctatgagcttgtagaggctatggtagagaagggccaagacggctctgcagtcctggaacttgacctatgt +aaccgtgatgtgtcccggataaccttcttccagaaagactgtaataaatttacaacaggtgagacgatagcg +cacggtaaagtcgggcagggtatatctgcgtggagtaaaactttctgcgctttatttggcccgtggttccgc +gctattgaaaaggagattctggcagcacttgcacctaatatcttctatggtgatgcctatgaggatacagct +ttggccgctgctgttgcaggcgccccttgctgtaag---gtttttgagaatgacttttctgagtttgatagt +acccaaaataacttttcact------------------tgggcttgagtgtataattatggaggagtgtggt +atgccacaatggatggtgcgactttaccatcttgttcgctccgcctgggtcctgcaggccccaaaagagtcc +ttgcgtggcttctggaagaagcactctggtgaacctggtaccttgctgtggaataccgtctggaatatggcg +gttatagcgcattgctatgagttccgggacctcaaagttgcggcatttaaaggggatgactctgttgtgctc +tgcagcgattaccggcagagccgtaatgcggctgctctaatcgctgggtgtgggctgaagcttaaggtggat +tttaggcccattgggctgtatgctggtgttgttgttgctccgggtctcgggacccttcctgatgttgttagg +tttgccgggaggctctcagagaagaactgggggccaggcccggagagggtggagcagctccggctggccgtt +tgtgactttttgcgaaagttaacgaatgtggctcaggtttgtgtggatgttgtttcgcagg-------ttta +tggtgttagccccggcttggtacataacctgataggaatgcttcaaactattgcggatggcaaagcacactt +tactgagacgattaagcctgttcttgaccttactaattctataatatatcgggtggaatgaataacatgttc +t----------------tttgctctttgcatggcg---------atgccaccatgcgctctcgggctcttct +gtttttgctcctcctgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gtcgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgcatctgacattccagcagccgccggggctggagctcgccctc +gacaaccagcccg---------------cccactcggctccgcttggcgtgaccagtccca----------- +------gcgccccgccgctcccgcccgtcgtcgacctacccca---------gctggggcttcgccgctgac +ggctgttgccccggcccctgacactgccccggtccctgatgtcgattcgcgtggtgctatactgcgccgtca +gtataacttgtccacgtctccactcacatccaccatcgccaccgggactaatcttgtgctatatgctgcccc +gcttagccctctactcccacttcaggatggcaccaacactcatattatggctactgaggcttctaattatgc +ccagtatcgtgttgtccgcgccaccattcggtatcgccccttggtgccgaatgctgtcggtgggtatgctat +atctatctctttttggccccaaacaaccaccaccccgacgtccgtggatatgaattccatcacttccaccga +tgtccgtatccttgttcaacccggtatagcttccgagttagtgatccccagtgagcgcctgcattatcgaaa +tcagggctggcgctcagttgagacctctggcgttgctgaggaggaggctacttccggtcttgttatgctctg +tattcatggatcacctgtgaactcctataccaatacaccttatactggtgctctcggcctgctcgacttcgc +gcttgagcttgagtttcgtaatttgacacctggtaatacaaacacgcgcgtttctcgttattcgagcagtgc +acgccacaaattgcgccgaggggccgacggcaccgctgagctaactactactgctgctacacggtttatgaa +ggatcttcatttta---cagggactaat---ggtgttggtgaggttggccgtgggatagcgcttaccttgtt +taaccttgctgatacacttctcggcgggctcccgacagaattgatttcgtcggctggtggccaactgttcta +ttcccgccccgtcgtctcagccaatggcgagccgacagtgaaactttacacttcagtcgagaatgctcagca +ggacaaggggattgctatcccacatgatattgatcttggtgagtcccgagttgttatccaggactatgacaa +tcaacatgagcaagaccgccctactccctctcctgcaccctctcgccccttttctgtgcttcgtgctaatga +tgtactttggctttc-----------------------------acttacggccgctgagtatgac------ +cagactacctacggctcttctaccaatcctatgtatgtttctgatactgtgacgttcgt---caatgtggct +accggcgcccagggggtttcgcgctccctggactggtctaaggtcaccctcgatgggcgcccactaactact +at-----ccagcagtattccaagactttctatgttt-tgcctcttcgtggtaagctttctttttgggaggcg +ggtactactaaa--gccggttatccttataattataatactactgctagtgatcagatcttgattgagaatg +cagctggccac------cgggtttgcat-ttctacttatactactaatttagg--------------ctctg +ggcctgtttctatttc-tgctgtcggtgtcctcgcacctcactctgcattggctgttttggaggacactgtc +gact---------atcctgctcgtg----ctcacacttttgatgacttctgccctgaatgccgtgcgc---t +cggtcttcagggttgtgcttttcagtc--------aactgtagctgagttgcagcgtct------------- +--------taaaatgaaggtgggtaaaacccgggagtattgattta-tt----ct-actt----------gt +gcct-tcc--------tt------ctgtc--tttt--c-ccttt--------------tatt-t-------t +ccttttct----gcg----------------tttcgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaaaa-------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>HM439284.1/17229/1-7229 |Hepatitis E virus isolate EChZ20, complete genome +----------------------------gcagacca-cgtatg-------------t-----ggtcgacgc- +---catggaggcccaccagttcataaaggctcctggcgtcactactgctatcgag---caagcagctctagc +agcggccaactccgccctggcgaatgctgtggtggttcggcctctcctttcccggctacagacagagattct +gataaacctgatgcagccccggcagcttgtcttccggcctgaggttctgtggaatcacccaattcagcgcgt +aatccacaatgaacttgagcagta---ctgtcgagccc-gtgctggtcgctgccttgaggtgggagcccatc +cgcgttccattaatgataaccccaatgttctgcatcgctgctttttgaaaccccgtggtcgtgatgttcagc +ggtggtataccgcccccacccgcggccctgcagcgaactgccgccgatcggctcttcgtggacttctgcctg +ttgaccggacgtactgttttgatggtttctctgggtgtactcttgctgctgagaccggggttgccctttatt +cactgcacgacctatggcctgctgacgtcgcggaggcaatggcccgtcacggtatgactcggttgtatgcag +cccttcacctc-cccccggaggtgctacttcctcctggcacctatcataccacttcataccttttaattcat +gatggcgatcgtgctgtgatcacatatgagggtgactcgagcgcagggtacaatcatgatgtgtctattctg +cgcgcccggatccgcaccaccaaggtcactggcgaccacccattggtcattgagcgggtccgggcggtaggg +tgccattttgtgcttttgctcacagctgcgcctgaaccatcgccgatgctttatgtcccataccctcgctcc +accgaggtctatgtccggtccatttttggaccaggc---------ggctcgccctctctctttccatctgct +t----------gctcgactaagtcta-catttcatgccgtccctgtgcatatctgggacaggcttatgcttt +ttggtgcgacccttgatgaccaggccttttgctgctcgaggcttatgacgtacctccgtggtattagttata +aggttacagtcggtgctttcgttgcctacgaaggctggaacgcctccgaggatgcgctgactgctgtaatta +ctgcagcttaccttactatttgtcatcagaggtatcttcgcacgcaggccatttcaaaaggaatgaagaggt +tggagcttgaacacgcgcagaagtttataacgcgcctttatagccggctgtttgagaagtc---------cg +gccgtgattacatccctgggcggcagatgcagttttatgcccagtgtcgccggtggttgtctgccggctttc +atctcgacccacgcgtactcgtatttgatgaagcagccccctgc---cgctgccgtaactttcttcggaa-- +----agctgcccacaagttctgctgcttcatgcggtggttgggtcagga------ctgcacctgcttcctcc +----------------agcctatcgagggacgggttggtgagcagggt--------tatgataatgaggcat +ttgaagggtcggatgttgaccctgctgaggaggcagctgtgagtatctctgggtcatatattgtaactggta +gccagctacagcctctatatcaggcacttggtatcccctctgatcttgctgctcgtgccggccggcttactg +ccactgttgaagtctctgacgcagatggccgccttacctgcaaaactattatgggcaataaaaccttctcaa +caatcttcgccgatggtgcccagctagaggccaatgggcc------------------------ggagcagt +atatgctgtcatttgacccggctaagcagactatggccgctggcccgcatagcctcagctacactctaacgc +ctgcaggtctcgaggtttctattgtctct-------gctggacttgattgtaaggttgtctttcca---ccc +ggcgtcgcaacgccctcagcccctggggaggtgtctgcattttgctcggctttatacaggttcaaccgctgt +gtccagcggcactctcttatcgggggcttgtggtactatcctgagggcctagtgggtctgtttccaccattc +tctccgggccatagctgggagtctgctaaccccttttgtggtgagagcacactctacacccgcacctggtca +gtatcaggtttttcaagctgtttctccccactcgagccctgtgccccggatctgccgccatccact---aac +attgatat----------gccta------ctaatgc-ccctctt---------cctgtaacc-----cctgc +acagacccagccaccgacc----cctgagcggg---tgg--------------------caccccccccgga +tttgc------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctgaccgtggtaccggcc---ccatg +accggtgcccctgcg---------------gcg-------------------tcccctacgccgccgcagtc +cataaccca--------------------------------------tttgtcagggccccgccggcg---- +-----------------actacttcatacctacccagatggctcaaaagtgtatgccggctcccttcttgag +tctgaatgcacctggctggtaaatgcttccaaccctggccaccgtcctggtggcggcctctgccatgcgttc +taccaacggttcccagagtcat------tcgatcccgctgagttcgttatgtcggatgg---gtttgcagcc +tacaccctgtccccccggcccattatccacgttgttgcccctgactatcgggttgaacataaccctaagagg +cttgaggccgcccatcgggagacgtgctcccgtctcgggacggcagcttaccccttacttggcgtcggtata +tataaggtgcctgttgggctgagctttgatgcctgggaacgtaaccaccggcccggggatgagctgtatctg +actgagccagccgtagct-------------------------------------------------tggtt +tgaggcaaaccggcccaccct--------------------------------------------------- +------------------------------------------cccagctcttactattactgaggataccgc +ac------------gtacggcgaacctggcattggagctag------------actccgccactgaagtcgg +ccgggcgtgt---gctggctgccgcgtcgagcccggtgttgtccattatcagttcacagcgggcgtccccgg +ctcgggtaaatcccggtcagtccagcagggggaggtggatgtggtagtagtaccaactcgtgagctgcgtaa +ctcgtggcggcgccgcgggttcgcagcttatacaccccacaccgcggcccgtgtcacacgtggtcgtagggt +tgttattgatgaggccccgtcgctccccccacacttgcttctgctgcatatgcagcgggcctcttcagtcca +tctcctaggtgatcccaatcaaattcccgctattgactttgagcacgccggccttgttccagctattcgacc +ggagttggtcccgacaaaatggtggcacgtcactcatagatgtccagccgatgtctgtgagttaatccgtgg +tgcgtacccaaaaatccagactgcaagccgcgttctccgctccctgttctggggggaa------cctcctat +tggtcagaagttggtatttacccaggctgcaaaggccgccaatcctggggcaatcacagtccatgaagccca +gggcgcaactttcactgagactacaattattgccactgcagacgcccgcgggctgattcagtcctctagggc +ccatgcgattgtggccctgacccgccatactgagaaatgtgcggtggttgatgctccgggactccttcgcga +ggttggtatctctgatgctatagtcaataactct------------------------------ttcctttc +cggtg--gtcaggtcggccagcaccgcccgtctgtcataccacgtggcaccattgacagtaatgttgatac- +-----acttgatgcattcccgccttcctgccagtttagtgctttccaccaactggccgaggatcttggccac +cgaccggccccgattgctgctgtcttgccctcctgcccggagcttgaacagggcttgctctacatgcctcag +gagctcactacatcggacagcgtactaacatttgagcttacagatatagtgcactgccgtatggcggcgcct +agccagcgcaaggcagtcctgtcgactcttgtcggtaggtatggccgccgtacgaagctgtatgaagctgct +catgcagatgttcgtgggtctctgaatcatttcatccctgagctccgtcctatcagtgtcactacctgcgag +ctttatgagcttgtggaggccatggttgaaaaaggccaggatggctctgcggttctggagctcgacttgtgc +agccgcgatgtctcgcggatagcatctttccagaaagactgcaataagttcacaactggtgaaacaatagcg +catggtaaagttgggcaggggatatctgcatggagtaaaaccttctgtgccctgtttggtccctggttccgt +gctattgagaaggaaattttggctgtgcttgcgcctaatgtattttatggtgatgcatatgaggacacagtt +ttggccgctgccgttgcgggagcccccggttgtaag---atttttgagaatgatttttcagagtttgatagt +actcagaataatttctcgct------------------tgggctggagtgtataattatggaggagtgtggc +atgccgcagtggatgattcgactctaccatcttgtccgctccgcctgggtcctccagaccccgaaggagtcc +ctgcggggtttttggaagaagcattctggtgagcctggcaccttgttatggaatactgtctggaatatggcg +gttatggcacactgttatgagttccgcgaccttaaggttgcagcattcaagggggatgattctgttgtgctc +tgtagcgattaccggcagagccgcaatgcggctgcgttgatcgctggttgtgggctgaagcttaaagtggat +tttaggcctattgggttatatgctggtgttgttgttgccccgggccttggcacccttcccgatgtcgtcagg +tttgccgggcggctctcggagaagaatcgggggccaggcccggagagagcagagcagcttcggctggctgtt +tgtgactttctgcgaaagttaactaatgtggctcaggtgtgtgtggatgttgtttcgcagg-------ttta +tggtgttagccctggtttggtacataacctgattggaatgcttcagactattgccgatggtaaggcacattt +taccgagacaattaagcctgtccttgatcttaccagttctattatataccgggtggaatgaataacatgttc +t----------------tttgctctgtgcatggag---------atgccaccatgcgctctcgggccctttt +gtttctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------gcgctctctcgtctggcc------------gtcgccgcgggcg-gcgcagcggcggtgc +tgtcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaatcccttcgcatccgacattccaaccgcaaccggggctggagctcgctctc +ggcagccagcccg---------------tccactcggctccgcttggcgcgaccaatccca----------- +------gcgccccgccgctcccgcccgtcgtcgacctgcccca---------gctggggcttcgccgctaac +agctgtagccccagcccctgacactgctccggtccctgacgtggactctcgtggtgctatattgcgccgcca +gtacaacttgtctacgtcaccgcttacatccaccattgctactggcactaatcttgtactatatgctgcccc +actgagccctttgcttcccctccaggatgggactaatactcatatcatggccactgaggcctctgactatgc +tcagtatcgtgttgtccgtgccactattcggtaccggcctctggtgccgaatgcggttggcgggtacgctat +atccatctctttttggcctcagacgacaaccaccccgacctccgtcgatatgaattccatcacatctactga +tgtccgtattcttgttcaacctggtatagcctctgagattgtgatacctagagagcgcctgcattatcgcaa +tcagggttggcgctcggttgagacttctggtgttgcggaggaggaggctacctctggccttgttatgctttg +tatccatggatcacctgtaaattcttatactactacaccttacactggtgccctcggtctgctcgactttgc +actcgagctcgagtctcgcaatttgacacctggtaatacgaacacgcgcgtctcccgttattcgagtagcgc +acgtcacaagttgcgccgaggacctgacggtacagcggagctaactactactgctgctacacgtcttatgaa +agatctccatttta---ctgggattaat---ggtgttggtgaggtcggttgtggtatagcgctgaccctgtt +taatctcgccgatacgcttctcggcgggctcccgacagaattaatttcgtcggctggcggccagctgtctta +ttcccgccccgtcgtctcagccaatggcgagccgacagtgaaactttacacttcagttgagaatgctcagca +ggacaagggtatagccattccacatgatattgtccttggtgagtcccgagtggcgattcaggattatgataa +tcaacatgagcaagaccgtcccactccttcccctgcctcctcacgtcccttctcggttcttcgtgctaatga +tgtgctttggctttc-----------------------------attgaccgctgctgaatatgac------ +caaactacttacggttcttccaccaatcctatgtatgtttctgacactgtgacatttgt---taatgtagcg +accggtgcccagggggtttctcgttccctggactggtctaaagtcaccctcgatggtcggccgcttacgact +at-----tcagcagtattctaagattttctctgttc-taccccttcgtggcaagctctctttctgggaggcc +ggcactactaaa--gctggctacccttataactataacaccactgccagtgatcagattttaattgaaaatg +cacctggccac------cgtgtctgtat-ttccacctatactactaatctcgg--------------ttccg +gtcctgttgctatttc-tgctgtaggtgtcctcgcacctcactctgcgctggccgctttggaggataccgtt +gatt---------atcctgctcgtg----ctcacacttttgatgatttctgccctgagtgccgtgcgc---t +cggtcttcagggctgcgctttccaatc--------gactgtcgccgagctacagcgttt------------- +--------taaaatgaaggtaggtaaaactcgggagtattgattta-tt----tt-cctt----------gt +gcct-ccc--------tt------cagtt--ttgt-tt-c--tt--------------tatt-t-------c +tcttttct----gcg----------------tctcgcgctccccc--------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>HM152568.1/17272/1-7272 |Hepatitis E virus isolate bisw5, partial genome +----------------------------gcagacca-cgtatg-------------t-----ggtcgacgc- +---catggaggcccaccagtttataaaggctcctggcgtcactactgctattgag---caggcagctctagc +agcggccaactccgccttggcgaatgctgtggtggttcggcctttcttgtcccggcttcagactgagattct +cataaacttgatgcagccccggcaacttgttttccggcctgaggttctgtggaatcacccaattcagcgcgt +gattcacaatgagcttgagcaata---ttgccgagccc-gggccggacgttgtcttgaggtgggtgctcacc +cacgctccattaatgacaatcctaatgtcctgcaccgctgctttcttaaacctgttggccgcgatgttcagc +ggtggtacaccgcacctacccgtggccctgcagcaaattgccggcggtccgctctccgcgggcttccacctg +ttgaccggacttactgttttgatggcttttcaggctgcacatttgccgccgaaacgggggttgcactttatt +cactgcacgacctttggcctgctgatgttgcggaggcgatggcccgccatggcatgactcgattgtatgcag +cccttcacctc-cccccggaggtgttactccctcccggcacctaccacaccacttcatacctcctaattcat +gacggggaccgtgcggtgattacatatgagggagattccagtgccgggtataatcatgatgtgtctatttta +cgtgcttggatccgtacgaccaaggtcaccggcgaccacccgctggtgattgagcgggtccgggctgtgggc +tgtcattttgtcctcctcctcacagctgcacctgagccgtctccaatgccctatgttccataccctcgttcg +accgaggtttacgttcgttctatttttggccctggg---------ggttcaccatccctctttccatctgcc +t----------gctcaaccaagtcaa-catttcatgccgtccctgtgcacatatgggacaggcttatgcttt +ttggagcgacccttgacgaccaggccttctgctgctctaggcttatgacatatctccgtggcatcagttata +aggtcacggttggtgcccttgtcgccaatgaaggttggaatgcttccgaagatgcactgactgctgtaatca +ccgcagcctatttaactatttgccatcagagatacctccgcacgcaggccatctctaaagggatgaagaggc +tggagcttgagcatgcacaaaaatttataacgcgcctttatagctggttatttgagaagtc---------tg +ggcgtgattacatccctggccgccagctgcagttttatgctcagtgccgccggtggctatctgccggcttcc +accttgaccctcgggtgcttgtatttgatgaggcagccccctgt---cgttgtcggagttttctccgcaa-- +----ggctgcccacaagttctgttgcttcatgcggtggcttggccagga------ttgcacctgttttctcc +----------------agcctattgaggggagggtcggtgagcagggt--------tatgacaatgaggcat +tcgagggatcagatgttgaccccgccgaagaagccatcgtgagcatctccgggtcatacatcgttgccggta +gccagctgcagcccctctaccaagcactcggcctaccttccgatcttgccgctcgtgcaagccgactcactg +ctaccgttgaggtctctgatgctgacggccgtcttacctgtaagaccaccatgggtaataagaccttttcaa +cagtttttgctgatggcactcagctggaggccaacgggcc------------------------agaacaat +atgttttgtcatttgacctggcgaaacaaactatggctgcaggcccgcatagtcttagttatactctgacac +ccgcaggccttgaggtgcatgtggtctcg-------gccgggctcgattgcaaggccgtcttcccg---ccc +ggcgtagcggccccctctgctgctggggaggtgtccgctttctgcgcggctctgtacaggtttaaccgctgt +gtccaacggcactctcttatagggggcctatggtatcaccccgaggggcttgttggcctgttcccgccattt +tccccaggtcatagttgggagtctgcgaatcccttctgcggtgagagcaccctctacacccggacctggtca +gtctcgggcttttctagctgtttctcaccgcttgaaccctgtaccccgagtgcgctacctcctgca---gag +gctagtac----------atctgtggttatagatac-tcaacct---------ttagagatt-----atgga +gcaggtccagcccccggcc----cctgagccgg---cgg--------------------tgtctccacccaa +ttcag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcgataatagtgttagtctcatccca +cccagcgtatccaat---------------gca-------------------cccccggcgtcggcgccgct +tgtaaccca--------------------------------------cctatctgggccccgccggcg---- +-----------------gttgcttcatacttaccctgacggctcgaaagtgtatgccggctctctttttgag +tccgagtgcacttggctggttaatgcatccaacccaggtcaccgccctggtggcggtctctgccatgccttt +taccagcggttcccagagtcat------ttgaccccgccgagtttgtcatgtcagatgg---gcttgcagcc +tataccctaactccccggcctattattcatgctgttgcccccgattatcgggttgaacataaccctaagcgg +cttgaggctgcctatcgggagacatgttctcgccgggggacggccgcttaccccttgctcggtgctggcata +tatagagtccccgttgggttgagcttcgatgcttgggagcgtaatcaccggcctggagatgaactatatctg +actgagccagccatagct-------------------------------------------------tggtt +tgaggctaatcggcccaccct--------------------------------------------------- +------------------------------------------ccctgctttgactataaccgaggatacggc +cc------------gtacagcgaatctggcgcttgagctgg------------acgcagccacagaggtggg +ccgtgcgtgt---gctggttgtcgtgtggagcccggcgtaattcgctatcaattcacggcgggtgtccctgg +ctctggtaagtccaggtcaatccaacagggggatgtagatgtgatagtggtgccaacccgcgagctgcgtaa +ctcatggcgtcgccgcgggtttgcggcctacacaccccatacggcagcccgtgtaactcgtggccgcagggt +cgttatcgatgaggccccttcactcccaccgcatctgcttttgttgcgtatgcagcgggcctcatcagttca +tctcctcggtgaccctaatcaaatccctgccattgattttgagcacgctggccttgtaccagcgattcggcc +cgagctggtccctacaaagtggtggcatctyacccatagatgcccggcggatgtctgtgagttaatccgcgg +cgcatacccgaagatccagactgcaagccgcgtcctccgctctttgttttggggggaa------ccccccgt +gggtcagaagctggtatttactcaggcggcgaaggctgcaaaccctggtgcgattaccgtccatgaggccca +gggtgcaacatttactgagaccacgattattgccacggcagatgctcgtgggctgattcagtcttctagagc +ccacgcgattgtggccctaacccgccacacggagaagtgcgtggtggtcgatgcaccaggactccttcgtga +ggtaggcatttctgatgctattgttaataatttc------------------------------ttcctctc +tggtg--gtcagatcggccagcaccgtccatcggttataccgcgtggcactattgaaaacaatgttgacac- +-----acttgatgctttcccgccctcttgtcagtttagtgcctaccatcagttagccgaggagctcggtcac +cggcccgctccaattgctgccgttctgcccccctgtccggagctcgaacagggtttgctctacatgccccag +gaattgacaacatcggatagcgtgctcacctttgagctcacggacatagtgcattgtcgcatggcggctccc +agccagcgcaaggcggtcctgtcaactctcgttggccggtacggccgtcgtaccaaattgtacgaggctgca +cacacagatgtccgtgggtccctgaatcactttatccccgagctcggccccattaatgttaccacctgtgag +ctctatgagcttgtggaggctatggtagagaaaggccaggatggcaccgcggttttggagcttgatctatgt +agccgtgatgtgtcccggataacattcttccagaaggattgtaataaatttacaacgggtgagacgatagcg +catggtaaagtcgggcaggggatatccgcatggagtaagaccttctgtgctttgttcggcccatggtttcgc +gctattgagaaagaaatcctggcagcgctcgcacctaatgttttttatggtgatgcgtatgaagatacagtc +ctggctgccgctgttgccggtgcccccggctgcaag---gtttttgagaatgatttttctgagtttgatagc +acccaaaataatttttcgct------------------cgggttagagtgtataattatggaggagtgtggc +atgccgcagtggatgatccgtctctatcacctcgttcgctccgcctgggtcctgcaggccccgaaggaatct +ctgcgaggcttctggaagaaacactctggtgagcccggcaccctactatggaacactgtttggaatatggcc +gtcatagcacattgttatgagtttcgcgaccttaaagtcgcagcgttcaagggggatgattctgttgtgctt +tgtagtgattatcggcagagccgtgatgcagctgccttgattgctggttgtgggttgaagcttaaagtggat +tttaggcctattgggttgtatgctggtgtggttgtggccccgggtttagggactctgcccgatgttgttagg +tttgccggccggctctcggaaaagaactgggggccaggcccggagagggcggagcagctccgactggccgtt +tgtgattttctgcgaaagttaacgaatgtagctcaggtttgtgtggatgttgtttcgcagg-------ttta +tggtgttagccctggtttggtacataacctgatggggatgcttcagaccattgccgatggcaaggcacactt +tactgagacaattaagcctgttcttgaccttaccagctccattatataccgggtggaatgaataacatgttc +t----------------tttgctctgtgcatggag---------atgccaccatgcgctctcgggctctttt +gtttctgctcctcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gtcgccgcgggcg-gcgcaacggcggtac +cggcagtg-gtttctggggtgaccgg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgcatctgacattccagccgccgccggggctggagctcgccctc +ggcagccaacccg---------------tccactcggctccgcttggcgtgaccagtccca----------- +------gcgccccgccgctcccacccgtcgtcgacctgcccca---------gctggggcttcgccgttgac +ggctgtggccccggctcctgacactgtgcctgtccctgatgttgattctcgtggcgctatcttacgccgcca +atacaatctgtctacatccccgctcacatccactattgctactggcactaatcttgtgctatacgctgcccc +acttagtcccctgctaccgctccaggatggcactaatacccatattatggctactgaggcatctaattatgc +ccagtatcgtgttgtccgcgccaccattcgataccgtcccttggtgccgaatgccgttggtgggtatgctat +atctatctctttttggccccagacaacgaccaccccaacgtccgttgatatgaattctattacttccactga +tgttcgcattcttgtccagcccggtatagcctctgagctggtaattcctagtgaacgcctgcactatcgaaa +tcaggggtggcgttcagttgagacttctggtgtcgctgaggaagaagcgacctctggcctcgttatgctttg +cattcatggatcacctgtgaattcttatactaatacaccttacaccggtgcccttggtctacttgattttgc +actcgagctcgagtttcgcaatttgacacctggtaacactaacacgcgtgtttctcgctattcgagtagcgc +gcgtcataaactgcgccgagggcctgatggtactgctgagttgactactactgctgccacacgctttatgaa +agaccttcatttta---cggggactaat---ggtgttggtgaggtcggtcgcggtatagctttgactttgtt +taatcttgctgatacgcttctcggcgggcttccgacagaattgatttcgtcggctggaggtcaattattcta +ctcccgccccgttgtctcagccaatggcgagccgacagtaaaactttacacttcggtcgagaacgctcagca +ggacaagggtatagctatcccacatgacattgaccttggtgagtcccgtgtggttattcaggattatgacaa +ccaacatgagcaggatcgtcctaccccctcccccgctccctctcgtcctttctctgttctccgtgccaatga +tgtgctttggctttc-----------------------------gcttactgctgctgagtacgat------ +caaacaacttatggttcttctactaatcctatgtatgtttctgatactgtcacatttgt---caacgtggcg +actggcgcccagggggtttcacgctctctggactggtctaaggtcacccttgatggtcgcccgctcactacc +at-----ccagcagtattctaagaccttttatgttt-tgcccctccgtggtaagctctccttttgggaggct +ggtactactaaa--gccggctatccttataattataacaccactgctagcgaccagatcctgattgagaatg +cagctggccac------cgagtttgcat-ctccacctacactactaacctggg--------------ctctg +ggcctgtatctatttc-tgctgttggtgtcctcgctcctcactctgcactggctgctttggaggataccgct +gact---------accctgcccgcg----cccatacttttgatgatttttgccctgagtgccgcgcgc---t +tggcctccagggttgtgcttttcaatc--------tactgttgctgagctgcagcgtct------------- +--------taaaatgaaggtgggtaaaacccgggagtattgattta-tt----tt-gctt----------gt +gccc-ccc--------tt------ctgct--atgt-tt-ccttt--------------tatt-t-------t +tcttttct----gcg----------------tctcgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------aaaaaaaaa--------------------- +------------------------------------------------------------------------ +----------- +>GU206559.1/17270/1-7270 |Hepatitis E virus isolate bjsw1, complete genome +----------------------------gcagacca-cgtatg-------------t-----ggtcgacgc- +---catggaggcccaccagtttataaaggctcctggcgtcactactgctattgag---caggcagctctagc +agcggccaactccgccttggcgaatgctgtggtggttcggcctttcttgtcccggcttcagacggagattct +cataaatttgatgcagccccggcagcttgttttccggcccgaggttttgtggaatcacccaatccagcgtgt +gatccacaatgagcttgagcaata---ctgccgagccc-gggccggacgctgccttgaggtaggcgcccacc +cacgctccattaatgacaatcctaatgtcttgcaccgctgctttcttaaacctgttggccgcgatgttcagc +ggtggtacaccgctcccacccgtggccctgcagcaaattgccggcggtccgctcttcgcggacttccacctg +ttgaccggacttactgttttgatggcttttcaggctgcacatttgccgccgagacgggggttgcactttact +cattgcacgacctttggcctgccgatgttgcggaggcgatggcccgccatggcatgactcggttgtatgcag +cccttcacctc-cccccggaggtgttactcccccccggcacctaccataccacttcatacctcctaattcat +gatggcgaccgtgcggtgattacatatgagggggattctagcgccgggtataatcatgatgtgtccatttta +cgtgcttggatccgtacgaccaaggtcactggtgatcacccgctggtgattgagcgggttcgggctgtggga +tgtcattttgtactcctcctcacagctgcacctgagccgtcgccaatgccttacgttccataccctcgttcg +accgaggtttatgttcgttctatttttggtcctggg---------ggttcaccatccctcttcccatctgcc +t----------gctcaaccaagtcaa-catttcatgccgtccctgtgcacatatgggacaggcttatgcttt +tcggagcgaccctcgatgaccaggccttctgctgctctaggcttatgacatatctccgtggcattagttata +aggtcacggttggtgcccttgttgctaatgaaggttggaatgcttctgaagatgcattgactgctgtaatca +ctgcagcctatttaaccatttgtcatcagagataccttcgcacgcaggctatctctaaagggatgaagaggc +tggagcttgagcatgcacaaaaatttataacacgcctttatagctggttatttgagaagtc---------tg +ggcgtgattacattcctggccgccagctgcagttttacgcccagtgccgccggtggttatctgccggcttcc +accttgaccctcgggtgcttgtgtttgatgaggcagccccctgt---cgttgtcggagtttcctccgcaa-- +----ggctgcccacaagttttgttgcttcatgcggtggcttggccagga------ttgcacctgttttctcc +----------------agcctattgaggggagggtcggcgagcagggt--------tatgacaatgaggcat +ttgagggatcggatgttgaccccgctgaagaagccgctgtgagcatttctgggtcatatattgttgctggta +gccagctgcagcccctctaccaagcactcggcataccttctgatcttgccgctcgtgcaagccgactcactg +ctaccgttgaggtctctgatgctgacggccgtcttacctgtaagaccaccatgggtaataagaccttttcaa +cagtttttgctgacggcactcagctggaggccaacgggcc------------------------agaacaat +atgttttgtcacttgacctggcgaaacaaactatggctgcaggtccgcatagtcttagttatactttgacat +ccgcaggccttgaggtgcatgtggtctcg-------gccgggcttgattgcaaggccgtcttcccg---ccc +ggcgtagcggccccctctgctgctggggaggtgtccgctttctgctcggccctgtataggtttaaccgctgc +gttcaacggcactctcttattggaggcctatggtatcaccctgaggggcttgttggcctgttcccaccattc +tccccgggtcatagttgggagtctgcgaaccccttttgcggtgaaagcaccctctacacccggacctggtcg +gtctcgggcttttctagctgtttctcaccgcttgaatcctgtgccccgagtgcgttaccccctgcg---gag +gttaatac----------atctgtggtcatagatgc-cctacct---------ttagagatt-----actga +gcaggtccagcccccggcc----cctgagtcgg---cag--------------------cgcctccacccaa +cccag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcgataatggtgttagccccacccca +cctagcgtttccact---------------gta-------------------cccccggcaccggcgccgcc +tgtaaccca--------------------------------------cctatctgggccccgccgacg---- +-----------------gttgctccatacctatcctgatggcccgaaagtgtatgccggctctctttttgag +tctgagtgcacttggccggttaatgcatctaatccgggccaccgccctggtggcggtctctgtcatgccttc +taccagcggttcccagagtcat------tcgaccccgccgagtttgtcatgtcagatgg---gcttgcagcc +tatactctaactccccggcctattattcatgctgttgctcccgactatcgggttgaacataaccctaagcgg +cttgaggccgcctatcgggagacatgttctcgccgggggacgactgcttaccccttactcggtgccggcata +tatagagtccccgttgggttgagtttcgatgcctgggaacgcaatcatcggcctggagatgaactatatctg +actgagccagccatagct-------------------------------------------------tggtt +tgaggctaatcggcccactct--------------------------------------------------- +------------------------------------------ccctgccctgactataaccgaggatacggc +cc------------gtacagcgaatctagcgctcgagctgg------------acgcagccacggaggtggg +ccgtgcgtgt---gccggctgtcgtgtggagcccggcgtagttcactatcaattcacggcgggtgttcccgg +ctccggtaagtccaggtcgatccaacagggggatgtagacgtgatagtggtgccaacccgtgagctgcgtaa +ttcatggcgtcgccgcgggtttgcggcctacacaccccatacggcagcccgtgtgacccgtggccgcagggt +cgttatcgatgaggccccttcacttccaccgcatctgcttttgctgcatatgcagcgggcctcatcagttca +cctcctcggtgaccccaatcaaatccctgccattgattttgagcacgctggtcttgtaccagcgattcggcc +cgagctggtccctacaaagtggtggcatcttacccatagatgcccggcggatgtttgtgagttaatccgcgg +cgcatacccgaagattcagactgcaagccgcgttctccgctctttgttttggggggaa------ccccctgt +gggtcagaagctggtatttactcaggcggcgaaggctgcaaaccctggtgcgattaccgtccatgaagccca +gggtgcaacattcactgagaccacgattattgccacggcggacgctcgcgggctgattcagtcttctcgagc +ccacgcgattgtggccctaacccgccacacggagaagtgcgtggtagtcgatgcgccgggactcctccgtga +ggtgggcatttccgatgccattgttaataacttt------------------------------ttcctttc +tggtg--gtcagatcggccagcaccgtccgtcggttataccgcgtgatactattgaaaacaatgttgacac- +-----acttgatgccttcccgccctcttgtcagtttagtgcttatcatcagttggccgaggagctcggtcac +cggcccgctccaattgctgccgttctgcccccctgcccggagctcgaacagggtttactctatatgcctcag +gaactgacaacatcggatagcgtgctcacttttgagctcacggacatagtgcactgtcgcatggcagcgccc +agccagcgcaaagcggtcctgtcaactctcgttggccggtacggccgccgtaccaaattgtacgaggctgca +cacacagatgttcgtgggtccctgaatcattttatccccgagctcggccccattaatgttaccacctgtgag +ctctatgagcttgtggaggctatggtagagaagggccaggatggttctgcggttttggagcttgatttgtgt +agccgtgatgtgtcccggataacattcttccagaaggattgtaataagtttacgacgggtgaaacgatagcg +catggcaaagttgggcaggggatatccgcatggagcaagaccttctgtgctttgttcggcccgtggttccgc +gctattgagaaagaaatcctggcagcgctcgcacctaatgtcttttatggtgatgcgtatgaagatacagta +ctggccgccgctgttgccggtgcccccggctgcaag---gtttttgagaatgatttttctgagtttgatagc +acccaaaataatttttcgct------------------cgggttagagtgtataattatggaggagtgtggc +atgccgcagtggatgatccggctttatcacctcgttcgctcagcctgggtcctgcaggccccgaaggaatct +ctgcgaggcttctggaagaaacactctggtgagcccggcaccctactatggaatactgtctggaacatggct +gtcatagcacattgttatgagtttcgcgacctcaaagtcgcagcatttaagggggatgactctgttgtgctt +tgtagtgattatcggcagagccgtgatgcagctgccttgattgctggttgtgggttgaagcttaaggcggac +tttaggcctattgggttgtatgctggtgtggttgtggccccgggtctagggactctgcctgacgttgttagg +tttgccggccgactctcggaaaagaactggggaccaggcccggagagggcggagcagctccgactggctgtt +tgtgattttctgcgaaagttaacgaatgtggctcaggtttgtgtggatgttgtttcgcagg-------tcta +tggtgttagccctggtttggtacataacctgattgggatgcttcagactattgccgatggcaaggcacactt +tactgagacaattaagcctgttctcgacctcactagctccattatataccgggtggaatgaataacatgtgc +t----------------tttgctctgcgcagggag---------atgccgccatgcgctctcgggctctttt +gtttctgctcctcgtgtttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggct------------gtcgccgcgggcg-gcgcggcggcggtac +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgcatctgacattccagccgccgccggggctggagctcgccctc +ggcaaccagcccg---------------tccactcggctccgcttggcgtgaccagtccca----------- +------gcgccccgccgcttccacccgtcgtcgacctgcccca---------gctggggcttcgccgttgac +ggctgtggccccggctcctgacactgtgcctgtccctgatgttgattcccgtggtgccattttacgccgcca +gtacaatctgtccacatccccgcttacatctactattgctactggcactaatcttgtgctatatgctgcccc +acttagccccctgctaccgcttcaggatggcactaacacccatattatggctactgaggcatctaattatgc +tcagtatcgtgttgtccgtgccaccattcgataccgtcccttggtgccgaacgctgtcggcgggtacgctat +atctatctccttctggccccagacaacgactaccccaacgtccgttgatatgaattccattacttccactga +tgttcgcattcttgtccagcccggtatagcttctgagttggtaatccctagtgaacgcctccactatcgaaa +tcaagggtggcgttcggttgagacctctggtgtcgctgaggaagaagcgacctctggccttgttatgctttg +tattcatgggtcacctgtgaattcttatactaatacaccctataccggtgcccttggcttacttgactttgc +actcgagctcgagttccgcaatctgacacctggtaacactaacacgcgtgtttctcgctactcgagtagcgc +gcgtcataaactgcgccgagggcctgatggtactgctgaattgactactactgctgccacacgctttatgaa +agaccttcatttta---cggggactaat---ggtgttggtgaggtcggtcgtggtatagctttaaccctgtt +taatcttgctgatacgcttcttggcgggcttccgacagaattgatttcgtcggctggaggtcaattattcta +ctcccgccccgttgtctcagccaatggcgagccgacggtaaaactttacacttcggtcgagaacgctcagca +ggacaagggtatagctatcctacatgatattgacctcggtgagtcccgtgtggttattcaggattatgacaa +ccagcatgagcaggatcgtcctaccccctcccctgctccctctcgtcctttctctgttctccgtgctaatga +tgtgcttcggctctc-----------------------------gcttactgccgctgagtacgat------ +caaacaacttatggttcctctactaatcctatgtatgtttctgatactgtaacatttgt---taacgtggcg +actggtgcccagggggtttcgcgctctctggactggtccaaggtcactcttgatggtcgcccgctcactacc +at-----ccagcagtattctaagactttttatgtct-tgcccccccgtggtaagctttccttctgggaggct +ggtactactaaa--gctggttatccttataattataacaccactgctagtgaccagaccctgattgagaatg +cagctggccac------cgggtttgcat-ctctacttacactactaatctggg--------------ctctg +ggcccgtgtctatttc-tgctgttggtgtccttgctcctcactctgcgctggcagctttggaggataccgct +gatt---------accctgcccgtg----ctcatacttttgatgatttttgccctgagtgccgcacgc---t +cggcctccagggttgtgctttccaatc--------tactgttgctgagctacagcgtct------------- +--------caaaatgaaggtgggtaaaacccgggagtattgattta-tt----ct-gttt----------gt +gcct-ccc--------tt------ctgct--atgt-tt-ccttt--------------tatt-t-------t +tcttttct----gcg----------------ttccgcgctccctg---------------------gaagaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------aaaaaaa----------------------- +------------------------------------------------------------------------ +----------- +>FJ956757.1/17246/1-7246 |Hepatitis E virus isolate HEV_RKI, complete genome +--------------------------gca--gacca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgtttttatcccgtgttcagactgatatcct +cattaacttgatgcaaccccggcagcttgtgttccgacctgaagtcctctggaaccatccgatccagcgtgt +catacataatgagctggagcaata---ctgccgagccc-gtgctggccgctgtcttgaagtgggcgcccacc +caagatccattaatgacaaccctaatgttctgcaccggtgtttccttcgcccggttggaagagacgtccagc +gctggtattctgcccctactcgtggtccagcggccaactgccgccgttctgcgctacgcggcttgccccctg +tcgatcgcacatactgcttcgacgggttcgcccgctgcgcctttgccgctgagaccgggatcgcattatatt +cactgcatgacctttggccctcggacgttgcggaggctatggcccgccacgggatgacgcgcttgtatgctg +ccctccatcta-ccccctgaggttctgctaccacctggcacttatcatacaacctcttatcttttgatccac +gatggcaatcgtgccgtcgtgacttatgagggggatactagtgcgggctataaccacgatgtgtctatactc +cgtgcatggatccgcactaccaaaatagttggtgatcacccactggtaatagagagggttcgcgccatcggc +tgccatttcgtcttactccttactgcagcccctgagccgtctccaatgccttatgtcccgtaccctcgctca +acagaggtgtacgttaggtccatatttggccctggt---------gggtcgccttctcttttcccatcagcc +t----------gctctaccaaatcta-cattccatgctgttccggttcacatctgggaccggcttatgctct +ttggtgccaccttagatgaccaggccttctgctgctcgcggcttatgacttatctccgcgggatcagctata +aagtgaccgttggtgcacttgtcgccaatgagggctggaatgcctcggaggatgcacttacagctgtgatca +ctgcagcgtacttgactatttgccaccagcgctacttacgaacacaagccatctctaaaggcatgcgccggc +tagaggttgagcatgcccagaagtttatcacaaggttatatagctggctgtttgaaaaatc---------ag +gccgtgattacatccccggccgccagctccagttttatgcgcagtgtcgccgttggctctcggctggcttcc +atctggaccctagggtcctcgtttttgacgaggcggtcccctgc---cgctgtcggagctttttaaagaa-- +----ggccgccggaaaattttgttgttttatgaaatggttggggcagga------gtgcacctgctttctgg +----------------agccagcggaaggcctggttggtgactgtggt--------catgataatgaggcct +atgaagggtctgaggtggaccctgccgagcccgcccaccttgatgtttccgggacttatgcggtccacggcc +gccagcttgaggccctatatagagcgctcaatatccctgatgatattgcggctcgtgcgtcacgactgacgg +ccactgtggaacttgccgccagcccgggccgacttgagtgccgcacggtgcttgggaataagaccttccgta +catcaataactgatggtgctcacctcgaagccaacggtcc------------------------cgagcagt +atgtcttgacatttgacgactcccgccaggtaatgggggctgggcctcacagccttacgtacgaacttgtct +ctgctggtctccaggttaaaatatcttct-------aatggcttggattgtaccgctatatttccc---ccc +ggcggagcgccaagcgctgcaccaggtgaggttgcggctttttgcagcgccctatataggtacaataggttc +actcagtgccattcgttgaccggcgggctgtggctgcaccctgaggggctccttggcctgttcccccctttt +tccccggggcatctttgggagtctgcaaaccccttttgcggtgagagcacgctctacacacgaacttggtct +acatctggtttttctagcgatttctctccacccgaagcggctcacgtcgctccagtccctggcgc----ggg +actacccccgggtactccctcgtccgctagtgatgc-----------------ttgggtgtt---------- +---------cccgccgccc----tctgaggggt--------------cggtggtcgccccgccacccgaagc +ttcgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtaagccagctaacccgcctaga +tttattacacctgagc-------------------------cccccccctccccccccgtccgtaagccacc +tacaccacc--------------------------------------accggcccgcacccgccggc----- +-------------------tactttatacataccctgatggggctaaggtgtatgcaggctctttgtttgag +tcagattgtgattggctggttaatgcgtctaaccctggccaccgccctggtggtggtctttgtcatgcattt +taccagcgcttccctgagtcgt------tccacccgactgattttgttatgcgtgaagg---tctcgccgca +tacactttgtgcccgcgtccgatcatccatgctgtggcccccgactacagagttgagcagaaccctaagagg +ttagaggcggcgtatcgtgagacttgctcccgcctcggcacagcagcctatccgctactggggtcggggata +tatcaggtccctgtaggcttaagctttgacgcctgggaacgtaatcaccgcccaggcgatgaactttatctt +actgagccagctgctgcc-------------------------------------------------tggtt +cgaggctaataagcctaccca--------------------------------------------------- +------------------------------------------accagccctaacaattactgaagacaccgc +cc------------gcacagccaaccttgcgcttgagatcg------------actccgctactgaggtggg +tcgtgcttgc---gccggttgcactatcaaccccgggattgtccattatcagtttaccgccggggttccagg +ctccggtaagtctaggtctatacagcagggggatgttgatgttgtggtcgtgccaactcgtgagcttcgtaa +cagttggcggcgccgcggctttgctgctttcacaccccacacagcagctcgtgttactgccggccggcgtgt +ggtgatagacgaagcaccttcgctaccaccgcacttgctgttgctccatatgcagcgggcctcatcggtcca +tctccttggtgaccctaaccagatccctgctattgattttgagcacgccggactggtcccggcgattcgccc +tgagcttgcccctactagttggtggcacgtcacccatcgctgccccgctgatgtttgtgagctcatacgcgg +ggcctatccaaagatccagacgactagccgtgtgttgcgatccttattttggaatgag------ccagcggt +gggccagaggctggttttcacacaggcagccaaggcggccaaccccggcgcaatcactgttcatgaggccca +gggcgccacgtttacggaaactaccatcatagccacggctgatgctaggggccttatccaatcctcccgtgc +acatgccatcgttgcacttactcgccatacagaaaaatgcgtcatactcgacgcccccggcctactgcgtga +ggtcggcatttctgatataattgttaataatttt------------------------------ttcctggc +tggtg--gtgaagttggccaccaccgcccttccaccataccccgtggcaacccggatcagaatttagacac- +-----tctacgagcgttccctccgtcctgccaaattagtgcctatcaccagctagctgaggagctgggtcac +cggccggccccagtggccgccatcctgcccccttgccctgagctcgagcaggggttactctacatgccgcag +gagcttacggtgtccgatagcgtcctaatttttgaactcacggacatagttcactgccgcatggccgcccct +agtcagcgtaaggcggtcctttcgacacttgttggtaggtacggccgccgaacgaagctgtatgaagcggcc +cattctgatgttcgtgagtctttaaggaggttcatccctactattggcccggtccgggctaccacgtgcgag +ctatacgagttggtagaggctatggtggagaagggccaggatggctctgctgtgctcgagcttgacctctgc +agccgcgacgtctcgcgtataacatttttccaaaaggattgtaataaatttacaacaggtgagaccattgcc +catggcaaggtgggccagggcatttcggcttggagtaaaactttttgcgccttattcggcccgtggttccgt +gccattgagaaggagattttggccctgctcccacctaacgtcttttatggcgatgcctatgaggaatcagtg +ttttctgcagccatttctggcgctggttccagtatg---gtttttgagaatgatttttctgagtttgatagc +acccaaaacaacttttctct------------------cggccttgagtgtgtcatcatggaggagtgtggc +atgcctcagtggcttattcgattgtaccacttggttagatcagcctggaccctgcaagccccgaaagagtct +ttgaaagggttttggaagaagcattccggcgagcctggcactctcctttggaacaccgtctggaacatggcg +atcatagcacactgctatgaattccgtgacttgagagtggcggcgtttaagggggatgattcagtggttctc +tgtagtgattaccgtcagagccgcaatgcggccaccttcatagccggctgtgggttgaaattgaaggttgat +taccggcctataggtttgtatgccggcgttgtcgtggctcctggcctcggggcgcttcctgatgttgtccgg +tttgccggtcgactatctgagaagaactggggccctggccccgagcgcgctgaacagctgcgcctagcagtt +tgtgacttcctccgaaggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------tcta +tggggttagccccgggctggtgcataaccttattggcatgctacagactattgcagatggaaaggcccattt +cactgagactgtcaagcctgtactggatcttacaaattctattatacagaggttggaatgaataacatgtt- +c----------------tgtgcattgcccatggg------------atcgccatgcgccctagggctgtttt +gctgttgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +gggcggtg-gtttctggggtgacagg--gttgattgtcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtaccacaacccggggctggagctcgccctc +gacaaccggcccg---------------ccccctcggctcctcttggcgtgaccagtccct----------- +------gcgcccccccgctgcctcccgtcgtcgatctgcccca---------gctggggctgcgccgctaac +tgctgtctcgccagcgcctgattcggctccagtccctgatgttgactctcgtggcgctatcttgcgccgcca +gtataatttgtccacttctcctttaacttcatctgttgcttctggaactaatcttgtcttgtatgccgcccc +gcttaatccccttttgcccctccaagacggcaccaatactcacatcatggcgactgaggcgtccaattatgc +tcagtatcgggttgtccgggccacaatccgctaccgccccttggtgccgaatgccgtcggtggttatgcaat +ttctatttccttctggcctcaaactacaactacgcccacttctgttgatatgaattctattacctctactga +tgttaggattttagttcagcctggcatagcctctgagctggtcatcccgagtgaacgcctccactatcgtaa +ccaaggttggcgctctgttgagacatcgggtgtggccgaggaggaggcgacatcaggtttggttatgctttg +tattcatggctcccctgttaattcctacaccaacacgccctacactggtgcgttagggctccttgactttgc +acttgagcttgaatttaggaacctgacccctgggaacactaacatccgtgtgtcccgttacactagtacagc +ccgacaccgtttgcgccgtggtgccgatgggacagccgagcttactaccactgcagccacacgttttatgaa +ggacttgcatttca---ccgggacaaat---ggcgttggtgaggtgggtcgtggcatagccctaacattatt +taatcttgctgatacacttctcggtgggctaccgacagaattgatttcgtcggccggaggtcaattattcta +ctcccgccccgtcgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgctcagca +ggacaagggtattgctataccgcacgatatagacttaggggagtcccgtgtggttatccaagactatgacaa +ccaacatgaacaggaccggcctaccccgtcgccggccccgtcccgccccttttcagttcttcgagccaatga +tgttctgtggctctc-----------------------------tctgactgcagctgaatatgat------ +cagactacttacggctcgtcaaccaaccccatgtatgtttcagatactgtcacatttgt---taatgtggcg +acaggagcccaggctgttgcccgttcccttgactggtccaaggtcaccttggatggccggccactcactacc +at-----ccagcagtactccaagacattttatgtac-tgccgctccgtggcaagctttccttctgggaggct +ggtacaactaag--gctggttacccttacaattataacaccactgctagtgaccagattttgatcgagaatg +cagccggtcac------cgcgttgctat-atccacttacactactagtctcgg--------------tgctg +gccctgtgtctgtctc-cgcggtcggcgttcttgcgccgcactctgctttagctgtgcttgaagacactgtt +gact---------accctgctcgtg----ctcatacttttgatgatttctgccctgagtgccgcaacc---t +cggcctgcagggctgtgcttttcagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----tt-cct--ttt------gt +gccc-cct--------tc-taaa-cc-cc----gc-tt-tgt----------------tatt-t-------c +ttttttct----gcg----------------tctcgcgctccctg---------------------gaaaaa +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>FJ906895.1/17318/1-7318 |Hepatitis E virus isolate GDC9, complete genome +---------------------------ggcagacca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccaccagtttattaaggctcctggcatcacaaccgccattgag---caagctgctctggc +tgcggccaattctgccctggcgaatgctgtggttattcggccgtttttgtcccgaacacagacagacatcct +cattaaccttatgcagccccggcaactggtcttccgcccagaggttttctggaatcatcctattcaacgtgt +tatacataatgagctagagcagta---ttgtagggccc-gtgcggggcgttgtcttgaggtcggagctcatc +caagatctatcaatgacaacccaaatattttgcaccggtgcttcctccggcctgttggtagagacgtccagc +ggtggtactctgcccccactcgtggccctgctgctaattgccgccgctctgcgttgcgcggcctccctcctg +tcgaccggacttactgctttgacgggttctctagctgcacgtttgcagctgagaccggtgttgctctttact +ccctacatgacctgtggcctgctgacgttgcggaggcaatggcgcatcacgggatgtcacgcctgtatgctg +tactgcacctc-cctcccgaggttttgctgccacctggcacttaccacaccacctcctaccttctgattcat +gacggcagccgcgccgtcgtaacctatgaaggtgatactagtgctggttataaccatgatgtctccatcctc +cgcgcttggatccgcacgacaaaaatcatcggtgaacacccgctggtgatagagcgtgtccgcgcgattggc +tgccactttgtgctgttgctcactgccgctcctgaaccatcgcccatgccctatgtcccttttccccgctct +acagaggtatttgtccgctcaatatttggtccaggt---------ggctcaccctccctcttcccgtcagca +t----------gctgtacaaagtcca-ccttctacgccgtccctgtccatatttgggataggctcatgcttt +tcggcgccacgctagacgatcaggccttctgctgctcgcggcttatgacttaccttcggggaatcagctata +aagtcactgtaggcaccctcgtcgccaacgagggctggaacgcctctgaggatgccctcactgcagtgatca +ccgcggcgtatctcaccatctgccaccagcgttacctccgcacccaagcgatctctaaaggtatgcgccggc +tggaggtagagcacgctcagaagtttgttaccaggctctatagctggctttttgagaagtc---------cg +gccgtgactacatccctggccgccagctccagttttatgcgcagtgccggcgctggctttctgctggctttc +acttggaccctcgggtgcttgtcttcgatgagtctgtgcactgc---cgttgtagaagtctggtaaggag-- +----tgcggcgaggaaggtttgctgtttcatgaagtggctcggccagga------gtgcacctgctttttgg +----------------agcctgtagagggcctgcttggcgaccaaggt--------catgacaacgaggcct +acgaggggtctgaggttgaccccgccgagcccgcccctaccgatgtgtcgggcacctatactgtccatgggc +gactgctggtggacctatataaagcactcaacgtcccgcaagagatagtagcccgggctgcgcgtttgccgg +ctactgtcgagcttgccgtcggtccagggcggcttgagtgccgtacgaccctgggcaataataccttccgca +ctatgttcactgacggcgcccaactggaggcaaatggccc------------------------tgagcagt +atgttctttcatttgatgaagcccgccagtgcatgggtgccgggccgcatagtcttgtgtatgagctcaccc +ccagtgggctgcaggttaaaattacatct-------aatggcttagattgcactgcagtcttccca---cct +ggcaaggccccgagtgttgaggctgcagaggtcacggccttctgcagcgctttgtatagatataacagaacc +atccaacggcactcaattgttggcgggctatggttacatccggggggattgctaggtctcttcccgcccttc +tccccaggccacttttgggaatctacgaacccgttttgcggtgaaggaaccctttacaccagaacctggtct +gagtctggctcctccagtgattttctaccacctgaggcagtcgttagtacccatccccccgctgac------ +-cgacctcataaaccggccccttctgaggctgatgt-----------------tcgaggccc---------- +---------gttatccccc---------------------------------------------ctcacggc +ccccg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------------gggttgttggcccacccg-- +-tcagcacccccggg-------------------------------------ccctctgctcataagccacc +tgggccatc--------------------------------------ttcagctcgtaaccgtcgcc----- +-------------------tcctttacacctatccagatggcgctaagatatactcagggtccctgtttgag +tcagactgcgattggctggttaatgcatctaaccccggccaccgtccgggcggcggcctctgtcatgccttt +taccagcgtttcccacagtctt------ttgaccatactaaatttattatgcgggacgg---gttagccgca +tataccttaacacctcgcccgatcattcatgcggttgcccccgattatagagtagcaaataacccaaaaaga +ttggaagcagcgtaccgtgagacttgttctcgcctcagcactgccgcctacccgttgctgggctcaggcatc +taccaggtccctgtaggcccgagtttcgacgcctgggaacgaaaccaccgacccggtgatgaactttatctt +accgagcttgcaacagct-------------------------------------------------tggtt +tgaggccaacaggccgactcggtcccttacacccacaactcacgatacagcctcagcagattaccccgcaac +aggtgccggcctctcaccgggggccgacaccggcccggcactgcccgccctgactataacagaggatacagc +tc------------ggactgccaatcttgcattggaaattg------------attctcggaccgagctagg +tcgggcttgt---gccggctgtactattagccctggggtagtccgctaccaatttaccgcgggcgttcccgg +gtccggcaaatcgaggtctatacagcagggtgatgttgatgttgtggttgtgcctacccgcgagctccgcgg +taattggcgccgccgcgggtttgctgcatttacaccccactcggccgcccgtgttactagcggtcgtcgtgt +tgtcatcgatgaagcaccatctctcccgcctcatttgttattactgcatatgcagcgcgcctcatcagtgca +ccttcttggcgatcctaaccagattcctgcaattgactttgagcatgctggccttgtccccgcaatccgccc +tgagctcgcccccaccagctggtggcacgttacgcaccggtgtcccgcggacgtctgcgagcttatacgtgg +ggcgtaccccaagattcagactaccagccgtgtgctgagatctctgttctggggtgaa------ccccccgt +tggccagaagctggttttcacgcaggccgcaaaggctgccaatcctggtgcgatcactgttcatgaggccca +gggggctactttcactgaaaccactattatcgcgacggctgatgctagagacctcatacagtcgtcccgagc +gcatgccattgttgcgcttacccgtcacacagagaagtgtgttattttggatgccccgggactgcttcgcga +ggtgggcatatcggatgtgatagttaataatttc------------------------------tttatagc +tggcg--gtgagatcggccatcaccgcccctccgtcgtacctcacggtaaccctgatcgaaaccttgacac- +-----cctccaggccttccccccctcctgccagatcagcgccttccaccagctggctgaggagcttggtcat +cggcccgcgcctgtggcagctgtccttccgccctgtcctgagctcgagcagggcttgctctacatgccgcag +gagctcacggtgtctaacagtgtcttggttttcgagttaactgatatagtccattgccgcatggccgcccct +agccagcgcaaggccgtcctttccacgctcgttgggcgttacgggcgtcggacgaagttatatgaagctgcc +cactcggacgtgcgcgaatcactcacaaggttcatccccatcatcggccctgtgcaggccacgacgtgcgag +ctttatgaactggtcgaggcgatggtggagaaaggtcaggatgggtcggctgtgctcgagcttgacctttgt +aaccgagatgtgtcgcgaataacgtttttccagaaagactgtaataagttcacaaccggtgagacgatcgcc +cacggcaaagtaggccagggaatatcagcttggagcaagaccctttgcgctttattcggcccctggttccgg +gccatagaaaaacagatattagccttgctcccgcctaacatcttttacggtgatgcgtacggggattccgtg +ttctctgtcgctgtcactggtgcggggtcaagcatg---gtatttgagaatgatttttcagaatttgatagt +acccagaataacttttcact------------------cggccttgaatgtgtgattatggaagaatgtggc +atgccccaatggctggttagattgtaccatctggtgcgatctgcctggattttacaagccccaaaggaatct +cttaaaggtttttggaagaagcattccggtgagcccggtacattgctctggaataccgtctggaatatggcg +gttatagctcactgctatgaattccgtgatttcagggttgccgcgtttaaaggggatgactcggtggttctt +tgcagtgactatcgtcagagtcgtttcgcgacggcattgattgcgggctgtgggctaaagcttaaagtcgac +tatcgtcctgtcgggctctacgccggagttgtggttgcccctggtctcggaacgctgcctgatatcgtccgg +ttcgccggacggctgtcagaaaagaaccggggccccggccctgaaagagcggagcagttacgcttagccgtc +tgcgactttttgagaaagttgacgaacgttgctcaggtctgtgttgatgttgtgtcgcgtg-------ttta +tggggtgagccctgggcttgtacataaccttatcggcatgctacaaactatcgccgatggcaaggcccacta +cactgaaactgtgaagcctgtgttggaccttacaaattctattgtgcagaggttagaatgaataacacgtt- +t----------------tctgcatcgcccatggg------------atcgccatgcgcactggggttgttct +gctgctgctcctcgtgtttttgcctatgttgcccgcgc---------------------------------- +-caccgg------ccggtcagtcgactggcc------------gccgtcgtgggcg-gcgcggcggcggttc +cggcggta-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctattttcat---- +--------------ccaaccaaccccttcgccgctgacgttgactcacattccgggtctggagccagacccc +ggcaaccagcccg---------------ccccctcggcacatcttggcgcgacttgtccca----------- +------gcgcccccccgctgcctcgcgtcgtcgatctacccca---------actggggctgcgccgttgac +tgccgtttcacccgcacctgacacggcgcctgtcccggatgtcgactctcgcggggctattctgcgtcgcca +gtataatctctcaacctcgcctttaacatcaactgttgcttcaggtactaatcttgttttgtatgccgcgcc +gcttaacccccttctgcccctccaggatggcactaacactcacatcatggccactgaggcatccaattacgc +ccagtatcgggttgtccgagccacaatccgttaccgacctttggtgcctaatgcagtcggcggttatgcaat +ctctatttctttctggccccaaaccactactacccctacctctatcgacatgaattcaattacttcgactga +tgttaggattcttgtccaacccggcctagcctccgaactcgtcataccaagtgagcgtctccactatcgtaa +tcagggttggcgctctgtggagacttctggcgtggctgaggaggaggctacttccgggcttgtcatgctttg +tatccatggttcccctgttaattcatacactaataccccttacactggggctctgggccttctcgattttgc +gcttgaggttgaattccggaatctgactccagggaacactaacacacgcgtctcccgttataccagcaccgc +ccgccaccgcctgcgccgtggcgccgatggaaccgccgaactcacaactacggcggccacacggtttatgaa +agacctccacttca---ctgggatgaac---ggggtcggtgaaattggtcgtggtatagccctgacgctatt +caacatagctgatacacttcttggtggcctgccgacagaattaatttcgtcggccgggggtcaggtattcta +ctcccgccctgtcgtctcagccaatggcgagccgactgtcaagttatatacatcagttgagaatgcacagca +ggacaaggggatcgcaatacctcatgatattgacctaggcgattcccgtgttgtcatccaggactatgataa +tcaacatgagcaagaccagcctactccgtcaccggccccctctcgccccttttccgtcctccgcgccaacga +tgtgttgtgggtctc-----------------------------actgactgccgctgaatatgat------ +cagactacatatggttcgtcgactaatcctatgtatgtctcagatactgtgacatttgt---caatgtggct +acaggcgctcaggccgtcgcccgctctcttgattggtctaaagtaactctggatgggcggccgcttactacc +at-----ccagcagcactctaagatattttatgtcc-tccccctccgtggcaaactttccttttgggaggct +ggcaccaccaag--gctggctacccttacaattataaccccccagccagcgatcaaatcctgatcgagaatg +cagccgaccat------cgtgttgctgt-ctcgacttaccctacaagtttggg--------------tgctg +gccctgcgtctatttc-cgcagtcggtgtgctcgctcccccctctgttctggctgtttttgaggatactgtt +gatt---------accctgctcgtg----ctcatacttttgatgatttccgccctgagtgccgtactc---t +tggcctgcagggttgtgcttttcagtt--------tactgttgctgagcttcaacgtct------------- +--------taagatgaaggtgggtaaaacccgggagttttaattaa-tt----ct-tgct----------gt +gccc-ccct-------tc-tatg-ttgat---tgt-tt--------------------tatt-t-------t +ttattttt----gcg----------------tttcgcgctccctg---------------------ggaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------aaaaaaaaaaaaaa---------------- +------------------------------------------------------------------------ +----------- +>FJ906896.1/17301/1-7301 |Hepatitis E virus isolate GDC46, complete genome +---------------------------tttttatca-cctaag-------------c-----ggtcaatgc- +---catggaggcccgccggtttattaaggctcctgggctcccaaccgcccttgag---caatttgctctggc +tgccggcaattctgccctggcgaatggtgtggttattcggccgtttttgtcccgaacacagacagacatcct +cattaaccttatgcccccccggcaactgggcttccggccttccgttttctggaatcatcccatccagcgagt +catacataacgagttagagcagta---ctgccgggccc-gtgcagggcgttgccttgaggttggagcccacc +ctaggtccatcaatgataacccaaatgtcctgcaccggtgtttccttcggcctgttgggagggacgtccagc +ggtggtattccgctcccacccgtggccctgctgctaattgccgccgctccgcgctgcgcggtttaccccctg +ctgaccgtacctactgttttgatgggttctctggctgccccttcgcggctgagaccggtattgctctctact +ccctacatgacctgtggcctgctgatgttgcggaggcaatggcgcaccatgggctggcgcgtctgtatgccg +tactacacctc-cctcctgaggtcttactgccaccaggcacttaccacaccacctcctaccttcttattcac +gacggcagtcgtgctgtcgtgacttatgaaggtgataccagtgctggttataaccatgatgtgtctatcctt +cgggcctggattcgtactactaaagtcaccggcgaccacccgctggtgatagagcgcgtccgcgctattggc +tgccattttgtgttgttacttaccgcagcccccgaaccctcgcctatgcctgcaggtcgacgattc---tct +acagaggtatttgtccgctcaatattcggtccgggc---------ggttcgccatctcccttcccgtcagca +t----------gctccacaaaatcta-cctttcacgccgtccctgtccatatttgggatagacttatgcttt +ttggtgcaacgctggatgatcaggccttctgctgctcgcggcttatgacttaccttcgcggtattagttata +aagtcaccgttggtgccctcgtagctaacgagggttggaatgcttccgaggacgccctaactgcagtgatca +ccgcggcgtacctcaccatttgtcaccagcgctacctccgcacccaggcgatttctaaaggcatgcgccggc +tggagcttgagcacgcccagaagtttatcaccaggctctatagctggctgtttgaaaagtc---------tg +gccgcgattatatccccggccgccagctccagttttatgcgcagtgtcggcgctggctttctgccggctttc +atctggaccctagagtgcttgtttttgacgagtctgtgcactgc---cgttgtaggagtttcgtaaagaa-- +----tgtggctactaagatttgctgctttatgaaatggcttggtcggga------gtgcacttgtttcttgg +----------------agcctgcagagggcttgataggtgaccagggc--------catgataatgaggctt +atgaggggtctgaagttgaccctgctgagcctgccccctctgatgtatcggggacctatattgtccacgggc +agctgctggtggatttatatagggcactcaacgttccgcatgatattgtagctcgggccgcacgtttgtcag +ctactgtcgagctcgtcactggtccagggcgacttgagtgccgcactattttaggtaacaagaccttccgta +ctacgattactgacggtgcccaattggaggcaaatggccc------------------------cgagcagt +atgtcctttcatttgacgaagcccaccagtgtatgggcgccgggccgcacagccttgtgtatgagcttaccc +ccagtgggctgcaagttcgggtctcatct-------aacggtctagattgtatggcagtcttcccc---cct +gggagggccccgagcgctggggccgcagaggttactgccttttgcagcgccttgtatcgatacaacaggacc +atccagcggcactcgattgttggcgggctatggttgcacccagaggggttgctgggcctttttccacctttc +tccccgggtcacttttgggaatcgactaatccgttctgtggcgaggggaccctttacactagaacctggtca +acatccggcttctctagtgatttctcgccgcctgaggcgaccgccggcgtaccccctcctgttgac------ +-ctgccttccaaatcggctccccttggggttgccgc-----------------tcaggtcct---------- +---------accgccacct---------------------------------------------tctgtggg +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------------ggtctactggcccaccta-- +-tagacgcgcccgaa-------------------------------------cccactgcctataagccacc +ggcgcaacc--------------------------------------tccggttcgtaaccgtcgcc----- +-------------------ttctctacatctatccagatggtgccaaggtttatgcggggtctttgtttgag +tctgactgtgactggccggtcaacgcgtctaatcccgggcatcgcccgggcggcggcctctgtcatgccttt +taccaacgtttcccccagtctt------tcgaccataccaagtttattatgcgggatgg---gcttgctgct +tacaccctttcaccccgtcccatcattcatgcagtcgcccctgattatagagttgctcataaccctaagagg +ttggaggcagcataccgcgagacctgctctcgccgtggtacagccgcttacccgctgttgggctcgggtatt +taccaggtccctgtaggcccgagctttgatgcttgggagcgaaaccatcgacccggcgatgaactctacctc +acagatcccgcggcagct-------------------------------------------------tggtt +cgaggccaataagccggctcggcctcccacgcctatagttcatgacatggccccagctgatcaccccgtagc +cggggccggcccaccacctcaggccaatactagtccggcactgcccgccctgactataacagaggacgcggc +ta------------ggacggccaaccttgccttggaaatcg------------actccaggaccgagctagg +ccgtgcctgc---accggttgtgtcgttaaccccggagttgttcgataccgattcactgcaggcgtccctgg +gtccggtaaatcaaggtccatacagcagggtgatgttgatgtggtggttgtgcctacacgcgagctgcgtaa +tagctggcgtcgccgcaggtttgctgcgtttacaccccactcggccgctcgtgtcaccagcggtcggcgtgt +tgtaatcgatgaggcaccatcccttccgccccacctgcttttattgcatatgcagcgtgcttcgtcggtgca +tcttcttggcgacccgaatcagattcccgcgattgattttgagcatgctggccttgtccctgcaatccgtcc +tgagctcgctcccaccagctggtggcatgtcacgcatcggtgccctgcggatgtttgtgagcttatacgcgg +ggcgtaccctaagatccagactaccagccgtgtgctaaggtctttgttctggggtgac------ccccccgt +tggccagaagttggttttcacgcaagccgcaaaggcagccaatcctggtgcaataaccgttcatgaggctca +gggggccacattcactgagaccaccatcattgcgacggcagatgcgagaggcctcattcagtcgtctcgggc +gcatgccattgccgcgcttacccgacacacagagaaatgtgttatattggacgccccggggttattacgcga +ggtgggcatttcagatgtgatagttaataatttc------------------------------tttctagc +cggcg--gtgagattggccaccaccgtccttcagtcatacctcgcggtaaccctgatcgaaacctcgatat- +-----ccttcaggcattccctccctcttgtcagattagtgcctaccaccagctggctgaggagcttggccac +cggcccgcacctgtggctgctgtcttgccaccctgtcccgagctcgagcagggcttgctgtatatgccgcag +gagcttacagtgtccgacagcatcttagtttttgagctaactgatatagtccactgccgtatggctgctccc +agccagcggaaagccgttctttcgacgctcgttgggcgatacgggcgtcgaacaaggttgtatgaggccgct +cattctgacgtgcgtgagtcgcttatgaggtttatccccaccattggccctgtgcaggctacaacgtgcgag +ctctatgagctcgttgaggcgatggtggagaaaggccaggatgggtcagctgtcctcgagcccgacctttgt +agccgagatgtgtcccgaataacgttctttcagaaagactgtaataagtttacaactggtgagacgattgcc +cacggcaaagtgggccaggggatatcagcctggggcaagaccttctgtgccttgtttggcccctggttccgg +gccattgagaagcagatattagccctgcttccgcctaacatcttttatggtgatgcctatgaggactcagtg +ttctctgcggctgtcactggtgccgggtctagcatg---gtttttgagaacgatttttcggaattcgatagc +acccagaataacttctcact------------------cggccttgaatgcgtgattatggaagagtgtggt +atgccccagtggctaattagactgtaccatctggtacggtctgcctggatcttgcaggccccaaaggaatct +ctcaaagggttttggaagaagcactccggtgagcccggcacactactctggaacaccgtttggaacatggcg +gtcatagcccattgctacgagttccgtgatttcaaggtcgccgcgtttaaaggggacgactcggtggtcctc +tgtagtgattatcgccagagccgcttcgcggcggccttgattgcgggctgtgggctcaagcttaaggttgac +taccgccccgttgggctctatgccggagttgtggttgcccctggccttggaacgttgcccgatgtcgtccgg +ttcgccggtcggctgtcagaaaagaattggggtcccagccccgaaagggcggagcaattacgcttagccgtt +tgtgacttcttaagaaagttgacgaatgttgctcaggtgtgtgctgatgttgtgtctcgtg-------ttta +tggggtgagccctggccttgtacataaccttattggcatgttacaaactattgccgatggtaaagctcacta +tactgaaactgtgaagcctgtactagatctcacgaattctatagtgcagaggttggaatgaataacatgtc- +t----------------tttgcatcgctcatggg------------gtcaccatgcgctctggggctgtttt +gctgttgttcctcgtgtgtctgcctatgttgcccgcgc---------------------------------- +-caccgg------ccggtcagtcggctggcc------------gccgtcgtgggcg-gcgcggcagcggtcc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctattttcat---- +--------------ccaaccaaccccttcgccgctgacgttgacccacatcccgggtctggagcccgacccc +ggcagccaacccg---------------cccccttggcacctcttggcgtgacctgtccca----------- +------gcgcccccccgctgccccgcgccgtcgatctacccca---------actggggctgcgccgttgac +tgccgtttcacctgcacctgatacggcgcctgtcccagatgttgattcacgcggggctattctgcgccgtca +gtataatctttcaacttcgcccctaacttccactgttgctgcaggcactaaccttgttctgtacgctgcacc +gcttaaccccctcctgcctcttcaggacggcaccaatactcacatcatggcgaccgaggcatctaattatgc +ccaatatcgggttgttcgggcgacaatccgttatcgccctttggtgcccaatgcagttggtggctatgcaat +ttctatctccttctggccccaaaccaccaccacccccacttctgttgatatgaattcaatcacttctgctga +cgttcgaattcttgttcaacccggtttggcgtctgaacttgttataccgagtgagcgcctccactatcgcaa +ccaagg-tggcgctctgtggagacctctggtgtgcc---gagagaggccacttccgggcttgtcatgctttg +c-tccatggctcccctgt-aattcatatactaataccccttatacaggtgcgctggggcttcttgactttgc +gcttgagattgagttccggaatttgactccggggaacactaacacccgagtctcccggtataccagtactgc +tcgccatcgtttgcgccgcggcgctgacgggaccgccgaactcacgactacggctgcaacacggtttatgaa +agaccttcatttca---ccggcatgaat---ggggtcggtgagattggccgcggtatagccctgacgctgtt +taacttagctgatacacttcttggtggcttgccgacagaattaatttcgtcggctgggggtcaggtattcta +ctcccgccccgtcgtctcagccaatggcgagccggctgtcaagttgtatacaccagttgagaacgcgcagca +agataaggggatcgcgttacctcatgacatcgatcttggtgattcccgcgttgttctccaggactatgataa +tcaacatgagcaggaccggcctactccgtcaccggccccctcccgccctttttccgtcctacgcgctaatga +tgtgttgtggctttc-----------------------------actgaccgctgcagagtatgac------ +caaactacttatggctcgtcaactaaccctatgtatgtttcagacactgtgacatttgt---caatgtggca +acaggtgcccaggccgtcgcccgctctcttgattggtctaaagttactctggacgggcggccgcttaccacc +at-----ccagcagcactctaagatgttttatgtcc-tccctttgcgtggtaagctttccttctgggaggct +ggcaccaccaag--gctggttacccatacaattacaacaccactgccagtgaccagattttgattgaaaatg +cggccgaccat------cgtgtcgctgt-ttctacttacaccgcgagtttggg--------------tgccg +gtcctgtgtccatctt-tgcagttggtgtgctcgccccgcattcagtcctagctgttcttgaggatactatt +gatt---------accccgctcgtg----ctcatacttttgatgattcctgccccgagtgccgtactc---t +cggcctgcagggctgtgcttttcaatc--------tactgttgctgagcttcaacgcct------------- +--------taagatgaaggtgggtaaaacccgggagttttaattaa-tt----ct-tgct----------gt +atct-tcct-------tt-tacg-ctgat---tgt-gt--------------------tatt-t-------t +ttattttt----gcg----------------ttccgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------aaaaaa------------------------ +------------------------------------------------------------------------ +----------- +>FJ653660.1/17216/1-7216 |Hepatitis E virus isolate CU001, complete genome +---------------------------------------------------------------ttcgatgc- +---catggaggcccaccagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggttcggccgttcctatcccgcattcaaactgagatcct +tatcaacttgatgcaaccccggcagcttgtgttccgacctgaagtcctctggaaccacccgatccagcgagt +catacacaatgagctggagcaata---ctgccgagccc-gcgctggtcgttgtctcgaggtgggcgctcacc +cgagatccatcaatgataatcccaatgtcctgcaccggtgctttctccgcccggttgggagagacgtccagc +gctggtattctgcccccacccgtggtcccgcggccaattgccgccgttctgcactacgtggcttgccccctg +tcgaccgcacatactgcttcgatgggttctcccgctgcgccttcgccgctgagaccgggatcgctttatact +cactacatgacctgtggccatcggacgttgcggaggctatggcccgccacgggatgacgcgcttgtatgctg +ccctccatcta-ccccctgaggtcctgttgccacgtggtacttatcataagacttcctaccttctgattcac +gacggcaatcgtgccgtcgtgacttatgagggggatactagtgcaggctataaccatgatgtgtccatactt +cgtgcatggatccgcaccactaaaatagttggtgatcatccactggtgatagagagggttcgtgccatcggc +tgccattttgtgttactccttactgcagcccctgagccatccccaatgccttatgtcccctaccctcgttca +acagaggtgtatgttagatccatatttggtcctggt---------gggtcaccttctcttttcccgtcagcc +t----------gctctaccaaatcta-catttcatgctgtaccagttcatatctgggaccggcttatgcttt +ttggtgccaccttagatgatcaggccttctgttgctcgcggcttatgacctatcttcgtgggattagttata +aagtgaccgttggcgcactcgtcgccaacgagggctggaaagcctcggaggatgcgcttactgctgtgatta +ctgcagcgtatttgactatttgccaccagcgctacctacgaacacaggccatttctaaaggcatgcgccgcc +tagaagttgagcacgcccaaaagttcatcacaaggttatatagctggctatttgagaaatc---------ag +gccgtgattacatccccggtcgccagctccagttttatgcacagtgccgccgttggctctcggctggcttcc +atctggaccctagggtccttgttttcgacgaagcggtcccctgc---cgttgccggagctttttaaagaa-- +----ggttgccggaaaattttgttgttttatgaaatggttggggcagga------gtgtacctgttttctgg +----------------agccagcggaaggcctggttggtgactgtggc--------catgataacgaggcct +atgaagggtccgaggtggaccccgccgagcctgcccacctcgatgtttccgggacctacgcggtccacggcc +gtcaactcgaggctttatatagagcacttaatatccctgacgacattgcagctcgtgcgtcacgtctgacgg +ctactgtggaacttgccgccagcccaggccgacttgagtgccgtactgtgcttgggaataagatctttcgta +catcaataactgatggcgcccacctcgaagccaacggccc------------------------cgagcagt +acgtcttgacattcgacgattctcgccaggcaatgggggctgggcctcacagcctcacgtatgaacttgtcc +ccgccggtctgcaggttaaaatatcttct-------aatggcttggattgtaccgctatattcccc---cct +ggtggggcgccaagcgctgcgccaggtgaagtggcggctttctgcagtgccctatacaggtacaatagggtc +acccagcgccattcactgaccggcgggctgtggctgcaccctgaggggctccttggcctgttccctcctttt +tccccggggcatctctgggagtctgcaaatcccttttgcggtgagagcacactttatacacgaacctggtct +acatccggtttttctagtgacttctccccacctgaggcggtttatgtcgccccagctcctgacat----ggc +actgccctcgggcgccccctcgtcagctggtgatgt-----------------ctgggcatt---------- +---------cccaccgccc----tccgaggggt--------------ctgcagtagttccaccacccgagat +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttagtaagccagccagcccacttagt +ctcactatacctagg-------------------------------------ccccctgtccgtaagccgcc +cacaccacc--------------------------------------accgacccgcactcgccggc----- +-------------------tcctctatacatatcctgatggggccaaggtgtatgcgggctctttgtttgag +tcagactgtgactggctggttaatgcatctaaccctggccaccgccccggtgggggcctttgccatgcattt +taccagcgctttcccgagtcgt------tccacccgactgactttgttatgcgtgaagg---cctcgccgca +tacactttgagcccgcgtcctatcattcatgctgtggcccctgactacagggttgagcagaatcccaagagg +ctggaggcggcataccgtgagacctgctcccgcctcggcacagctgcttacccgttattagggtcggggatt +tatcaggtccctgtgggcttaagcttcgacgcctgggagcgtaaccaccgcccaggcgatgaactttacctc +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccttaacaattactgaggacaccgc +cc------------gtacagctaaccttgcacttgagattg------------actccgctactgaggtagg +tcgcgcttgc---gctggctgtactattaatcctgggattgtccattatcagttcaccgccggggttcctgg +ctccggaaagtctaggtccatacagcagggggatgttgatgttgtggtcgtgccaacccgtgagctccgcaa +cagttggcgacgccgcggctttgctgctttcacaccccatacagcagctcgtgtcactgccggccggcgtgt +ggtgatagatgaggcaccttcgctaccaccgcacctgctgttgctccatatgcagcgagcctcatcggtcca +tcttcttggcgaccccaaccagatcccagctatagattttgagcacgccggtttggtcccagcgatccgccc +tgagcttgctcccactagttggtggcacgtcacccatcgctgccccgctgatgtttgtgagctcatacgcgg +ggcttacccaaagattcagacaaccagccgcgtgttacgatctttgttttggaacgag------cctgcggt +aggccagaagctggtcttcacgcaggcggccaaggcggccaaccccggtgcaattaccgttcacgaggccca +gggcgccacattcacggagactaccatcatagccacggctgatgccaggggtcttatccaatcttctcgtgc +acatgccatcgttgcacttactcgccatacggaaaaatgtgtcattcttgatgcccctggcctactgcgtga +ggtcggcatttctgatataattgttaataacttt------------------------------ttcctggc +tggtg--gtgaagtcggccaccatcgcccctccaccatacctcgtggcaacccagaccagaacttagacac- +-----cctacgagctttccctccatcctgccaaattagtgcctaccaccagctggctgaggagctgggccac +cggccggccccagtagccgccgtcctgcccccttgccctgagcttgagcaaggactactctacatgccgcag +gagcttacggtgtccgatagcgtcctaatttttgaactcacggacatagtccattgtcgtatggccgccccc +agccaacgtaaggcggtcctttcgacgcttgtcggtaggtatggccgccgaacgaagctatatgaagcggcc +cattctgatgttcgcgagtctttagggaggtttatccctactatcggaccggtccaggctaccacgtgcgag +ctatatgagctggttgaggctatggttgagaagggccaggacggttccgccgtgctcgaacttgacctctgc +agccgtgatgtctcgcgtattacattctttcagaaagattgtaataaattcacaacaggtgagaccatcgcc +cacggtaaggtgggccagggcatatcagcttggagtaagaccttttgtgccttattcggcccgtggttccgt +gctattgagaaggagattctggctctgctcccacctaacgttttctatggcgatgcttatgaggagtcagtg +ttctctgcagccatttccggagccggctctagtatg---gtttttgagaacgacttttccgagtttgatagc +acccaaaacaatttctctct------------------cggccttgagtgtgttattatggaggagtgtggc +atgccccagtggcttatccgactgtatcatttagttagatcagcctggaccctgcaagccccgaaagagtct +ctgaaaggtttttggaagaagcattccggcgaacccggcactctcctttggaacaccgtctggaacatggcg +attatagcacactgctacgagttccgtgacctgagggtggcagcgttcaaaggggatgattcagtggttctt +tgcagcgactaccgccagagccgcaatgcagccaccctgattgccggttgtgggttgaaattgaaggttgat +taccggcctataggtttgtatgccggcgttgtcgtggccccgggcctcggtgcacttcctgatgttgtccgg +tttgccggccgattatctgagaagaactggggcccgggccccgagcgcgccgaacagctgcgcctagcggtt +tgtgattttctccgagggctgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggggttagccccgggctggtgcataaccttattggcatgctacagactattgctgatggaaaggcccactt +cactgagactgtcaagcctgtgttggatcttacaaattccatcatacagaggttggaatgaataacatgtt- +t----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgtttt +gctgttgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaacccggggctggagctcgccctc +gacagccggcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgcctcccgccgtcgatctgcccca---------actggggctgcgccgttaac +tgctgtttcaccggcgcctgatacggccccagtccctgatgttgattcccgtggcgctattttgcgccgcca +gtataacttgtctacttcccctttaacttcatctgttgcttctgggactaatctcgtcttgtatgccacccc +gcttaaccctcttctacccctccaagacggcaccaatactcacatcatggcgactgaggcgtctaattacgc +tcagtatcgggttgttcgggctacaatccgctatcgccccttggtcccgaatgccgtcggcggttatgcaat +ttctatttctttctggcctcagactacaaccacgcccacctctgttgatatgaattccattacctccactga +tgttaggattttagttcagcctggcatagcctctgagctggtcatcccgagtgagcgtcttcactaccgtaa +tcaaggttggcgttcagttgagacatcgggtgtggccgaggaggaggcgacatccggcttggttatgctttg +catccatggttcccctgttaactcttatactaacacgccctatactggggcgttggggctcctcgactttgc +actcgagcttgaatttagaaatctgacccccgggaacactaacacccgtgtgtcccgttacactagcacagc +ccgacaccgtttgcgccgtggtgccgacgggacagccgagcttacgaccactgcagccacacgttttatgaa +ggacttgcatttca---ccgggacaaat---ggtgttggcgaggtaggccgtggcatagccctaacactatt +taatcttgctgatacacttctcggtgggttgccgacagaattgatttcgtcggctggaggtcaactgtttta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggcattgctataccgcacgatatagacttaggggattcccgtgtggttatacaagactatgacaa +ccaacatgaacaggaccggcctaccccgtcgccggccccgtcccgccctttttcagtccttcgagccaatga +tgtcctgtggctctc-----------------------------cttgaccgcggctgaatatgat------ +cagactacttacggctcgtcgaccaatcctatgtatgtttcagacactgttacatttgt---taatgtggcg +acaggcgcccaggctgttgcccgttcccttgattggtctaaggtcactttggatggccggccacttactact +at-----tcagcagtactccaagacattttatgtgc-tgccgcttcgtggtaagctctccttttgggaggct +ggcacgactaag--gccggttatccttataattataacactactgctagtgaccagattttgattgagaatg +cagctggtcac------cgtgttgccat-atccacatatactaccagtcttgg--------------tgctg +gccctgtgtcagtttc-tgcggtcggtgttcttgcaccacactctgctttagctgtgcttgaagatactatt +gact---------atcctgcccgtg----cccatactttcgatgatttctgccctgagtgccgtaatc---t +cggcttgcagggctgtgcttttcagtc--------tactgttgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----tc-cccc-ttt------gt +gccc-cct--------tc-tgaa-cc-tt----gc-cc-tgt----------------tatt-t-------c +ttttttct----gcg----------------tttcgcgctccctg---------------------gaa--- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>FJ763142.1/17260/1-7260 |Hepatitis E virus isolate KNIHhHEV4, complete genome +----------------------------gcagacca-cgtatg-------------t-----ggtcgacgc- +---catggaggcccatcagttcataaaggctcctggcgtcactacagctattgag---caggcagctctagc +agcggccaactccgccttggcgaatgctgtggtggttcggccctttttatcccgcctacaaacagagatact +aattaatctgatgcagccccggcagcttgttttccggcctgaggttttgtggaaccaccctatccaacgtgt +gatccataatgagctcgaacaata---ctgtcgagctc-gtgccggccgctgccttgaagtgggcgcccacc +cacgttcaattaacgacaaccccaatgttttgcaccgttgttttctcaaaccggttggtcgtgatgttcagc +ggtggtatactgctcccacccgtggtcctgcggcaaattgtcgccggtctgctctccgtgggctcccacctg +tcgaccgcacatactgttttgacggcttctccggctgcacttttgccgctgagacaggtattgctctttact +cactgcatgacctatggcccgctgatgtcgctgaggcgatggcccgccatgggatgacccggctctatgcag +cccttcatctc-ccccctgaagtgctactaccccctggcacatatcatactacctcatatcttttgatccat +gatggggaccgtgcagtgattacgtacgagggggactctagtgcgggatataatcatgatgtttctattttg +cgggcatggatccgtaccaccaaggtcaccggtgaccacccgctggtgattgagcgagtccgagcggtgggg +tgtcattttgtgctcctccttacagccgctcccgaaccatcgccgatgccctatgttccataccctcgctcg +accgaggtctatgttcggtctatcttcggtcctggt---------ggctcgccgtcccttttcccatctgcc +t----------gctctactaagtcaa-catttcatgccgtccccgtgcacatatgggataggcttatgcttt +ttggtgcaactcttgatgatcaagccttttgctgttccaggctcatgacgtacctccgtggcattagctata +aggtcacggtgggtgctctcgttgccaacgagggctggaatgcctctgaggatgcgctgaccgctgtaatca +ctgcggcttacctcaccatttgccaccaaaggtaccttcgtacgcaggccatctcgaaggggatgaagaggc +tggagcttgagcatgcgcagaagttcataacacgcctttacagttggttatttgaaaagtc---------cg +ggcgtgactatatccccggccgtcaactgcagttttatgctcagtgccgccggtggttatctgcaggcttcc +accttgaccctcgtgtgcttgtatttgatgaagccgccccctgc---cgctgtcggagcttcctccgtaa-- +----agtcgctcataagttctgctgctttatgcggtggttgggtcaaga------ctgcacctgctttctcc +----------------agcccattgaagggagggtcggtgaacaaggt--------tatgataatgaggcgt +ttgaggggtcggatgtcgaccctgctgaggaggctaccgtgagcatctccggttcatatattgttactggcc +accagctgcagcctttataccgagcacttggcataccatctgatcttgccgcacgtgctggccggcttgctg +ccaccgttgaggtttcagatgctgacggtcgcctcacctgtaagaccattttgggtaataagacctttttaa +cggtgtttaccgatggtgcccagctggaggccaacggccc------------------------agagcagt +acgttctatcatttgatctggctaaacaaactatggctgctggcccgcatagtcttagctacactttaacat +ctgcaggccttgaagtgcatattatttct-------gccgggcttgactgtaaggctgtcttcccg---cct +ggtgtcgcagccccctccgctcctggggaagtgtccgcgttttgttcagctctttacaggtttaaccgctgt +gtacagcggcattcccttattggaggtttgtggtactatcctgagagcttagtcggcctgtttccaccgttc +tcccccggtcatagttgggagtctgccaatcccttctgcggtgagagcaccctttacactcgcacttggtct +gtatcgggcttttccagctgtttctcccccttcgagccctgcgccccggagccgccgccctcaagt---ggc +atcgaagc----------acctgctgttgttgatac-ttcacca---------ctggtcccc-----cctgt +gcaggctcagcccccaacc----cccgaccagg---tag--------------------cgcctccgtcaga +cttgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttgatggtggtgtccgccttgacctg +actagcgcctctgcg---------------gag-------------------cccccggcgcccgtgcagtc +tgtaaccca--------------------------------------gc---ccggaccccgtcggcg---- +-----------------actgctccatacctaccctgacggctcgaaggtgtacgccggatccctttttgag +tccgagtgcacatggctggttaatgcctctaacccgggccaccgccctggcggcggcctttgccatgcattt +taccagcgattcccagagtcct------tcgaccctgctgagttcatcatgtccgacgg---gttcgcggcc +tatactctgacaccgcgacccataatccatgctgtcgcccctgactaccgggttgaacataaccctaagaga +cttgaggccgcttaccgggagacgtgctcccgtcgtgggacagcagcctaccctctgctcggcgctggtata +tacaaggtccctgtcgggctgagcttcgatgcctgggaacgtaaccatcgacccggggacgagctgtacttg +accgagccagcaatagcc-------------------------------------------------tggtt +cgaggctaaccgacccaccct--------------------------------------------------- +------------------------------------------ccccgctttgactatcactgaggacacggc +gc------------gtacggcgaacctagcgttggagctgg------------atgcggctactgaggtcgg +ccgggcatgc---gctggctgtcgggttgaacccggtgtagtccattatcagttcacagccggcgtccctgg +ctccggtaaatcgcggtcaatccaacagggagatgtggatgtaatagtggtaccaacccgtgagttgcgcaa +ttcatggcgccgccgcgggtttgctgcttacacacctcatactgcagcccgtgttacccgcggccgtagagt +ggtcatcgacgaggccccctcgcttccaccgcacttgctcctgctgcatatgcagcgggcctcgtcggttca +tctccttggtgatcctaatcaaatccccgctattgattttgaacatgccggtctcgttccagcgatccggcc +tgagttggtcccaactaaatggtggtatcttacccataggtgccctgcggatgtctgtgagttgatccgcgg +cgcatatccaaagattcaaaccgcaagccgtgtcctccgttctttgttttggggggag------ccccctgt +gggccagaagcttgtatttacccaagcggctaaagctgctaaccctggtgcgattacagtacatgaagccca +gggcgcgacatttactgagactacaattatcgccacagcggatgctcgcgggctgattcagtcctctagggc +tcatgccattgtagccctgacccgtcacacggagaaatgcgtggtggtcgatgccccagggcttcttcgcga +ggtaggtatctctgatgccattgttaataacttc------------------------------ttcctctc +tggcg--gtgagattggccagcatcgcccgtcagtggtaccccgtggcaccattagcagcaatgttgatac- +-----acttgacgcattccccccttcctgccagtttagcgcgtaccatcagctggccgaagagcttggccac +cgacccgcgccgattgccgccgttctgcccccctgcccggagcttgaacagggcttactttatatgcctcag +gagttaactacatcggatagcgttctcacctttgagctaacagacattgtgcactgccgcatggcggcaccc +agccagcgcaaggcagtcctgtcgacccttgttggtaggtacggccgccgtacgaagctgtatgaggctgcc +catacagatgtccgcgggtccttgaatcattttattcctgagcttggccctattaacgttaccacctgcgag +ctctatgagcttgtagaggccatggtagagaagggccaagacggctctgcagtcctggagcttgacctatgt +aatcgtgatgtgtcccgaataacctttttccagaaagactgcaacaaatttacgacaggtgagactatagcg +catggtaaagtcgggcagggcatatctgcatggagtaaaaccttctgcgccttattcggcccgtggttccgc +gctattgagaaagaaatcctggcagcgcttgcacccaatgtcttttatggtgatgcttatgaagatacagtc +ttggctgccgctgttgccggcgcccctagttgtaag---gtctttgagaacgacttttctgagtttgatagt +acccaaaataatttctcact------------------cgggcttgagtgtataatcatggaggagtgcggc +atgccacaatggatggtgcgactttaccaccttgtccgctccgcgtgggtcctgcaggctccaaaagagtcc +ctgcgcggcttctggaagaagcattctggtgagcctggcaccttgctgtggaataccgtctggaacatggcg +gttatagcgcactgttatgagtttcgtgaccttaaagttgcggcgtttaagggggatgattccgttgtactc +tgtagtgattatcggcagagtcgcaatgcggccgctttaattgccggctgtggactgaagcttaaggtggac +tttagacctattgggctatatgctggtgttgttgtggctccgggtcttgggacccttccggatgttgtcagg +tttgctgggcggctttcagaaaagaactgggggccaggtctcgagagggcggagcagcttcggctggccgtc +tgtgacttcttgcgaaagttaacgaatgtggctcatgtttgtgttgatgttgtttcgcagg-------tcta +cggtgttagccccggtttggtacataacctaataggaatgcttcagaccattgcggatggcaaagcgcactt +cactgaaacgatcaaacctgttcttgaccttactaactctataatacatcgggtggaatgaataacatgttc +t----------------tttgctctgtgcatggcg---------atgccaccatgcgctctcgggctcttct +gtttctgttcctcctgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gtcgccgcgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgcatctgacattccagccgccgccggggctggagctcgccctc +gacagccagcccg---------------tccactcggttccgcttggcgcgaccaatccca----------- +------gcgccccgccgctcccgcccgtcgtcgatctacccca---------gctggggcttcgccgttgac +ggctgtggccccggcgcctgatactgccccggtccctgatgttgattcgcgtggtgctatattgcgccgtca +gtataatctgtccacttccccacttacatccaccattgctaccggaactaatcttgtgctatatgccgcccc +gcttagccctctactcccacttcaagatggtaccaacactcatattatggctactgaggcttctaactatgc +tcagtaccgtgttgtccgcgccaccattcggtaccgccctctggtgccgaacgctgttggcgggtatgctat +atctatctccttctggccccagacgacgaccaccccgacgtccgtggacatgaattccatcacctccaccga +tgtccgtattcttgttcaacctggtatagcctccgagttggtgatccctagtgagcgcctgcactatcgcaa +ccagggctggcgctcagttgagacctctggtgtcgctgaggaggaggctacttccggtctcgttatgctctg +cattcatgggtcacctgtgaactcttacactaatacaccttatactggtgctcttggcctgcttgatttcgc +gcttgagcttgagtttcgtaatttgacacctggcaacacaaatacgcgcgtctctcgttattcgagtagtgc +gcgccataaattgcgccgaggggccgatggcactgctgagttaactactactgccgctacacggtttatgaa +ggatcttcatttta---cagggactaat---ggtgttggtgaggttggccgtgggatagcgcttaccttgtt +taaccttgctgacacacttctcggcgggcttccgacagaattgatttcgtcggctggtggccagctgtttta +ctctcgccccgtcgtctcagccaatggcgagccgacagtgaaactttacacctcagttgagaacgctcagca +ggataaggggattgctatcccacatgacattgaccttggtgagtcccgtgttgttatccaggactatgacaa +tcaacatgagcaagatcgccctactccctcccctgctccttctcgccccttctctgtgcttcgtgctaatga +tgtactctggctttc-----------------------------gctcacggctgctgagtatgat------ +cagactacttatggctcctctaccaaccctatgtatgtttctgatactgtgacgtttgt---caatgtggcc +accggtgcccagggggtttcgcgctctctggactggtctaaggtcacccttgatgggcgcccactaattact +at-----tcagcaatactctaagactttctatgttc-tgcctcttcgtggtaagctttctttttgggaggcg +ggtaccactaag--gccggttatccttataattataatactactgctagtgatcagattctgattgagaatg +cagccggtcat------cgagtctgcat-ctctacttacaccactaatctggg--------------ttctg +ggcctgtttctatatc-tgctgtcggtgtcctcgcacctcactctgtactggctgctttagaggacactgtc +gact---------atcctgctcgtg----ctcatacttttgatgacttttgccctgagtgccgtgcgc---t +cggcctccagggttgtgcttttcaatc--------gactgttgttgagttgcagcgtct------------- +--------taaaatgaaggtgggtaaaacccgggagtattgattta-tt----ct-gctt----------gt +gcct-ccc--------tt------ctagc--tcta-gt-ggttt--------------agta-g-------a +catcagct----gcg----------------aaacgcgctccgtg---------------------gaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>EU375463.1/17245/1-7245 |Hepatitis E virus isolate ThaiswHEV07, complete genome +-------------------------ggca--gacca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccaccagtttatcaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaattctgccctggcgaatgctgtggtggttcggccgtttttatcccgtgttcagactgagatcct +tatcaatctgatgcaaccccggcagcttgtgtttcggcctgaggtcctctggaaccatccaatccagcgagt +catacataatgagctggagcaata---ctgccgagccc-gcgctggtcgctgtcttgaggtgggcgctcacc +caaggtccattaatgataaccctaatgtcctgcaccggtgctttctccgcccggttgggagagacgtccagc +gctggtattctgcccccactcgtggtcccgcggccaattgccgccgatctgcgctacgcggtttgccccctg +tcgatcgcacatactgcttcgacgggttttcccgctgcgcctttgccgctgagaccgggattgctttatatt +cactgcatgacctttggccttcggatgttgcggaggctatggcccgccatgggatgacgcgcttgtatgccg +ctctccattta-ccccctgaggtcctgttaccacctggcacttaccacacaacctcctatcttttgattcac +gacggcaatcgtgccgtcattacttatgagggggataccagtgcgggctataaccatgatgtgtctatactt +cgtgcatggatccgcaccactaaaataactggtgatcacccactggtaatagagagggtccgcgctatcggc +tgtcattttgtgttactccttactgcagccccagagccgtccccaatgccttatgtcccttaccctcgttca +acagaggtgtatgttagatctatatttggtcctggt---------gggtcgccttccctttttccatcagcc +t----------gctctaccaagtcca-ctttccatgccgtaccggttcatatttgggaccggctcatgcttt +ttggtgccaccctagatgaccaggccttctgctgctcgcggcttatgacctatctccgcggcattagctata +aagtgaccgttggtgcactcgtcgccaacgagggctggaacgcctcagaggatgcgcttaccgctgtgatta +ctgcagcgtatctgactatctgccatcagcgctacctacgaacacaggccatttctaaaggtatgcgccgtt +tagaggtcgagcatgcccagaagtttattacaaggttatatagctggttgtttgaaaaatc---------ag +gtcgtgactacatccccggccgtcagctccagttttatgcacagtgccgccgttggctctcggctggttttc +atctggaccctagagttcttgtttttgatgaggcggtcccctgc---cgctgccggagcttcttaaagaa-- +----ggctgccggaaaattctgttgtttcatgaaatggttgggacagga------gtgcacctgtttcctgg +----------------agccagcggaaggtctggttggtgactgtggt--------catgataacgaggcct +atgaggggtccgaggtggaccccgccgagcccgcccaccttgatgtttccgggacctatgcggttcacggcc +gtcagcttgaggctctatatagagctcttaatattcccgacgatattgcggctcgcgcatcacgcctgacgg +ctaccgtggaacttgccgccagcccgggccggctcgagtgccgtacggtgcttgggaataagatcttccgca +cgtcaataactgacggtgcccacctcgaagccaacggccc------------------------cgagcagt +acgtcttgacatttgatgattctcgccaggcgatgggggctgggcctcacagccttacgtatgcgcttgtcc +ctgccggcctgcaggttaaaatatcttgt-------aatggcttggattgtaccgcaacattcccc---cct +ggtggggcgccaagcgctgcgccgggtgaagtggcggctttctgcagcgccctatacaggcacaataggtgc +acccagcgccactcgctgaccggtgggttgtggctgcaccccgaggggctccttggcctgttcccccctttc +tccccggggcaccattgggagtctgcaaatcccttctgtggtgagagcacactttatacacgaacttggtct +acatctggcttctctagtgacttctccccacctgaggcggctcacgccgccccagtctgtgacct----tgg +accaccgtcgggaaccccctcgtccgctggcgacgt-----------------ctggatact---------- +---------cccaccgccc----tccgaggggt--------------cggtaattgctccaccacccgagac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtaagccagctaacccgcccagc +cttattacacctagg-------------------------------------ccccctgtccgtaagccgcc +tacaccacc--------------------------------------accaacccgcactcgccggc----- +-------------------tcctttatacataccctgatggggccaaggtgtatgcaggctctctgtttgag +tcagattgtgactggctggttaatgcatctaatcctggccaccgccccggcggtggtctttgccatgcattt +taccagcgcttcccggagtcgt------tccatccgactgatttcgttatgcgtgaagg---tctcgccgca +tacactttgagcccgcgtccgattattcatgctgtggctcctgactatagggttgagcagaatcccaagaga +ctagaggcggcatatcgtgagacctgttcccgcctcggaacagctgcttacccgctactagggtcggggatt +taccaggtccctgtaggcttaagcttcgacgcctgggagcgtaaccatcgcccaggcgatgagctttacctt +actgagccagctgccgcc-------------------------------------------------tggtt +tgaggctaataagccgaccca--------------------------------------------------- +------------------------------------------gccggccctaacaattactgaggacaccgc +cc------------gcacagctaaccttgcgcttgagattg------------actccgctactgaggtcgg +tcgtgcttgc---gctggctgtattattaaccccggtattgtccattatcagtttaccgccggtgttcctgg +ctccggaaagtccaggtctatacagcaaggggatgttgatgttgtggtcgtgccaactcgtgagctccgcaa +cagttggcgacgccgcggtttcgctgcttttacacctcacacagcagctcgtgttactgccggccggcgtgt +ggtgatagatgaggcaccttcgctaccaccgcacttgctgctgctccatatgcagcgggcctcatcggtcca +tctccttggtgaccccaaccagattcctgctattgattttgagcacgccggtttggtcccagcgattcgccc +tgagcttgccccaactagctggtggcatgtcacccaccgctgtcccgccgatgtttgtgagctcatacgcgg +ggcttacccaaagattcagacgaccagccgtgtgttgcgatctctattctggaatgag------cctgcggt +aggtcagaagctggtcttcacgcaagcagccaaggcggccaaccccggtgcaatcactgttcatgaggccca +gggcgccacatttacggagaccaccatcatagccacagccgatgccagaggccttatccaatcttctcgtgc +acacgctatcgttgcactcactcgacatacggagaaatgcgtcatccttgatgcccctggcttactgcgtga +ggtcggtatttctgacataattgttaacaacttt------------------------------ttcctggc +tggtg--gtgaattgggccaccaccgcccttctaccataccccgtggcaacccagaccagaacttagacat- +-----tctacgagcgttccctccttcctgccaaattagtgcctaccaccagctggctgaggagctgggccac +cggccggccccagtggccgccgtcctgcccccctgccctgagctcgaacaagggctgctctacatgccgcag +gagcttacagtgtccgatagtgtcttaatttttgaactcacggacatagttcattgtcgtatggctgccccc +agtcaacgcaaggcggtcctttcgacgctcgtcggtaggtacggccgccgaacaaagctgtatgaagcggcc +cattctgatgttcgtgagtctttagggaggtttatccctactatcgggccggtccaggctaccacgtgcgag +ctatacgagctggtcgaggctatggttgagaagggccaggacggctccgccgtgctcgagcttgatctctgt +agccgtgatgtctcgcgcattacattcttccagaaggactgtaataaattcacaacaggtgagactatcgcc +cacggtaaggtgggccaaggcatatcggcttggagtaaaactttctgtgctttattcggcccgtggttccgt +gccatagagaaggagattctggctctgcttccacccaatgtcttttatggcgatgcctatgatgagtcagtg +ttttctgcagccatttctggggccgactccagtatg---gtttttgagaacgatttttctgagtttgatagt +acccaaaacaatttttctct------------------cggccttgagtgtgttattatggaggaatgtggc +atgccccaatggcttatccgattgtatcatttagttagatcagcctggaccctgcaagccccgaaagagtct +ctgaaaggtttttggaagaaacattccggtgaacctggcactctcctttggaacaccgtctggaatatggcg +atcatagcacactgctatgaatttcgtgacctgagagtggcagcgttcaaaggggatgattcagtggtcctc +tgtagtgattaccgtcagagccgcaatgcagccaccctgatagccggttgtggattgaaactgaaggttgac +taccggcctataggcttgtatgccggcgttgtcgtggccccgggcctcggtgcactccctgatgttgtccgg +tttgctggccgactatctgagaagaactggggcccgggccccgagcgtgccgaacagttgcgcctagcggtt +tgtgacttcctccgagggttgacgaatgttgcgcaggtttgtgttgacgttgtgtcccgtg-------ttta +tggggttagccccgggttggtgcataaccttattggcatgctacagaccattgctgatggaaaggcccactt +tactgagactgttaagcctgtgttggatctgacaaattctatcatacagaggttggaatgaataacatgtt- +c----------------tgtgcatcgcccatggg------------atcgccatgcgccctagggctgttct +gttgctgttcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagtcgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtac +cggcagtg-gtttctggggtgacagg--gttgattctcagcccttcg----cactcccctatattcat---- +--------------ccaaccaaccccttcgccgccgatgtcgtatcacaatccggggctggagctcgccctc +gacagccgtcccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctgccccccgtcgtcgatctgcccca---------actggggctgcgccgttaac +tgctgtctcaccagcgcctgacacggccccagtccctgatgttgactctcgtggtgctatcttgcgccgcca +gtataatttgtccacctcccctctaacttcatctgttgcttctgggactaatcttgtcttgtatgctgcccc +gcttaatcccctcctgcctctccaagatggcaccaatactcacattatggcgactgaggcttccaattacgc +ccagtaccgggttgtccgggctacaatccgctaccgccctttggttccgaatgccgtcggtggttatgcaat +ctctatttccttctggcctcagactacaaccacacccacctctgttgatatgaattccattacctccactga +tgttaggattctagtccagcctggcatagcctctgagctggtcatcccgagtgagcgccttcactatcgtaa +ccaaggttggcgctcagttgagacatcgggtgtggccgaggaagaggcgacatcaggcctggttatgctttg +tatccatggttcccctgttaattcctataccaacacgccctataccggggcattggggcttcttgattttgc +actcgagcttgaatttagaaatttgacccccgggaacactaatacccgagtgtcccgctataccagcacagc +ccgacaccgtttgcgtcgtggtgccgatgggacagccgagcttacaaccactgcagccacacgttttatgaa +ggatttgcatttca---ccgggacaaat---ggtgttggtgaggtaggccgtggtatagccctaacgctatt +taatcttgctgatacacttctcggcgggctgccgacagaattgatttcgtcggctggaggtcaactgttcta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggcattgctataccacacgatatagacttaggggactcccgtgtggttatacaagactacgacaa +ccaacatgaacaagaccggcctaccccgtcgccggccccgtcccgccccttctcagtccttcgagccaatga +tgtcctctggatgtc-----------------------------tctgactgcagccgaatatgac------ +cagactacttacggctcgtcgaccaaccctatgtatgtttcagacactgtcacatttgt---taatgtggcg +acgggtgcccaggctgttgcccgttcccttgattggtccaaggtcactctggatggccggccacttactacc +at-----ccagcagtactccaagacattttacgtgc-tgccgcttcgtggtaagctttccttttgggaagcc +ggtacgactaag--gctggttacccttataattataataccactgctagtgaccaaatcttgatcgagaatg +cagccggtcat------cgtgttgccat-atctacctatactactagtctcgg--------------tgccg +gccctgtgtcggtttc-tgcggttggcgtccttgcgccgcattctgctttagctgtgcttgaagatactatt +gact---------atcctgcccgtg----cccacacttttgatgatttttgccctgagtgccgtaatc---t +tggcttgcagggctgtgccttccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggcaaaacccgggagtcttaattaa-tt----c---ccc-ttt------gt +gccc-cct--------tc-taaa-ct-tt----tc-tc-tgt----------------tgtt-t-------c +tttcttct----gcg----------------tttcgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaa---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>FJ527832.2/17255/1-7255 |Hepatitis E virus isolate SAASJDY5, complete genome +---------------------------ggcagacca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggtccggccgtttttgtctcgcgtacagacagagattct +tataaatttgatgcaaccccggcagttagttttccgccctgaggtgctttggaatcaccctattcagagagt +tatacacaatgaattggaacagta---ctgccgtgctc-gggctggtcgttgcttggaggttggagcccatc +cgagatctatcaatgacaaccccaatgttttgcatcggtgttttcttaggccggtcggtagggatgtccagc +gctggtactcagcccccacccgcggccctgcagctaactgccgccgctccgcgctacgtggtctcccccctg +tcgaccgcacctattgctttgatggattctcccgctgtgcttttgctgcagaaaccggtgtggccctttact +ctttgcatgatctttggccagccgatgttgcggaggccatggcccgccatgggatgacacgtctttatgccg +cacttcatctc-ccccctgaggtgctgttaccacccggcacctaccacacaacctcgtatcttctgattcac +gacggcaatcgtgctgttgtgacttatgagggtgacactagtgcaggctacaaccatgacgtctctatactc +cgtgcgtggatccgcacgactaaaatagttggtgaacacccgctggttatagagcgcgtgcgggctatcggg +tgtcattttgtgctgctgctcaccgcagcccccgagccgtcacctatgccttatgtcccttacccccgttcg +acggaagtgtacgttcgatctatatttggccctggc---------ggctccccgtctctgttcccatcagcc +t----------gctccacaaaatcta-cttttcatgccgtcccggttcatatctgggaccggctcatgctct +ttggcgccacattggatgaccaggcgttctgttgttcacggctcatgacatatctccgtggcattagctaca +aagtcaccgttggtgcgcttgttgctaatgagggttggaatgcctctgaggatgcccttactgcagtaatca +ccgcagcctacttgactatttgtcatcagcgctaccttcgtacccaggcaatatccaagggtatgcgccggt +tggaggttgagcacgcccagaagttcattacaaggctttacagctggctattcgagaagtc---------tg +gccgtgattatatccccggccgccagctccagttttatgctcagtgccggcggtggctatctgcaggtttcc +atctggaccctagagtgcttgtttttgatgagtcagtgccttgc---cgctgtaggactttcttaaagag-- +----ggccgctggtaaattctgctgcttcatgcggtggctaggacagga------atgcacttgcttcttgg +----------------agccagctgagggcttagttggcgaccaaggc--------catgataacgaggctt +acgagggttctgaagtcgacccggccgagcctgcacatcttgatgtctcggggacctatgccgttcatgggc +gtcagcttgaggccctttatcgggcacttaacatcccccatgacattgctgctcgagcagcccggcttacag +ctactgttgagctcgttgcaggtccagaccgtttggagtgccgcaccgtgcttgggaataagactttccgaa +cgacagttgtggacggtgcccaccttgaagctaatggccc------------------------tgaacaat +atgttttatcgtttgatgcttcccaccagtccatgggggccgggtcacatagcctcacttacgagctcacgc +ctgccggcttgcaggtaaggatttcatct-------aatggcctggattgcactgctacatttccc---cct +ggtggcgcccctagcgccgcgccgggagaggtagcggctttttgcagtgccctctacaggtataacagattc +acccagcggcattcgctaactggcggtctatggttacaccctgagggactgctgggcatcttccctcctttc +tctcccgggcatatttgggagtctgccaaccccttctgtggggaggggaccttgtacacccgcacctggtcc +acatctggtttttctagtgatttctcccctcctgaggcggccgcctttccaccggctgctgcccc----agg +gttgccct---gtcctactccacctgccagtgaaat-----------------ctgggtgct---------- +---------gccaccgccc----tctgaagggt--------------ctcaggtcgacgtggtatctgtccc +acctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgagcctgctggcccgcctggt +tccaccgaaccctta-------------------------------------ccccctgtgcgtaagccgcc +agtaccacc--------------------------------------gccttctcgcacccgccgcc----- +-------------------tcctttacacataccctgacggcgctaaggtgtatgcggggtcattgtttgag +tcagattgtgactggctggttaatgcctctaacccaggccaccgtcccgggggtggcctttgccacgctttc +taccagcgtttccccgaggcgt------tctacccaactgaatttattatgcgtgaggg---tcttgcagca +tataccctgaccccgcgccctataattcacgcggtggcccccgactatagggctgagcagaatccgaagagg +cttgaggcggcgtaccgagaaacttgctcccgtcgcggtactgctgcctatccgcttcttggctcaggtata +tatcaggtccctgttagtcttagttttgatgcttgggagcgcaaccaccgccccggtgatgaactctacctg +actgagcccgccgtaacc-------------------------------------------------tggtt +cgaagctaacaagccggcgca--------------------------------------------------- +------------------------------------------gccagcacttacgataacagaagacacagc +cc------------gtacagccaacctagcactagagatcg------------atgctaccacagaggtcgg +tcgcgcttgt---accggttgtactgttagccctggggttgtgcactatcagtttactgctggggtcccggg +ttcaggcaagtcgaggtctatacagcagggagatgttgatgttgtggttgttcccacccgggagctccgtaa +taactggcgccgctggggctttgcggccttcacacctcatacggcggcccgtgttactatgggccgccgtgt +tgtgatcgatgaggccccatcccttccaccgcacctgctg---ctacatatgcagcgggcctcatcggtcca +tctcctcggtgacccaaatcaaattcctgccatcgactttgagcacgctggcttagtccctgcaattcgccc +tgagcttgcaccaacaagctggtggcatgtcacgcaccgttgtccggccgatgtatgtgaactcatacgcgg +ggcttaccctaaaatccagaccacaagtcgtgtgctacgatccttgttttggaatgag------ccagctat +tggccagaaattggtctttacgcaggccgctaaagctgctaaccctggtgcgattacggtccatgaggccca +gggcgccacctttacggagaccacaattatagccacggctgacgccaggggtcttatccagtcatcccgtgc +tcatgctatagtggcacttacccgtcatacagagaagtgcgtcatcttagacgcccctggcctgttgcgtga +ggtcggcatatcagatgtaattgtcaacaatttt------------------------------tttcttgc +cggtg--gggaggtgggtcatcaccgcccctctgtgataccccgtggcaaccctgataagaaccttgacac- +-----cctacaggccttcccgccatcatgccagattagcgcctatcaccagctggctgaggaattgggccac +cgcccggctcctgttgctgccgttttgcccccttgtcctgagctcgagcagggcttgttatatatgccacaa +gagctcacagtgtccgatagtgtgctggttttcgagctcccggatatagtccactgccgtatggctgcccca +agtcagcggaaggctgttctttcaacgctcgtggggaggtatggccgtaagacgaagctgtatgaggcagct +cattcagacgtccgtgagtccctagccaggtttatccctactattgggcctgtccaggccaccacatgtgag +ctatatgaactggttgaggccatggtggagaagggccaggacggctctgccgtcttggagcttgatctatgt +aaccgtgacgtctcacgcattacattctttcagaaggattgtaataagtttacaactggtgagaccatcgcc +catggtaaggttggccagggcatatcggcctggagtaagaccttctgtgctctgtttggcccgtggttccgt +gccatcgagaaagaaatactggccctgctcccgcctaatatcctttacggtgacgcctatgaggagtcggtg +tttgctgctgctgtgtccggggcggggtcttgtatg---gtgtttgaaaatgacttttcggaatttgacagt +actcagaataatttttctct------------------cggccttgagtgtgtggtcatggaagagtgcggc +atgccccaatggttaatcaggttgtatcacttggtccgatcagcttggatattacaggcgccgaaggagtct +cttaaaggtttttggaagaagcactctggtgagcctggtaccctcctctggaatactgtttggaacatggca +atcatagcacattgctatgagttccgtgatttccgggttgctgcctttaggggtgatgattcggtggtcctc +tgtagtgactaccgacagagtcgtaatgcagcagccttaattgcaggctgcgggctcaaactgaaggttgat +tatcgacctattgggctgtatgctggtgtggtggtggcccctggcctaggaacattgcctgatgtagtgcgt +tttgctggtcggttatctgaaaagaattggggccccggcccagagcgtgctgagcagctgcgtcttgctgtt +tgtgattttcttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtatctcgtg-------ttta +tggagtcagtcccgggttggtacataacctcattggcatgttgcagaccattgccgatggcaaggcccattt +tacagagactattaaacctgtgcttgatcctacaaacccaatcatacatcgggtggaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------atcaccatgcgccctagggctgttct +gttgctgttcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgccgatgtcgtttcacaatccggggctggagctcgccctc +gacagccgccccg---------------cccccttggctccgcttggcgcgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgacctgcccca---------gctggggctgcgccgttgac +tgccgtatcgccagcacctgatacagcccctgtgcctgatgttgattcacgtggcgctattttgcgccggca +gtacaatttgtctacttccccgcttacgtcatctgttgcctcaggtactaatttggttctctatgctgcccc +gttgaaccctctgttaccccttcaggatggcaccaatacccatattatggccaccgaggcatctaattatgc +ccaataccgggtggttcgggctacgattcgttatcgcccgttggtgccaaatgctgttggcggttacgccat +ctctatctctttctggcctcaaacaactactacccctacttctgttgacatgaactctatcacctctactga +tgttagaatcctggtccagcctggcattgcctccgagctggtcatccccagtgagcgtcttcactaccgcaa +tcaaggttggcgctctgtcgagaccaccggagtggctgaggaggaggctacttctggcctggtaatgctttg +cattcatggctcccctgttaattcttatactaatacaccttacactggtgcactggggcttcttgattttgc +attagagcttgaatttaggaatttgacacctgggaacactaacactcgtgtgtcccgatacactagcacagc +ccgccatcggctgcgtcgtggtgccgacgggaccgctgagcttaccactacggcggccacgcgttttatgaa +agacctgcatttta---ctggtacgaat---ggggttggtgaggtgggccgaggtattgccctgacattgtt +caaccttgctgatacacttcttggcggtctgccgacagaattgatttcgtcggccgggggtcagttatttta +ctcccgccctgtcgtctcggccaatggcgagccgactgtgaagttgtacacatctgttgagaatgcgcagca +ggacaaaggcattaccatcccacacgatatagacctcggtgactcccgtgtggtcatccaggattatgacaa +ccagcatgagcaggatcggcctaccccgtcacccgccccctctcgccctttttcagtccttcgtgccaatga +tgtcttgtggctttc-----------------------------tctcaccgctgctgagtatgac------ +cagactacgtatgggtcctccaccaacccaatgtatgtctcggatacagtcacacttgt---taacgtggcc +actggtgctcaggctgttgcccgctcccttgactggtccaaggtgactctcgatggtcgcccccttactacc +at-----ccagcagtattctaagacattctatgtcc-ttccgcttcgcggcaagctgtctttctgggaggct +ggcacgactaaa--gccggttatccgtataactataacacaaccgctagtgatcaaattctaattgagaacg +cagctggccac------cgtgttgccat-ctctacttataccaccagcctggg--------------cgctg +gccctacctctatttc-tgcagtcggtgtgttagctccacactcggcccttgccgttctcgaggacaccatt +gatt---------accccgcccgtg----cccatacttttgatgatttttgtccggaatgtcgtgccc---t +cggtttgcagggttgcgctttccagtc--------cactattgctgagcttcagcccct------------- +--------taaaatgaaggtaggtaaaacccgggagtcctaattaa-tt----c--c--t-cct------gt +gccc-cct--------tc-gtag-t-cttctttgc-tt--------------------tatt-t-------c +tcttttct----gc----------------tttccgcgctccccg---------------------gacaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------aaaaaaaaaa-------------------- +------------------------------------------------------------------------ +----------- +>EU495148.1/17321/1-7321 |Hepatitis E virus isolate TLS25, complete genome +-----------------------gcag-----acca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgccatcgag---caggctgctctggc +tgcggccaattccgccttggcgaatgctgtggtggtccggccgtttttatctcgtgttcaaactgagatcct +tattaacctgatgcaaccccgacagcttgtgtttcggcctgaggtcctctggaaccatccgatccagcgagt +catacacaacgagctggagcagta---ctgccgagccc-gcgctggccgttgtcttgaggtgggcgctcacc +caagatccattaatgacaaccccaatgtcctacaccggtgctttctccgcccggttggaagagacgtccagc +gctggtactccgcccccacccgtggtccagcggccaattgtcgccgctctgcgctacgcggcctgccccctg +tcgatcgcacatattgttttgatgggttttcccgctgcgcctttgccgctgagaccggggtcgctttatact 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+----agttaccgggaaattttgttgttttatgaaatggctggggcagga------gtgtacctgttttctgg +----------------agccagcggaaggcctggtcggtgactgcggc--------cacgataatgaggcct +atgaagggtctgaggtggaccccgccgagcctgctcaccttgatgtttccgggacctatgcggtccacggcc +gtcagcttgaagctctatatagagcgcttaatatcccagatgacattgcggctcgtgcgtcacgcctgacgg +ctactgtggaacttgctgccagcccaggccgactcgagtgccgtacggtgcttgggaataagaccttccgca +catcaataactgacggtgcccatctcgaggccaacggtcc------------------------tgagcagt +atgtcttgacatttgatgattctcgccaggtgatgggggctgggccccacagccttacgtatgaacttgtcc +ctgccggtctgcaggtcaaaatatcttct-------aatggcttggattgtactgctgtattcccc---cct +ggtggggcgccaagcgctgcaccaggtgaagtggcggccttctgtagcgccctatacaggtataataggttc +acccagcgccattcgctgaccggtgggctgtggctacaccctgaggggctccttggcctgtttcctcctttc +tccccggggcatctctgggagtctgcaaaccccttttgcggtgaaagcacgctttacacacggacttggtcc +acatcaggtttctctagcgacttctccccacccgaggccgcttgtgcagctccggtccctgacat----agg +gttaccctcgggtaccccctcgtccgctggcgatat-----------------ctgggtgtt---------- +---------tccaccgccc----tctgaggggt--------------cggcgaccgttttgccacccgtaac +cccggttagtaagccaaccga---------------------------------------tccgcc------ +------------------------------------------------------------------------ +-tagtctaat-------------------------------------------------------------- +-------------tataccc----aggcctcccgtccgtgagccgcccacgccaccgccggccctaacctcg +c---------------------------------------------tcagtaaaccagctaacccgcctagt +cttactacccctagg-------------------------------------ccccccgtccgcgagccgcc +tacacctcc--------------------------------------aacgacccgtacccgccggc----- +-------------------tcctttatacatatcctgatggggccaaggtgtatgcaggctctttgtttgag +tcagattgtgactggttggttaatgcatctaatcctggccaccgccctggtggtggcctttgtcatgcattt +taccagcgcttccctgagtcgt------ttcatccgactgattttgtcatgcgtgaagg---tctcgccgct +tatactttgagcccgcgtccgatcattcatgctgtggcccccgactacagggttgagcagaaccccaagagg +ttagaggcggcataccgtgagacctgttcccgccttggcacagctgcctacccgctactggggtcggggatt +tatcaggtccctgtgggcttaagcttcgacgcctgggagcgtaaccaccgcccgggcgatgaactttacctt +actgagccagctgccgcc-------------------------------------------------tggtt +cgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccagccttaacaattactgaggacaccgc +cc------------gcacagctaaccttgcgcttgagattg------------actctgctactgaggtggg +tcgtgcctgc---gccggctgcactattaaccctgggattgtccactaccagttcactgctggggtccctgg +ctccgggaagtctaggtctatacagcagggggatgttgatgtcgttgtcgtgccaactcgagagcttcgtaa +cagctggcgacgccgcggttttgctgcttttacaccccacacagcagctcgtgtcactgccggccggcgtgt +ggtgatagatgaggcaccttcacttccaccgcacttgctcctgcttcatatgcagcgagcctcatcggtcca +ccttcttggtgaccccaaccagattcctgccatcgattttgagcacgccggtttggtcccagcgattcgccc +tgagctagcccctactagttggtggcacgtcacccaccgctgccccgctgatgtgtgtgagctcatacgcgg +ggcttacccaaagattcagacgaccagccgtgtgctgagatctttattttggaatgag------cctgcggt +gggtcagaggctggttttcacgcaggcagccaaggctgctaaccctggcgcaattaccgttcatgaggccca 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+-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgcctccgacgtcgtatcacaatccggggctggagctcgccctc +gacagccggctcg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccccccgctaccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtttcaccagcgcctgatacagccccagttcctgatgttgactctcgcggcgctatcttgcgccgcca +gtataatttgtccacttctcctctgacttcgtctgtcgcctctggaactaatcttgtcttgtatgccgcccc +gcttaatcctcttctgcctctccaagacggcactaacactcacatcatggcgaccgaggcgtctaattacgc +tcagtatcgggtcgtccgggccacaatacgctatcgccctttggtgccaaatgccgtcggtggctatgcaat +ttctatctctttctggccccagactacaactacacccacctctgttgatatgaactctattacttctacaga +tgttaggattttagtccagcctggaatagcctctgagctggttatcccgagtgagcgccttcattatcgcaa +tcagggctggcgctctgttgagacatcgggtgtggctgaggaggaggcgacttcaggtttggttatgctttg +tattcatggttcccctgttaattcctataccaacacgccctataccggggcattggggctccttgactttgc +actcgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgttacactagtacagc +ccggcatcgtttgcgccgtggtgccgatgggacggctgagcttacaaccactgcagccacacgttttatgaa +ggacctgcatttca---ccgggacaaat---ggtgttggcgaggtgggccgtggtatagccctaacgctatt +caatcttgctgatacacttctcggcgggctgccgacagaattratttcgtcggctggaggtcaactgtttta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctctgtcgagaatgcacagca +ggacaagggcattgctataccacatgacatagatttaggagattcccgtgtggttatacaagactatgataa +ccaacatgaacaagaccggcctactccatcgccggccccgtcccgtcccttttcagtccttcgagccaatga +tgtcctatggctctc-----------------------------tttgactgcggctgaatatgac------ +cagactacttatggttcgtcgaccaaccctatgtatgtctcaratactgtcacatttgt---taatgtggct +acgggtgcccaggctgtttcccgatcccttgattggtccaaggtcaccttggatggccggccactcactacc +at-----ccagcagtactccaagacattttacgtgc-tgccgcttcgtggcaagctttccttttgggaagct +ggtacgactaag--gctggctacccttataattataacactactgctagtgaccagattctgatcgagaatg +cagccggtcac------cgtgttgccat-atctacttacactactagtcttgg--------------tgccg +gccctgtgtctgtttc-tgcggtcggcgttcttgctccgcactctgctttagctgtgcttgaagatactatt +gact---------accctgcccgtg----cacatacttttgatgatttctgccctgagtgccgtaatc---t +cggcttgcagggctgtgctttccagtc--------tactatcgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt----tc-cc---ttt------gt +gccc-cct--------tc-taaa-ctttg----c--tc-tgtt---------------a-tt-t-------c +ttttttcg----ggg---------------ttccc-cgccccccg---------------------gaaaaa +a----------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>FJ457024.1/17217/1-7217 |Hepatitis E virus isolate HEVH from India, complete genome +--------------------------aggcagacca-catatg-------------t-----ggtcgatgc- +---catggaggcccatcagtttatcaaggctcctggtatcactactgctattgag---caggctgctctagc +agcggccaactctgccctggcgaatgctgtggtagttaggccttttctctctcaccagcagattgagatcct +cattaacctaatgcaacctcgccagcttgttttccgccccgaggttttctggaatcaccccatccagcgtgt +catccataatgagttggagctcta---ctgccgcgccc-gctccggccgctgccttgaaattggcgcccacc +cccgctcaataaatgataaccctaatgtggtccaccgctgcttcctccgccctgttgggcgcgatgtccagc +gctggtatactgcccccactcgcgggccggctgctaattgccggcgttccgcgttgcgcgggctccccgctg +ctgaccgcacctattgcttcgacgggttttctagctgtagcttccccgccgagacgggtattgccctctact +ccctccatgatatgtcaccatctgacgtcgccgaggccatgttccgccacggtatgacgcggctttatgccg +ccctccatctt-ccgcctgaggtcctgctgccccctggtacataccgcaccgcatcgtatttgctgattcat +gacggcaggcgcgttgtggtgacgtatgagggtgataccagtgctggttataaccacgatgtctccaacctg +cgctcctggattagaaccaccaaggttactggggaccatcccctcgttatcgagcgggtcagggccattggc +tgccacttcgttctcttgctcacggcagccccggagccatcacctatgccttatgtcccttacccccggtct +accgaggtctatgtccgatcgatcctcggcccgggt---------ggtaccccttccctattcccaacctca +t----------gctcgactaagtcca-catttcacgccgtccctacccatatttgggaccgtcttatgttgt +tcggggccaccctggacgaccaagccttttgctgctcccgtttaatgacttaccttcgcggcattagctaca +aggttactgtgggtacccttgtggctaacgaaggctggaacgcctctgaggacgccctcacagctgtcatca +ccgccgtctaccttaccatttgccaccagcggtacctccgcacccagggtatatccaaggggatccgtcgtc +tggaacgggagcatgcccagaagtttataacacgcctttacagctggctcttcgagaagtc---------cg +gccgtgattacatccctggccgtcagttggagttctacgcccagtgtaggcgctggctttcggccggctttc +atcttgatccacgtgtactggtttttgacgagtcggccccctgc---cattgtaggactgtgatccgcaa-- +----ggcgctctcgaagttttgctgctttatgaagtggcttggtcagga------gtgcacctgttttcttc +----------------aacctgcagaaggcgtcgtcggcgaccagggt--------catgataacgaagcct +atgaggggtccgatgttgaccctgctgagtccgccattagtgacatctctgggtcctatgtcgtccctggca +cagccctccaaccgctctaccaggccctcgatctccccgctgagattgtggctcgcgcgtgccggctgaccg +ccacagtaaaggtctcccaggtcgatgggcggatcgattgcgagacccttcttggtaacaaaaccttccgca +cgtcgtttttcgacggggcggtcttagagaccaatggccc------------------------agagcgcc +acaatctctcctttgatgccagtcagagcactatggccgctggccctttcagtctcacctatgccgcctctg +cagctgggctggaggtgcgctatgttgct-------gccgggcttgaccatcgggcgatttttgcc---ccc +ggtgtttcaccccggtcaaaccccggcgaggtcaccgccttctgctctgccctatataggttcaaccgtgag +gcccagcgccattcgctgaccggtaacttatggttccatcctgaggggcttattggcctctttgccccgttt +tcgctcgggcatgtctgggagtcggctaaaccgttttgcggggagagcacactttacacccgtacttggtcg +gaggttgatgccgtctatagtccagcccggcccgacttaggttttatgtctgagcctcctatacctagtagg +gccgccac----------------------------gcctac-----------cttggcggc---------- +---------cccttcaccc----ccccttgcac--------------cggacccttcccctccttcttctgc +cccgg------------------------------------------------------------------- +-------------------------------------------------------------cgc-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcgatgagccggct------tctgcc +gctatcgc-----------------cgg------------------------ggtcccggccataacccacc +aga----------------------------------------------cggcccggcaccgccgcc----- +-------------------tgttcttcacctacccggatggctctaaggtgttcgccggctcgctgttcgag +tcgacatgcacgtggctcgttaacgcgtctaatgttgaccactgccctggcggcgggctttgccatgcattt +taccaaaggtaccccgcctcct------ttgatgctgcctcttttgtgatgcgcgacgg---tgcggccgcg +tacacactgaccccccggccaataattcatcgtgtcgcccctgattataggttggaacataacccaaagagg +cttgaggctgcttatcgggagacttgctcccgcctcggcaccgctgcatacccgctcctcgggaccggcata +taccaggtgccgatcggtcccagctttgacgcctgggagcggaaccaccgccccggggatgagttgtacctt +cctgaacttgctgccaga-------------------------------------------------tggtt +tgaggccaataggccgacccg--------------------------------------------------- +------------------------------------------cccaactctcactataactgaggatgttgc +ac------------ggacagcgaatctggccatcgagcttg------------actcagccacagatgtcgg +ccgggcctgt---gctggctgccgggttacccccggcgttgttcagtaccagtttaccgctggtgtgcctgg +atccggcaagtcccgctctattattcaagccgatgtggacgttgtcgtggtcccgacgcgcgagttgcgcaa +tgcctggcgccgccgcggcttcgctgctttcactccgcacacagccgctagagtcacccaggggcgccgggt 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+cactctgatgttcgcgactctctcgcccgttttatccccgccattggccccgtgcaggttacaacttgtgaa +ttgtacgagctagttgaggccatggtcgagaagggccaagatggctccgccgtccttgagctcgacctttgc +aaccgtgacgtgtccaggatcaccttcttccagaaagattgtaataagttcaccacgggcgagaccattgcc +catggtaaggtgggccagggcatttcggcctggagcaagaccttttgcgccctctttggcccttggttccgt +gctattgagaaggctattctggccctgctccctcagggtgtgttttacggtgatgcctatgatgacaccgtc +ttctcggcggctgtggctgcagcaaaggcatccatg---gtgtttgagaatgacttttctgagtttgactcc +acccagaataatttttcttt------------------gggcctagagtgtgctattatggaggagtgcggg +atgccgcagtggctcatccgtttgtatcaccttataaggtctgcgtggatcctgcaggccccgaaggagtct +ctgcgagggttttggaagaaacactccggtgagcccggcactcttctatggaatactgtctggaatatggcc +gttattacccactgctatgacttccgcgatttgcaggtggctgccttcaaaggtgatgattcgatagtgctt +tgcagtgagtaccgtcagagcccaggggctgctgtcctgatcgccggctgtggcttaaagttgaaggtagat +ttccgcccgatgcgtttgtatgcaggtgttgtggtggcccccggccttggcgcgcttcctgatgttgtgcgc +ttcgccggccggcttaccgagaagaattggggccctggccctgagcgggcggacgagctccgcctcgctgtg +agtgattttcttcgcaagcttacgaatgtagcacagatgtgtgtggatgttgtttcccgtg-------ttta +tggggtttcccctgggctcgttcataacctgattggcatgctacaggctgttgctgatggcaaggctcattt +cactgagtcagtaaaaccagtgctcgacctgacaaattcgatcctgtgtcgggtggaatgaataacatgtc- +t----------------tctgctgcgcccatgggt---------tcgcgaccatgcgccctcggcctattct +gctgctgttcctcatgtttttgcctatgctgcccgcgc---------------------------------- +-caccgc------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggttc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----caatcccctatattcat---- +--------------ccaaccaaccctttcgccccgaatgtcaccgctgcggccggggctggacctcgtgttc +gccaacccgcccg---------------accactcggctccgcttggcgtgaccaggccca----------- +------gcgccccgccgctgcctcacgtcgtagacctaccaca---------gctggggccgcgccgttaac +cgcggtcgctccggcccatgacactccgccagtgcctgatgtcgactctcgcggcgccatcctgcgccgtca +gtataatctatcaacatctcctctcacctcttccgtggccactggcactaatctggttctttatgccgcccc +tcttagtccgcttttacccctccaggacggcaccaatactcatataatggccacggaagcttctaattatgc +ccagtaccgggttgcccgtgccacaatccgttaccgcccgctggtccccaaagctgtcggcggttatgccat +ctccatgtcattctggccgcagaccaccaccaccccgacgtccgtcgatatgaattcaattacttcgacgga +tgttcgtattttagtccagcccggcatagcctctgagcttgtgattccaagtgagcgcctacactatcgtaa +ccaaggttggcgctctgtcgagacctccggggtggccgaggaggaagccacctccggtcttgttatgctttg +catacacggctcacccgtaaattcctatactaatacaccctataccggtgcccttgggctgctggactttgc +ccttgagcttgagttccgcaaccttacccccggtaacaccaacacgcgggtctcccgttattccagcactgc +tcgccaccgccttcgtcgcggtgcagacgggactgccaagctcaccaccacggctgctacccgctttatgaa +ggatctttatttta---ctagtactaat---ggcgttggtgagatcggccgcgggatagctcttaccctttt +caacctcgctgacactttgcttggtggcctgccgacagaattgatttcgtcggctggtggccagctgtttta +ctcccgccccgttgtctcagccaatggcgagccgactgttaagctgtatacatctgtggagaacgctcagca +ggataagggtattgcaatcccgcatgatattgacctcggagaatcccgtgtggttattcaggattatgataa +tcaacatgaacaagatcggccgacgccttctccagccccgtcgcgccctttctctgtccttcgagctaatga +tgtgctttggctctc-----------------------------tctcaccgctgccgagtatgac------ +cagtccacttacggctcttcaactggcccagtttatgtttctgactctgtgaccttggt---taatgttgcg +accggcgcgcaggccgttgctcggtcgctcgattggaccaaggtcacacttgatggtcgccccctttccacc +at-----ccagcagtactcgaagactttctttgtcc-tgccgctccgcggtaagctctctttctgggaggca +ggtacaactaag--gccgggtacccctataattataataccactgctagtgaccaattgctcgttgagaatg +ccgccgggcac------cgggttgctat-ttctacttacaccaccagcctagg--------------tgccg +gccccgtttccatttc-tgcggttgctgttttagccccccactctgcgctagcattgcttgaggataccttg +gatt---------accctgcccgcg----cccatacttttgatgacttttgcccagagtgccgccccc---t +cggcctccagggctgcgctttccagtc--------cactgtcgctgagcttcagcgcct------------- +--------taagatgaaggtgggtaaaactcgggagttatagttta-ttt------gctt----------gt +gcccccct--------tc------tttctg------tt-----------------gcttatt-t-------c +tcttttct----gcg----------------tttcgcgctccctg---------------------aaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>EU360977.1/17258/1-7258 |Hepatitis E virus isolate swX07E1, complete genome +------------------------gaaagcagacca-cgcatg-------------t-----ggtcgatgc- +---catggaggcccatcaatttattaaggctcctggcataactactgccattgag---caggctgctctggc +tgcggctaactccgccttggcgaatgctgtggtggtccggccgtttttatcccgtgtacagactgaaatcct +tattaacctgatgcaacctcggcagcttgtttttcgacctgaggtcctttggaatcacccgatccagcgagt +catacacaatgagctagagcagta---ctgccgagctc-gcgctggccgctgccttgaggttggtgcccacc +cgagatccattaatgataatcctaatgttttgcaccggtgcttcctccgtccggtcgggagagatgtccagc +gttggtattcggctccaacccgtggtccagcggccaactgccgccgttctgcgctacgtggtttgccccctg +tcgatcgaacatactgcttcgacgggttctcccgctgtgcttttgctgctgagaccgggattgctttatact +cattgcatgacctttggccttcggatgttgcagaggctatggcccgccatgggatgacgcgcttgtacgctg +tccttcaccta-ccccctgaggttttgttaccacctggcacctaccacacaacctcttacctcctgatccac +gacggcgaccgcgccgtcgtgacttatgagggggatactagtgcgggctataaccacgatgtgtccatactt +cgtgcttggattcgcaccactaaaatagttggtgatcacccgctggtcatagagagggtccgtgccatcggc +tgccattttgttctgcttcttaccgcagcccccgagccgtcccctatgccttacgttccgtaccctcgctca +actgaggtgtatgtcaggtccatatttggccccggc---------gggtcgccctctctcttcccatcagcc +t----------gctctaccaagtcca-cttttcatgccgtcccggttcatatatgggaccggctcatgcttt +tcggtgccaccttagatgatcaagccttctgctgctcgcggctcatgacctatctccgcgggatcagctaca +aggtgaccgtcggcgcacttgttgctaatgagggctggaatgcctcggaggatgcgcttaccgctgtgatca +ctgcagcgtacctgactatttgtcatcaacgctacctccgaactcaagctatctctaaaggtatgcgccggc +tagaggttgagcacgcccaaaaatttatcacaagattatatagctggttgtttgagaagtc---------ag +gccgtgattacatcccaggccgccagcttcagttctatgcacagtgccgccgttggctctcggctggcttcc +acttggaccctagagtccttgtttttgatgaggcagtcccttgc---cgctgccggagcttcttaaagaa-- +----ggttgccgggaaattttgttgttttatgaaatggctgggtcaaga------gtgcacctgctttttgg +----------------agccagcggagggcttggttggcgactgtggc--------catgataatgaggcct +atgaggggtccgaggtggaccccgctgagcctgcccaccttgacatttctggtacttacgcggtccacggca +gccagcttgaggccctttatagggcgctgaacatcccgcatgacattgcagcccgcgcgtcacgtttgacgg +ctactgtggagcttgttgccagcccaggtcgactcgagtgccgcacggtgcttgggaataagacctttcgta +catcgatagttgatggcgctcaccttgaagctaatggtcc------------------------tgagcagt +acgtcctgacatttgatgattcccgtcaggcaattggggccgggcctcacagccttacgtatgaacttgtcc +ccgctggcctgcgagttaaaataacctct-------aacggcttggactgtaccgcagtattcccg---cct +ggcggggcgccaagcgccacgccaggtgaagtggcggctttctgcagcgccctatacaggtataataggttt +acccagcgccattcactgaccggtgggctgtggttgcaccctgaggggctccttggtttgttccctcctttc +tcccctgggcatctttgggagtctgcgaaccccttttgtggtgagagtacactctatacccgaacttggtct +acatctggtttctctagtgacttttccccccctgaggcggctactgccgccccagcccttgacat----ggg +gccaccctcgggtgccccctcaactaccggtgatgt-----------------ctgggtgtt---------- +---------tccgccgccc----tccgagcggt--------------cggcggctgttctgtcacccggaac +cccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcagtaagcctgctagcttgcctagt +cttattacacctaga-------------------------------------ccccccgctcgtaagccacc +cacaccacc--------------------------------------accggctcgtaaccgccggc----- +-------------------tacttcatacctatcccgacggggccaaggtgtatgcaggctctttgtttgag +tcagactgtgactggctggttaacgcatctaaccctggccaccgtcctggcggtggcctctgtcatgcgttt +taccagcgtttcccggagtcgt------tccatccaaccgacttcgtcatgcgtgaagg---tctcgccgca +tatactctgtgtccacgtccgattatccatgctgtggcccctgactatagggttgagcagaaccccaagagg +ctagaggcggcatatcgcgagacctgttcccgcctcggcacagctgcctacccgctgctggggtcggggatc +tatcaagtccctgtaagtttaagtttcgatgcctgggagcgtaaccaccgcccgggcgatgaactttatctt +actgagccggccgccgcc-------------------------------------------------tggtt +tgaggctaataagccaaccca--------------------------------------------------- +------------------------------------------gccggccctaacaattactgaggatactgc +cc------------gtacggctaacctcgcgcttgagattg------------actccgccactgaggttgg +ccgggcttgt---gccggttgtgctatcaaccccggagtcgtccactatcagtttactgccggggtccctgg +ctctgggaagtctaggtccatacaacagggggatgttgatgttgtggttgtgccgacccgcgaactccgcaa +tagctggcggcgtcgcggctttgccgcttttacaccacatacggcggcacgtgttactgctggccggcgtgt +tgtgatagatgaggcaccctcgcttccaccgcatttgctgttgcttcacatgcagcgagcctcaacggtcca +ccttcttggtgaccccaatcagatccctgctattgactttgagcatgccggtctggtcccggcgatccgccc +tgagcttgccccgaccagttggtggcatgtcacccaccgttgccccgccgatgtgtgtgagctcatacgtgg +agcttatccaaagatccaaacgactagccgtgtgctacggtctttgttttggaacgag------cctgcggt +gggccagaagttggttttcacgcaggctgctaaagcggctaaccctggcgcaattaccgtccatgaggccca +gggcgctacgtttactgagaccaccattatagccacggccgatgctagaggtctcatccaatcctcccgtgc +acatgccatcgttgcgctcactcgtcacacagaaaaatgtgttattttggacgcccctggcctactgcgtga +ggtcggtatttctgacataattgttaataacttc------------------------------tttctggc +cggcg--gtgaagtgggccaccatcgcccttccaccataccccgtggcaacccggaccagaacctagatac- +-----cttacgagcatttcctccgtcctgtcaaatcagtgcctaccaccagctggctgaggagctgggccat +cgaccggccccggtggccgccgttctgcccccctgccctgaactcgagcagggcctgctctacatgccacag +gagcttacagtctcggacagtgttttggtctttgaactcacggacatagtccactgccgtatggctgcccct +agtcaacgtaaggcggtcctctcaacactcgtcggcaggtacggtcgtcgaacgaagctgtatgaagcagcc +cattctgatgtccgtgagtctttggggaggttcatccctactatcggaccagtccaagccaccacatgcgag +ctatatgaactggttgaagctatggtggagaagggccaggacggctccgctgtgttagagcttgatctctgt +agccgcgatgtttcgcggatcacatttttccaaaaggattgtaacaagttcacaacaggtgagaccattgcc +catggtaaggtgggccagggcatttcggcttggagtaagaccttctgtgctttatttggtccgtggttccgt +gccattgagaaggagatcttagctctgctcccgcctaatatattttatggcgacgcctatgaggagtcagtg +ttctctgcagccatctctggagcgggctccagtatg---gtctttgaaaatgatttttctgagtttgatagt +acccagaataacttctccct------------------tggccttgagtgtgtcattatggaagagtgtggc +atgccccagtggcttattcgattatatcatttggttagatcagcctggaccctgcaagccccgaaagagtct +ctgaaaggtttttggaagaagcactctggcgaacccggcaccctcctttggaacactatctggaacatggca +attatagcacattgctacgagtttcgtgatctgagagtggcagcgttcaagggggacgattcagtggttctt +tgcagtgattaccgccagagccgcaatgcggctaccttgatagccggttgtgggttgaaactgaaggttgat +taccgtcctataggcttgtatgccggcgttgtagtggccccgggcctcggtgcactccctgatgtcgtccgg +ttcgccggtcgactgtccgagaagaactggggcccgggccccgaacgcgccgamcagttgcgtctggcagtc +tgtgatttcctccgagggctgacgaatgttgcgcaggtttgtgttgatgttgtatcccgtg-------tcta +tggggttagccccgggttggtacataaccttattggtatgctacagactattgctgatggaaaggctcactt +tactgagactgttaagcctgtactggatcttaccaattctatcatacagaggttagaatgaataacatgtt- +t----------------tgtgcattgcccatggg------------gtcaccatgcgccatagggctgttct +gttgctgttcctcgtgtttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggttc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcgtatcacaatccggggctggagctcgccctc +gacaaccggcccg---------------ccccctcggctcctcttggcgcgaccagtccca----------- +------gcgcccccccgccgccccccgtcgtcgatctacccca---------actggggctgcgccgctaac +tgctgtttcacctgcgcctgactcagccccagttcctgatgttgactctcgcggtgctatcttgcgccgtca +gtataatttgtctacctctcctttgacttcatctgtcgcttctggtaccaaccttgttttgtatgccgcccc +acttaatcctctcctgccyctccaagatggcactaatactcatatcatggcgactgaggcgtccaactatgc +ccagtatcgagtcgttcgggccacaattcgttatcgccctttggtgccgaatgccgtcggcggctatgcaat +ttccatctctttctggccccagactacaactacccctacttctgttgatatgaattctattacttctaccga +tgttaggatyttagtccagcctggcatagcttctgagctggtcattccgagtgagcgcctccattaccgcaa +ccaaggttggcgctctgtcgagacctcgggtgtggccgaggaggaggcgacatcaggtttggttatgctctg +tattcatggttcccctgttaattcctacaccaacacgccctacaccggagcgttaggcctccttgattttgc +acttgagcttgaatttagaaatttgacccctgggaacactaacacccgtgtgtcccgttataccagcacggc +tcgccaccgtttgcgtcgtggtgccgacggcacggccgagctcacaaccactgcagccacacgttttatgaa +ggatctgcatttca---ctgggacgaat---ggtgttggtgaggtgggccgcggtatagccctgacgttatt +taatcttgctgacacacttcttggcggtttgccgacagaattgatttcgtcggctggaggtcaactatttta +ctcccgcccggttgtctcagccaatggcgagccgactgttaagttatacacctccgttgagaatgcacagca +ggataagggcattgccataccgcacgacatagatctgggtgattcccgtgtggttattcaagactatgacaa +ccagcatgaacaggatcggcccaccccgtcgccggctccgtcccgccctttctcggtcctccgggccaatga +tgtcttgtggctctc-----------------------------cctgactgcagctgaatatgac------ +cagaccacctatggctcatccaccaaccccatgtatgtttcagataccgtcacatttgt---aaatgtggcg +acaggtgctcaggctgtcgcccgttcccttgactggtccaaggttaccttagacggccggcctcttactact +at-----ccagcagtactctaaaacattttatgtgt-tgccgcttcgcggtaagctctccttttgggaggcc +ggtactactaag--gccggctacccttataattataacaccactgctagtgaccagattttgattgagaatg +cagccggccac------cgtgttgctat-atctacctatacaactagccttgg--------------tgctg +gccctgtgtctgtttc-tgcggttggcgtacttgccccacactctgctttagctatgcttgaggataccact +gatt---------accccgctcgtg----cccatacttttgatgatttctgccctgagtgccgtaatc---t +cggcttacagggttgtgctttccaatc--------tactattgctgagcttcagcgcct------------- +--------taaaatgaaggtaggtaagacccgggagtcttaattaa-tt-----t-tcc--gct------gt +gccc-cct--------tc-taag-tt-tt----gt-tt-tatt--------------------t-------c +ttttttct----gcg----------------tttcgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------aaaaaaa----------------------- +------------------------------------------------------------------------ +----------- +>EU366959.1/17281/1-7281 |Hepatitis E virus isolate swGX32, complete genome +------------------------gaaagcagacca-cgtatg-------------t-----ggtcgacgc- +---catggaggcccatcagttcataaaggctcctggcgttactactgctattgag---caggcagctctagc +agcggccaactctgccttggcgaatgctgtggtggttcggccctttttatcccgccaacagacagagatttt +aattaatttgatgcagccccggcagcttgtttttcggcctgaggttttgtggaaccaccctatacaacgtgt +gatccataatgagctcgagcaata---ttgtcgagctc-gcgccggccgctgccttgaagtgggcgcccacc +cacgatcgatcaacgacaatcctaatgttttgcatcgctgttttctcaaaccagttggccgtgatgttcagc +ggtggtatactgcccccacccgtggccctgcggcaaactgccgccggtctgctctccgcgggctgccacctg +ttgatcgtacatactgctttgacggcttttctggctgcacttttgccgccgagacgggtattgccctctatt +cactgcatgacctatggcctgctgatgttgccgaggcgatggcccgtcacggtatgacccggctctatgcag +cccttcatctc-ccccccgaagtgctattaccccctggcacatatcacactacctcatatctattaatccat +gatggggaccgtgcagtgattacatacgagggggattctagtgcaggatataatcatgatgtgtccatcttg +cgggcatggattcgtaccaccaaggtcaccggtgatcatccgttggtgattgagcgagtccgagcggtcggg +tgccactttgtgctcctccttacagccgctcctgaaccatcgccgatgccctatgttccatacccacgctca +accgaggtctatgttcggtctattttcggccctggt---------ggttcgccatccctttttccatctgcc +t----------gctctactaagtcaa-catttcacgccgtccctgtgcatatatgggataggcttatgctct +ttggtgcgactcttgatgaccaagccttttgctgctccaggctcatgacgtatctccgtggcattagttata +aggtcacggtaggtgctctcgttgccaacgagggttggaatgcttctgaggacgcgctgaccgccgtaatca +ctgcggcttatctcactatctgtcatcagaggtacctccgcacgcaggccatttcaaaagggatgaagaggt +tggagctcgaacacgcacagaagtttataacacgcctttacagttggttatttgaaaagtc---------tg +ggcgtgactatatccccggccgccaactacagttttacgctcagtgccgccggtggttatctgctggttttc +acctcgatcctcgtgtgctcgtttttgatgaagctgccccctgc---cgctgccggagttttctgcgtga-- +----agccgcccacaagttttgctgctttatgcggtggctaggtcagga------ctgcacctgctttcttc +----------------agcctattgaagggagggtcggtgaacaaggt--------tatgacaatgaagcgt +ttgaggggtcggacgttgaccctgctgaggaggctaccgtgagcatctctgggtcatatattgttaccggcc +gtcagctgcagcctctttatcaagcgcttggcataccatctgatcttgccgcacgtgccagtcggcttgctg +ccaccgttgaagtttcagacgctgagggccgtcttacctgtaagactatcttgggcaataaaaccttttcaa +cggtattcactgatggcgcccagctggaggccaacgggcc------------------------ggaacagt +atgttctatcatttgatctgactaaacaaactatggctgctggcccgcatagtcttagttataccttaacat +ctgaaggccttgaagtacatattatttcc-------gctgggcttgactgcaaggctgtcttcccg---cct +ggtgtcgcaaccccttctgcttccggggaggtgtccgctttttgctcagctctttataggtttaaccgctgt +gtccagcggcattcccttattggaggtttgtggtactatcctgagagcttagttggtttgttcccaccgttt +tcccccggccatagctgggaatccactaaccctttctgtggtgagagcaccctttatactcgcacttggtct +gtgtcgggcttttccagctgtttctctcctctcgagcctcgtgccccggagctgccacctctaggt---gac +attgacat----------gtctgtagttattgatac-cccgcca---------ttggtttcc-----cctgt +gcagactcagcctcaaact----cccggtcctg---ttg--------------------cgtccccaccgga +tttgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttgatggtggagctggccctggtttg +actagcgcctctgtg---------------gag-------------------cccccggcgtccgtgcagct +tgtaaccca--------------------------------------gc---ccgggccccgtcgacg---- +-----------------actgctccatacttaccccgatggctcaaaagtgtatgccggatctctttttgaa +tccgagtgtacatggctggttaatgcctctaacccgggccaccgccctggtggtggcctttgccatgcattt +taccaacggttcccagagtctt------ttgaccccgctgagtttatcatgtccgacgg---gtttgctgcc +tacaccctgacacctcgacccataattcatgctgttgcccctgactatcgcgctgaacataaccccaagcga +cttgaggccgcctaccgggagacgtgctctcgccgtgggacagcagcttaccccttgctcggcgctggtata +tacaaggtccctgttgggttgagctttgatgcttgggaacgtaaccatcggcctggagacgagctgtatttg +accgagccagccatagcc-------------------------------------------------tggtt +tgaggccaaccgacctaccct--------------------------------------------------- +------------------------------------------tcctgcccttactattactgaggacacggc +gc------------gcacggcaaatctagcgttggagctgg------------atgcggccactgaggtcgg +ccgggcgtgt---gctggctgtcgcgttgaacccggtgtagtccattaccagtttacagctggtgttcctgg +ttctggtaaatcccggtcaatccagcaaggggaagtagacgtcatagtagtgccaacccgtgagttgcgtaa +ctcatggcgccgccgcgggtttgcagcctacacaccccacactgcaactcgtgtgactcgtggccgtagagt +tgttatcgacgaagccccttcgcttccaccacacttgctcctgctgcatatgcagcgggcctcgtcagttca +ccttcttggtgatcctaaccaaattcccgccattgattttgagcatgccggtctcgttccggcaatccggcc +tgagttggttccaactaagtggcggcacctcacccataggtgccctgcagatgtttgtgagctgatccgtgg +tgcatatccaaagattcaaactgcaagccgtgtcctccgctctttgttttggggggag------ccccctgt +gggccagaagccggtattcacccaggccgccaaggctgctaaccctggtgcaattacagttcatgaagccca +gggcgctacattcactgagactacaattattgccacggcggatgctcgcgggctgattcagtcctccagggc +tcatgctattgttgccctgacccgccacacggagaagtgcgtggtagttgatgccccggggcttcttcgtga +ggtaggtatctctgatgcaattgttaacaatttc------------------------------ttcctctc +tggcg--gcgagatcggtcaacaccgtccgtcagtcgtaccccgtggcactattagcagcaatgttgacac- +-----gcttgatgcatctcccccttcctgtcagtttagcgcgtaccatcaactggccgaagagcttggccat +cggcccgcgccgattgctgctgtcttgcccccctgcccagagcttgagcaaggcttactttatatgcctcag +gagctaaccacatcggacagtgttctcaccttcgaactaacggacattgtgcactgccgtatggcggcaccc +agtcagcgtaaggcggtcctgtcgactcttgtcggcaggtacggccgtcgcacgaagctgtacgaggctgcc +cacacagatgtccgtgggtccctgaatcattttattcctgagcttggccctattagtgtcaccacctgcgag +ctctatgagcttgtagaggctatggtagagaaaggccaagacggctctgcagtcctggagcttgacctatgt +aatcgtgatgtgtcccggataaccttcttccagaaagattgtaataagtttacaacaggtgagacgatagcg 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+t----------------tttgctcattgcatggcg---------atgccaccatgcgctctcgggctcttct +gtttttgctcctcttgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gtcgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgcatctgacattccagcggccgccggggctggagctcgccctc +gacaaccagcccg---------------tccactcggctccgcttggcgcgaccagtccca----------- +------gcgccccgccgctcccgcccgtcgtcgatctacccca---------gctggggcttcgccgctgac +ggctgtggctccggcccctgatattgccccggtccctgatgttgattcgcgcggtgctatactacgccgtca +gtataatttgtctacgtctccactcacatccactattgctaccgggactaatcttgtgctatatgctgcccc +gcttagccctctacttccacttcaggacggcaccaacactcatattatggctactgaagcttcaaattatgc +ccaatatcgtgttgtccgcgccaccatccggtatcgccccttggtgccgaatgctgtcggcgggtatgctat +atctatttctttttggccccaaacaactaccaccccgacgtccgtggatatgaattccatcacttccaccga +tgtccgtattcttgttcagcccggtatagcttctgagttggttatccccagtgagcgcctgcactatcgtaa +tcagggttggcgctcagttgagacctctggcgttgctgaggaggaggctacttccggtcttgtcatgctctg +tattcatgggtcacctgtgaactcttacaccaacacaccctatactggtgctcttggcctgctcgattttgc +acttgagcttgagtttcgtaatctgacacctggtaatacaaatacgcgcgtttctcgttattcgagcagtgc +gcgccataaattgcgtcgaggggccgacggtactgctgagctaactactactgctgctacacggttcatgaa +ggatcttcatttta---cagggactaat---ggcgttggtgaggttggccgtgggatagcgcttaccttgtt +taaccttgctgacacacttctcggcgggcttccgacagaattgatttcgtcggccggtggccaactgttcta +ctcccgccccgtcgtttcagccaatggcgagccgacagtgaaactttacacctcagtcgagaatgctcagca +ggacaaagggattgctatcccacatgatatcgatcttggtgagtcccgagttgttattcaagactatgacaa +ccaacatgagcaagaccgccctactccctctcctgcaccctctcgtcctttttctgtgctccgtgctaatga +tgtgctttggctttc-----------------------------acttacggccgctgagtatgac------ +cagactacctacggctcttctactaaccctatgtatgtttctgatactgtgacgttcgt---caatgtagct +accggcgcccagggggttccgcgctccttagactggtctaaggtcacccttgatgggcgcccactaactact +at-----ccagcagtattccaagactttctatgtat-tgcctcttcgcggcaagctttctttttgggaggcg +ggtactactaaa--gctggttatccttacaactacaatactactgctagtgaccagatcctgattgagaatg +ctgctgaccac------cgggtttgtat-ttctacttatactactaatttagg--------------ttctg +ggcctgtttctatttc-tgccgtcggtgtcctcgcacctcattctgcattggctgttctagaggacactgtc +gatt---------atcccgctcgtg----ctcatacttttgacgacttctgccctgagtgccgtgcac---t +tggtcttcagggttgtgcttttcagtc--------aactgttgctgagttacagcgtct------------- +--------taaaatgaaggtgggtaaagcccgggagtattgactta-tt----tt-gctt----------gt +gcct-ccc--------tt------ctgcc--tttt----ccttt--------------tatt-t-------t +ccttttct----gcg----------------tttcgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------aaaaaaaaaaaaaaa--------------- +-aaaa------------------------------------------------------------------- +----------- +>EF570133.1/17293/1-7293 |Hepatitis E virus isolate SHSWzs1, complete genome +----------------------------gcagacca-cgtatg-------------t-----ggtcgacgc- +---catggaggcccatcagttcataaaggctcctggcgtcactactgctattgac---caggctgctctagc +agcggccaactccgccttggcgaatgctgtggtggttcggcctttcctgtcccggctacagacagagatact +tattaacctgatgcagctccggcagcttgttttccggcctgaggttctgtggaaccacccaatccagcgcgt +gatccacaacgagcttgagcagta---ctgccgagctc-gggctggccgctgccttgaggtgggagctcatc +cgcgttccattaatgacaaccccaacgttctgcaccgttgtttcttgaaacctcgtggccgcgatgttcagc +ggtggtacaccgcctccactcgtggccctgcagcgaactgtcgccgctcggccctccgtggccttccacctg +ttgaccggacatactgttttgatggtttttctggctgcacgtttgctgctgagactgggattgccctttatt +cactgcacgatttatggcctgctgatgttgcagaggcaatggctcgccacggtatgacccggttgtacgcgg +ctcttcatctc-cccccggaggtgctactccctcccggcacctatcataccacttcatatcttttaatccat +gatggcgaccgtgctgtgattacatatgagggcgattctagtgcaggatacaatcacgatgtgtctatcttg +cgcgcctggatccgcaccaccaaagttactggcgaccaccccttggtcattgagcgggtccgggcagtaggg +tgtcattttgtgcttttgctcacagctgcgcctgagccatcgccgatgccttatgtcccataccctcgctcc +accgaggtttacgtccggtctatctttgggccaggc---------ggctcgccttccctcttcccatctgct +t----------gctcgactaagtcca-catttcatgccgtccctgtgcatatttgggacaggcttatgcttt +ttggtgcgacccttgatgaccaggccttttgctgctcgaggcttatgacgtaccttcgcggtattagttata +aggttacagtcggtgccctcgttgctaacgaaggctggaatgcctccgaggatgcgctgactgctgtgatta +ctgcggcttatcttactatttgtcatcaaagatatctccgcacgcaggccatctcaaaaggaatgaagaggc +tggagcttgaacacgcgcagaagtttataacgcgcctttatagctggctgttcgagaagtc---------cg +gccgtgattacatccccggccgtcagttgcagttttatgcccagtgtcgccggtggttgtctgccggctttc +atcttgacccacgtgtacttgtttttgatgaggcagccccctgc---cgttgtcgtaattttctccggaa-- +----agctgctcacaagttttgttgcttcatgcggtggctaggacagga------ctgtacctgtttcctcc +----------------agcctatcgagggacgggtcggtgaacagggt--------tatgacaatgaagcat +ttgaagggtcggatgtcgaccctgctgaggaggcaaccgtgagcatctctgggtcatatattgtaactggta +gccagctacagcctctgtaccaggcacttggtataccctccgatcttgctgctcgtgctggccggcttactg +ccactgttgaggtctctgatgcagacggacgcctcacttgcaaaaccatcatgggcaataaaaccttctcga +cagtcttcactgatggcgcccagctggaggccaacgggcc------------------------ggagcagt +atgtgctgtcattcgacccgattaaacaaactatggccgccggcccgcacaatcttagttataccttgacat +ctgcaggccttgaaatacatgtcgtctct-------gccgggcttgactgtaaggccgtctttcca---tcc +ggggttgcgaccccgtctgcccctggggaagtgtccgctttttgtgcagcattgtatagatttaatcgctgt +gtccagcggcactccctcattgggggtgtgtggtaccatcctgaggggctggtcggcctgttcccgccgttc +tcccccggtcatagctgggagtctgctaaccccttttgcggggagagtactctttatacccgtacctgttcg +gtatcgggcttttccagctgcttttccccacttgagccggggggcccggacccaccccctcttgtt---gag +actgacac----------atctatagttgctgatac-tttgccc---------ccagttgtc-----tcagt +ac---------------cc----cctgagcaaa---tag--------------------cacctctaccaga +cccag------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tagataaggcagccggcctgactcca +tctagcacccccgtt---------------gtg-------------------tcaccagcaccggtgcagtc +tgtagcaca--------------------------------------atcacctgggccacgtcggcg---- +-----------------gctacttcatacctatcctgatggctcgaaggtgtatgccggctccctttttgag +tctgattgcacttggctggttaacgcatctaaccctggccaccgccctggcggtggtctctgtcatgcattc +taccagcggtttccagagtcat------ttgaccccgctgagtttgttatgtcagacgg---gttcgcagcc +tacaccctgtctccccggcctatcattcatgctgttgcccccgactatcgggttgaacataatcctaagagg +cttgaggccgcctatcgggagacttgctcccgcctcggcacagcagcttatcctttacttggcgctggtata +tataaggtgcctgttgggttgagcttcgatgcctgggaacgtaaccatcggcctggggatgagctgtatctg +actgaaccagccgtggcc-------------------------------------------------tggtt +tgaggcgaaccggcccaccct--------------------------------------------------- +------------------------------------------tccagcccttactattactgaggataccgc +gc------------gtacggcgaacctggcattggagttag------------actccgccactgaagtcgg +ccgggcgtgt---gccggttgccgcgttgagcccggtgtcgtccattaccagttcacagcaggtgtccctgg +ctcgggtaaatcccggtcagttcagcagggggaggttgatgtggtagtggtaccaactcgtgagttgcgtaa +ctcgtggcggcgccgcgggttcgcagcctatacaccccacactgcagctcgtgtcacccgtggccgtagggt +tgttattgacgaggccccgtcgctccccccacacttgcttttgttgcatatgcagcgggcctcttcagttca +tctcttgggtgaccccaatcaaatccctgccattgactttgagcatgccggtctcgttccagctattcggcc +ggagctggttccaacaaagtggtggcacgtcacccatagatgcccagccgatgtttgtgagttaatccgtgg +tgcgtacccaaaaatccagactgcgagtcgcgtacttcgctctctgttctggggagaa------ccccctgt +gggtcagaagttagtgttcacccaggcggcgaaggccgccaaccctggtgcgattacagtacatgaggccca +gggtgctacattcaccgagactacaattattgccacggcagacgcccgtgggctgattcagtcctctagggc +tcatgcgattgtggctctgacccgccacacagagaagtgtgtggtcgttgatgccccaggtctcctccgcga +agttggtatctctgacgctattgttaacaatttc------------------------------ttcctttc +tggcg--gtcagattggtcagcaccgcccgtcggtcataccacgcggcactattgactgtaatgttgacac- +-----acttgacgcattcccgccctcctgtcagtttagtgcttatcatcagctcgccgaggaacttggccat +cgaccggccccaattgctgctgtcttacctccctgcccggagcttgaacagggcttgctttacatgccgcag 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+tttaggcctattgggctgtatgctggtgttgttgtggccccaggtttgggaaccctacctgatgttgttagg +tttgctgggcggctctcagagaaaaactgggggcccggtttggagagggcagagcagctacggctggctgtt +tgtgatttcctgcgaaagttgacgaatgtggctcaggtttgtgtggatgttgtttcgcaag-------tata +cggtgttagccctggcttggtacataacttgattgggatgcttcagactattgctgatggtaaggcgcattt +taccgaaacagttaaacctgtcctcgatctgactaactccatcatatatcgggtggaatgaataacatgtt- +t----------------tttgctctgtgcatggag---------atgccaccatgcgctctcgggctcttct +gtttttgctcttcgtgttcctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagtcgtctggcc------------gtcgccgcgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgcatccgacattccaaccgcagccggggctggagctcgccctc +ggcagccagcccg---------------tccactcggttccgcttggcgtgaccaatccca----------- +------gcgccccgccgctcccgcccgtcgtcgacctgcccca---------gctggggcttcgccgttaac +agctgtagccccagcccccgacactgccccagttcccgacgtggactcccgtggtgcaatactgcgccgcca +gtacaatttgtccacgtcaccactcacgtctgctattgctactggcactaatcttgtcttgtatgctgcccc +gctgagccctctgcttcctcttcaggatgggactaacactcacattatggctaccgaggcctctaattatgc +tcagtatcgtgtggtccgtgccactattcggtaccggcctctggtgccgaatgcggttggcggctacgccat +atccatctcattttggcctcagacgacaaccaccccgacctctgtcgatatgaactctatcacttctactga +tgtccgtatcctcgttcagcctggtatagcctctgaacttgtgatacctagagagcgcctgcattatcgtaa +ccagggttggcgctcggttgagacctccggtgtcgcggaggaggaggctacctctggtcttgttatgctctg +cattcatgggtcccctgtgaattcctatactaatacaccctacgctggtgctctcggtttgctcgattttgc +gcttgagcttgagtttcgtaatttgacacctggcaatacgaacacgcgcgtttctcgttattctagtggcgc +gcgccacaagttacgccgagggcctgacggtactgccgagttgaccacgactgctgctacacgtttcatgaa +agacctacatttta---cagggactaat---ggtgttggtgaggttggccgtggtattgcgctaactctgtt +taatcttgctgatacgcttctcggcgggctcccgacagaattgatttcgtcggccggaggccagttgtttta +ctcacgccccgtcgtctcagccaatggcgagccgacagtgaagctctacacctcagtcgagaatgctcagca +ggacaagggtatagccattccacatgatatcgatcttggtgagtcccgagttgtcatccaggattatgataa +tcaacacgagcaagaccgtcccaccccctctcctgccccctcacgtcccttttcagtcctccgtgctaatga +tgtgctctggctttc-----------------------------cctgacggctgccgaatatgat------ +caaactacttatggttcttccactaatcctatgtatgtttctgacactgtgacatttgt---taatgtggcg +accggtgcccagggggtttcccgttccctagactggtccaaagttaccctcgatggtcggccgctcactact +at-----ccagcagtattctaagaccttctttgttc-tgccccttcgcggtaagctctccttctgggaggct +ggcactaccaaa--gctggctacccttataattataatactaccgccagtgatcagatcctaattgagaacg +cagctggtcac------cgtgtctgtat-ctcgacttatactactaatcttgg--------------ctctg +gtcctgtctctatctc-tgccgttggtgtcctcgcacctcattctgtgctggccgctctggaggacaccgtt +gact---------atcctgctcgag----ctcatacttttgatgatttttgccctgagtgccgtgcgc---t +cggtctccagggctgcgcatttcagtc--------gactgttgctgagctacagcgtct------------- +--------taaaatgaaggtgggtaaaacccgggagtattgattta-tt----ct-tctt----------gt +acctcccc--------tt------cggtt--ctgt-tt-ctttt--------------tatt-t-------c +tcctttct----gcg----------------ttccgcgctcactactatccagcaggatccatgttgaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------aaaaaa------------------------ +------------------------------------------------------------------------ +----------- +>DD496417.1/17194/1-7194 |Hepatitis E virus empty capsid, gene encoding the same, method for preparing the recombinant vector comprising the gene and usage of the vector +--------------------------aggcagacca-catatg-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcatcactactgctattgag---caggctgctctagc +ggcggccaactctgccctggcgaatgctgtggtagttaggccttttctctctcaccagcagattgagatcct +tattaacctaatgcaacctcgccagcttgttttccgccccgaggttttctggaatcatcccatccagcgtgt +catccataacgagctggagcttta---ctgccgcgccc-gctccggccgttgtcttgaaattggcgcccatc +cccgctcaataaatgataatcctaatgtggtccaccgctgcttcctccgccctgtcgggcgtgatgttcagc +gctggtatactgctcccactcgcgggccggctgctaattgccggcgttccgcgctgcgcgggcttcccgctg +ttgaccgcacttactgcctcgacgggttttctggctgtaactttcccgccgaaactggcatcgccctctact +cccttcatgatatgtcaccatctgatgtcgccgaggccatgttccgccatggtatgacgcggctctatgctg +ccctccatctt-ccgcctgaggtcttgctgcctcctggcacatatcgcaccgcatcgtatttgctgattcat +gacggtaggcgcgttgtggtgacgtatgagggtgatactagtgctggttataaccacgacgtctccaacttg +cgctcctggattagaaccaccaaggttaccggagaccatcccctcgttatcgagcgggttagggccattggc +tgccactttgttctcttgctcacggcagccccggagccatcacctatgccttatgtcccttacccccggtct +accgaggtctatgtccgatcgatcttcggcccgggt---------ggcaccccttccttattcccaacctca +t----------gctccactaagtcga-ccttccatgctgtccctgcccatatttgggaccgtcttatgctgt +tcggggccaccttggatgaccaagccttttgctgctcccgcttaatgacctaccttcgcggcattagctaca +aggttactgttggtacccttgtggctaatgaaggctggaatgcctctgaggacgccctcacagctgtcatca +ctgccgcttaccttaccatttgccaccagcggtatctccgcacccaggctatatccaaggggatgcgtcgtc +tggaacgggagcatgcccagaagtttataacacccctctacagctggctcttcgagaagtc---------cg +gccgtgattacatccctggccgccagttggagttctacgcccagtgcaggcgctggctctccgccggctttc +atcttgatccacgggtgttggtttttgacgagtcggccccctgc---cgttgtaggaccgcgatccgtaa-- +----ggcgctctcaaagttttgctgcttcatgaagtggcttggtcagga------gtgcacctgtttcctcc +----------------agcctgcagaaggcgtcgtcggcgaccagggt--------catgataatgaagcct +atgaggggtccgatgttgaccctgctgagtctgccattagtgacatatctgggtcctatgtcgtccctggca +ctgccctccagccgctctaccaggccctcgatctccccgctgagattgtggctcgcgcgggtcggctgaccg +ccacagtaaaggtctcccaggtcgatgggcggatcgactgcgagacccttcttggtaataaaacctttcgca +cgtcgttcgttgacggggcggtcttagaggccaatggccc------------------------agagcgct +acaatctctccttcgatgccagtcagagcactatggccgctggccctttcagtcccacctatgccgcctctg +cagctgggctggaggtacgctatgttgct-------gccgggcttgaccatcgggcggtttttgcc---ccc +ggtgtttcaccccggtcagcccccggcgaggttaccgccttctgctctgccctatacaggttcaaccgtgag +gcccagcgccattcgctgaccggtaacttatggttccatcctgagggactcattggcctcttcgccccgttt +tcgcccgggcatgtttgggagtcggctaatccattctgtggcgagagcacactttacacccgtacttggtcg +gaggttgatgccgtctctagtccagcccggcctgacttaggtcttatgtctgagccttctatacctagtagg +gccgccac----------------------------gcctac-----------cctggcggc---------- +---------ccctctaccc----ccccttgcac--------------cggaccctcccccccctccctctgc +cccgg------------------------------------------------------------------- +-------------------------------------------------------------cgc-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttgatgagccggct------tctggc +gctaccgc-----------------cgg------------------------ggccccggccataacccacc +aga----------------------------------------------cggcccggcaccgccgcc----- +-------------------tgctcttcacctacccggatggctctaaggtattcgccggctcgctgttcgag +tccgcatgcacgtggctcgttaacgcgtctaatgttgaccaccgccctggtggcgggctctgccatgcattt +taccaaaggtaccccgcctcct------ttgatgctgcctcttttgtgatgcgcgacgg---cgcggccgcg +tacacactaaccccccggccaataattcacgctgtcgcccctgattataggttggaacataacccaaagagg +cttgaggctgcttatcgggaaacttgctcccgcctcggcaccgctgcatacccgctcctcgggaccggcata +taccaggtgccgatcggccccagttttgacgcctgggagcggaaccaccgccccggggatgagttgtacctt +cctgagcttgctgccaga-------------------------------------------------tggtt +tgaggccaataggccgacccg--------------------------------------------------- +------------------------------------------cccgactctcactataactgaggatgttgc +ac------------ggacagcgaatctggccatcgagcttg------------actctgccacagatgtcgg +ccgggcctgc---gccggctgtcgggtcacccccggcgttgttcagtaccagtttactgcaggtgtgcctgg +atccggcaagtcccgctctatcacccaagccgatgtggacgttgtcgtggtcccgacgcgtgagttgcgtaa +tgcctggcgccgtcgcggctttgctgcttttaccccgcatactgccgccagagtcacccaggggcgccgggt +tgtcattgatgaggctccatccctcccccctcacctgctgctgctccacatgcagcgggccgccaccgtcca +tcttcttggcgacccaaaccagatcccagccatcgactttgagcacgctgggctcgtacccgccatcaggcc +cgacctagcccccacctcctggtggcatgttacccatcgctgcccagcggatgtatgtgagctcatccgtgg +tgcataccccatgatccagaccactagccgggttctccgttcgctgttctggggtgag------cctgccgt +cgggcagaaactagtgttcacccaggcggccaaggccgccaaccccggctcagtgacggtccacgaggcgca +gggcgctacctacacggagaccactatcattgccacagcagatgcccggggccttattcagtcgtctcgggc +tcatgccattgttgctctgacgcgccacactgagaagtcggtcatcattgacgcatcaggcctgcttcgcga +ggtgggcatctccgatgcaatcgttaataacttt------------------------------ttcctcgc +tggtg--gcgaaattggtcaccagcgcccatcagttattccccgtggcaaccctgacgccaatgttgacac- +-----cctggctgccttcccgccgtcttgccagattagtgccttccatcagttggctgaggagcttggccac +agacctgcccttgttgcagctgttctaccaccctgccctgagctcgtacagggccttctctacctgccccag +gagctcaccgcctgtgatagtgtcgtaacatttgaattaacagacgttgtgcactgccgcatggccgccccg +aaccagcgcaaggccgtgctgtccacacttgtgggccgctacggccgtcgcacaaagctctataatgcttcc +cactctgatgtccgcgactctctcgcccgttttatcccggccattggccccgtacaggttacaacttgcgaa +ctgtacgagctagtggaggccatggtcgagaagggccaggatggctccgccgtccttgagctcgatctttgc +aaccgtgacgtgtccaggatcaccttcttccagaaagattgtaacaagttcaccacaggtgagaccatcgcc +catggtaaagtgggccagggcatctcggcctggagcaagaccttctgcgccctctttggcccttggtttcgc +gctattgagaaggctattctggccctgctccctcagggtgtgttttacggtgatgcctttgatgacaccgtc +ttctcggcggctgtggccgcagcaaaggcatccatg---gtgtttgagaatgacttttctgagtttgactcc +acccagaataacttttctct------------------gggcctagagtgtgctattatggaggagtgtggg +atgccgcagtggctcatccgcttgtatcaccttataaggtcggcgtggatcttgcaggccccgaaggagtct +ctgcgagggttttggaagaaacactccggtgagcccggcactcttctatggaatactatctggaatatggcc +gttattacccactgttatgacttccgcgatttgcaggtggctgcctttaaaggtgatgattcgatagtgctt +tgcagtgagtatcgtcagagtccaggagctgctgtcctgatcgccggctgtggcttgaagttgaaggtggat +ttccgcccgatcggtttgtatgcaggtgttgtggtggcccccggccttggcgcgctccctgatgttgtgcgc +ttcgccggccggcttaccgagaagaattggggccctggccctgagcgggcggacgagctccgcctcgctgtt +agtgatttcctccgcaagctcacgaatgtagctcagatgtgtgtggatgttgtttcccgtg-------ttta +tggggtttcccctgggcttgttcataacctgattggtatgctacaggctgttgctgatggcaaggcacattt +cactgagtcagtaaaaccggtgctcgacttgacaaattcaatcttgtgtcgggtggaatgaataacatgtc- +t----------------tttgctgcgcccatgggt---------tcgcgaccatgcgccctcggcctatttt +gttgctgctcctcatgtttttgcctatgttgcccgcgc---------------------------------- +-caccgc------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggttc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----caatcccctatattcat---- +--------------ccaaccaaccccttcgcccccgatgtcaccgctgcggccggggctggacctcgtgttc +gccaaccagcccg---------------accactcggctccgcttggcgtgaccaggccca----------- +------gcgccccgccgttgcctcacgtcgtagacctaccaca---------gctggggccgcgccgctaac +cgcggtcgctccagcccatgacaccccgccagtgcctgatgtcgactctcgcggcgccatcttgcgccggca +gtataatctatcaacatctcccctcacctcttccgtggccaccggcactaacctggttctttatgccgcccc +tcttagtccgctcttacctcttcaggacggcaccaatacccatataatggccacggaagcttctaattatgc +ccagtaccgggttgcccgtgccacaatccgttaccgcccgctggtccccaatgctgtcggcggttatgccat +ctccatctcattctggccacagaccaccaccaccccgacgtccgttgatatgaattcaataacctcgacgga +tgttcgtattttagtccagcccggcatagcctctgagcttgtgatcccaagtgagcgcctacactatcgtaa +ccaaggctggcgctccgtcgagacctctggggtggctgaggaggaggctacctctggtcttgttatgctttg +catacatggctcacccgtaaattcctatactaacacaccctataccggtgccctcgggctgctggactttgc +ccttgagcttgagtttcgcaaccttacccccggtaacaccaatacgcgggtctcccgttattccagcactgc +tcgccaccgccttcgtcgcggtgcggacgggactgccgagctcaccaccacggccgctacccgctttatgaa +ggacctctatttta---ctagtactaat---ggtgtcggtgagatcggccgcgggatagccctcaccctgtt +taaccttgctgacactctgcttggcggcctgccgacagaattgatttcgtcggctggtggccagctgttcta +ctcccgtcccgttgtctcggccaatggcgagccgactgttaagttgtatacatctgtagagaatgctcagca +ggataagggtattgcaatcccgcatgacattgacctcggagaatctcgtgtggttattcaggattatgacaa +ccaacatgaacaagatcggccgacgccttctccagccccatcgcgccctttctctgtccttcgagctaatga +tgtgctttggctctc-----------------------------tctcaccgctgccgagtatgac------ +cagtccacttatggctcttcgactggcccagtttatgtttctgactctgtgaccttggt---taatgttgcg +accggcgcgcaggccgttgcccggtcgctcgattggaccaaggtcacacttgacggtcgccccctctccacc +at-----ccagcagtactcgaagaccttctttgtcc-tgccgctccgcggtaagctctctttctgggaggca +ggcacaactaaa--gccgggtacccttataattataacaccactgctagcgaccaactgcttgtcgagaatg +ccgccgggcac------cgggtcgctat-ttccacttacaccactagcctggg--------------tgctg +gtcccgtctccatctc-tgcggttgctgttttagccccccactctgcgctagcattgcttgaggataccttg +gact---------accctgcccgcg----cccatacttttgatgatttctgcccagagtgccgccctc---t +tggcctccagggctgcgctttccagtc--------tactgtcgctgagcttcagcgcct------------- +--------taagatgaaggtgggtaaaactcgggagttatagttta-tct------gctt----------gt +gcccccct--------tc------tttctg------tt-----------------gcttatt-t-------c +ttatttct----gcg----------------ttcccggctccctg--------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>DQ459342.1/17215/1-7215 |Hepatitis E virus from India, complete genome +--------------------------aggcagacca-catatg-------------t-----ggtcgatgc- +---catggaggcccaccagtttatcaaggctcctggcatcactactgctattgag---caggctgctctagc +agcggccaactctgccctggcgaatgctgtggtagttaggccttttctctcttaccagcagattgagattct +cattaacctaatgcaacctcgccagcttgttttccgccccgaggttttctggaatcatcccatccagcgtgt +catccataacgagctggagcttta---ctgccgcgccc-gctccggccgctgtcttgagattggcgcccacc +cccgctcaataaatgataaccctaatgtggtccaccgctgcttcctccgccctgtcgggcgtgatgttcagc +gttggtatactgctcccactcgcgggccggctgctaattgccgccgttccgcgttgcgcgggctccccgctg +ctgaccgcacatactgctttgacgggttttctggctgtagcttccccgccgagacgggtattgccctttact +ccctccatgatatgtcaccacctgatgttgccgaggccatgttccgccatggtatgacgcggctttatgctg +ccctccatctc-ccgcctgaggttttgctaccccctggcacatatcgcaccgcatcgtacttgctgattcat +gacggcaggcgcgttgtggtgacgtatgagggtgatactagtgctggttacaaccacgatgtctccaacctg +cgctcctggattagaaccaccaaggttaccggtgaccatcccctcgtcatcgagcgggtcagggccatcggc +tgccactttgttcttttgctcacggcagccccggagccatcacctatgccttatgtcccttacccccggtct +accgaggtctatgtccgatcgatcttcggcccgggt---------ggcaccccttccttattcccaacctca +t----------gctctactaagtcga-ccttccatgctgtccctgcccatatttgggaccgtctactgctgt +tcggggccactttggatgaccaagccttttgctgctcccgtttaatgacctatctccgcggcattagctaca +aggtcactgttggcaccctagtggctaatgaaggctggaacgcctctgaggacgccctcacagctgtcatca +ctgccgcctaccttaccatttgccaccagcggtatctccgcacccaggctatatccaaggggatgcgtcgtc +tggagcgagagcatgcccagaagtttataacacgcctttacagctggctcttcgagaagtc---------cg +gccgtgactacatccccggccgtcagttggagttctacgcccagtgtaggcgctggctttcggccggctttc +atcttgatccacgggtgctggtttttgatgagtcggccccctgc---cattgtaggactgtgatccgtaa-- +----ggcgctctcgaagttctgctgctttatgaagtggcttggtcagga------gtgcacctgtttccttc +----------------aacctgcagaaggcgtcgtcggtgaccagggt--------catgataacgaagcct +atgaggggtccgatgttgaccctgctgagtccgccattagtgacatctctgggtcctatgtcgtccctggca +cagccctccaaccgctctaccaggccctcgatctccccgctgagattgtggctcgtgcgtgccggctgaccg +ccacagtaaaggtatcccaggccgatgggcggatcgattgcgagacccttcttggtaacaaaaccttccgca +cgtcgtttgtcgacggggcggtcttagagaccaatggccc------------------------agagcgcc +acaatctctcctttgatgccagccagagcactatggccgctggccctttcagtcttacctatgccgcctctg +cagctgggctggaggtgcgctatgttgct-------gccgggctcgaccatcgggcgatttttgcc---ccc +ggtgtttcaccccggtcgacccccggcgaggtcaccgctttctgctctgccctatataggttcaaccgtgag +gcccagcgccattcgctgaccggtaacttatggttccatcctgagggacttatcggcctctttgccccgttc +tcgcccgggcatgtctgggagtcggctaacccgttttgtggggagatcacactttacacccgtacttggtcg +gaggttgatgccgtctctagcccagcccggcccgacttaggttttgtgtctgagccctctatacctagtagg +gccgccac----------------------------gcctac-----------cctggcggc---------- +---------cccttcaccc----ctccctgcac--------------cggacccttccccccccccttttgc +cccgg------------------------------------------------------------------- +-------------------------------------------------------------cgc-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctgatgagccggct------tctggt +accaccgc-----------------cgg------------------------ggccccggccataacccacc +aga----------------------------------------------tggcccggcaccgccgcc----- +-------------------tgctcttcacctacccggatggctctaaggtgttcgccggctcgctgttcgag +tcgacatgcacgtggctcgttaacgcatctaatgttgaccatcgccctggcggcgggctttgccatgcattt +taccaaaggtacccagcctctt------ttgatgctgcctcttttgtgatgcgcgacgg---tgcggccgcg +tacacactaaccccccggccaataattcatgctgtcgcccctgattataggttggaacataacccaaagagg +cttgaggctgcttatcgggagacttgttcccgcctcggtaccgctgcatacccgctcctcgggaccggcata +taccaggtgccgatcggtcccagctttgacgcctgggagcggaaccaccgccccggggatgagttgtacctt +cctgaacttgctgccaga-------------------------------------------------tggtt +tgaggccaataggccgacccg--------------------------------------------------- +------------------------------------------cccgactctcactataactgaggatgttgc +ac------------ggacagcgaatctggctatcgagcttg------------actcggccacagatgtcgg +ccgggcctgt---gctggctgtcgggttacccccggcgttgttcagtaccagtttaccgcaggtgtgcccgg +gtccggcaagtcccgctctatcacccaagccgatgtggacgttgtcgtggtcccgacgcgtgagttgcgtaa +tgcctggcgccgccgcggctttgctgcttttaccccgcatactgctgctagagtcacccaggggcgccgggt +tgtcattgatgaggctccatccctccccccccacctgctgctgctccacatgcagcgggccgccaccgtcca +ccttcttggcgacccgaatcagatcccggctattgactttgagcacgctgggctcgtccccgccatcaggcc +cgacttactccctacctcctggtggcatgttacccaccgctgccctgcggatgtatgcgagttgatccgtgg +tgcataccccatgatccagaccactagccgggttctccgttcgttgttctggggtgag------cctgccgt +cgggcagaaactagtgttcacccaggcggccaaggccgccaaccctggctcagtgacagtccacgaggcaca +gggcgctacctacacggagaccactattattgccacggcagacgcccggggccttattcagtcgtctcgggc +tcatgccattgtcgctctgacgcgccacactgagaagtgcgtcatcattgacgcaccaggcctgcttcgcga +ggtgggcatttccgatgcaatcgttaataacttt------------------------------ttcctcgc +tggtg--gcgaaattggccatcagcgcccatctgttattccccgtggtaaccctgatgctaatgttaacac- +-----cctggctgccttccctccgtcttgccagattagtgctttccaccagctggctgaggagctcggccac +agacctgtccctgttgcagctgttttaccaccctgccccgagctcgaacagggccttctctacctgccccag +gagctcaccacctgtgatagtgtcgtgacatttgaattaacagatattgtgcactgccgcatggccgccccg +agtcagcgcaaggccgtgctgtccacactcgtgggccgctacggcggtcgcacaaagctgtacaacgcttct +cactctgatgttcgcgactctctcgcccgttttatcccggccatcggccccgtgcaggttacaacctgtgaa +ttgtacgagctagtggaggccatggtcgagaagggccatgatggctccgccgtccttgagctcgacctttgc +aatcgtgacgtgtccaggatcacctttttccagaaagattgtaacaagttcaccacaggtgagaccattgcc +catggcaaagtgggccagggcatctcggcctggagcaagaccttctgcgccctctttggcccttggttccgc +gctattgagaaggctattctggccctgctccctcagggtgtgttttatggtgacgcctttgatgacaccgtc +ttctcggcggctgtggccgcagcaaaggcgtctatg---gtgtttgagaacgatttttctgagtttgactcc +acccagaataatttttcctt------------------gggcctagagtgtgctattatggaggagtgtggg +atgccgcagtggcttatccgcttgtatcatctcataaggtctgcgtggatcttgcaggccccgaaggactct +ctgcgagggttttggaagaaacactccggtgagcccggcactcttctatggaatactgtctggaacatggct +gttattacccactgttatgacttccgcgatttgcaggtggctgcctttaaaggtgatgattcgattgtgctt +tgcagtgagtatcgtcagagtccaggagctgctgtcctgatcgccggctgtggcttgaagttgaaggtggat +ttccgcccgatcggtttgtatgcaggtgttgtggtggcccccggtcttggcgcgcttcctgatgttgtgcgc +ttcgccggccggcttactgagaagaattggggccccggccctgagcgggcggagcagctccgccttgctgtt +agtgacttcctccgcaagctcacgaatgtcgctcagatgtgtgtggacgtcgtttcccgtg-------ttta +tggggtttcccctgggctcgttcataacctgattggtatgctacaggctgtcgctgacggcaaggcacattt +cactgagtcagtaaaaccagtgctcgacctgacaaattcaattttgtgtcgggtggaatgaataacatgtc- +t----------------tttgctgcgcccatgggt---------tcgcgaccatgcgccctcggcctatttt +gttgctgttcctcatgtttctgcctatgctgcccgcgc---------------------------------- +-caccgc------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggttc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----caatcccctatattcat---- +--------------ccaaccaaccccttcgcccccgatgtcaccgctgcggccggggctggacctcgtgttc +gccaacccgcccg---------------accactcggctccgcttggcgtgaccaggccca----------- +------gcgccccgccgctgcctcacgtcgtagacctaccaca---------gctggggccgcgccgctaac +cgcggtcgctccggcccatgacaccccgccagtgcctgatgtcgactcccgcggcgccatcttgcgccggca +gtacaatctatcaacatctccccttacctcttccgtggccaccggtactaacctggttctttatgccgcccc +tcttagtccgcttttacccctccaggacggtaccaatactcatataatggccacggaagcttctaattatgc +ccagtaccgggttgcccgtgccacgatccgttaccgcccgttggttcccaacgctgtcggcggttacgccat +ctccatctcattctggccacagaccaccaccaccccgacgtccgttgatatgaattcgataacttcgacgga +tgttcgtattctagtccagcccggcatagcttctgagcttgtgatcccaagcgagcgcctgcactaccgtaa +ccagggttggcgctccgtcgagacctccggggtggctgaggaggaggccacctctggtcttgttatgctttg +catacatggctcacccgtaaattcctatactaatacaccctataccggtgccctcgggctgctggattttgc +ccttgagcttgagtttcgcaaccttacccccggtaacactaatacgcgggtctcccgttattccagcactgc +tcgccaccgccttcgtcgcggtgcggatgggactgccgagctcaccaccacggctgctacccgcttcatgaa +ggatctctatttta---ctagtaccaac---ggtgttggtgagatcggccgcgggatagccctcaccctgtt +caaccttgctgacactctgcttggcggcctgccgacagaattgatttcgtcggctggtggccagctgttcta +ctcccgtcccgttgtctcagccaatggcgagccgactgttaagctgtatacatctgtagagaatgctcagca +ggataagggtattgcaatcccgcatgatatagacctcggagaatctcgtgtggttattcaggattatgacaa +ccaacatgaacaagaccggccgacaccttcgccagccccgtcgcgacctttctctgttcttcgagctaatga +tgtgctttggctctc-----------------------------tctcaccgctgccgagtatgac------ +cagtccacgtatggctcttcgactggcccggtttatgtttctgactctgtgaccttggt---taatgttgcg +accggcgcgcaggccgttgcccggtcgctcgattggaccaaggtcacacttgacggtcgtcctctctccacc +at-----ccagcagtactcgaagaccttctttgtcc-tgccgctccgtggcaagctctccttctgggaggca +ggtacaactaag--gccgggtacccttataattacaacaccactgctagcgaccaactgcttgtcgagaatg +ccgccgggcac------cgggttgctat-ctccacttacaccactagcctggg--------------tgctg +gccccgtctccatttc-tgcggttgccgtcttagccccccactctgcgctagcattgcttgaggataccctg +gatt---------accctgcccgcg----cccatacttttgatgatttctgcccagagtgccgccccc---t +tggcctccagggctgcgctttccagtc--------tactgtcgctgagctccagcgcct------------- +--------taagatgaaggtgggtaaaactcgggagttatagttta-ttt------gctt----------gt +gcccccct--------tc------tctctg------tt-----------------gcttatt-t-------c +tcttttct----gcg----------------tttcgcgctccctg---------------------aaaaaa +aaaaaaa---------------aaaaaaaa------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>AY723745.1/17262/1-7262 |Hepatitis E virus isolate INDSW0001, complete genome +----------------------------gcagacca-cgtacg-------------t-----ggtcgacgc- +---catggaggcccaccagttcataaaggctcctggcgtcactactgctattgag---caggcagctctagc +agcggccaattccgccttggcgaatgctgtggtggtccggccttttttatcccggctacagacagagatact +cataaacctgatgcaaccccggcagctagttttccggcccgaggttttgtggaatcacccaattcagcgtgt +gatccacaatgagcttgagcagta---ttgccgagccc-gggctggtcgctgccttgaagtgggcgcccacc +cacgttctattaatgacaaccctaatgttctgcaccgctgtttccttaaacctgtcggtcgcgatgtccagc +ggtggtacaccgcccctactcgtggccctgcggcaaactgccgccggtctgccctccgtgggcttccacctg +ttgatcggacttattgttttgatggtttttccggctgcacatttgccgctgagacagggattgctctctact +cactgcacgacttgtggcctgctgatgttgctgaggcaatggcccgccatggcatgacccggctgtatgcag +cccttcatctc-cctccagaagtgctactcccacctggcacttaccatactacgtcataccttttgattcat +gatggggaccgtgcggtgattacgtatgagggggattctagcgctggctataaccatgatgtgtctatcctg +cgcgcctggattcgtaccactaaggtcacaggtgatcacccgcttgttatcgaacgagtccgtgccgtgggg +tgccattttgtgctcctcctcacagccgcacccgagccatcgccgatgccctatgtcccatatcctcgctca +accgaggtgtatgtccggtccatttttggacctggt---------ggctcgccatccctttttccatctgcc +t----------gctcgactaagtcta-catttcacgctgtccctgtgcatatatgggacaggcttatgcttt +ttggtgctaccctagatgatcaggccttgtgctgttcgaggcttatgacgtacttgcgtggcattagttata +aggtcacagtcggtgcccttgttgccaacgagggctggaatgcctctgaggatgcactgactgctgtgatta +ctgcggcttacctcactatttgccaccagcggtatctccgcacacaggctatctcgaaggggatgaagagac +ttgagcttgaacatgcccagaagtttataacacgcctctatagttggctgtttgagaagtc---------tg +ggcgtgattacattcctggccgccaacttcaattctacgcccagtgccgtcggtggctgtctgccggcttcc +accttgaccctcgcgtgcttgtttttgatgaggcagccccctgc---cgctgtcgcagctttcttcgtaa-- +----ggctgcgcacaagttttgctgcttcatgcggtggctcggtcagga------ttgtacttgttttctcc +----------------agcctattgaggggagggttggtgagcaaggc--------tatgataatgaggcgt +ttgaggggtcggatgtggaccctgctgaagaagctactgtaagcatttctgggtcatatattgttaccggta +gtcagctccagcctctttatcaggcgctcggtataccttccgacctcgccgcgcgcgccagccggctcactg +ctaccgtcgaggtctccgatgctgacggttgtctcacctgtaagactattatgggcaataagaccttttcaa +cagttttcaccgacggtgcccagttggaggccaacgggcc------------------------agaacagt +atgtcctgtcgttcgacttagccaagcagactatggccgccggcccgcacagtctcagttttaccttgacat +ctgcgggtctcgaggtccatgttgtttcc-------gctgggcttgattgcaaggctgtttttccg---cca +ggtgttgcgacccctgctgcttctggagaggtctccgccttttgttcggccttgtataggtttaatcgttgt +gtccagcggcattctctcattgggggcctgtggtaccatcctgaggggctggttggtttattcccgcccttc +tcccccggccatagttgggagtctgctaaccctttttgtggtgagagcaccctttatacccgcacttggtcg +gtatcgggtttttctagctgtttttctccacttgatccttgtgttccggacgtgccgcccccggcc---gag +actgctac----------acccctgactgttaatgt-tttgccc---------ccagtggct-----ccagt +tcaatctcagcccccagcc----cccgagcggg---tgg--------------------cgcccccgcccga +ctctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcgatggtagtgctggctctacattg +cctgacgcccctatg---------------tca-------------------tctccggcgccggtgcagtc +tgtaacccg--------------------------------------cccatctgggccccgtcggcg---- +-----------------gctacttcatacttatcctgatggctcgagggtgtatgccggctctctttttgag +tctgagtgcacttggctggttaatgcgtccaaccctggccaccgccctggcggtggcctctgccatgcgttc +taccagcgatttccagagtcat------ttgaccccgccgaatttgttatgtcagatgg---gcttgcggcc +tacactctgacccctcggcctattattcatgctgttgcccccgactatcgggtcgaacataaccctaagcgt +cttgaggccgcctatcgggagacttgctcccgtcgtgggaccgccgcctaccccctgcttggcgctggtata +tataaggttcccgttgggttgagttttgatgcttgggaacgtaatcaccgccctggggatgagctctattta +actgagcctgctatagcc-------------------------------------------------tggtt +tgaggccaatcggcctactct--------------------------------------------------- +------------------------------------------tcctgctctgactatctctgaggacacggc +gc------------gcacagctaatttggcgctggagttgg------------acgcggctactgaggttgg +ccgcgcttgt---gctggttgccgtgttgaacccggcgttgttcactaccagtttacggcgggtgtccctgg +gtctggtaagtcccgatcgatccaacaaggtgatgtggacgtgattgtggttccaacccgtgagttgcgcaa +ctcatggcggcgtcgtgggtttgcagcttatacacctcacactgcagcccgcgtgactcgcggccgtagagt +ggttattgatgaggccccgtcgcttccaccacacttgctcctgctgcatatgcagcgggcttcgtcagtcca +cctccttggtgaccccaatcaaatccccgccattgattttgagcatgctggccttgttcctgctatccggcc +cgagctggttccaacaaagtggtggcacctcactcatagatgtcctgcggacgtctgtgagttaatccgtgg +tgcgtatccgaagattcagactgcaagccgcgtcctccgctccctattttggggcgag------ccccccgt +cggccagaaattagtgttcacccaggcggcgaaggccgctaatcctggtgctatcacggttcatgaggctca +aggtgcaacatttactgagaccacaattatagccacggcagatgcccgcgggctgatccaatcttcaagggc +ccatgcgattgtggctttgactcgccacacagagaagtgtgtggtggttgacgcccccgggcttcttcgtga +agtcggcatctccgatgccatagtgaataatttc------------------------------tttctttc +tggcg--gccagattggccagcatcgtccgtcagttatcccccgtggtactattgatagcaatgttgatac- +-----acttgacgcgtttccaccctcctgccagttcagtgcctaccaccagctggccgaagagcttggccat +cgtccggccccaattgccgctgtcctgcccccttgcccggagcttgaacagggcctgctctatatgcctcag +gagctgactacatcggatagtgttctcacctttgagctcacggatatagtccactgtcgtatggcggccccc +agccagcgcaaagcggtcttgtcgactcttgttggtaggtatggccgccgtacaaagctgtacgaggccgcc +catgcagacgtccgcgggtctctcaatcatcttatccctgagcttggccctatccatgtcaccacctgcgag +ctttatgagctcgttgaggccatggtcgagaagggccagggtggctccgcagttttggagctcgatctgtgt +aaccgtgatgtgtcccgaataacattcttccagaaagattgtaataagtttacaacaggtgagacgatagca +cacgggaaagttggccaggggatatctgcatggagtaagaccttttgcgccttgtttggcccctggtttcgt +gctatcgaaaaggagatcctggcggcactcgcacctaatattttctacggtgatgcctatgaggattcagtc +ttcgccgccgctgttgcgggtgcccctggctgtaaa---gtttttgagaatgatttctctgagtttgacagt +acccagaataatttctcact------------------tggcctagagtgtataattatggaggagtgtggc +atgcctcagtggatggtccggctctaccatctcgttcgctctgcctgggttctgcaggccccgaaagagtcc +ttgcgaggtttttggaagaagcattctggtgaaccaggcactttgttatggaataccgtctggaacatggca +gtcattgcacactgctatgagttccgtgacttaaaagttgcagcatttaaaggggacgattctgttgtgctt +tgtagcgattaccggcagagccgtaatgctgctgccttaatcgccggttgtgggttaaagctgaaagtggac +tttaggcccattgggctgtatgcaggtgttgtagtggccccgggtcttgggacccttcctgatgttgttagg +tttgctgggcggctctcggagaaaaactgggggccgggttcagagagggcggagcagctccgtctggctgtt +tgtgattttctgcggaagttaacgaatgttgcccaggtctgtgttgatgttgtttcgcagg-------tcta +tggtgttagccctggtttagtacataacctaatcgggatgcttcagaccattgctgatggtaaggcccattt +tactgagacagtcaaaccagttcttgatctcactaattccattatacatcgggtggaatgaataacatgtct +t----------------tttgctctgtgcatggag---------atgccaccatgcgctctcgggctctttt +gtttctgctcctcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctgacc------------gtcgccgcgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgcctctgacatttcaaccgcagccggggctggagctcgccctc +ggcagccagcccg---------------cccactcggctccgcttggcgcgatcagtccca----------- +------gcgccccgccgctcccgcccgtcgtcgatctgcccca---------gctggggcttcgccgttgac +ggccacggctccggctcctgatactgccccggtccctgacgtcgactctcgtggcgccatattgcgtcgcca +gtataatttgtctacgtcccctcttacatctactattgctactggcactaaccttgtactatatgctgcccc +gcttagtcctttgctcccgctccaagatggcactaatactcacattatggcaactgaggcctcgaattatgc +tcagtaccgtgttgttcgggccactatacggtaccgtcctttggtgccgaatgctgttggcgggtatgctat +atctatctccttctggcctcagactacaaccaccccaacgtctgtggatatgaattccattacttctactga +tgtccgcattcttgttcaacctggtatagcttctgagttggtgatcccaagtgagcgcttgcattaccgtaa +tcaaggctggcgctcggttgagacctccggtgtcgcggaggaggaggcgacctctggcctagttatgttgtg +tatccatggatcacctgtgaattcttacactaatacaccttacactggcgccctcggtctgcttgattttgc +actcgaactcgagtttcgtaacttaacacctggcaatacgaacacccgtgtgtctcgttactcgagcagcgc +gcgtcataagttgcgccggggggctgatggcactgctgagttaaccactactgctgctacacgttttatgaa +ggacctccatttta---ctgggaccaac---ggtgttggtgaagttggtcgtggtatagcgctgaccttatt +taatcttgctgatacacttctcggcgggcttccgacagaattgatttcgtcggctggtggccagttatttta +ctctcgccccgttgtctcagccaatggcgagccgactgtgaaactttacacctcagtcgagaatgctcagca +ggacaagggtatagctatcccacatgatattgatcttggtgagtcgcgggttgtcatccaggattatgataa +ccaacacgaacaggaccgtcccactccttctcctgccccttctcgtcctttctcagttcttcgtgctaatga +tgttctctggctttc-----------------------------ccttacagctgctgagtacgat------ +cagactacgtatggttcttccaccaaccctatgtatgtttctgatactgtgacatttgt---taatgtcgcg +actggcgctcagggggtctcccgttcccttgattggtccaaggttacccttgatgggcgcccgcttaccact +at-----ccagcagtattctaaaactttctttgtcc-ttcctctccgtggtaagctctccttttgggaggct +ggcaccaccaag--gctggctatccctataattataatgctactgctagtgatcagattctgattgagaatg +cagccgggcac------cgtgtctgcat-ctctacctatacaactaatttagg--------------ttctg +ggcctgtttctatctc-tgctgttggtgttctcgcacctcactctgcgctggccgttcttgaggacaccact +gact---------accccgctcgtg----ctcatacctttgatgatttctgccctgagtgccgtgcac---t +cggtctccagggctgtgcctttcagtc--------aactgttgctgagctccagcgtct------------- +--------taaaatgaaggtgggtaaaacccgggagtactgattta-tt----ct-ttct----------gt +gcct-tcc--------tt------ctgtc--ctgt-tt--cttt--------------tatt-t-------t +ccttttct----gcg----------------tttcgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>AY575858.1/17257/1-7257 |Hepatitis E virus clone pSHEV2, complete genome +---------------------------ggcagacca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccaacagttcattaaggctcctggcattactactgccattgag---caggctgctctggc +tgcggccaactccgccttggcgaatgctgtggtggttcggccgtttttatctcgtgtacaaactgagatcct +tattaatttgatgcaaccccggcagttggttttccgccctgaggtactttggaatcatcctatccagcgggt +aatacataatgaactggaacagta---ctgccgagccc-gggctggtcgttgtctggaagttggagcccatc +cgagatctattaatgacaatcccaacgtcctgcaccggtgcttccttagaccggttggccgagatgtccagc +gctggtactctgcccccacccgtggccctgcggccaattgtcgccgctccgcgctgcgtggccttccccccg +tcgaccgcacttactgttttgatggattctctcgttgtgctttcgctgcagagaccggtgtggccctctact +ctttacatgacctttggccagctgatgttgcggaggctatggcccgccacgggatgacacgcctatacgccg +cactgcacctt-cctcccgaggtgctgctaccacccggcacctaccacacaacctcgtacctcctgattcac +gacggtgaccgcgctgttgtgacttatgagggcgatactagtgcgggctataaccatgatgtctccatactc +cgtgcgtggatccgtaccactaaaatagttggtgaccacccgttggttatagagcgtgtgcgggccattggc +tgtcattttgtgctgctgctcaccgcagcccctgaaccgtcacctatgccttatgtcccctaccctcgttca +acggaggtgtatgttcgatccatatttggccctggc---------ggctccccatccttgtttccgtcagcc +t----------gctctactaaatcta-catttcatgctgtcccggttcatatctgggatcggctcatgcttt +ttggtgccaccctggatgaccaggcattttgttgttcacggctcatgacctacctccgtggtattagctaca +aggtcactgtcggtgcgcttgtcgctaatgaggggtggaacgcctctgaagatgctcttactgcagtgatta +ctgccgcttatctgactatttgccatcagcgttatcttcgcacccaggcgatatccaagggcatgcgccggc +tggaggttgagcacgcccagaaatttatcacaagactttacagttggctatttgagaagtc---------tg +gccgtgattatatccccggccgtcagcttcagttctacgcacagtgccggcggtggttatctgcaggcttcc +acctagaccccagggtgcttgtttttgatgaatcagtgccatgc---cgctgcaggacgtttttgaagaa-- +----agtcgcaggtaagttctgctgttttatgcggtggttagggcagga------gtgtacctgtttcttgg +----------------agccagccgaaggcttggttggcgactatggc--------catgacaacgaggcct +atgagggttctgaggtcgacccggctgaacctgctcatcttgatgtttctgggacctatgccgttcacgggc +gccagcttgaggctctctatagggcacttaatgtcccacatgacatcgccgctcgagcctcccgcctaacgg +ctactgttgagctcactgcaagcccagaccgtttagagtgccgcactgtgcttggtaataagaccttcagga +cgacggtggttgatggcgcccatcttgaggcgaatggtcc------------------------tgagcagt +atgtcctatcattcgacgcctcccgccagtctatgggggccgggtcacatagcctcacttatgagctcaccc +ctgccggcctgcaggtcaggatttcatct-------aatggcctggattgcacagccacattcccc---ccc +ggcggcgcccctagcgctgcgccgggggaggtggcggccttttgcagtgccctttatagatataataggttc +acccagcggcattcgctgaccggtgggttatggctacaccctgagggattgctgggcatcttcccccctttc +tcccctgggcacatttgggagtctgctaaccctttctgcggggaggggactttgtatacccggacttggtca +acatctggcttttctagcgatttctccccccctgaggcggccgcccccgttttggccgctgcccc----ggg +gctgcccc---accctaccccacctgttagtgacat-----------------ttgggtgtt---------- +---------accaccacct----tcagaggagt--------------ctcaggtcgatgcggcatctgtgcc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctcctgagcccgctggattacccagc +tccattgtgcttacc----------------------ctccccccccccctccctcctgtgcgtaagccacc +aacaccccc--------------------------------------gccttcccgcactcgtcgtc----- +-------------------tcctctacacctatcccgacggggcaaaggtgtatgcggggtcattgtttgaa +tcagactgtaactggctggttaatgcctcaaacccgggccaccgccctggaggtggcctctgccatgctttt +taccaacgtttcccagaggcgt------tttacccgactgagttcattatgcgtgaggg---ccttgcagca +tataccctgaccccgcgccctatcattcatgcagtggcccccgactatagggttgagcagaatccgaagagg +cttgaggcagcgtaccgggagacttgctcccgtcgtggcaccgccgcctacccgcttctaggctcgggtata +taccaggtccctgtcagcctcagctttgatgcctgggaacgcaatcaccgccccggcgatgagctttatttg +actgagcccgccgcagcc-------------------------------------------------tggtt +cgaggctaataagccggcgca--------------------------------------------------- +------------------------------------------gccggcgcttactataactgaggacacagc +cc------------gtacggccaacctagcgttagagatcg------------atgctgccacagatgttgg +ccgtgcttgt---gccggctgcactatcagtcctgggattgtgcactatcagttcactgccggggtcccagg +ctcgggcaagtctcggtccatacaacagggagatgtcgatgtggtggtcgtgcccacccgggagctccgtaa +tagttggcgtcgccggggttttgcggctttcacacctcacacagcggcccgtgtcactatcggtcgccgcgt +tgtgattgatgaggctccatctctccctccacacctgttgctgttacacatgcagcgggcctcctcggtcca +tctccttggtgacccaaatcagatccctgccattgattttgaacacgccggcctggttcccgcgatccgccc +tgagcttgctccaacgagctggtggcacgttacacaccgttgcccggccgatgtatgcgagctcatacgcgg +agcctaccctaaaatccagaccacgagccgtgtgctgcggtccctgttctggaacgaa------cctgctat +cggccagaagttggtcttcacgcaggctgctaaagctgctaaccctggtgcgattacggttcatgaagctca +gggtgccacttttacagagaccacaattatagccacggccgatgccaggggccttatccagtcatcccgggc +tcacgctatagtcgcactcacccgccacactgagaagtgtgttattctggatgctcccggcctgctgcgtga +ggtcggcatttcggatgtgattgtcaataacttt------------------------------ttccttgc +tggtg--gagaagtcggccatcaccgcccttctgtgataccccgcggtaaccctgatcagaacctcgggac- +-----tctacaggccttcccgccgtcctgccagattagtgcttaccaccaattggctgaagaattaggccac +cgtccggctcctgttgccgccgtcttgcccccttgccctgagcttgagcagggcctgctctatatgccacaa +gagcttactgtgtctgatagtgtgttggtttttgagctcacggatatagtccactgtcgcatggccgctccg +agccagcgaaaggctgttctctcaacacttgtagggagatacggccgtaggacgaaattatatgaggcagcg +cattcagatgttcgtgagtccctggccaggttcattcccactattgggcctgttcaggccaccacatgtgag +ttgtatgagttggttgaggccatggtggagaagggacaggacggctccgccgtcctagagctagacctttgc +aatcgtgacgtatcgcgcatcacatttttccaaaaggattgcaacaagtttacaactggtgagactatcgcc +catggcaaggttggtcagggtatatcggcctggagtaagaccttctgtgccctgtttggcccgtggttccgt +gccattgaaaaagaaatactggccctactcccgcctaatatcttttatggcgacgcctatgaggaatcagtg +ttcgctgccgctgtgtccggggcggggtcgtgcatg---gtatttgaaaatgacttttcagagtttgacagt +acccaaaataatttctccct------------------tggccttgagtgtgtggttatggaggagtgcggc +atgccccagtggctaattaggttgtatcatctggttcggtcagcctggattttgcaggcgccgaaggagtct +cttaagggtttctggaagaagcattctggtgagcctggtacccttctctggaacaccgtctggaacatggcg +attatagcacattgttatgagtttcgtgactttcgtgttgccgccttcaagggtgatgattcggtggtcctt +tgtagtgactaccgacagagccgtaatgcggctgccttaattgcaggctgtgggctcaaattgaaggttgac +taccgccctattgggctgtatgccggggtggtggtggcccctggtctggggacactgcctgatgttgtgcgt +ttcgccggtcggttgtctgaaaagaattggggccccggcccagagcgtgctgagcagctgcgtcttgctgtt +tgtgacttccttcgagggttgacgaatgttgcgcaggtttgtgttgatgttgtgtcccgtg-------ttta +tggagttagccccgggctggtgcataaccttattggcatgctgcagactattgccgatggcaaggcccactt +tacagagactattaaacctgtgcttgaccttacaaactctatcatacagcgggtggaatgaataacatgtc- +t----------------tttgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gttgttgctcttcgtgcttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcaacggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgctgccgatgtcgtttcacaacccggggctggagctcgccctc +gacagccgccccg---------------cccccttggctccgcttggcgtgaccagtccca----------- +------gcgcccctccactgccccccgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgctgtatcaccggcccccgacacagctcctgtacctgatgttgactcacgtggtgctatcctgcgccggca +gtacaatctgtctacgtccccgctcacgtcatctgtcgctgctggtaccaacctggttctctatgccgcccc +gctgaatcctctcttgcccctccaggatggcaccaacactcatattatggctactgaggcgtccaattatgc +tcagtatcgggttgttcgagctacgatccgttatcgcccgctggtgccaaatgctgttggtggctatgctat +ctctatttctttctggcctcaaactacaaccacccctacttcagttgacatgaactctattacctccactga +tgtcaggattttggttcagcccggtattgcctccgagttagtcatccctagtgagcgccttcattaccgcaa +tcaaggctggcgctctgtagagaccacgggcgtggccgaggaggaagctacctccggtctggtaatgctttg +cattcacggttctcctgttaactcctatactaacacaccttacactggtgcattggggctccttgattttgc +attagagcttgaattcagaaatttgacacccgggaacactaacacccgtgtttcccggtacaccagcacagc +ccgccatcggctgcgccgcggtgctgatgggaccgcagagcttaccaccacagcagccacacgtttcatgaa +ggacttgcatttca---ccggcacgaac---ggcgttggtgaggtgggtcgcggtatagctctaacactgtt +taaccttgctgatacgcttcttggtggtttaccgacagaattgatttcgtcggccgggggccaactgtttta +ctcccgccctgtcgtctcggccaatggcgagccgacggttaagttatatacatctgttgagaatgcgcagca +ggacaagggcattaccatcccacacgatatagatctgggtgattcccgtgtggttattcaggattatgataa +ccagcacgagcaagaccgacctactccgtcaccagccccctctcgccctttctcagtccttcgcgccaatga +tgttctgtggctctc-----------------------------cctcaccgccgctgagtacgat------ +cagactacatatgggtcgtccaccaaccctatgtatgtctccgatacggtcacgctagt---taatgtggcc +actggtgctcaggctgttgcccgctctcttgattggtctaaagtcactctggatggccgccccctcactacc +at-----tcagcagtattcaaagacattctatgttc-tcccgctccgcgggaagctgtccttttgggaggct +ggtaccactaag--gccggctacccgtataattataataccactgctagtgatcaaattttgattgagaacg +cggctggccac------cgtgttgctat-ctctacctataccactagcttggg--------------tgccg +gccctacctcgatttc-cgccgttggtgtgctagccccacactcggctctcgccgtccttgaggatactgtt +gatt---------accctgctcgtg----ctcatacttttgatgatttctgcccggagtgccgcaccc---t +tggtttgcagggttgtgcattccagtc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattaa-tt----c--c--t-ttt------gt +gccc-cct--------tc-atag-cttcctttggt-tt--------------------tatt-t-------c +ttatttct----gc----------------tttccgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaa----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>AY204877.1/17170/1-7170 |Hepatitis E virus strain T3 from Chad polyprotein gene, partial cds; and ORF3 and structural protein genes, complete cds +------------------------------------------------------------------------ +------------------gttcattaaggctcctggcatcactactgctattgag---caggctgctctagc +agcggccaattctgccttggcgaatgctgtggtagttaggccttttctctctcaccagcagattgagattct +cattaacctaatgcaacctcgccagcttgttttccgtcccgaggttttctggaatcaccctatccagcgcgt +tattcataacgagctggagcttta---ttgccgcgccc-gctccggccgttgccttgagattggcgctcatc +cccgctcaataaatgataatcctaatgtggtccaccgctgctttctccgccctgtcgggcgtgatgttcagc +gttggtatactgctcctacccgcgggccggctgctaactgccggcgttccgcactgcgcgggcttcccgctg +ctgaccgcacctactgccttgatgggttttctggctgtagtttcccagccgagacgggcattgccctctact +ccctccacgatatgtcaccatccgatgtcgcagaggccatgttccgccatggcatgacgcggctttatgctg +ccctccatctc-ccacctgaagtcctgttgccccctggcacataccgtaccgcgtcgtaccttctaattcat +gatggcaggcgtgttgtggtgacgtatgagggtgataccagtgctggctataaccatgatgtttctaaccta +cgttcctggatcagaactaccaaggtcaccgggaaccaccccctcgttatcgagcgggttagggccattggc +tgccactttgttctcttgctcacggccgccccggagccatctcctatgccttatgttccttacccccggtct +accgaggtctatgttcggtcaatcttcggcccgggt---------ggtaccccctccttgtttccaacctca +t----------gctctactaagtcaa-ctttccatgctgttcctgtccatatctgggatcgtctcatgttgt +tcggggccaccctggacgatcaggctttttgctgctcccgtcttatgacctatctccgcggcattagctaca +aggttactgtcggtacccttgtggccaatgagggttggaacgcctccgaggacgccctcacagctgttatta +ctgccgcttatctaaccatatgtcatcagcgctatctccgcacccaggctatatctaaggggatgcgccgtc +tggagcgggagcacgcccagaagttcattacacgcctttacagttggctctttgagaagtc---------tg +gccgtgattacatccctggccgtcagctggagttttacgcccagtgtaggcgctggctctccgctggcttcc +accttgacccacgggtgttggtttttgacgagtcggccccctgc---cactgtaggaccatgatccgtag-- +----ggcggtctcaaagttttgctgttttatgaagtggcttggccaaga------gtgtacctgcttcctac +----------------agcctgcagaagggggtgttggtgaccagggc--------catgataacgaagcct +atgaggggtccgatgttgatcctgctgagtctgccacttgtgacatatccgggtcctatgtggtacctggtg +ctgcccttcaaccgctctaccaagctcttgatcttcccgccgacattgtggcccgtgcaggccggctgaccg +ccacagtaaaggtttcccaggccgaggggcggatcgactgtgagaccctcattggtaataaaactttccgca +cgtcgttcgtcgacggggcggtcttagagaccaacggccc------------------------agagcgcc +acaatctctcttttgacgtcagtcagagtaccatggccgccggtccttttagtcttacctacgccgcctctg +ctgctgggttggaggtgcgctatgttgct-------gccgggcttgaccaccgggcggtttttgcc---ccc +ggcgtttcgccccggtcggctcccggtgaggtcaccgccttctgctccgccctatacaggttcaatcgtgag +gcccagcgccattcattgaccggcaacttctggttccaccctgaagggctccttggcccctttgccccgttc +tcgcccgggcatgtctgggagtcggccaacccgttttgtggtgagagcacactctacacccgtacttggtcg +gaagttgatgctgtctccggcccggcccagcccgacttaggccctgtatctgaaccctccatgtctagcagg +gccgccac----------------------------acccac-----------cttggcggc---------- +---------tcccttaccc----tctgttgtat--------------taggcccctcccctcctccttctgc +cccgg------------------------------------------------------------------- +-------------------------------------------------------------cgt-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ccagcgagccggcc------cctggt +gctagcgc-----------------cgg------------------------gaccccggccataacccacc +aga----------------------------------------------tggcccggcatcgccgcc----- +-------------------tgctttttacctatccagatggttctaaggtgttcgccggctcgttgttcgag +tcggcgtgtacgtggcttgttaatgcgtctaatgttgaccatcgccctggcggtgggctttgccatgcattc +taccagaggtaccccacctcct------ttgatgctgcctcttttgtgatgcgtgacgg---cgcggccgcg +tatacactaactccccggccaataatccatgccgtcgcccctgattataggttggaacataacccaaaaagg +cttgaggctgcctatcgggagacttgctctcgcctcggcaccgccgcatacccgctcctcgggaccggcata +tatcaggtaccaatcggtcctagctttgacgcctgggagcggaaccaccgccccggggatgagctctatcta +cctgagcttgctgctaaa-------------------------------------------------tggtt +cgaggccaataagccgacccg--------------------------------------------------- +------------------------------------------tccgactctcactataactgaggatgttgc +ac------------ggacggcgaacttggccatcgagcttg------------attcagccacagatgtcgg +ccgggcctgc---gctggctgccgagtcacccccggtgttgtgcagtaccagtttaccgcaggtgtgcccgg +gtctggcaagtcccgttctgttatccaaactgacgtggatgttgttgtggttccgactcgggagttgcgtaa +cgcctggcgccgccgcggcttcgctgcttttaccccccacactgccgctagagttacccaggggcgccgggt +cgttattgatgaggctccatcactcccccctcacctgctgctgctccatatgcagcgggccgccaccgtcca +ccttctcggtgacccgaaccagatcccagccattgacttcgaacacgctgggctcgttcccgccatcaggcc +tgatctagcccccacctcctggtggcacgtcacccaccgctgtcccgcggatgtatgtgagctgatccgtgg +tgcataccccatgatccagaccactagccgggtcctccgttcgttgttttggggcgaa------cctgccgt +cggccagaaattagtgttcacccaggcggccaaggctgcgaaccccggctcggtgacggttcatgaggcgca +gggcgctacctacacagagactaccatcattgcaacagcagacgcccgtggcctcattcagtcgtcccgggc +tcatgccattgttgccctgacgcgccacactgagaagtgcgtcattattgacgcacctggtctgcttcgtga +ggtgggcatctctgacgcaattgttaataacttt------------------------------ttcctcgc +tggag--gcgaggttggccaccagcgcccgtctgttattccccgcggcaatcctgacgctaatgtcgacac- +-----cctggccgccttcccaccgtcttgccagattagtgccttccatcagctggctgaagagctcggccac +agacccgcccctgtcgcagctgttttaccaccctgccctgagcttgaacagggccttctctacctgcctcag +gaactcaccacctgtgacagtgttgtaacatttgagttgacagatattgtgcattgtcgcatggccgccccg +agccagcgcaaggccgtgctctccacacttgtgggccggtacggccgtcgcacgaagctttataatgcctct +cattctgatgttcgcgattctctcgcccgcttcatcccgaccattggtcctgtacaggtcacaacctgtgag +ctgtacgagttagtggaggccatggttgagaagggccaggatggctccgccgtccttgagctcgatctctgt +aaccgcgatgtgtccaggatcaccttcttccagaaagactgtaataagtttactactggggagaccattgcc +cacggcaaagtgggtcagggtatttcggcatggagcaagactttctgtgccctctttggcccctggttccgt +gctattgagaaggccatcttggctctgctcccccagggcgtattctatggggacgcttttgatgacactgtc +ttctctgcggctgtggccgctgcgagggcgtccatg---gtgtttgagaatgacttttctgagttcgattcc +actcagaataatttctcctt------------------gggccttgagtgtgctattatggaggagtgtggg +atgccgcagtggctcatccgcctgtaccatcttataaggtccgcatggatcttgcaggccccgaaggaatct +ctgcgcgggttctggaagaaacactccggtgagcctggcactctcttatggaatactgtctggaatatggcc +gttatcacccactgttatgacttccgggacttgcaagtggctgcttttaaaggtgatgattcgatagtgctt +tgcagtgagtaccgtcaaagtccgggtgctgcagtcctgattgctggctgcggcttgaagctgaaggtggac +ttccgcccgatcggtttgtacgcgggtgttgttgtggcccccggccttggtgcgcttcctgacgtcgtgcgc +ttcgccggtcggctcactgagaagaattggggccctggccctgagcgggcggagcagctccgccttgctgtg +agtgattttcttcgcaagctcacgaatgtagcccaaatgtgtgtggatgttgtttctcgtg-------ttta +tggggtctccccgggacttgttcataacctgatcggcatgctacagactgtcgccgatggcaaggcccattt +taccgagtctataaaaccagtgctcgacttgacaaattcaatcttgtgtcgggtggaatgaataacatgtc- +t----------------tttgctgcgcccatgggt---------tcgcgaccatgcgccctcggcctatttt +gctgctgctcctcatgtttctgcctatgttgcccgcgc---------------------------------- +-caccgc------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggttc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----caatcccctatattcat---- +--------------ccaaccaaccccttcgcccccgatgtcaccgctgcggccggggctggacctcgtgttc +gccaacccgcccg---------------accactcggctccgcttggcgtgaccaggccca----------- +------gcgccccgccgctgcctcacgtcgtagacctgccaca---------gctggggccgcgccgctgac +cgcggtcgctccggcccatgacaccccgccggtgtccgatgttgattctcgtggcgctatcttgcgccgaca +gtataatctttcaacatcccccctcacttcttccgtggccactggcaccaacttggttctttatgccgctcc +ccttagcccgcttttaccccttcaggacggcaccaatacccatataatggccacggaagcctctaattatgc +ccagtatcgggttgttcgtgccacaatccgctaccgtccgctagtccccaatgctgttggtggctatgctat +ttccatctcgttttggccacagaccaccactaccccgacgtccgttgacatgaattccataacctcgacgga +tgttcgtatccttgtccagcccggtatagcctccgagcttgtgatcccaagtgagcgcctgcactatcgcaa +ccagggctggcgttccgttgagacctccggggtggcggaggaggaggccacttctggccttgttatgctctg +tatacatggctcacctgtgaactcttatactaatacaccctacaccggtgccctcgggctgctggatttcgc +ccttgagcttgaattccgcaacctcacccctggtaacaccaatacgcgggtctcccgttactccagcactgc +ccgccaccgtcttcgccgcggcgcagacggcaccgctgagcttaccaccacggctgcaacccgcttcatgaa +agacctttattttt---ctagcactaat---ggtgtcggcgagatcggccgcgggatcgcccttaccctgtt +taaccttgctgacactctgcttggcggcctaccgacagaattgatttcgtcggccggtggccaactgttcta +ttcacgcccagtcgtctcagccaatggcgagccgaccgttaagctgtatacatctgtagagaatgctcagca +ggacaagggtattgctatcccgcatgatatcgacctcggggaatcccgtgtagttatccaggactatgacaa +ccaacatgagcaagaccgaccgacaccttccccagccccgtcgcgccctttctctgtccttcgggctaatga +tgtgctttggctttc-----------------------------tctcaccgctgccgagtatgac------ +cagtccacctacggctcctcgactggcccagtctatgtctctgactctgtgaccttggt---caatgttgcg +accggcgcgcaggccgttgcccggtcgctcgactggaccaaggtcacactcgatggtcgccctctatctact +at-----tcagcagtattcgaagactttcttcgtcc-tgccgcttcgtggcaagctctccttctgggaggcg +ggtactactaaa--gccgggtacccttataattataataccactgctagcgaccaattgctcatcgagaacg +tcgctgggcat------cgggtggctat-ttccacctataccactagcttagg--------------tgcag +gccctgtttccatctc-cgcggtcgctgttctagccccccactctgctttagcactgcttgaggataccttg +gatt---------accctgcccgcg----ctcatacttttgatgatttttgcccggagtgccgccccc---t +tggcctccagggctgtgcttttcagtc--------tactgtcgctgagctccagcggct------------- +--------taagatgaaggtgggtaaaactcgggagttatagttta-ttt------gctt----------gt +gcccccct--------tc------tttctg------tt-----------------tcttatt-t-------t +tcttttct----gcg----------------ttccgcgctccctg---------------------aaaaaa +aaaaaaa---------------aaaa---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>AY230202.1/17212/1-7212 |Hepatitis E virus from Morocco, complete genome +----------------------------gcagacca-catatg-------------t-----ggtcgatgc- +---catggaggcccaccagtttattaaggctcctggcatcactactgctattgag---caggctgctttagc +agcggccaattctgccttggcgaatgctgtggtggttaggccttttctctctcaccagcagattgagattct +cattaacctaatgcaacctcgccagcttgttttccgccccgaggttttctggaatcatcccatccagcgcgt +tatccataatgagctggagctcta---ctgccgcgctc-gctccggccgctgtcttgagattggcgctcatc +cccgctcaataaatgacaatcctaatgtggtccaccgctgttttctccgccctgttgggcgtgatgttcagc +gctggtatactgctcccactcgcggaccggctgctaattgccggcgttctgcactgcgtgggctccctgctg +ccgaccgcacctactgttttgatgggttttctggctgcagttttcccgctgagacaggcatcgccctctatt +ccctccacgacatgtcgccgtctgatgtcgccgaggccatgttccgtcatggcatgacgcggctttatgctg +ccctccatctc-ccgcccgaggttctactgcctcccggcacataccgtaccacgtcgtatttactgattcat +gacggtaggcgtgttgtggtgacgtacgagggcgataccagtgctggttataatcatgatgtttctaatcta +cgttcctggattaggaccactaaggtcaccggggaccatcctctcgttatcgagcgggttagggccatcggc +tgccattttgttctcctgctcacggccgccccggaaccatcccctatgccttatgtgccttacccccggtcc +accgaggtctatgtccgatcaatctttggcccgggt---------ggaaccccctcattgtttccaacctcg +t----------gctccactaagtcaa-ccttccatgctgtccctgtccatatctgggaccgtcttatgttgt +tcggggccactttggacgaccaggccttttgctgttcccgtcttatgacttacctccgtggcattagctaca +aggttactgtcggcacccttgtggccaatgagggctggaacgcctccgaggacgccctcacagctgtcatta +ctgccgcctacctaaccatatgccaccagcggtatcttcgcacccaggctatatctaaggggatgcgtcgtt +tggagcgggagcatgcccagaagtttataacacgcctttatagctggctctttgagaagtc---------cg +gccgtgactacatccccggccgtcagctggagttttatgcccagtgtaggcgttggctctcagccggcttcc +atcttgacccacgggtgttggtttttgacgagtcggtcccctgc---cactgtaggaccacgatccgcag-- +----ggttgcttcaaagttctgttgcttcatgaagtggctcggccagga------gtgcacctgtttcctac +----------------agcccgcagagggtgttgttggcgaccagggc--------catgacaacgaggctt +atgagggctctgatgttgaccctgccgaatctgccacctgtgacatatctgggtcctacgtggtgcctggtg +ctgccctccagccgctctaccaggctcttgatctccctgccgatattgtggcccgtgcaggtcggctgaccg +ccacagtaaaggtttctcaggctgaggggcggattgactgcgagacctatcttggtaataaaactttccgca +cgtcgttcgtcgacggagcggttttagagactaatggccc------------------------agagcgcc +tcaatctctcctttgacgccagtcagagcactatggccgccggcctctttagtcttacctacaccacttctg +cagctgggctggaggtgcattatgtcgct-------gccgggcttgaccatcgggcggtttttgcc---ccg +ggtgtctcaccccggtcggcccctggcgaggttaccgccttctgctccgccctatataggttcaaccgtgag +gcccagcgccactcactgaccggcaacttttggtttcatcccgaggggctccttggccccttcgttcctttc +tctcccgggcatgtttgggagtcggctaacccgttttgtggtgagagcacactctacacccgtacctggtcg +gaagttgatgccgcttctaacccggcccagcccgacctaggccttgcatctgagcctcccatacccagtagg +gccgccac----------------------------gcctat-----------cttggcggc---------- +---------ccctctgccc----tccattgtac--------------cgggccccaccccccccccctccgc +cctgg------------------------------------------------------------------- +-------------------------------------------------------------tgc-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctagtgagccggcc------tctggt +gccagcgc-----------------cgg------------------------ggctctggccataacccacc +aga----------------------------------------------cggtccgacaccgccgtt----- +-------------------tgcttttcacctacccggatggttccaaggtgtttgccggctcgctgttcgag +tcagcgtgtacgtggcttgttaacgcgtctaatgttgaccaccgccctggtggcgggctctgccatgcattc +taccaaaggtatcccgcttcct------ttgacgctgcctcttttgtgatgcgcgatgg---cgcggccgcg +tacacattaactccccggccgataattcatgccgtcgcccctgactataggttggaacataacccaaagagg +ctcgaggccgcttaccgggagacctgctctcgccttggtaccgctgcatacccgctcctcgggactggcata +tatcaggtaccaatcggcccgagttttgacgcctgggagcggaaccaccgccctggggacgagttgtatctt +cctgagcttgccgccaaa-------------------------------------------------tggtt +cgaggccaataagcctacccg--------------------------------------------------- +------------------------------------------cccgactcttactataactgaggatgtcgc +ac------------ggacggcaaacttggccatcgaacttg------------actcggccacagacgtcgg +ccgggcctgc---gccggctgccgagtcacccccggtattgtgcagtatcagtttaccgcaggtgtgcccgg +gtctggaaagtcccgttctgttatccagactgacgtggacgttgttgtggttccgactcgggagctgcgtaa +cgcctggcgccgccgcggttttgctgcttttaccccgcatactgccgctagggtcacccaggggcgtcgtgt +cgtcatcgatgaagccccgtctctccccccgcacctgttgctgctccacatgcagcgggccgccaccgtcca +ccttcttggcgacccgaatcagatcccagccatcgattttgagcacgccgggctcgtccccgccatcaggcc +cgatttagcccctacttcctggtggcatgtcactcaccgctgtcccgcggatgtgtgtgagctgattcgcgg +tgcatatcctatgatccagcccactagccgggtccttcgttcgttgttttggggtgag------cctgccgt +tgggcagaaactagtgttcacccaggcggctaaggctgccaaccccggctcagtgacggtccacgaggcaca +gggcgctacctacacagagaccaccattattgcaacggcagacgcccgtggccttattcagtcgtcccgggc +tcatgccattgtcgccctgacgcgccacacagagaagtgcgtcatcattgacgcaccaggcttgcttcgtga +ggtgggcatctctgacgcaattgtcaataatttc------------------------------ttcctcgc +tggcg--gtgaggttggtcaccagcgtccgtctgttatccctcgcggcaaccccgacgccaatgtcgacac- +-----cctggctgcctttccaccgtcatgccagattagtgctttccaccaattggccgaggagcttggtcac +agacccgcccctgttgcggctgttctaccaccctgccctgagctcgaacagggccttctctacctgccccag +gagctcaccacctgtgatagtgttgtaacatttgagttgacagatattgtgcattgccgcatggccgccccg +agccagcgcaaggccgtgctgtccacacttgtgggtcgatacggtcggcgtacaaagctttataatgcctcc +cattctgatgtccgcgactctctcgcccgtttcatcccgaccattggccccgtgcaggttacaacttgtgag +ctgtacgagttagtggaagccatggttgagaagggccaggatggctccgccgtccttgagctcgacctttgc +aaccgtgacgtgtccaggattacctttttccagaaagactgtaataagtttaccaccggggagaccattgcc +catggtaaagtgggtcagggcatctcggcttggagtaagactttctgtgccctcttcggcccctggttccgt +gctattgagaaggccatcctagctctgctcccccagggtgtgttctatggggatgcttttgatgacaccgtc +ttctctgcggctgtggccgctgcgaaggcttccatg---gtgtttgagaatgacttctctgagtttgactct +actcagaataatttctcctt------------------gggacttgagtgtgctattatggaggagtgcgga +atgccgcagtggctcatccgcctttaccaccttataaggtctgcatggatcctgcaggccccgaaggagtcc +ctgcgggggttctggaagaagcactccggtgagcccggcactctcctatggaataccgtctggaacatggct +gttattacccactgttatgacttccgggatctgcaagtggctgcttttaaaggtgatgattcaatagtgctt +tgcagtgagtaccgtcagagtccaggagccgcagtcctaattgctggctgcggcctgaagttgaaggtggat +ttccgcccgattggcttatatgcaggtgttgtggtggcccccggccttggtgcactccctgacgttgtgcgt +tttgccggccggctcactgagaagaattggggccccggccctgagcgagcggagcagctccgcctcgctgtg +tgtgatttccttcgcaagctcacgaatgtggctcagatgtgtgtggatgttgcttctcgtg-------ttta +tggggtctccccagggctagttcataacctgattggtatgctacaggctgttgccgacggcaaggcccattt +cactgagtcggtaaagccagtgcttgacctgacgaattcaatcttgtgtcgggtggaatgaataacatgtc- +t----------------tttgctgcgcccatgggt---------tcgcgaccatgcgccctcggcctatttt +gttgctgttcctcatgtttctgcctatgttgcccgcgc---------------------------------- +-caccgt------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggttc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----caatcccctatattcat---- +--------------ccaaccaaccccttcgcccccgatgtcaccgctgcggccggggctggacctcgtgttc +gccaacccgcccg---------------accactcggctccgcttggcgtgaccaggccca----------- +------gcgccccgccgctgcctcacgtcgtagacctaccaca---------gctggggccgcgccgctgac +tgcggttgctccggcccatgataccccgcctgtgcccgatgttgattctcgcggcgctatcttgcgccggca +gtataatctttcaacatcccctcttacctcctccgtggccactggcaccaatttggtcctttatgctgcccc +tcttagcccgcttttgccccttcaggacggcaccaatactcatataatggccacggaggcttccaattatgc +ccagtaccgagttgcccgcgccacaatccgctaccgccctctggttcccaatgctgttggtggctatgctat +ctctatatcgttctggccgcagaccactaccaccccgacgtccgtcgacatgaattctataacctcgacgga +tgttcgtattctcgtccagcccggtattgcctcagagcttgtgattccaagtgaacgcctgcattatcgcaa +ccagggttggcgctctgttgaaacctccggggtggcggaggaggaggccacctctggccttgtcatgctttg +tatacatggctcacctgtgaactcttatactaacacaccttacactggtgccctcgggttgttggattttgc +tctcgagcttgagttccgcaacctcacccctggtaacaccaatacacgggtttcccgctactctagcaccgc +ccgccaccgtcttcgccgtggcgcagacgggactgccgagctcaccaccacggctgcgactcgctttatgaa +ggatctctattttt---ctagcactaat---ggtgttggcgagatcggccgcgggatagcccttaccctgtt +taatcttgctgacaccctgcttggcggcctaccgacagaattgatttcgtcggctggtggccaactgtttta +ctctcgcccggtcgtctcagccaatggcgagccgactgtcaagctgtatacatctgtagagaatgctcagca +ggataagggtattgcaatccctcacgacatcgaccttggggaatctcgtgtagtcatccaggattatgacaa +tcagcatgagcaggaccgtccgacaccttccccagccccgtctcgccctttttctgttctccgggccaatga +tgtgctttggctctc-----------------------------tctcactgctgctgagtatgat------ +cagtccacctatggctcttctactggcccagtctatgtctccgactctgtgaccttggt---caatgttgcg +accggcgcgcaggccgttgctcggtcgcttgactggactaaggtcacacttgatggccgccctctttctact +at-----ccagcagtattcgaagactttctttgtcc-tgccgcttcgtggtaaactttccttctgggaggca +ggtaccactaaa--gccgggtacccttacaattataatactactgctagtgaccaactgctcgttgagaatg +ccgccgggcac------cgggtggctat-ttccacctacaccactagcttggg--------------tgctg +gccctgtctccatttc-tgcggtggctgtcctggccccccactctgcgttagcactgcttgaggataccctg +gatt---------accctgctcgcg----cccatacttttgatgatttctgcccagagtgccgccccc---t +cggcctccagggctgcgcctttcagtc--------cactgtcgctgagctccagcggct------------- +--------taagatgaaggtgggtaaaactcgggagttatagttta-ttt------gctt----------gt +gccctcct--------tc------tttctg------tt-----------------gcttatt-t-------c +tcttttct----gcg----------------tttcgcgctccctg---------------------aaaaaa +aaaaaaa---------------aaaaaaa------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>AF455784.1/17239/1-7239 |Hepatitis E virus strain Osh 205, complete genome +-------------------------taggcagacca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcatcactaccgccatcgag---caagctgctctggc +tgcggccaactctgccctggcgaatgctgtggtagttcggccgttcttatcacgtgttcagactgaaatcct +tatcaatttgatgcaaccccggcagctggtattccgccctgaggttttgtggaaccacccaatccagcgtgt +tatccataatgagctagaacaata---ctgccgggccc-gtgccgggcgttgcttggaggtgggagcccacc +cgaggtctattaatgacaaccctaatgtcctgcaccggtgcttcctccgccctgttggaagggacgttcagc +gctggtattctgcccccacccgcggtccggcggctaactgccgccgttccgcactgcgtggtttgcctcccg +ttgatcggacctattgtttcgacgggttttctcgctgcgcttttgcagctgagaccggaatagctctgtatt +cactgcacgacctctggccggctgatgttgcggaggctatggcccgccatgggatgacgcgcttgtatgccg +cactccacttg-ccccctgaggtcctgttaccacctggcacctaccatacgacctcataccttttgattcat +gatggtgatcgtgcagtcgtaacatatgagggcgacactagtgcagggtataaccatgatgtgtctatactc +cgcgcatggatccgcacaactaagatagttggtgaccatccgctggtgatagagcgggtccgcgccattggc +tgccactttgttttgcttcttactgcagcccctgaaccatctcctatgccctatgtcccttacccccgctcg +acggaggtgtacgtccgctcgatattcggccctggg---------ggctcgccatccctcttcccatcagct +t----------gctccacaaagtcaa-cctttcatgccgtcccggtgcacatctgggaccggcttatgcttt +ttggcgccactttggatgatcaggccttttgttgctcgcggcttatgacctatctccgcgggattagttata +aggtcactgttggtgcacttgttgctaatgagggttggaacgcctcggaggatgcgcttacagctgttatta +ctgcggcgtatttgaccatttgtcatcagcgatatcttcggacccaggcaatatccaagggcatgcgtcggc +tagaggtagaacatgcccagaagttyattacaaggctgtatagctggctgtttgagaaatc---------cg +gccgtgattatatccccggccgtcagctccaattttatgcacagtgtcgycgctggctttcggccggttttc +acctggaccctagggtgctcgtctttgatgagtcggtcccctgc---cgctgcaggagcttcctaaagaa-- +----ggctgccggtaagatctgctgttttatgaagtggttgggccagga------gtgcacctgtttcctag +----------------aaccggctgaaggtctggttggtgactgtggc--------cacgataacgaggcct +tcgaggggtctgaggtggatcccgctgagccagcccaccttgacgtttccgggacctatgcagtccacgggc +gccaacttgaggccctttacagagcacttaacatcccgcaagacatcgcagctcgcgcatctcgtctgacgg +ccactgtggagcttgctgccagcccaggccgccttgagtgccgcacagtgcttgggaacaagacgttccgta +cgactgtagttgatggcgcccatcttgaagccaacggccc------------------------ggagcagt +atgtcttaacatttgatgattctygtcagtccatgggtgctgggccccatagtcttacttacgagctcaccc +ccgccggtctacaggttaggatatcttca-------aacggcttggactgtactgcagtctttccc---cct +ggcggagcccctagtgctgagccgggggaggtggcggctttttgcagtgctctatataggtacaacaggttc +acccagcgccattcgctaactggtgggctgtggttgcaccccgaggggctgctaggtttgttccctccattt +tcccctggacacctctgggagtctgcgaatcccttctgtggtgagggaacgttatatactcgaacctggtct +acatctggcttttctagtgacttttcccccccggaagcggc---------------cgctaacgg----tga +accgcccccgggtgccccctc---caccagcggcat-----------------ctgggtgct---------- +---------cccgccgcct----tctgagggat--------------cggaggttg---cactacccacaac +tccgg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tgcgtaagcctgtcgatctgccggtc +tccatccctcccgag-------------------------------------gcccccgcccgtaagccgcc +cgccccccc--------------------------------------gccggctcgtactcgccggc----- +-------------------ttctctacacttacccggacggggctaaggtgtatgcagggtccctttttgag +tctgactgtgattggctggtcaacgcgtccaatcccggccatcgtcccggcggcggcctctgtcatgctttc +taccagcggttcccggaatcgt------tctacccggccgatttcatcatgcgcgatgg---cctcgctgcg +tacaccctgaccccccgcccgattatacatgctgtggcccctgattaccgggttgaacagaatcctaagagg +ttggaggctgcataccgtgagacttgctcccggcgtggcactgctgcttacccattgttaggttcggggatc +tatcaagtccctgtgggtttgagctttgatgcttgggagcgtaaccaccgccccggggatgagctttaccta +accgaacccgctgccgcc-------------------------------------------------tggtt +cgaagccaataaaccggccca--------------------------------------------------- +------------------------------------------gccggccctcacgataactgaggacatcgc +cc------------gcacggctaatctcgcgcttgagatcg------------actccgccaccgaggtggg +tcgggcctgt---gccggctgcactgttagccctgggattgtccattatcagttcactgccggggttcccgg +ttccgggaagtccaggtctatccagcagggggatgttgatgttgtggtcgtgcctacccgtgaactccgtaa +cagctggaggcgccgtggttttgcagccttcacgccgcatacggcagcccgtgtcaccgggggtcggcgagt +tgtaatcgatgaagcgccctcgctaccaccgcacctcctattactccatatgcagcgagcctcatcggttca +tcttcttggcgacccgaatcagatccctgcgattgactttgaacacgctggcctagtccccgcaatccgtcc +cgagcttgcccccactagttggtggcatgtcacacaccgttgccccgccgatgtgtgtgagctcatacgcgg +ggcttaccctaaaattcaaaccactagccgtgtgctgcggtccttattttggaatgag------cctgcaat +agggcaaaagttggtctttacgcaggcggctaaggccgccaaccctggtgcaattactgtccacgaggccca +gggtgccacatttacagagaccacaatcatagctacagccgatgcccggggcctcatccagtcctcccgagc +ccacgctatagttgcattgacccgccacacagagaaatgtgttatcctggacgcccctggtctgctgcgtga +ggtcggyatttcagacatcattgtaaataatttc------------------------------tttctggc +cggcg--gcgaggtgggccatcaccgcccctctaccataccccgcggtaacccggaccggaacttggacac- +-----cttgcaggctttccctccatcttgtcaaattagcgcttaccatcagttggctgaagagttgggccac +cggccagccccagtcgccgctgttttgcccccttgccctgagctcgaacaaggcctgctttacatgccgcag +gagctcgctgtatccgacagtgtcctagtgtttgagctcacggatatagttcattgccggatggctgcccca +agccaacggaaagccgtcctctcgacattggtgggcaggtatggccgtcggacaaagttgtatgaggcggcc +cactctgacgtccgtgagtccttggcaaagtttattcccactattggcccagtccaggccaccacatgtgag +ctatgtgagctggtcgaggctatggtggagaagggccaggatggttctgccgtcctggagcttgacctctgc +agtcgcgatgtctcccgcatcacatttttccaaaaggattgtaataagtttacaaccggtgagaccattgcc +cacggtaaggtgggccagggaatctcggcttggagcaagaccttttgtgccctattcggaccttggttccgt +gctattgaaaaagagatcttagccctgctcccgcctaacattttctacggcgacgcttacgaagagtcggtc +ttctctgccgccgtttctggagctggcactagtatg---gtctttgagaatgacttttctgaatttgatagc +actcagaataatttctccct------------------tggtctcgagtgtgttattatggaggagtgtggc +atgccgcagtggcttgtccggctatatcacctagtccggtcggcctggaccctacaggccccgaaggagtct +ctgaaaggtttctggaagaagcactccggcgagcctggcacgcttctctggaatactgtctggaacatggca +attatagctcattgctatgagttccgcgactttaaggtcgctgcgtttaaaggggatgattcagtggttctg +tgcagtgactaccgccagagtcgtaatgcggctgccctgattgctggctgtgggttgaagttgaaagttgat +taccgccctattgggctgtatgctggcgtggtgattgccccaggtttgggagctctacctgatgtggttagg +tttgccggtcggctgtctgagaagaactggggtcccggccccgagcgagctgagcagctgcgcctggctgtt +tgtgactttcttcgagggttaacgaatgttgcgcaggtttgtgttgatgtggtgtcccgtg-------ttta +tgaggtcagccccgggttagtacataaccttattggcatgctgcagaccattgcagacggcaaggcccactt +tactgagactgttaaaccggtactggatcttacgaactccattatacagaggctagaatgaataacatgtc- +t----------------tgtgcatcgcccatggg------------atcgccatgtgccctcgggctgtttt +gctgttgttcctcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgttgtgggcg-gcgcagcggcggtac +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaacccctttgccgccgacgtcatttcacaacccggggctggagctcgccctc +gacaggcgccccg---------------ccccctcggctcctcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctacccca---------gctggggctgcgccgttgac +tgctgtgtcacctgcacctgacacagccccagtccccgatgttgattcgcgcggcgctatcttgcgccgcca +gtataatctgtccacctcccctttaacytcctctgtggcttcaggtacaaatcttgttctgtatgccgctcc +actcaatccccttctacccctccaggacggcactaacacccatattatggcaaccgaggcgtctaattacgc +ccagtatcgggttgttcgggcaacgatccgttatcgcccgctggtgccgaatgctgttggtggttatgcaat +ttccatctcyttttggcctcagaccacaaccaccccgacctctgtggatatgaattctatcacctctactga +tgtcagaatattggtccaacctggcatagcytctgagttggttatcccgagcgaacggcttcattaccgcaa +tcarggctggcgctctgtggagacctcgggtgtggccgaagaggaggctacttccggtctggttatgctttg +cattcatggctctcctgttaactcctatactaatacgccctataccggggcattggggcttcttgattttgc +acttgagcttgagtttaggaacttgacccccgggaacactaacacccgtgtgtcccgctatactagtacagc +tcgccaccgcctacgccgaggtgcggacgggactgctgagcttacaactactgctgccacacgtttcatgaa +ggacctgcatttta---ctggaacaaat---ggcgtcggcgaggttggccgcggtattgccttgaccttatt +taatcttgctgacacacttcttggcggtctgccgacagaattgatttcgtcggctgggggtcaattgtttta +ctcccgtcctgtcgtctcagccaatggcgagccgactgttaaactgtacacctccgtcgagaatgcacagca +ggataagggtattgccataccgcatgatatagacttaggggactctcgtgtggttatccaggactatgacaa +tcaacatgagcaggatagacccactccatcacctgccccgtctcgccctttttcggttctccgtgctaatga +tgttttgtggctttc-----------------------------actcaccgccgctgagtacgat------ +cagactacttacggctcgtcaaccaaccccatgtatgtttcagacactgttacttttgt---caatgtggcc +acgggtgctcaggccgtggcccgctcactggactggtctaaggtcaccttggacggccggccccttactact +at-----ccagcaatattctaagacattttatgtac-tcccgctccgcgggaagttgtctttttgggaggct +ggtactactaag--gctggttacccctataactataacaccactgctagtgatcagatcctgattgaaaatg +cggcgggtcac------cgtgttgcaat-ttctacttacaccactagtcttgg--------------tgctg +ggcctgtgtctgtgtc-cgcggttggtgtgcttgctccacactctgctctagctgcgcttgaagatactatt +gatt---------accccgcccgtg----ctcatacctttgatgatttctgccccgagtgccgtaatc---t +tggcttgcagggctgtgctttccaatc--------tactattgctgagcttcagcgtct------------- +--------taaaatgaaggtaggcaaaacccgggagtcttaattag-ttt---cc-ttct----------gt +gccc-cctt-------cc-tttg-tt-tt----gt-tt-aattyct------------aatt-y-------c +tttttycg----ggg----------------ttycgcgcccccgg---------------------gaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------aa---------------------------- +------------------------------------------------------------------------ +----------- +>AX181807.1/17202/1-7202 |Sequence 89 from Patent WO0146696 +------------------------------------------------------------------------ +-------------------------------cctggcattactactgccattgag---caggctgctctggc +tgcggccaattctgccttggcgaatgctgtggtggttcggccgtttttatctcgcgtgcaaaccgagattct +tattaatttgatgcaaccccggcagttggttttccgccctgaggtactttggaatcaccctatccagcgggt +tatacataatgaattagaacagta---ctgccgggctc-gggctggtcgttgcttggaggttggagctcacc +caagatccattaatgacaaccccaacgttctgcatcggtgtttccttagaccggttggccgagatgttcagc +gctggtactctgcccccacccgcggccctgcggctaattgccgccgctccgcgttgcgtggtctcccccccg +ctgaccgcacttactgctttgatggattctcccgttgtgcttttgctgcagagaccggtgtggctctttact +ctctgcatgacctttggccagctgatgttgcagaggctatggcccgccacgggatracacgcttgtatgccg +cactgcacctt-ccccctgaggtgctgctaccacccggcacctaccacacaacctcgtatctcctgattcac +gacggcgaccgcgctgttgtaacttacgagggcgatactagtgcgggctataatcatgatgtctccatactt +cgtgcgtggatccgtactacaaaaatagttggtgatcatccgttggtcatagagcgtgtgcgggccattgga +tgtcattttgtgttgctgctcaccgcagcccctgagccgtcacccatgccttatgttccttaccctcgttca +acggaggtgtatgtccggtccatatttggccctggc---------ggctccccatccttgtttccgtcagcc +t----------gctctactaaatcta-ctttccatgctgtcccggtgcatatctgggatcggctcatgctct +ttggtgccaccctggacgatcaggcgttttgctgttcacggctcatgacttacctccgtggtattagttaca +aggtcactgtcggcgcgcttgtcgctaatgaggggtggaacgcctctgaagacgctcttactgcartgatca +ctgcagcttatttgactatttgccatcagcgttatctccgcacccaggcgatatccaagggcatgcgccggt +tgggggttgagcacgcccagaaatttatcacaagactctacagttggctatttgagaagtc---------tg +gccgtgattatatccccggccgccagcttcagttctatgcacagtgccgacggtggctatctgcaggcttcc +acctagaccccagggtacttgtttttgatgagtcagtaccatgc---cgctgtaggacgtttttgaagaa-- +----agttgcgggtaaattctgctgttttatgcggtggctcgggcagga------gtgtacctgcttcttgg +----------------agccggccgagggtttagtcggcgatcatggc--------catgacaacgaggcct +atgagggttctgaggtcgacccggctgaacctgcacatcttgatgtttctgggacttacgccgtccacgggc +accagcttgaggccctctatagggcacttaatgtcccacaagatattgccgctcgagcttcccgactaacgg +caactgttgagctcgttgcaagtccagaccgcttagagtgccgcaccgtgctcggtaataagaccttccgga +cgacggtggtcgacggcgcccatctagaggcgaatggccc------------------------tgagcagt +atgtcttatcatttgacgcctcccgtcagtctatgggggccgggtcgcatagcctcacttatgagctcaccc +ctgctggtttgcaggttaggatttcatct-------aatggtctggattgcactgctacattcccc---ccc +ggtggagcccctagcgctgcgcccggggaggtggcagccttttgcagtgccctttatagatataacaggttc +acccagcggcactcgctgactggcggattatggttacaccctgaggggttgctgggtattttcccccctttc +tcccctgggcatatctgggagtctgcgaaccccttttgcggggaggggactttgtatacccgaacttggtca +acatctggcttttctagtgatttctccccccctgaagcggccgctcctgctatggctgctacccc----ggg +gctgcccc---attctaccccacctgttagcgatat-----------------ttgggtgct---------- +---------accaccgccc----tcagaggagt--------------ttcaggttgatgcagcacctgtgcc +ccctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------cccctgaccctgctggattgcccggt +cccgttgtgctta-------------------------ccccccccccccctccccctgtgcataagccatc +aataccccc--------------------------------------gccttcccgtaaccgtcgtc----- +-------------------tcctctatacctatcctgacggcgctaaggtgtatgcagggtcactgtttgaa +tcagactgtgactggctggttaatgcctcaaacccgggccatcgtcccggaggtggcctctgccatgccttt +taccaacgttttccagaagcgt------tttacccaactgaattcatcatgcgtgaggg---tcttgcagca +tacaccttgaccccgcgccctatcattcatgcagtcgctcccgattatagggttgagcagaacccgaagagg +cttgaggcagcgtaccgtgaaacttgttcccgtcgtggcaccgctgcctacccgcttttgggttcgggtata +taccaggtccctgttagcctcagttttgatgcctgggaacgtaatcaccgccccggcgatgagctttacttg +accgagcccgctgcaaat-------------------------------------------------tggtt +tgaggctaataagccggcgca--------------------------------------------------- +------------------------------------------gccggtgctcaccataactgaggacacggc +cc------------gtacggccaacctggcattggagattg------------atgccgctacagaggtcgg +ccgtgcttgt---gccggttgcaccatcagccctggcattgtgcactatcagtttaccgccggggtcccggg +ctcgggcaagtcaaggtccatacaacagggagatgtcgatgtggtggttgtgcccacccgggagcttcgtaa +tagttggcgccgccggggttttgcggccttcacaccccacacagcggcccgtgttactatcggccgccgcgt +tgtgattgatgaggctccatctctcccgccacacctgttgctgttacatatgcagcgggcctcctcggtcca +tctcctcggtgacccaaatcagatccctgctattgattttgagcacgccggcctggtccctgcgatccgtcc +cgagcttgcgccaacgagctggtggcrcgttacacaccgttgcccggccgatgtgtgcgagctcatacgcgg +agcctaccctaaaatccagaccacgagccgtgtgctacggtccctgttttggaatgaa------ccggccat +tggccagaagttggttytcacgcaggcggcaaaggctgctaaccctggtgcgattacggtccacgaagctca +gggtgccaccttcacagagaccacaatcatagccacggccgacgccaggggccttatccagtcatcccgggc +tcatgctatagttgcacttactcgccacactgagaagtgtgttatcctggatgcccccggcctgcttcgtga +ggtcggcatttcggatgtgattgtcaacaacttt------------------------------ttccttgc +tggtg--gcgaggtcggccrccaccgcccttctgtgatacctcgcggtaaccctgatcaaaacctcgggac- +-----tttacaggccttcccgccgtcctgtcaaattagtgcttaccatcagttggctgaggaactgggccat +cgcccggcccctgtcgccgccgtcttgcccccttgccctgagcttgagcagggcctgctctacatgccacag +gagctcactgtgtccgatagtgtgttggtttttgagcttacggatatagttcattgccgcatggccgctcca +agccagcgaaaggctgttctctcaacacttgtggggaggtatggccgtaggacgaaactatatgaggcggcg +cattcagatgttcgtgagtccctagctaggttcatccctactatcgggcctgttcaggctaccacatgtgag +ttgtatgagttggttgaggctatggtggagaaaggtcaggacggctctgcagtcttagagcttgatctttgt +aatcgtgatgtctcgcgcatcacatttttccaaaaagwctgcaacaagtttacaactggtgagaccatcgcc +cacggcaaggttggccagggtatatcggcctggagtaagaccttctgcgctctgttcggcccgtggttccgc +gccattgaaaaagaaatattggccctgctcccgcctaatatcttttatggcgacgcttatgaggagtcagtt +tttgccgccgctgtgtccggggcggggtcatgtatg---gtatttgaaaatgacttttcagagtttgacagt +acccagaataatttctctct------------------tggccttgagtgtgtggttatggaggagtgcggc +atgcctcaatggctaattaggttgtaccatctggttcggtctgcctggattctgcaggcgccgaaggagtct +cttaagggtttctggaagaagcattctggtgagcctggtacccttctttggaataccgtctggaatatggcg +attatagcacattgctatgagttccgtgactttcgtgttgctgcctttaagggtgatgattcggtggtcctc +tgtagtgactaccgacagagccgcaatgcagctgccttaattgctggctgtgggctcaaattgaaggttgat +taccgccctatcgggctgtatgctggggtggtggtggcccccggtttggggacactgcccgatgtggtgcgt +tttgctggtcggttgtctgaaaagaattggggccccggcccggaacgtgctgagcagctgcgtcttgctgtc +tgcgacttccttcgagggttgacgaatgttgcgcaggtctgtgttgatgttgtgtcccgtg-------tcta +tggagtcagccccgggctcgtacataaccttattggcatgctgcagaccatcgccgatggcaaggcccactt +tacagagactattaaacctgtacttgatctcacaaattccatcatacagcgggtggaatgaataacatgtc- +t----------------tttgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gttgttgttcctcatgtttctgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggtcagccgtctggcc------------gtcgccgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggagtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgccgatgtcgtttcacaacccggggctggaactcgccctc +gacagccgccccg---------------ccccctcggttccgcttggcgtgaccagtccaa----------- +------gcgcccctccgttgccccccgtcgtcgatctacccca---------gctggggctgcgccgctaac +tgccatatcaccagcccctgatacagctcctgtacctgatgttgactcacgtggtgctattttgcgccggca +gtacaatttgtctacgtccccgcttacatcatctgttgcttctggtactaatctggttctctatgctgcccc +gctgaaccctctcttgcctcttcaggatggcaccaacactcatattatggctactgaggcatctaattacgc +ccagtatcgggttgttcgggctacgattcgttatcgcccgttggtgccaaatgctgttggtggttatgctat +ctctatttctttctggcctcaaactacaactacccctacttctgttgacatgaattctatcacttctactga +tgtcaggatcttggtccagcccggtatagcctccgagttagtcatccctagtgaacgccttcactaccgcaa +ccaaggctggcgctctgttgagaccacgggtgtggccgaagaggaggctacctccggtctggtaatgctttg +tattcatggctcccctgttaactcctacactaatacaccttacaccggtgcattggggcttcttgattttgc +attagaacttgaatttagaaatttgacacccgggaacactaacacccgtgtttcccggtatactagcacagc +ccgccaccggctgcgccgcggtgctgatgggaccgctgagctcaccaccacagcagccacacgcttcatgaa +ggatttgcatttta---ctggtacgaac---ggcgttggtgaggtgggtcgtggtattgccctgactctgtt +taatcttgctgatacgcttcttggtggtttaccgacagaattgatttcgtcggctgggggtcaactgtttta +ctcccgccctgttgtctcggccaatggcgagccaacagtaaagttatacacatctgttgagaatgcgcagca +agacaagggcatcaccattccacacgacatagatttaggtgactcccgtgtggttatccaggattatgataa +ccagcacgaacaagatcgacctaccccgtcacctgccccctcccgccctttctcagttcttcgtgccaatga +tgttttgtggctctc-----------------------------tctcactgccgctgagtacgrc------ +cagaccacgtatgggtcgtccaccaaccctatgtatgtctctgatacagtcacgcttgt---taatgtagcc +actggtgctcaggctgttgcccgctctcttgactggtctaaagttactctggatggtcgccctcttactacc +at-----tcagcagtattctaagaaattttatgttc-tcccgcttcgsgggaagctgtccttttgggaggct +ggtacgaccaag--gccggctacccgtataattataataccactgctagtgaccaaattttgattgagaacg +cggccggtcac------cgtgtcgccat-ttctacttataccactagtttggg--------------tgccg +gccctacctcgatytc-tgcggtcggtgtactagctccacattcggcccttgctgttctcgaggatactgtt +gatt---------atcctgctcgtg----cccatacttttgatgatttctgcccggagtgtcgcaccc---t +tggtctgcagggttgtgcattccaatc--------tactattgctgaacttcagcgtct------------- +--------taaaatgaaggtaggtaaaacccgggagtcttaattaa-tt----c--c--t-ttt------gt +gccc-cct--------tc-gcag-ttctctttggc-tt--------------------tatt-t-------c +tcatttct----gc----------------tttccgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaa---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>AF185822.1/17143/1-7143 |Hepatitis E virus nonstructural polyprotein gene, partial cds; structural protein gene, complete cds; and unknown gene +------------------------------------------------------------------------ +----------------------------gctcctggcatcactactgctattgag---caggctgctctagc +agcggccaactctgccctggcgaatgctgtggtagttcggccttttctctctcaccagcagattgagatcct +cattaacctaatgcaaccccgccagcttgttttccgccccgaggttttctggaatcatcccatccagcgtgt +catccataacgagctggagcttta---ctgtcgcgctc-gctccggccgctgtcttgaaattggtgcccatc +cccgctcaataaatgataatcctaatgtggtccaccgctgcttcctccgtcctgtcgggcgtgatgtccagc +gctggtatactgctcccactcgcgggccggccgctaattgccggcgttccgcgctgcgcgggcttcccgctg +ctgaccgcacttactgcttcgacgggttttctggttgtagcttccccgccgagacgggcatcgccctctact +ccctccatgatatgtcaccatctgatgtcgccgaggccatgttccgccatggcatgacgcggctttatgctg +ccctccacctt-ccgcctgaggtcttgctgccccctggcacatatcgcaccgcttcgtatctgctgattcat +gacggcaggcgcgttgtggtgacgtatgagggtgatactagcgctggttataaccacgatgtctccaacctg +cgctcctggattagaaccaccaaggtcactggggaccaccccctcgttatcgagcgggtcagggccattggc +tgccactttgttctcttgctcacggcagccccggagccatcacctatgccttatgtcccttacccccggtcc +accgaggtctatgtccgatcgatcttcggcccgggt---------ggtaccccctctttattcccaacctca +t----------gctccactaagtcga-ccttccatgctgtccctgcccatatctgggaccgtcttatgttgt +tcggggccaccttggacgaccaagccttttgctgctcccgcttaatgacctaccttcgcggcattagctaca +aggtcactgttggtacccttgtggccaatgagggctggaatgcctctgaggacgccctcacagctgtcatca +ctgccgcctaccttaccatttgccaccagcggtacctccgcacccaggctatatccaaggggatgcgtcgtc +tggaacgggagcacgcccagaagtttataacacgtctctacagctggctcttcgagaagtc---------cg +gccgtgattacatccccggccgtcagttggagttctacgcccagtgtaggcgctggctctcggccggctttc +atcttgacccacgggtgttggtttttgacgagtcggccccctgc---cactgtaggaccgcgattcgtaa-- +----ggcgctctcaaagttttgctgctttatgaagtggcttggtcagga------gtgcacctgtttccttc +----------------agcccgcagaaggcgtcgtcggcgaccagggt--------catgataacgaagcct +atgaggggtccgatgttgaccctgctgaatccgccattagtgacatatctgggtcctatgtcgtccctggcg +ctgccctccaaccgctctaccaggccctcgatctccccgctgagattgtggctcgcgcgggccggctgaccg +ccacagtaaaggtctcccaggtcgatgggcggatcgattgcgagaccctccttggtaacaaaaccttccgca +cgtcgttcgttgacggcgcggtcctagagaccaacggccc------------------------agaacgcc +ataatctctccttcgatgccagtcagagcactatggccgctggccctttcagtctcacctacgccgcctctg +cagctgggctggaggtgcgctatgttgct-------gccgggcttgaccatcgggcggtttttgcc---ccc +ggtgtttcaccccggtcagcccccggcgaggttactgccttctgctctgccctatacaggttcaaccgtgag +gcccagcgccattcgctaaccggtaacctatggttccaccctgaggggcttattggcctcttcgccccgttt +tcgcccgggcatgtttgggagtcggctaatccattctgtggcgagagtacactttacacccgtacttggtcg +gaggttgatgccgtctctagtccagcccggcccgacttaggttttatgtctgagccctctatatctagtagg +gccgccac----------------------------gcccac-----------cctggcggc---------- +---------ccctctacct----tcccctgcac--------------cggacctttctacccctccctctgc +cccgg------------------------------------------------------------------- +-------------------------------------------------------------cgc-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ctgatgagccggcc------tctggc +gctaccgc-----------------cgg------------------------ggccccggccataacccacc +agg----------------------------------------------cggcccggcaccgccgcc----- +-------------------tgctctttacctacccggatggctctaaggtattcgccggctcgctgttcgag +tcgacatgtacgtggctcgttaacgcgtctaatgctgaccaccgccctggtggcgggctttgccatgcattt +taccaaaggtaccccgcctctt------ttgatgctgcctctttcgtgatgcgcgacgg---cgcggccgcg +tacacactaaccccccggccaataatccacgctgtcgcccctgattataggttggaacataacccaaagagg +cttgaggctgcttatcgggagacttgttcccgcctcggtaccgctgcatacccgctcctcgggaccggcata +taccaggtgccgatcggccccagttttgacgcctgggagcggaaccaccgccccggggatgagttgtacctc +cctgagcttgctgccaga-------------------------------------------------tggtt +tgaggccaataggccgacccg--------------------------------------------------- +------------------------------------------cccagctctcactataactgaggatgttgc +ac------------ggacagcgaatctggccatcgagcttg------------actcagccacagatgtcgg +ccgggcctgt---gctggctgtcgggtcactcccggcgttgttcagtaccagtttaccgcaggtgtgcctgg +atccggcaagtcccgctctatcacccaagccgatgtggacgttgtcgtggtcccgacgcgtgagttgcgtaa +tgcctggcgccgtcgcggctttgctgctttcaccccgcatactgccgccagagtcacccaggggcgccgggt +tgtcattgatgaggctccatccctcccccctcacctgctgctgctccacatgcagcgggccgccaccgttca +cctccttggcgacccgaaccaaatcccagccatcgactttgagcacgctgggctcgtccccgccatcaggcc +tgacttagcccctacttcctggtggcatgttacccatcgctgccctgcggatgtgtgtgagctgatccgtgg +tgcataccccatgatccagaccactagccgggtcctccgttcattgttctggggtgag------cctgccgt +cgggcagaaactagtgttcacccaggcggccaaggccgccaaccccggctcagtgacggtccacgaggcgca +gggcgctacctacacggagaccactattattgccacggcagatgcccggggccttattcagtcgtcacgggc +tcatgccatcgttgctctgacgcgccacactgagaagtgcgtcatcattgacgcaccaggcctgcttcgcga +ggtgggcatctccgatgcaatcgttaataacttt------------------------------tttctcgc +tggtg--gcgaaattggtcaccagcgcccatctgttattccccgtggcaaccctgacgccaatgttgacac- +-----cctggctgccttcccgccgtcttgccagattagtgccttccatcagttggctgaggagcttggccac +agacctgctcctgttgcagctgttctaccaccctgccctgagctcgaacagggcctcctctacctgccccag +gagctcaccacctgtgatagtgtcgtaacatttgaattaacagacattgtgcactgccgcatggctgcccca +agccagcgcaaggccgtgctgtccacacttgtgggccgctacggccgtcgcacaaagctctacaatgcttcc +cactctgatgttcgcgactctctcgcccgttttatcccggccattggccccgtacaggttacaacttgtgaa +ttgtatgagctagtggaggccatggtcgagaagggccaggatggctccgccgtccttgagctcgacctttgc +aaccgcgacgtgtccaggatcaccttcttccagaaagattgtaacaagttcaccacaggtgagaccattgcc +catggtaaagtgggccagggcatctcggcctggagcaagaccttctgtgccctctttggcccttggttccgt +gctattgagaaggctattctggccctgctccctcagggtgtgttttacggtgatgcctttgatgataccgtc +ttttcggcggctgtggctgcagcaaaggcatccatg---gtgtttgagaatgacttctctgagtttgactcc +acccagaataacttctctct------------------gggcctggagtgtgctattatggaggagtgtggg +atgccgcaatggcttatccgcttgtatcaccttataaggtctgcgtggattctgcaggctccgaaggagtct +ctgcgagggttttggaagaaacactctggtgagcccggcactcttctatggaacactgtttggaatatggcc +gtcattacccactgttatgacttccgcgatttgcaggtggctgcctttaaaggtgatgattcgatagtgctt +tgcagtgagtatcgtcagagcccaggagctgctgtcctgatcgccggctgtggcttgaagctgaaggtggat +ttccgcccgatcggtttgtatgcaggtgttgtggtggcccccggccttggcgcgcttcctgatgttgtgcgc +ttcgccggccggcttaccgagaagaattggggccctggccctgagcgggcggagcagctccgcctcgctgtc +agtgatttcctccgcaagctcacgaatgtagctcagatgtgtgtggatgttgtttcccgtg-------tcta +tggggtttcccctgggctcgttcataacctgattggcatgctacaggctgttgctgatggcaaggcacattt +caccgagtcagtaaaaccagtgcttgacctgacaaattcaattctgtgtcgggtggaatgaataacatgtc- +t----------------tttgctgcgcccatgggt---------tcgcgaccatgcgccctcggcctatttt +gttgctgctcctcatgtttttgcctatgctgcccgcgc---------------------------------- +-caccgc------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggttc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----caatcccctatattcat---- +--------------ccaaccaaccccttcgcccccgatgtcaccgctgcggccggggctggacctcgtgttc +gccaacccgcccg---------------accactcggctccgcttggcgtgaccaggccca----------- +------gcgccccgccgctgcctcacgtcgtagacctgccaca---------gctggggccgcgccgctaac +cgcggtcgctccggcccatgacaccccgccagtgcccgatgtcgattcccgcggcgccatcttgcgccggca +gtataacctatcaacatctccccttacctcttccgtggccaccggcaccaacctggttctttatgctgctcc +ccttagcccacttctaccccttcaggacggcactaatactcatataatggccacggaagcttctaattatgc +ccagtaccgggttgcccgtgccacaatccgttaccgcccgcttgttcccaacgctgtcggcggttacgccat +ttccatctcattttggccacagaccaccaccaccccgacgtccgttgatatgaattcaataacttcgacgga +tgttcgtattttagtccagcccggcatagcctctgagcttgtgatcccaagtgagcgcctacactatcgtaa +ccaaggttggcgctccgtcgagacctccggggtggctgaggaggaggctacctctggtcttgttatgctttg +catacatggctcacccgtaaattcctacactaatacaccttataccggtgccctcgggctgctggactttgc +ccttgagcttgaatttcgcaacctcacccccggtaacactaacacgcgggtctcccgttattccagcactgc +tcgccaccgccttcgtcgcggtgcggacgggactgccgagctcaccaccacggctgctacccgttttatgaa +ggacctctatttca---ctagtaccaat---ggtgtcggtgagatcggccgcgggatagctctcaccctgtt +caaccttgctgacactctgcttggtggcctgccgacagaattgatttcgtcggctggtggccagctgttcta +ctctcgtcccgtcgtctcagccaatggcgagccgactgttaagctgtatacatctgtagagaatgctcagca +ggataagggtattgcaatcccgcatgacattgacctcggggaatctcgtgtggttattcaggactatgataa +ccaacatgaacaggaccggccgacgccttcgccagctccatcgcgccctttttctgtccttcgagctaatga +tgtgctttggctctc-----------------------------tctcaccgctgccgagtatgac------ +caatccacttatggctcttcgactggcccagtttatgtctctgactctgtgaccttggt---taatgtcgcg +accggcgcgcaggccgttgcccggtcgctcgattggaccaaggtcacacttgacggccgccccctctccacc +at-----ccagcagtactcgaagaccttctttgtcc-tgccgctccgcggtaagctctctttctgggaggca +ggcacaactaaa--gccgggtacccttataattataataccactgctagcgaccaactgctcgtcgagaatg +ccgccgggcac------cgggttgctat-ttccacttacaccactagcctggg--------------tgctg +gacccgtttccatttc-tgcggttgctgttttagccccccactctgcgctagcattgcttgaggataccttg +gatt---------accctgcccgcg----cccatacttttgatgatttctgcccagagtgccgccccc---t +tggcctccagggctgtgctttccagtc--------tactgtcgctgagcttcagcgtct------------- +--------taagatgaaggtgggtaaaactcgggagttatagttta-ttt------gctt----------gt +gcccccct--------tc------tttctg------tt-----------------gcttatt-t-------c +tcttttct----gcg----------------ttccgcgctccctg--------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>AF060669.1/17277/1-7277 |Hepatitis E virus strain HEVUS2 polyprotein (ORF1), (ORF3), and capsid protein (ORF2) genes, complete cds +------------tcgacag------ggggcagacca-cgtatg-------------t-----ggtcgatgc- +---catggaggcccatcagttcattaaggctcctggcattactactgctattgag---caggctgctctggc +tgcggctaattccgccttggcgaatgctgtggtggttcggccgtttctttctcgtgtgcaaactgagattct +tattaatttgatgcaaccccggcagttggtcttccgccctgaggtgctttggaatcatcctatccagcgggt +tatacataatgaattagagcagta---ctgccgggccc-gggctggtcgttgtttggaggttggagcccacc +cgaggtccattaatgacaaccctaatgtcttgcataggtgttttcttagaccggtcggccgagatgttcagc +gctggtattctgcccctacccgtggtcctgcggccaattgccgccgctccgcgttgcgtggtctcccccctg +tcgaccgcacctattgttttgatggattttcccgttgtgcttttgctgcagagaccggtgtggccctttact +ctttgcatgacctttggccagctgatgttgcagaggctatggcccgccatgggatgacacgcttatacgccg +cactgcacctt-ccccccgaggtgctgctaccacccggcacctaccacacaacctcgtacctcttgattcac +gatggcaaccgcgctgttgtaacttacgagggcgatactagtgcgggctataatcatgatgtctccatactt +cgtgcatggatccgtactactaaaatagttggtgaccatccattggtcatagagcgagtgcgggccattggg +tgtcattttgtgctgctgctcaccgcagcccctgaaccgtcacctatgccttatgttccctaccctcgttca +acggaggtgtatgtccggtctatatttggccctggc---------ggctccccatccttgtttccatcagcc +t----------gctctactaaatcta-cctttcatgctgtcccggttcacatctgggatcrgctcatgctct +ttggtgccaccctgracgatcaggcgttctgctgttcacggcttatgacttacctccgtggtattagttata +aggtcactgtcggtgcgcttgtcgctaatgaggggtggaacgcctctgaggatgctcttactgcagtgatca +ctgcggcctatctgaccatctgccatcagcgttaccttcgcacccaggcgatttccaagggcatgcgccggt +tggaggttgagcatgctcagaaatttatcacaagactctacagctggctatttgagaagtc---------tg +gccgtgactacatccccggccgccagcttcaattttatgcacaatgccgacggtggctttctgcaggcttcc +acctaraccccaggrtgcttgtctttgatgaatcagtgccatgc---cgttgcaggacgtttttgaagaa-- +----ggtcgcgggtaaattctgctgttttatgcggtggctggggcagga------gtgtacctgcttcttgg +----------------agccagccgagggtttagttggtgatcaaggt--------catgacaacgaggcct +atgaaggttctgaggtcgacccagctgagcctgcacatcttgatgtctcggggacttatgccgtccatgggc +accagcttgaggccctctatagggcacttaatgtcccacatgatattgccgctcgagcctcccgactaacgg +ctactgttgagctcgttgctagtccggaccgcttagagtgccgcactgtacttggtaataagaccttccgga +cgacggtggttgatggcgcccatcttgaagcgaatggccc------------------------tgaggagt +atgttctgtcatttgacgcctctcgccagtctatgggggccgggtcgcacagcctcacttatgagctcaccc +ctgccggtctgcaggtaaagatttcatct-------aatggtctggattgcactgccacattcccc---ccy +ggtggcgcccctagcgccgcgccgggggaggtggcsgccttctgcagtgctctttatagatacaataggttc +acccagcggcattcgctgacaggcggactatggctacatcctgaggggctgctgggtatcttccccccattc +tcccctgggcatatttgggagtctgctaaccccttttgcggtgaggggactttgtatacccgaacctggtca +acctctggtttttctagtgatttctccccccctgaggcggccgctcctgcttcggctgccgcccc----ggg +gttgccct---accctactccacctgttagtgatat-----------------ctgggtgtt---------- +---------accaccgccc----tcagaggaat--------------ctcatgttgatgcggcatctgtacc +ctctg------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttcctgagcctgctggattgaccagc +cctattgtgcttacc----------------------cccccccccccccctcctcccgtgcgtaagccggc +aacatcccc--------------------------------------gcctccccgcactcgccgtc----- +-------------------tcctttacacctaccccgacggcgccaaggtgtatgcggggtcattgtktgag +tcagactgtgattggttagtcaatgcctcaaaccctggccatcgccccgggggtggcctctgccatgctttt +tatcaacgtttcccagaagcgt------tctactcgactgaattcatcatgcgcgaggg---ccttgcagca +tacactttaaccccgcgccctattatccatgcagtggctcccgactatagggttgagcaaaacccgaagagg +cttgaggcagcgtaccgggaaacttgctcccgtcgtggcaccgctgcctacccgcttttgggctcgggtata +taccaggtccctgttagcctcagttttgatgcctgggaacgcaatcaccgccccggcgatgagctttacttg +acagagcccgccgcagcc-------------------------------------------------tggtt +tgaggctaataagccggcgca--------------------------------------------------- +------------------------------------------gccggcgcttactataactgaggacacggc +cc------------gtacggccaacctggcattagagattg------------atgccgccacagaggttgg +ccgtgcttgt---gccggctgcaccatcagccccgggattgtgcactatcagtttaccgccggggtcccggg +ctcaggcaagtcaaggtccatacaacagggagatgtcgatgtggtggttgtgcccacccgggagctccgtaa +cagctggcgtcgccggggttttgcggccttcacacctcacacagcggcccgtgttactatcggccgccgcgt +tgtgattgatgaggctccatctctcccaccgcacctgctgctgttacacatgcagcgggcctcctcggtcca +tctccttggtgatccaaaccagattcctgctattgattttgagcatgccggcctggtccccgcgatccgccc +cgagcttgcgccaacgagctggtggcacgttacacaccgttgcccggccgatgtgtgcgagctcatacgtgg +ggcctaccccaaaattcagaccacgagccgtgtgctacggtccctgttttggaacgaa------ccggccat +cggccaaaagttggtttttacgcaggctgctaaggctgccaaccctggtgcgattacggttcacgaagctca +gggtgctactttcacggagaccacaattatagccacggccgacgctaggggcctcattcagtcatcccgggc +ccatgctatagtcgcactcacccgccatactgagaagtgtgttattttggatgcccccggcttgttgcgcga +ggtcggcatttcggatgttattgtcaataacttt------------------------------ttccttgc +cggtg--gagaggtcggccatcaccgcccttctgtgatacctcgcggcaatcctgatcagaacctcgggac- +-----tctacaggcctttccgccgtcatgtcagatcagtgcttaccatcagttggctgaggaactaggtcat +cgcccggcccctgtcgccgccgtcttgcccccttgccctgagcttgagcagggcctgctctatatgccacaa +gaacttactgtgtccgatagcgtgctggtttttgagcttacggatatagtccactgccgtatggccgcccca +agccagcgaaaggctgttctctcaacgcttgtggggaggtacggccgtaggactaaattatatgaggcggcg +cattcagatgtccgtgagtccctagcgaggtttatccccaccatcgggcctgttcgggctaccacatgtgag +ctgtacgagctggttgaagccatggtagagaagggtcaggacggatctgccgtcctagagctcgacctttgc +aatcgtgacgtctcgcgcatcacatttttccaaaaggattgcaataagtttacaactggtgagactatcgcc +catggcaaggttggccagggcatatcggcctggagcaagaccttctgtgctctgtttggcccgtggttccgc +gccattgaaaaggaaatattggccctactcccgcctaatatcttttatggcgacgcctatgaggagtcagtg +tttgctgccgctgtgtccggggcagggtcatgtatg---gtatttgaaaatgacttctcagagtttgacagt +acccagaataatttctctct------------------cggccttgagtgtgtggttatggaggagtgcggc +atgccccaatggttaattaggttgtaccatctggtccggtcagcctggattttgcaggcgccgaaggagtct +cttaaggggttttggaagaagcactctggtgagcctggtacccttctctggaacactgtctggaacatggcg +attatagcacattgctaygagttccgtgactttcgtgttgccgccttcaagggtgatgattcagtggtcctc +tgtagtgactaccgacagrgccgtaacgcggctgccttaattgcaggctgtgggctcaaattgaaggttgat +taccgccctatcgggctatatgctggagtggtggtggcccccggtttggggacactgcccgatgtggtgcgt +tttgccggtcggttatctgagaagaattggggccctggcccggagcgtgctgagcagctgcgtcttgctgtt +tgtgatttccttcgagggttgacgaatgttgcgcaggtctgtgttgatgttgtgtcccgtg-------tcta +tggagttagccccgggctggtacataaccttattggcatgctgcagaccattgctgatggcaaggcccactt +tacagaraatattaaacctgtgcttgaccttacaaattccatcatacaacgggtggaatgaataacatgtc- +t----------------tttgcatcgcccatggg------------atcaccatgcgccctagggctgttct +gttgttgctcttcgtgcttttgcctatgctgcccgcgc---------------------------------- +-caccgg------ccggccagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggtgc +cggcggtg-gtttctggggtgacagg--gttgattctcagcccttcg----ccctcccctatattcat---- +--------------ccaaccaaccccttcgccgccgatgtcgtttcacaacccggggctggaactcgccctc +gacagccgccccg---------------cccccttggytccgcttggcgtgaccagtccca----------- +------gcgcccctccgctgccccccgtcgtcgatctgcccca---------gctggggctgcgccgctgac +tgccgtgtcaccggctcctgacacagcccctgtacctgatgttgactcacgtggtgctattctgcgccggca +gtacaatttgtccacgtccccgctcacgtcatctgtcgcttcgggtactaatttggtcctctatgctgcccc +gctgaatcccctcttgcctctccaggatggtaccaacactcatattatggctactgaggcatccaattatgc +ccagtatcgggttgttcgagctacaatccgttatcgcccgctggtgccgaatgccgttggtggctatgccat +ttccatttctttctggccccaaactacaactacccctacttctgtcgatatgaattctattacttccacyga +tgttaggattttggttcagcccggtattgcctccgagctagtcatccccagtgagcgccttcattaccgtaa +tcaaggctggcgctctgttgagaccacgggtgtggctgaggaggaggctacttccggtctggtaatgctttg +cattcatggctctcctgttaattcctacactaatacaccttacactggtgcgctggggcttcttgattttgc +actagagcttgaatttaggaatttgacacccgggaacaccaacacccgtgtttcccggtataccagcacagc +ccgccaccggctgcgccgtggtgctgatgggactgctgagcttactaccacagcagccacacgtttcatgaa +ggacctgcacttcg---ctggcacgaat---ggcgttggtgaggtgggtcgtggtatcgccctgacactgtt +caatctcgctgatacgcttctcggcggtttaccgacagaattgatttcgtcggctgggggccaactgtttta +ctcccgcccggttgtctcagccaatggcgagccaacagtaaagttatatacatctgttgagaatgcgcagca +agacaagggcatcaccattccacatgatatagacctgggtgactcccgtgtggttatccaggattatgataa +ccagcaygagcaagaccgacctactccgtcacctgccccctctcgccccttctcagttcttcgtgccaatga +tgttttgtggctttc-----------------------------cctcactgccgctgagtatgac------ +cagactacgtatgggtcgtccaccaaccctatgtatgtctctgacacagttacgcttgt---taatgtggct +actggtgctcaggctgttgcccgctcccttgattggtctaaagttactctggacggccgcccccttactacc +at-----tcagcagtattctaagacattttatgttc-tcccgctccgcgggaagctgtccttttgggaggct +ggcacgactaag--gccggctacccttacaattataatactaccgctagtgaccaaattttgattgagaatg +cggccggccac------cgtgtcgctat-ttccacctataccactagcttagg--------------tgccg +gtcctacctcgatctc-tgcggtcggcgtactggctccacactctgcccttgccgttcttgaggatactatt +gatt---------accccgcccgtg----cccatacttttgatgatttttgcccggagtgccgtaccc---t +aggtttgcagggttgtgcattccagtc--------tactattgctgagctccagcgttt------------- +--------aaaaatgaaggtaggtaaaacccgggagtcttaattaa-tt----c--c--t-tct------gt +gccc-cct--------tc-gtag-tttctttcgct-tt--------------------tatt-t-------c +ttatttct----gc----------------tttccgcgctccctg---------------------gaaaaa +aaaaaaa---------------aaaaaaaaaa---------------------------------------- +------------------------------------------aaaa-------------------------- +------------------------------------------------------------------------ +----------- +>AF028091.2/15083/1-5083 |Hepatitis E virus nonstructural polyprotein gene, complete cds +------------------------------------------------------------------------ +---catggaggcccatcagtttctcaaggctcccggcatcactactgctgttgag---caggctgctctagc +cacggccaactctgccctggcgaatgctgtggtagttaggccttttctttctcaccagcagattgagattct +cattaacctaatgcaacctcgccagcttgttttccgccccgaggttttctggaatcaacccatccagcgtgt +cattcataacgagctggagcttta---ctgccgcgctc-gctccggccgctgtcttgaaattggcgcccatc +cccgctcaataaatgataatcctaatgtggtccaccgctgcttcctccgccctgttgggcgtgatgttcagc +gctggtatactgctcccactcgcgggccggctgctaattgccgccgttccgcgttgcgtgggcttcccgctg +ctgaccgcacatactgcttcgacgggttttctggctgtagctgccccgccgagacgggtatcgccctttact +ccctccatgatatgtcaccatctgatgttgccgaggccatgttccgccatggtatgacgcggctttatgctg +ccctccatctt-ccgcctgaggtcttgctgccccctggcacatatcgcaccgcatcgtatttgctgattcat +gacggcaggcgcgttgtggtgacgtatgagggtgatactagtgctggttacaaccacgatgtctccaacttg +cgctcctggattagaaccaccaaggttaccggagaccatcccctcgttatcgagcgggttagggccattggc +tgccactttgttctcttgctcacggcagccccggagccatcacctatgccttatgttccttacccccggtct +accgaggtctatgtccgatcgatcttcggcccgggt---------ggtaccccttccttattcccaacctca +t----------gctccactaagtcga-ccttccacgctgtccctgcccatatttgggaccgtcttatgctgt +tcggggccaccttggatgaccaagccttttgctgctcccgtttaatgacctaccttcgcggcattagctaca +aggtcactgttggtacccttgtggctaatgaaggccggaacgcctctgaggacgccctcacagctgtcatca +ctgccgcctatcttaccatttgccaccagcggtatctccgcacccaggctatatccaaggggatccgtcgtc +ttgaacgggagcatgaccagaagtttataacacgcctttacagctggctcttcgagaagtc---------cg +gccgtgattacatccctggccgtcagttggagttctacgcccagtgtaggcgctggctttcggccggctttc +atcttgatccacgtgtactggtttttgacgagtcggccccctgc---cattgtaggactgtgatccgcaa-- +----ggcgctctcgaagttttgctgctttatgaagtggcttggtcagga------gtgcacctgttttcttc +----------------aacctgcagaaggcgtcgtcggcgaccagggt--------catgataacgaatcct +atgaggggtccgatgttgaccctgctgagtccgccattagtgacatctctgggtcctatgtcgtccctggca +cagccctccaaccgctctaccaggccctcgatctccccgatgagattgtggctcgcgcgtgccggctgaccg +ccacagtaaaggtctcccaggtcgatgggcggatcgattgcgagacccttcttggtaacaaaaccttccgca +cgtcgtttgtcgacggggcggtcttagagaccaatggccc------------------------agagcgcc +acaatctctcctttgatgccagtcagagcactatggccgctggccctttcagtctcacctatgccgcctctg +cagctgggctggaggtgcgctatgttggt-------gccgggcttgaccatcgggcgatttttgcc---ccc +ggtgtttcaccccggtcaaaccccggcgaggtcaccgccttctgctctgccctatataggttcaaccgtgag +gcccagcgccattcgctgaccggtaacttatggttccatcctgaggggcttattggcctctttgccccgttt +tcgcctgggcatgtctgggagtcggctaaaccattctgtggcgagagcacactttacacccgtacttggtcg +gaggttgatgccgtctctagtccaacccggcccgatttgggttttatgtctgagcctcctatacctagtagg +gccgccac----------------------------gcctac-----------cttggcggc---------- +---------ccctctaccc----ccccttgcac--------------cggacccttcccctccttcttctgc +cccgg------------------------------------------------------------------- +-------------------------------------------------------------cgc-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------tcgatgagccggct------tctgcc +gctacctc-----------------cgg------------------------ggtcccggccataacccacc +aga----------------------------------------------cggcccggcaccgccgcc----- +-------------------tgctcttcacctacccggatggctctaaggtattcgccggctcgctgttcgag +tcgacatgcacgtggctcgttaacgcgtctaatgttgaccactgccctggcggcgggctttgccatgcattt +taccaaaggtaccccgcctcct------ttgatgctgcctgttttgtgatgcgcgacgg---tgcggccgcg +tacacactgaccccccggccaataattcatcgtgtcgcccctgattataggttggaacataacccaaagagg +cttgaggctgcttatcgggagacttgttcccgcctcggtaccgctgcatacccgctcctcgggaccggcata +taccaggtgccgatcggtcccagctttgacgcctgggagcggaaccaccgccccggggatgagttgtacctt +cctgaacttgctgccaga-------------------------------------------------tggtt +tgaggccaataggccgacccg--------------------------------------------------- +------------------------------------------cccaactctcactataactgaggatgctgc +ac------------ggacagcgaatctggccatcgagcttg------------actcagccacagatgtcgg +ccgggcctgt---gctggctgtcgggttacccctggcgttgttcaataccagtttaccgcaggtgtgcctgg +atccggcaagtcccgctccatcacccgagccgatgtggacgttgtcgtggtcccgacgcgcgagttgcgtaa +tgcctggcgccgtcgcggctttgctgccttcaccccgcacactgccgctagagtcaccgacgggcgccgggt +tgtcattgatgaggctccatccctcccccctcacctgttgctgctccacatgcagcgggccgccaccgtcca +ccttcttggcgacccgaatcagatcccagccatcgactttgagcaccctgggctcgtccccgccatcaggcc +cgacttagcccctacctcctggtggcatgttacccatcgctgccctgcggatgtatgtgagttgatccgtgg +tgcattccccatgatccagaccactagccgggttctccgttcgttgttctggggtgag------cctgccgt +cgggcagaaactagtgttcacccaggcggccaagcccgccaaccccggctcagtgacggtccacgattcgca +gggcgctacctacacttataccactattattgccacagcagatgcccggggccttattcagtcgtctcgggc +tcatgccattgttgctctgacgcgccacactgagaagtgggtcatcattgacgcaccaggcctgcttcgcga +ggtgggcatctccgatgcaatcgttaataacttt------------------------------ttcctcgc +tggtg--gcgaaattggtcatcagcgcccatctgttattccccgtggcaaccctgacgccaatgttgacac- +-----cctggctgccttcccaccgtcttgccagattagtgccttccatcagttagctgaggagctcggccac +agacctgcccctgttgcagctgttctaccaccctgccccgagctcgaacagggcctcctctatctgccccag +gagctcaccacctgtgatagtgtcgtaacatttgaattaacagatattgtgcactgccgcatggccgccccg +agccagcgcaaggccgtagtgtccacactcgtgggccgctacggccgtcgcacaaagctctacaatgcttcc +cactctgatgttcgcgactctctcgcccgttttatccctgccattggccccgtacaggtcacaacctgtgaa +ttgtacgagttagtggaggccatggtcgagaagggccaggatggctccgccgtccttgagctcgatctttgc +aaccgtgatgtgtccaggatcaccttcttccagaaagattgtaacaagttcaccacaggtgagaccattgct +catggtaaagtgggccagggcatctcggcctggagcaagaccttctgcgccctctttggcccttggtttcgc +gccattgagaaggctattctggccttgctccctcagggtgtgttttacggtgatgcctttgatgacaccgtc +ttctcagcggctgtggccgcagcaaaggcatccatg---gtgtttgagaatgacttttctgagtttgactcc +acccagaataacttttcttt------------------gggcctagagtgtgctattatggaggagtgcggg +atgccgcaggggctcatccgcttgtatcaccttataaggtctgcgtggatcctgcaggccccgaaggagtct +ctgctagggttttggaagaaacactccggcgagcccggcactcttctatggaatactgtctggaatatggct +gttattacccactgttatgacttccgcgatttgcaggtagctgcctttaaaggtgatgattcgatagtgctt +tgcagtgagtatcgtcagagtccaggagctgctgtcctgatcgccggctgtggcttgaagttgaaggtagat +ttccgcccgatgcgtttgtatgcaggtgttgtggtggcccccggccttggcgcgcttcctgatgtcgtgcgc +ttcgccggccggcttaccgagaagaattggggccctggccctgagcgggcggacgagctccgcatcgctgtt +agtgacttcctccgcaagctcacgaatgtggctcagatgtgtgtggatgttgtttcccgtg-------ttta +tggggtttcccctgggctcgttcataacctgattggcatgctacaggctgttgctgatggcaaggcacattt +cactgagtcagtaaaaccagtgctcgacctgacaaattcaatcttgtgtcgggtggaatga----------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>X99441.1/17194/1-7194 |Hepatitis E virus ORF1, ORF2 & ORF3 +--------------------------aggcagacca-catatg-------------t-----ggtcgatgc- +---catggaggcccatcagtttatcaaggctcctggcatcactactgttattgag---caggctgctctagc +agcggccaattctgtcttggcgaatgctgtggtagttaggccttttctctctcaccagcagattgagatcct +tattaacctaatgcaacctcgccagcttgttttccgccccgaggttttctggaatcatcccatccagcgtgt +cattcataacgagctggagctcta---ctgccgcgccc-gctccggccgctgtcttgagatcggcgcccatc +cccgctcgataaatgataatcctaatgtggtccaccgctgcttcctccgccctgtcgggcgtgatgttcagc +gctggcatactgctcccactcgcgggccggatgctaactgccggcgttccgcgttgcgtgggcttcccgctg +ctgaccgcacttactgcttcgacgggttttctggctgtaactttcctgccgagacgggcgtcgccctctact +ccctccatgatatgtcaccatctgatgtcgccgaagccatgttccgccatggtatgacgcggctttatgctg +ccctccatctt-ccacctgaggttttgctgccccctggcacataccgcaccgcttcgtatttgctgattcac +gacggcaggcgcgttgtggtgacgtatgagggtgacactagtgctggttataaccacgatgtctccaacctg +cgctcctggattagaaccaccaaggttaccggagaccatcccctcgttatcgagcgggtcaaggccattggc +tgccactttgttctcttgctcacggcagccccggagccatcacctatgccttatgtcccctacccccggtct +accgaggtctatgtccgatcgatcttcggcccgggt---------ggtaccccttccttattcccaacctca +t----------gctccactaagtcga-ccttccatgctgtccctgcccatatttgggaccgtctaatgctgt +tcggggccactttggatgaccaagccttttgctgctcccgtttaatgacctatcttcgcggcattagctaca +aggtcactgttggcacccttgtggctaatgaaggctggaatgcctctgaggacgccctcacagctgtcatca +ctgccgcctaccttaccatttgccaccagcggtatctccgcacccaggctatatccaaggggatgcgtcgtc +tggaacgggagcatgcccagaagtttataacacgcctgtacaggtggctcttcgagaagtc---------cg +gccgtgattacatccctggtcgtcagttggagttctacgtccagtgtaggcgctggctttcggacggctttc +atcttgatccacgggtgctggtttttgacgagtcggccccctgc---cattgtaggaccgtgattcggaa-- +----ggcgctctcgaagttctgctgctttatgaagtggcttggtcagga------gtgcacctgtttccttc +----------------aacctgcagaaggcgtcgtcggcgaccagggt--------catgataatgaagcct +atgaggggtccgatgttgaccctgctgagtccgccattagtgacatctctgggtcctatgtcgtctctggca +cagacctccaaccgctctaccaggtcctcgatctccccgatgagattgtggctcgtgcgtgtcggctgatcg +ccacagtaaaggtatcccaggtcgatgggcggatcgattgcgagacccttcttggtaacaaaaccttccgca +cgtcgtttgtcgacggggcggtcttagagaccaatggtcc------------------------agagcgcc +acaatctctcctttgatgccagtcagagcactatggccgctggctctctcagtctcacctatgccgtctctg +cagacgggctggaggtgcgctatgttgct-------gccgggcttgatcatcgggcggtttttgcc---ccc +ggtgtttcaccccggtcaacccccggcgaggtcaccgccttctgctctgccctatataggttcaaccgtgag +gtccagcgccattcgctgaccggtaacctatggttccatcctgaggggcttattggcctctttgccccgttt +tcgcccgggtatgtctgggagtcggctaatccgttttgtggggagagcacactttacacccgttcttggtcg +gaggttgatgccgtctctagtccagcccggcccgacttaggttttgtgtctgagccctctatacctagtagg +gccgccac----------------------------gcctac-----------cttggcggc---------- +---------ccctctaccc----ccccctgcac--------------cggacccttccccccctccttctgc +cccgg------------------------------------------------------------------- +-------------------------------------------------------------cgc-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ccgatgagccggct------tctggt +actaccgc-----------------cgg------------------------ggccccggccataacccacc +aga----------------------------------------------tggcccggcaccgccgcc----- +-------------------tgctcttcacctacccggatggctctaaagtgttcgccggctcgctgttcgag +tcgacatgcacgtggcccgttaacgcgtctaatgttgaccatcgccctggcggcgggctttgccatgcattt +taccaaaggtaccccgcctcct------ttgatgctgcctcttttgtgatgcgcgacgg---tgcggccgcg +tacacactaaccccccggccaataattcatgctgtcgcccctgattataggttggaacataacccaaagagg +cttgaggctgcttatcgggagacttgttcccgcctcggtaccgctgcatacccgctcctcgggaccggcata +taccaggtgccgatcggtcccagctttgacgcctgggagcggaatcaccgccccggggatgagttgtacctt +cctgaacttgctgccaga-------------------------------------------------tggtt +tgaggccaataggccgacccg--------------------------------------------------- +------------------------------------------cccaactctcgctataactgaggatgttgc +ac------------ggacagcgaatctggcaatcgagcttg------------actcagccacagatgtcgg +ccgggcctgt---gccggctgtcgggttacccccggcgttgttcagtaccagtttaccgcaggtgtgcctgg +gtccggcacgtcccgctctatcacccaagccgatgtggacgttgtcgtggtcccgacgcgtgagctgcgtaa +tgcctggcgccgtcgcggttttgttgctttcaccccgcatactgccgctagagtcacccaggggcgccgggt +tgtcattgatgaggctccatccctcccccctcacctgctgctgctccacatgcagcgggccgccaccgtcca +ccttcttggcgacccgaatcagatcccagccattgactttgagcacgctgggctcgtccccgccatcaggcc +cgacttagcccctacctcctggtggcatgttacccatcgctgccctgcggatgtatgcgagttgattcgtgg +tgcataccccatgatccagaccactagccgggttctccgttcgttgttctggggtgag------cctgccgt +cgggcagaaactagtgttcacccaggcggccaaggccgccaaccccggctcagtgacagttcacgaggcgca +gggcgctacctacacggagaccactattattgccacggcagacgcccggggccttattcagtcgtctcgggc +tcatgccattgttgctctgacgcgccacactgagaagtgcgtcatcattgacgcaccaggcctgctccgcga +ggtgggcatctccgatgcaattgttaataacttt------------------------------ttcctcgc +tggtg--gcgaaattggtcatcaacgcccatctgttattccccgtggcaaccctgacgccaatgttgacac- +-----cctggctgccttccctccgtcttgccagattagtgtcttccatcagttgggtgaggagcttggccac +agacctgtccctgttggagttgttctaccacccagacccgagctcgaacagggcctcctctacctgccccag +gagatcaccacctgtgatagtgtcgtgacatttgaattaacagatattgtgcactgccgaatggccgccccg +agacagagcaaggccgtggtgaccacactcgtggggcgctacggacgacgcacaaagctgtacaatacttct +cactctgatagtcgcgaatctctcgcccgaattatcccggccattggccccgtacaggttacaacttgtgaa +ttgtacgagctagtggaggccatggtcgagaagggccaagatggctccgccgtccttgagctcgaacattgg +aatcgtgacgtgtccaggatcacctttttccagaaagattgtaacaagttcaccacaggtgaggccattgcc +catgttaaagtgggccagggcatctcggcctggagcaagaccttctgccccctctttggcccttggttccgc +gctattgagaaggccattctggccctgctccctcagggtgtgttttatggtgatgcctttgatgacaccgtc +ttctcggcggctgtgcccgcagcaaaggcatctatg---gtgtttgagaatgatttttctgagtttgactcc +acccagaataatttttctct------------------gggcctagagtgtgctattatggaggagtgtggg +atgccgcagtggctcatccgcttgtatcatcttataaggtccgcgtggatcttgcaggccccgaaggagtct +ctgcgagggttttggaagaaacactccggtgagcccggcactcttctatggaatactgtctggaatatggcc +gttattacccactgttatgacttccgcgatttgcaggtggctgcctttaaaggtgatgattcgattgtgctt +tgcagtgagtatcgtcagagtccaggagctgctgttctgatcgccggctgtggcttgaagctgaaggtagat +tttcgcccgatcggtctgtatgcaggtgttgtggtggcccccggccttggtgcgcttcctgatgttgtgcgc +tttgccggccggcttaccgagaagaattggggccctggccctgagcgggcggagcagctccgcctcgctgtt +agtgatttcctccgcaagctcacgaatgtagcacagatgtgtgtggatgttgtttcccgtg-------ttta +tggggtctcccccgggctcgttcataacctgattggcatgctacaggctgttgctgatggcaaggcacattt +cactgagtcagtaaaaccagtgctcgacctgacaaattcaatcctgtgtcgggtggaatgaataacatgtc- +t----------------tttgctgcgcccatgggt---------tcgcgaccatgcgccctcggcctatttt +gttgctgctcctcatgtttttgcctatgctgcccgcgc---------------------------------- +-caccgc------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggttc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----caatcccctatattcat---- +--------------ccaaccaaccccttcgcccccgatgtcaccgctgcggccggggctggacctcgtgttc +gccaatccgcccg---------------accactcggctccgcttggcgtgaccaggccca----------- +------gcgccccgccgctgccccacgtcgtagacctaccaca---------gctggggccgcgccgctaac +cgcggtcgccccggctcatgacaccccgccagtgcctgatgttgattcccgcggcgccatcttgcgccggca +gtataacctatcaacatctccccttacctcttccgtggctactggcactaatttggttctttatgccgcccc +tcttagcccgcttttaccccttcaggacggcaccaatactcatataatggccacggaagcttctaattatgc +ccagtaccgggttgcccgtgccacaatccgttaccgcccgctggtccctaacgccgtcggtggttacgccat +ctccatctcattctggccgcagaccaccaccaccccgacgtccgtcgatatgaattcaataacctcgacgga +tgttcgtattttagtccagcccggcatagcctctgagcttgtgatcccaagcgagcgcctacactaccgtaa +ccaaggttggcgctccgtcgagacttccggggtggctgaggaggaggctacctctggtcttgttatgctttg +catacatggctcacccgtaaattcctacactaatacaccctataccggcgccctcgggctgctggactttgc +ccttgagcttgagtttcgcaacctcacccccggtaacactaatacgcgggtttcccgttactccagcactgc +tcgccaccgccttcgtcgtggtgcggacgggaccgccgagctcaccaccacggctgctacccgctttatgaa +ggacctctatttta---ctagtactaat---ggtgtcggtgagatcggccgcgggatagccctcaccctgtt +taaccttgctgacactttgcttggcggcctgccgacagaattgatttcgtcggctggtggccagctgtttta +ttcccgtcccgttgtctcagccaatggcgagccgactgttaagttgtatagatctgtagagaatgctcagca +ggataagggtattgcaatcccgcatgacattgaccttggagaatctcgtgtggttattcaggattatgacaa +tcaacatgaacaagaccggccgacgccttctccagccccatcgcgccctttctctgcccttcgagctaacga +tgtgctttggctctc-----------------------------tctcactgctgccgagtacgac------ +cagtccacttatggctcttcgactggcccagtttatgtttctgactctgtgaccttggt---taatgttgcg +accggcgcgcaggccgttgcccggtcgctcgattggaccaaggtcacacttgacggtcgccctctctccacc +at-----ccagcagtactcgaagaccttctttgtcc-tgccgctccgcggcaagctctctttctgggaggca +ggtacaactaag--gccgggtacccttataattataataccactgctagcgaccaactgcttgtcgagaatg +ccgccgggcac------cgggttgctat-ctccacttacaccactagcctggg--------------tgctg +gccccgtctccatttc-tgcggttgccgtcttggccccccactctgcgctagcattgcttgaggataccttg +gact---------accctgcccgcg----cccatacttttgatgatttctgcccagagtgccgccccc---t +cggcctccagggctgcgctttccagtc--------tactgtcgctgagcttcagcgcct------------- +--------taagatgaaggtgggtaaaactcgggagttatagttta-ttt------gctt----------gt +gcccccct--------tc------tttctg------tt-----------------gcttatt-t-------c +tcttttct----gcg----------------ttccgcgctccctg--------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>X98292.1/17202/1-7202 |Hepatitis E virus, complete genome +---------------------------ggcagacca-cctatg-------------t-----ggtcgatgc- +---catggaggcccatcagtttatcaaggctcctggcatcactactgctattgag---caggctgctctggc +agcggccaactctgccctggcgaatgctgtggtagttaggccctttctctctcaccagcagattgagatcct +cattaacctaatgcaacctcgccagcttgttttccgccccgaggttttctggaaccaccccatccagcgtgt +tatccacaatgagttggagcttta---ctgccgtgccc-gctccggccgctgtcttgagattggtgcccatc +cccgctcaataaatgacaatcctaatgtggtccaccgctgcttcctccgccctgtcgggcgcgatgttcagc +gctggtatactgcccccactcgcgggccagctgctaattgccggcgttccgcactgcgcgggctctctgccg +ctgaccgcacttactgcttcgacgggttttctggttgtaactttcccgccgaaacgggcatcgccctctatt +ccctccatgatatgtcaccatctgatgtcgccgaggccatgttccgccatggtatgacgcggctttatgccg +ccctccatctt-ccgcctgaggtcttgttgcctcctggcacataccgcaccgcgtcgtatctgctgatccat +gacggcaggcgcgttgtggtgacgtacgagggtgacactagtgctggttataaccatgatgtttccaacctg +cgctcctggattagaaccactaaggtcaccggagaccaccctctcgttatcgagcgggttagggccattggc +tgtcactttgttctcttactcacggctgccccggagccatcacctatgccttatgtcccttacccccggtct +accgaggtctatgtccgatcgatcttcggcccgggc---------ggcaccccttccctattcccaacctca +t----------gctccactaagtcga-ccttccatgccgtccctgcccatatttgggaccgtcttatgctgt +tcggggccaccctggatgaccaagccttttgctgctcccgtctaatgacctaccttcgcggcattagctaca +aggttactgtgggcactcttgtggccaatgaaggctggaacgcctctgaggacgctctcacagctgtcatta +ctgccgcctaccttaccatctgccaccagcggtatctccgcacccaagctatatctaaggggatgcgtcgtt +tggagcgggagcatgcccagaaattcataacacgcctctacagttggctttttgagaagtc---------cg +gccgtgattatatccccggccgtcagttggagttctacgcccagtgtaggcgctggctctcggccggctttc +accttgacccacgggtgctggtttttgatgagtcggccccctgc---cactgcaggaccgcgattcgtaa-- +----ggcggtctcaaagttttgctgctttatgaagtggcttggccagga------atgtacctgctttctac +----------------agcctgcagagggtgccgctggcgaccagggc--------catgataatgaagcct +atgaggggtctgatgttgaccctgctgaatccgccattagtgatatatctgggtcctacgtagtccctggca +ctgccctccagccgctttatcaggcccttgacctccccgctgagattgtggcccgtgcaggccggctgaccg +ccacagtaaaggtctcccaggtcgacgggcggatcgattgtgagacccttcttggtaacaaaacctttcgca +cgtcgttcgttgacggggcggtcttagagaccaatggccc------------------------agagcgcc +acaatctctcttttgatgccagtcagagcactatggccgctggccccttcagtcttacctatgccgcctctg +ccgctgggctggaggtgcgctatgttgct-------gctgggcttgaccaccgggcggttttcgcc---ccc +ggcgtttcaccccggtcggcccctggcgaggtcaccgccttttgctctgccctatacaggtttaatcgtgaa +gcccagcgtcatgcgctgaccggtaatttttggttccatcctgaggggctccttggcctctttgccccgttt +tcgcccgggcatgtctgggagtcggctaatccattttgtggcgagagcacactctacacccgtacttggtcg +gaggttgatgctgtttctagtccagcccggcctgacttaggttttgcatctgagccttctatacctagcagg +gccgccac----------------------------acctac-----------cccggcggc---------- +---------tcttcaaccc----tcctctgcac--------------cggaccctttcccccccccctctgc +tccgg------------------------------------------------------------------- +-------------------------------------------------------------cgc-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------ttggtgagccggcc------cctggc +gttactgc-----------------cgt------------------------ggccccggccataacccacc +aga----------------------------------------------cggctcggcatcgccgcc----- +-------------------tgctcttcacctacccggatggctccaaggtatttgccggctcgctgtttgag +tcgacatgtacgtggcttgttaacgcgtctaatgttgaccatcgccctggcggcgggctctgccatgcattt +taccaaaggtaccccacctcct------ttgatgctgcctcttttgtgatgcgcgacgg---cgcggccgct +tatacattaaccccccggccaataattcatgccgtcgcccctgattataggttggaacataacccaaagagg +cttgaggccgcctaccgggagacttgctcccgtctcggcaccgctgcatacccgctcctcgggaccggcata +taccaggtaccgatcggtcccagtttcgacgcctgggagcggaaccaccgccccggtgatgagttgtatctt +cctgagcttgctgccaga-------------------------------------------------tggtt +cgaggccaataggccggcctg--------------------------------------------------- +------------------------------------------cccaactcttactataactgaggatgctgc +ac------------ggacagcgaacctggccatcgagcttg------------actcagccacagatgtcgg +ccgggcttgt---gctggttgtcgagtcacccccggcgttgtgcagtaccagtttactgcaggtgtgcctgg +gtccggcaagtcccgctctatcacccaagccgacgtggacgttgtcgtggtcccgacccgggagttgcgtaa +tgcctggcgccgccgcggcttcgctgctttcaccccgcacactgctgctagagtcactcaggggcgccgggt +tgtcattgatgaagctccatctcttcccccccacctgctgctgctccacatgcagcgggccgccaccgttca +ccttcttggcgacccgaaccagatcccagccatcgactttgagcacgccgggctcgtccccgccatcaggcc +tgacctagcccctacctcctggtggcatgttacccatcgttgccctgcggatgtatgtgagctgatccgtgg +tgcataccctatgatccagaccactagccgggtcctccgttcgttgttctggggtgag------cctgccgt +tgggcagaaactagtgttcacccaggcggctaaggctgccaaccccggttcagtgacggtccacgaggcaca +gggcgctacctatacagagaccaccattatcgctacggcagatgcccgaggcctcattcagtcgtctcgggc +tcatgccattgttgccctgacgcgccatactgagaagtgcgtcatcattgacgcgccaggcctgcttcgcga +ggtgggcatttccgatgcaatcgttaataacttt------------------------------ttccttgc +cggtg--gcgaaattggccaccaacgcccgtctgttatccctcgcggcaaccctgacacaaacgttgacac- +-----cttggctgccttcccgccgtcttgccagattagcgccttccaccagttggctgaggagcttggccat +agacctgcccctgttgcagctgttctaccgccctgccctgagctcgaacagggcctcctctatctgccccag +gagctcaccacctgtgatagtgttgtaacatttgaattaacagatattgtgcattgtcgcatggccgccccg +agtcagcgcaaggccgtgctgtccacgctcgtgggccgttacggccgtcgcacaaagctctacaatgcctct +cactctgatgttcgtgactctcttgcccgttttatcccgaccattggccccgtacaagttacaacctgtgaa +ttgtatgagctagtggaggccatggtcgagaagggccaggatggctccgccgtccttgagctcgacctctgc +aaccgtgacgtatccaggatcaccttcttccagaaagattgtaataagtttaccacgggagagaccatcgcc +catggtaaagtgggccagggcatttcggcctggagtaagaccttttgtgccctttttggcccctggttccgc +gctattgagaaggctattctggccctactccctcagggtgtgttttatggagatgcctttgacgacactgtc +ttctcggcggctgtggccgcagcaaaggcgtccatg---gtgtttgagaatgacttttccgagtttgactcc +acccagaataacttttcctt------------------gggcctagagtgcgctatcatggaggagtgcggg +atgccgcagtggctcatccgcttgtaccaccttataaggtctgcgtggatcctgcaggccccgaaggagtct +ctgcgagggttttggaagaaacactccggtgagcccggcactcttctttggaatactgtctggaacatggcc +gttattacccactgttatgattttcgtgatttgcaggtggctgcctttaaaggtgatgattcgatagtgctt +tgcagtgagtaccgtcagagtccaggagctgctgtcctgattgctggttgtggcttaaagctgaaggtggat +tttcgccctattggtctgtatgcaggtgttgtggtggcccccggccttggcgcgcttcctgacgttgtgcgc +ttcgccggccggctcactgagaagaattggggccctggccccgagcgggcggagcagctccgccttgctgta +agtgatttcctccgcaagcttacgaatgtagctcagatgtgtgtggatgttgtttctcgtg-------ttta +tggggtttctcctgggctcgttcataacctgattggcatgctacagactgttgctgatggcaaggcccattt +cactgagtcagtaaagccagtgctcgacctgacaaattcaatcctgtgtcgggtggaatgaataacatgtc- +t----------------tttgctgcgcccatgggt---------tcgcgaccatgcgccctcggcctattct +gttgttgctcctcatgtttttgcctatgttgcccgcgc---------------------------------- +-caccgc------ccggtcagccgtctggcc------------gccgtcgtgggcg-gcgcagcggcggttc +cggcggtg-gtttctggggtgaccgg--gttgattctcagcccttcg----caatcccccatattcat---- +--------------ccaaccaacccctttgcccccgatgtcaccgctgcggccggggctggacctcgcgttc +gccaacccgcccg---------------accactcggctccgcttggcgtgaccaggccca----------- +------gcgccccgccgctacctcacgtcgtagacctaccaca---------gctggggccgcgccgctaac +cgcggtcgccccggctcatgacaccccgccagtgcctgatgtcgactcccgcggcgctatcttgcgccggca +gtataacctatcaacatcccctctcacctctcccgtggccaccggcacaaatttggtcctttatgccgcccc +tcttagcccgcttttaccccttcaggacggcaccaatactcatataatggctacagaagcctctaactatgc +ccagtaccgggttgcccgtgccacaattcgttatcgcccgcttgtccccaatgctgttggtggttatgccat +ctccatctcgttctggccacaaaccaccaccactccgacgtccgttgatatgaattcaataacttcgacgga +tgttcgtattttagttcagcccggcatagcctctgagcttgtgatcccaagtgagcgcttacactatcgtaa +ccaagggtggcgctctgttgagacctccggggtggcggaagaggaggccacctctggtctcgttatgctttg +catacatggcttacccgtaaattcttacactaatacaccctacaccggcgccctcgggctgttggattttgc +ccttgaatttgagttccgcaacctcactcccggcaacaccaatactcgggtctctcgttactccagcactgc +tcgccaccgtcttcgccgcggtgcagatgggaccgccgagctcaccaccacggctgccacccgctttatgaa +ggatctctatttta---ctagtactaat---ggtgtcggtgagatcggccgcgggatagccctaaccctgtt +taatcttgctgacactctgcttggcggcctaccgacagaattgatttcgtcggctggtggccagctgttcta +ctcccgtcccgtcgtctcagccaatggcgagccgactgttaagctgtatacatctgtagagaatgctcagca +ggataagggtattgcaatcccgcatgacatcgacctcggggaatctcgtgtggtcattcaggattatgataa +ccaacatgagcaagatcggccgacaccttctccagccccatcgcgccctttttctgtcctccgagctaatga +tgtgctttggctttc-----------------------------tctcaccgctgccgagtatgac------ +cagtccacttacggttcttcgaccggcccagtctatgtttctgactctgtgaccctggt---taatgttgcg +accggcgcgcaggccgttgcccggtcgcttgactggaccaaggtcacacttgatggtcgccccctctccacc +at-----ccagcagtattcaaagaccttcttcgtcc-tgccgctccgcggtaagctctccttctgggaggca +ggtaccactaag--gccgggtacccctataattataataccactgctagcgatcaactgcttattgagaatg +ccgccgggcat------cgggttgctat-ttccacttacaccactagcctggg--------------tgctg +gccccgttgccatctc-tgcggttgctgttttggccccccactctgcgctagccctgcttgaggataccatg +gact---------accctgcccgcg----cccacacttttgatgatttctgcccagagtgccgccccc---t +tggcctccagggctgtgctttccagtc--------tactgtcgctgagcttcagcgcct------------- +--------taagatgaaggtgggtaaaactcgggagttatagttta-ttt------gctt----------gt +gcccccct--------tc------tttctg------ct-----------------gcttatt-t-------c +tcttttct----gcg----------------tttcgcgctccctg---------------------aaaaaa +aaa--------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- +>M94177.1/17200/1-7200 |Hepataitis E virus complete genome +--------------------------aggcagacca-catatg-------------t-----ggtcgatgc- +---catggaggcccatcagtttattaaggctcctggcatcactactgctattgag---caggctgctctagc +agcggccaactctgcccttgcgaatgctgtggtagttaggccttttctctctcaccagcagattgagatcct +tattaacctaatgcaacctcgccagcttgttttccgccccgaggttttctggaaccatcccatccagcgtgt +tatccataatgagctggagcttta---ctgtcgcgccc-gttccggccgctgccttgaaattggtgcccacc +cccgctcaataaatgataaccctaatgtggtccaccgctgcttcctccgccctgccgggcgtgatgttcagc +gttggtatactgcccctacccgcgggccggctgctaattgccggcgttccgcactgcgcgggctccccgctg +ctgaccgcacttactgcttcgacgggttttctggctgtaactttcccgccgagactggcgtcgccctctatt +ctctccatgatatgtcaccatctgatgtcgccgaggctatgttccgccatggtatgacgcggctttacgctg +ccctccacctc-ccgcctgaggtcctgttgccccctggcacataccgcaccgcgtcgtacttgctgatccat +gacggcaggcgcgttgtggtgacgtatgagggtgacactagtgctggttataaccacgatgtttccaacctg +cgctcctggattagaaccactaaggttaccggagaccatcctctcgtcattgagcgggttagggccattggc +tgccactttgtcctcttactcacggcagccccggagccatcacctacgccctatgttccttacccccggtct +accgaggtctatgtccgatcg-tcttcggcccgggt---------ggtaccccctccctatttccaacctca +t----------gctccactaagtcgacccttccatgctgtccctgcccatatctgggaccgtctcatgttgt +tcggggccaccctagatgaccaagccttttgctgctcccgcctaatgacttacctccgtggcattagctaca +aggttactgtgggcacccttgttgccaatgaaggctggaacgcctctgaggtcgctcttacagctgtcatca +ctgccgcctaccttaccatctgccaccagcggtacctccgcactcaggctatatctaaggggatgcgccgtc +tggagcgggagcatgctcagaagtttataacacgcctctacagttggctctttgagaagtc---------cg +gccgtgattatatccccggccgtcagttggagttctacgctcagtgtaggcgctggctctcggccggctttc +atcttgacccacgggtgttggtttttgatgagtcggccccctgc---cactgtaggactgcgattcgtaa-- +----ggcggtctcaaagttttgctgttttatgaagtggctgggccagga------gtgcacctgtttcctac +----------------aacctgcagaaggcgccgtcggcgaccagggc--------catgacaacgaggcct +atgaggggtctgatgtcgaccccgctgaatccgctattagtgacatatctgggtcctacgtcgtccctggca +ctgccctccaaccgctttaccaagcccttgacctccccgctgagattgtggctcgtgcaggccggctgaccg +ccacagtaaaggtctcccaggtcgacgggcggatcgattgtgagacccttctcggtaataaaaccttccgca +cgtcgtttgttgacggggcggttttagagactaatggccc------------------------agagcgcc +acaatctctcttttgatgccagtcagagcactatggccgccggccctttcagtctcacctatgccgcctctg +ctgctgggctggaggtgcgctatgtcgct-------gccgggcttgaccaccgggcggtttttgcc---ccc +ggcgtttcaccccggtcagcccctggcgaggtcaccgccttttgttctgccctatacaggtttaatcgcgag +gcccagcgcctttcgctcaccggtaatttttggttccatcctgaggggctccttggcccctttgccccgttt +tcccccgggcatgtttgggagtcggctaatccattctgtggagagagcacactttacacccgcacttggtcg +gaggttgatgctgtttctagtccagcccagcccgacttaggttttatatctgagccttctatacctagtagg +gccgccac----------------------------acttac-----------cccggcggc---------- +---------ccctctaccc----ccccctgcac--------------cggatccttcccctactccctctgc +tccgg------------------------------------------------------------------- +-------------------------------------------------------------cgc-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------gtggtgagccggct------cctggc +gctaccgc-----------------ccg------------------------ggccccggccataacccacc +agg----------------------------------------------cggcccggcatcgccgcc----- +-------------------tgctctttacctacccggatggctctaaggtattcgccggctcgctgtttgag +tcgacatgtacctggctcgttaacgcgtctaatgttgaccaccgccctggcggtgggctctgtcatgcattt +taccaaaggtaccccgcatcct------ttgatgctgcctcttttgtgatgcgcgacgg---cgcggccgcc +tatacattaaccccccggccaataattcacgccgtcgctcctgattataggttggaacataacccaaagatg +cttgaggctgcctaccgggagacttgctcccgcctcggtaccgctgcatacccactcctcgggaccggcata +taccaggtgccgatcggtcccagttttgacgcctgggagcggaatcaccgccccggggatgagttgtacctt +cctgagcttgctgccaga-------------------------------------------------tggtt +cgaggccaataggccgacctg--------------------------------------------------- +------------------------------------------cccaactctcactataactgaggatgttgc +ac------------ggacagcaaatctggctatcgaacttg------------actcagccacagacgtcgg +ccgggcctgt---gccggctgtcgagtcacccccggcgttgtgcagtaccagtttaccgcaggtgtgcctgg +atccggcaagtcccgctctattacccaagccgacgtggacgttgtcgtggtcccgacccgtgagttgcgtaa +tgcctggcgccgccgcggcttcgctgctttcaccccgcacactgccgccagagtcacccaggggcgccgggt +tgtcattgatgaggccccgtcccttccccctcacttgctgctgctccacatgcagcgggccgccaccgtcca +ccttcttggtgacccgaatcagatcccagccatcgactttgagcacgccgggctcgttcccgccatcaggcc +cgatttggcccccacctcctggtggcatgtgacccatcgctgccctgcggatgtatgtgagctgatccgtgg +cgcataccctatgattcagaccactagtcgggtcctccggtcgttgttctggggtgag------cctgctgt +tgggcagaaactagtgttcacccaggcagctaaggccgccaaccccggttcagtgacggtccatgaggcaca +gggcgctacctacacagagactaccattattgccacggcagatgctcgaggcctcattcagtcgtcccgagc +tcatgccattgttgccttgacgcgccacactgagaagtgcgtcatcattgacgcaccaggcctgcttcgcga +ggtgggcatctccgatgcaatcgttaataacttt------------------------------ttccttgc +tggtg--gcgaaattggccaccagcgcccatctgttatccctcgcggcaatcctgacgccaatgttgacac- +-----cttggctgccttcccgccgtcttgccagattagcgccttccatcagttggctgaggagcttggccac +agacctgcccctgtcgcggctgttctaccgccctgccctgagcttgaacagggccttctctacctgccccaa +gaactcaccacctgtgatagtgtcgtaacatttgaattaacagatattgtgcactgtcgtatggccgccccg +agccagcgcaaggccgtgctgtccacgcttgtgggccattacggccgccgcacaaagctctacaatgcctcc +cactctgatgttcgcgactctctcgcccgttttatcccggccattggccacgtacaggttacaacctgtgaa +ttgtacgagctagtggaggccatggtcgagaagggccaggacggctccgccgtccttgagctcgacctttgt +aaccgcgacgtgtccaggatcaccttcttccagaaagattgtaataaattcaccacgggggagaccatcgcc +catggtaaagtgggccagggcatttcggcctggagtaagaccttctgtgcccttttcggcccctggttccgt +gctattgagaaggctatcctggccctgctccctcagggtgtgttttatggggatgcctttgatgacaccgtc +ttctcggcggctgtggccgcagcaagggcatccatg---gtgtttgagaatgacttttctgagtttgattcc +acccagaataatttttcctt------------------gggcctagagtgtgctattatggtggagtgtggg +atgccgcagtggctcatccgcttgtaccaccttataaggtctgcgtggattctgcaggccccgaaggagtcc +ctgcgagggttttggaagaaacactccggtgagcccggcacccttctatggaatacagtctggaacatggcc +gttatcacccactgttatgatttccgcgatctgcaggtggccgcctttaaaggtgatgattcgatagtgctt +tgcagtgagtaccgtcagagcccaggggctgctgtcctgattgctggctgtggcctaaagttgaaggtggat +ttccgtccgattggtttgtatgcaggtgttgtggtggcccccggccttggcgcgcttcctgacgtcgtgcgc +ttcgccggccggcttactgagaagaattggggccctggccccgagcgggcgaagcagctccgcctcgctgtg +agtgattttctccgcaagctcacgaatgtagctcagatgtgtgtggatgttgtctctcgtg-------ttta +tggggtttcccctggactcgttcataacctgattggcatgctacaggctgttgctgacggcaaggctcattt +cactgagtcagtgaagccagtgctcgacctgacaaattcaatcctgtgtcgggtggaatgaataacatgtc- +t----------------tctgctgcgcccatgggt---------tcgcgaccatgcgccctcggcctatttt +gctgttgctcctcatgtttctgcctatgctgcccgcgc---------------------------------- +-caccgc------ccggtcagccgtctggcc------------gccgccgtgggcg-gcgcagcggcggttc +cggcggtg-gtttctggggtgaccgg--gctgattctcagcccttcg----caatcccctatattcat---- +--------------ccaaccaaccccttcgcccccgatgtcaccgctgcggccggggctggacctcgtgttc +gccaacccgcccg---------------accactcggctccgcttggcgtgaccaggccca----------- +------gcgccccgccgctgcctcacgtcgtagacctaccaca---------gctggggccgcgccgctaac +cgcggtcgctccggcccatgacaccccgccagtgcctgatgttgactcccgcggcgccatcctgcgccggca +gtataacctatcaacatctccccttacctcttccgtggccaccggtacaaacttggttctttacgccgctcc +tcttagcccgcttctacccctccaggacggcaccaatactcatataatggctacagaagcttctaattatgc +ccagtaccgggttgttcgtgctacaattcgctaccgcccgctggtccccaacgctgttggtggctacgccat +ctccatctcgttctggccacagaccaccaccaccccgacgtccgttgacatgaattcaataacctcgactga +tgttcgtattttagtccagcccggcatagcctccgagcatgttatcccaagtgagcgcctacactatcgtaa +ccaaggttggcgctctgttgagacctccggggtggcggaggaggaggccacctctggtcttgttatgctttg +catacatggctcactcgtaaactcttatactaatacaccttataccggtgccctcgggctgttggactttgc +cctcgaacttgagttccgcaacctcacccccggtaataccaacacgcgggtctcccgttactccagcactgc +ccgtcaccgccttcgtcgcggtgcagatgggactgccgagctcaccaccacggctgctacccgcttcatgaa +ggacctctatttta---ctagtactaat---ggtgtcggtgagatcggccgcgggatagcgcttaccctgtt +taaccttgctgacaccctgcttggcggtctaccgacagaattgatttcgtcggctggtggccagctgttcta +ctctcgccccgtcgtctcagccaatggcgagccgactgttaagctgtatacatctgtagagaatgctcagca +ggataagggtattgcaatcccgcatgacatcgacctcggggaatctcgtgtagttattcaggattatgataa +ccaacatgagcaggaccgaccgacaccttccccagccccatcgcgccccttttctgtcctccgagctaatga +tgtgctttggctttc-----------------------------tctcaccgctgccgagtatgac------ +cagtccacttacggctcttcgaccggcccagtctatgtctctgactctgtgaccttggt---taatgtagcg +accggcgcgcaggccgttgcccggtcgctcgactggaccaaggtcacacttgatggtcgccccctttccacc +ac-----ccagcagtattcaaagaccttctttgtcc-tgccgctccgcggtaagctctccttttgggaggca +ggtactactaaa--gccgggtacccttataattataacaccactgctagtgaccaactgctcgttgagaatg +ccgctgggcat------cgggttgctat-ttccacttacaccactagcctggg--------------tgctg +gccccgtctctatttc-cgcggttgctgttttagccccccactctgcgctagcattgcttgaggataccatg +gact---------accctgcccgcg----cccatactttcgatgacttctgcccggagtgccgccccc---t +tggcctccagggctgtgcttttcagtc--------tactgtcgctgagcttcagcgcct------------- +--------taagatgaaggtgggtaaaactcgggagttatagttta-ttt------gctt----------gt +gcccccct--------tc------tttctg------tt-----------------gcttatt-t-------c +tcatttct----gcg----------------ttccgcgctccctg---------------------aaaaaa +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------- diff --git a/primerschemes/hev/400/v1.0.0/work/amplicon.bed b/primerschemes/hev/400/v1.0.0/work/amplicon.bed new file mode 100644 index 0000000..0235887 --- /dev/null +++ b/primerschemes/hev/400/v1.0.0/work/amplicon.bed @@ -0,0 +1,21 @@ +NC_001434.1 81 519 576d3e45_0 1 +NC_001434.1 428 884 576d3e45_1 2 +NC_001434.1 779 1242 576d3e45_2 1 +NC_001434.1 1157 1624 576d3e45_3 2 +NC_001434.1 1539 1985 576d3e45_4 1 +NC_001434.1 1844 2300 576d3e45_5 2 +NC_001434.1 2089 2524 576d3e45_6 1 +NC_001434.1 2394 2854 576d3e45_7 2 +NC_001434.1 2727 3183 576d3e45_8 1 +NC_001434.1 3070 3506 576d3e45_9 2 +NC_001434.1 3434 3863 576d3e45_10 1 +NC_001434.1 3682 4149 576d3e45_11 2 +NC_001434.1 4053 4484 576d3e45_12 1 +NC_001434.1 4389 4851 576d3e45_13 2 +NC_001434.1 4649 5100 576d3e45_14 1 +NC_001434.1 4897 5311 576d3e45_15 2 +NC_001434.1 5233 5648 576d3e45_16 1 +NC_001434.1 5537 5998 576d3e45_17 2 +NC_001434.1 5926 6364 576d3e45_18 1 +NC_001434.1 6214 6613 576d3e45_19 2 +NC_001434.1 6498 6919 576d3e45_20 1 \ No newline at end of file diff --git a/primerschemes/hev/400/v1.0.0/work/config.json b/primerschemes/hev/400/v1.0.0/work/config.json new file mode 100644 index 0000000..8faa979 --- /dev/null +++ b/primerschemes/hev/400/v1.0.0/work/config.json @@ -0,0 +1,46 @@ +{ + "algorithmversion": "primalscheme3:1.1.4", + "amplicon_size_max": 440, + "amplicon_size_min": 360, + "backtrack": true, + "bedfile": false, + "circular": false, + "dimerscore": -26, + "disable_progress_bar": false, + "dna_conc": 15.0, + "dntp_conc": 0.8, + "dv_conc": 2.0, + "editdist_end3p": 6, + "editdist_max": 1, + "force": true, + "mapping": "first", + "min_overlap": 20, + "minbasefreq": 0.02, + "mismatch_fuzzy": true, + "mismatch_kmersize": 18, + "mismatch_product_size": 440, + "msa_data": { + "0": { + "msa_checksum": "ffa69df461751f92c5a68a22f05b569e", + "msa_chromname": "NC_001434.1", + "msa_name": "all_genomes.align.mod.ds.ref.align", + "msa_path": "work/all_genomes.align.mod.ds.ref.align.fasta", + "msa_uuid": "576d3e45" + } + }, + "mv_conc": 100.0, + "n_cores": 8, + "npools": 2, + "plot": true, + "primer_gc_max": 65.0, + "primer_gc_min": 30, + "primer_hairpin_th_max": 47.0, + "primer_homopolymer_max": 5, + "primer_max_walk": 80, + "primer_size_max": 36, + "primer_size_min": 18, + "primer_tm_max": 62.5, + "primer_tm_min": 59.5, + "primerclass": "primerschemes", + "reducekmers": false +} \ No newline at end of file diff --git a/primerschemes/hev/400/v1.0.0/work/file.log b/primerschemes/hev/400/v1.0.0/work/file.log new file mode 100644 index 0000000..de6155e --- /dev/null +++ b/primerschemes/hev/400/v1.0.0/work/file.log @@ -0,0 +1,16848 @@ +2024-02-28 at 17:47:31 | INFO | Creating the Mismatch Database +2024-02-28 at 17:47:38 | INFO | Created: hev-400-0.02/work/mismatch.db +2024-02-28 at 17:47:38 | WARNING | WARNING: Having a '/' in the chromname NC_001434.1/1-7176 will cause issues with figure generation bedfile output. Parsing chromname NC_001434.1/1-7176 -> NC_001434.1 +2024-02-28 at 17:47:38 | INFO | Read in MSA: all_genomes.align.mod.ds.ref.align seqs:325 cols:8427 +2024-02-28 at 17:47:53 | DEBUG | FKmer: 18: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 19: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 20: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 21 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 22 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 23 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 24 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 25 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 26 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 27 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 28 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 29 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 30 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 31 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 32 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 33: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 34: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 35: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 36: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 37: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 38: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 39: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 40: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 41: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 42: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 43 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 44: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 45: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 46: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 47: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 48: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 49: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 50: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 51: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 52 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 53 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 54 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 55 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 56 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 57 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 58 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 59 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 60 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 61 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 62 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 63 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 64 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 65 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 66 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 67 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 68 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 69 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 70 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 71 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 72 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 73 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 74 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 75 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 76 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 77 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 78 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 79 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 80 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 81 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 82 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 83 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 84 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 85 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 86 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 87 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 88 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 89 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 90 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 91 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 92 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 93 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 94 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 95 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 96 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 97 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 98 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 99 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 100 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 101 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 102 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 103 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 104 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 105 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 106 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 107 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 108: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 109: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 110: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 111: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 112: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 113: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 114 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 115 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 116 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 117 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 118 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 119 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 120 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 121 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 122 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 123 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 124: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 125: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 126: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 127: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 128: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 129: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 130: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 131: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 132: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 133: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 134: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 135 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 136: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 137: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 138: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 139: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 140: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 141: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 142: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 143 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 144: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 145 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 146: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 147: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 148: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 149: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 150: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 151: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 152: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 153: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 154: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 155: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 156: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 157: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 158: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 159: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 160: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 161: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 162 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 163 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 164: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 165: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 166: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 167: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 168: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 169: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 170 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 171 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 172 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 173 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 174 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 175 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 176 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 177 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 178 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 179 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 180 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 181: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 182 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 183 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 184 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 185 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 186 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 187 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 188 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 189 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 190 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 191 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 192 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 193 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 194 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 195: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 196 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 197 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 198 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 199 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 200 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 201 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 202 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 203 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 204 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 205 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 206 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 207 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 208 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 209 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 210 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 211 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 212 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 213 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 214 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 215 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 216 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 217 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 218 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 219 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 220 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 221 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 222 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 223 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 224 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 225 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 226 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 227 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 228 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 229 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 230 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 231 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 232: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 233 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 234 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 235 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 236 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 237 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 238 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 239 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 240 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 241 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 242 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 243 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 244 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 245 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 246 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 247 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 248 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 249 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 250 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 251 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 252 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 253 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 254 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 255 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 256 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 257 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 258 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 259 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 260 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 261 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 262 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 263 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 264 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 265 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 266 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 267 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 268 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 269 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 270 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 271 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 272 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 273 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 274 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 275 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 276 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 277 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 278 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 279 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 280 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 281 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 282 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 283 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 284 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 285 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 286 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 287 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 288 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 289 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 290 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 291 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 292 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 293 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 294 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 295 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 296 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 297 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 298 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 299 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 300 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 301 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 302 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 303 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 304 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 305 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 306 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 307 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 308: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 309: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 310: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 311: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 312: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 313: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 314: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 315: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 316: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 317: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 318: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 319: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 320: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 321: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 322: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 323: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 324: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 325: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 326 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 327: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 328: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 329 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 330 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 331 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 332 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 333 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 334 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 335 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 336 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 337 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 338 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 339 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 340 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 341 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 342 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 343 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 344 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 345 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 346 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 347 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 348 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 349 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 350 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 351 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 352 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 353 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 354 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 355 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 356 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 357 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 358 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 359 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 360 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 361: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 362 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 363 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 364 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 365 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 366 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 367 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 368 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 369 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 370 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 371 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 372 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 373 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 374 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 375 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 376 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 377 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 378 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 379 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 380 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 381 HighTM +2024-02-28 at 17:47:53 | DEBUG | FKmer: 382 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 383 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 384 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 385 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 386 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 387 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 388 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 389 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 390 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 391 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 392 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 393 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 394 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 395 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 396 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 397 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 398 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 399 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 400 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 401 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 402 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 403 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 404 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 405 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 406 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 407 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 408 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 409 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 410 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 411 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 412 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 413 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 414 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 415 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 416 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 417 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 418 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 419 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 420 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 421 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 422 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 423 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 424 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 425 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 426 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 427 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 428 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 429 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 430 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 431 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 432 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 433 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 434 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 435 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 436 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 437 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 438 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 439 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 440 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 441 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 442 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 443 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 444 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 445 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 446 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 447 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 448 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 449 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 450 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 451 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 452 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 453 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 454 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 455 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 456 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 457 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 458 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 459 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 460 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 461 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 462 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 463 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 464 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 465 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 466 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 467: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 468 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 469 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 470 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 471 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 472 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 473 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 474 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 475 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 476 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 477 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 478 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 479 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 480 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 481 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 482 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 483 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 484 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 485 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 486 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 487 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 488 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 489 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 490 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 491 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 492 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 493 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 494 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 495 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 496 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 497 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 498 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 499 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 500 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 501 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 502 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 503 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 504 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 505: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 506: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 507: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 508: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 509: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 510: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 511: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 512: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 513: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 514: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 515: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 516: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 517: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 518: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 519: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 520: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 521: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 522: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 523: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 524: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 525: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 526: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 527: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 528 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 529 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 530 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 531 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 532 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 533 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 534 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 535 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 536 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 537 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 538 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 539 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 540 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 541 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 542 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 543 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 544 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 545 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 546 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 547 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 548 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 549 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 550 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 551 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 552 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 553 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 554 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 555 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 556 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 557 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 558 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 559 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 560 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 561 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 562 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 563 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 564 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 565 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 566 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 567 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 568 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 569 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 570 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 571 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 572 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 573 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 574 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 575 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 576 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 577 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 578 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 579 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 580 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 581 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 582 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 583 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 584 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 585 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 586 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 587 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 588 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 589: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 590 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 591: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 592: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 593 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 594 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 595 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 596 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 597 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 598 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 599 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 600 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 601 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 602 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 603 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 604 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 605 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 606 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 607 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 608 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 609 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 610 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 611 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 612 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 613 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 614 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 615 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 616 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 617 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 618 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 619 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 620 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 621 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 622 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 623 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 624 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 625 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 626 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 627 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 628 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 629 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 630 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 631 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 632 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 633 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 634 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 635 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 636 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 637 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 638 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 639 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 640 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 641 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 642 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 643 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 644 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 645: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 646: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 647: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 648: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 649: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 650: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 651: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 652: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 653 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 654: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 655: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 656: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 657: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 658: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 659 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 660 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 661 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 662 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 663 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 664 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 665 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 666 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 667 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 668 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 669 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 670 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 671 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 672 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 673 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 674 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 675 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 676 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 677 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 678 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 679 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 680 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 681 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 682 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 683 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 684 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 685 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 686 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 687 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 688 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 689 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 690 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 691 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 692 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 693 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 694 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 695 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 696 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 697 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 698 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 699 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 700 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 701 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 702 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 703 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 704 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 705 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 706 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 707 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 708 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 709 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 710 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 711 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 712 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 713 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 714 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 715 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 716 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 717 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 718 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 719 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 720 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 721 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 722 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 723 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 724 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 725 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 726 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 727 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 728 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 729 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 730 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 731 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 732 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 733 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 734 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 735 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 736 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 737 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 738 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 739 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 740 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 741 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 742 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 743 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 744 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 745 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 746 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 747 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 748 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 749 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 750 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 751 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 752 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 753 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 754 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 755 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 756 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 757 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 758 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 759 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 760 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 761 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 762 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 763 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 764 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 765 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 766 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 767 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 768 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 769 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 770 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 771 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 772 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 773 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 774 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 775 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 776 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 777 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 778 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 779 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 780 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 781 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 782 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 783 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 784 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 785 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 786 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 787 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 788 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 789 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 790 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 791 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 792 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 793 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 794 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 795 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 796 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 797 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 798 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 799 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 800 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 801 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 802 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 803 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 804 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 805 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 806 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 807 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 808 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 809 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 810 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 811 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 812 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 813 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 814: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 815: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 816: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 817: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 818: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 819: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 820: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 821 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 822 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 823 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 824 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 825 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 826 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 827 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 828 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 829 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 830 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 831 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 832 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 833 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 834 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 835 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 836 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 837 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 838 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 839 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 840 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 841 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 842 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 843 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 844 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 845 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 846 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 847: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 848: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 849: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 850: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 851: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 852: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 853: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 854: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 855: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 856: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 857: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 858: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 859: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 860: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 861: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 862: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 863: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 864: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 865: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 866: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 867 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 868 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 869 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 870 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 871 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 872 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 873 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 874 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 875 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 876 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 877 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 878 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 879 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 880 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 881 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 882 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 883 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 884 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 885 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 886 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 887: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 888 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 889 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 890 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 891 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 892 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 893: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 894: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 895: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 896 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 897 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 898 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 899 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 900 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 901 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 902 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 903 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 904 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 905 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 906 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 907 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 908 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 909 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 910 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 911 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 912 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 913 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 914 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 915 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 916 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 917 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 918 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 919 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 920 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 921 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 922 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 923 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 924 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 925 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 926 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 927 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 928 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 929 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 930 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 931 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 932 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 933: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 934: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 935: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 936: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 937: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 938: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 939: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 940 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 941 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 942 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 943 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 944 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 945 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 946 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 947 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 948 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 949 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 950: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 951: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 952: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 953: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 954: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 955: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 956: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 957: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 958 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 959: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 960: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 961: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 962: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 963: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 964: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 965 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 966: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 967 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 968: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 969: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 970: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 971: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 972: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 973 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 974 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 975 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 976 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 977 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 978 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 979 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 980 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 981 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 982 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 983 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 984 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 985 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 986 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 987 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 988 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 989 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 990 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 991 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 992 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 993 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 994 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 995 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 996 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 997 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 998 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 999 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1000 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1001 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1002 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1003 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1004 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1005 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1006 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1007: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1008 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1009 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1010 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1011: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1012: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1013: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1014: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1015: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1016 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1017 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1018 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1019 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1020 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1021 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1022: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1023 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1024 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1025: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1026 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1027 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1028: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1029 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1030 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1031: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1032 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1033 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1034: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1035 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1036 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1037 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1038 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1039 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1040 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1041 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1042 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1043: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1044: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1045: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1046 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1047 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1048 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1049 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1050 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1051 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1052 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1053 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1054 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1055 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1056 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1057 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1058 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1059 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1060 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1061 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1062 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1063 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1064 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1065: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1066: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1067: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1068: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1069: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1070 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1071 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1072 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1073 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1074 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1075: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1076 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1077 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1078 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1079 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1080 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1081 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1082: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1083: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1084: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1085: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1086: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1087: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1088: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1089: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1090: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1091 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1092: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1093 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1094: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1095: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1096: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1097: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1098: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1099: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1100 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1101 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1102 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1103 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1104 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1105 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1106: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1107 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1108 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1109 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1110 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1111 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1112 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1113 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1114 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1115 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1116 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1117 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1118 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1119 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1120 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1121 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1122 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1123 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1124 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1125 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1126 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1127 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1128 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1129 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1130 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1131 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1132 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1133 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1134 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1135 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1136 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1137 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1138 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1139 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1140 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1141 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1142 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1143 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1144 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1145 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1146 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1147 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1148 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1149 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1150 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1151 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1152 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1153 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1154 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1155 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1156 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1157 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1158 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1159 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1160 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1161 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1162 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1163 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1164 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1165 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1166 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1167 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1168 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1169 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1170 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1171 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1172: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1173: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1174: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1175: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1176: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1177: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1178: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1179: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1180 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1181 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1182 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1183 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1184 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1185 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1186 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1187 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1188 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1189 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1190 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1191 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1192 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1193 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1194 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1195 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1196 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1197 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1198 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1199 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1200 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1201 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1202 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1203 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1204 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1205 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1206 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1207: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1208: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1209: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1210: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1211: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1212 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1213 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1214 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1215: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1216: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1217 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1218 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1219 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1220 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1221 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1222 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1223 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1224 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1225 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1226 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1227 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1228 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1229 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1230 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1231 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1232 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1233 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1234 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1235 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1236 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1237 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1238 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1239 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1240 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1241 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1242 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1243 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1244 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1245 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1246 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1247 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1248 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1249 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1250 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1251 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1252 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1253 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1254 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1255 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1256 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1257 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1258 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1259 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1260 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1261 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1262 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1263 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1264: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1265: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1266: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1267: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1268: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1269: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1270 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1271 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1272 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1273 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1274 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1275 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1276 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1277 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1278 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1279 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1280 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1281 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1282 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1283 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1284 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1285 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1286 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1287 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1288 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1289 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1290 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1291 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1292 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1293 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1294 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1295 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1296 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1297 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1298 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1299 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1300: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1301 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1302 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1303 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1304: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1305 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1306 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1307 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1308 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1309 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1310 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1311 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1312 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1313 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1314 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1315 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1316 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1317 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1318 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1319 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1320 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1321 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1322 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1323 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1324 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1325 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1326 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1327 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1328 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1329 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1330 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1331 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1332 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1333 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1334 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1335 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1336: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1337: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1338: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1339: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1340: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1341: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1342 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1343: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1344: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1345: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1346 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1347: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1348 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1349 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1350 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1351 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1352 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1353 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1354 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1355 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1356 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1357 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1358 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1359 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1360 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1361 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1362 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1363 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1364 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1365 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1366 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1367 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1368 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1369 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1370 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1371 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1372 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1373: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1374: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1375: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1376 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1377 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1378 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1379 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1380 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1381 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1382 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1383 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1384 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1385 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1386 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1387 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1388 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1389 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1390 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1391 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1392 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1393 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1394 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1395 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1396 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1397 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1398 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1399 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1400 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1401 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1402 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1403 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1404 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1405 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1406 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1407 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1408 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1409 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1410 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1411: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1412 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1413 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1414 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1415 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1416 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1417 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1418 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1419 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1420 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1421 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1422 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1423 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1424 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1425 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1426 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1427 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1428 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1429 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1430 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1431 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1432 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1433 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1434 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1435 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1436 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1437 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1438 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1439 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1440 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1441 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1442 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1443 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1444 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1445 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1446 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1447 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1448 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1449 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1450 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1451 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1452 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1453 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1454 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1455 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1456 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1457 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1458 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1459 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1460 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1461 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1462 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1463 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1464 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1465: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1466 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1467 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1468 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1469: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1470: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1471: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1472: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1473: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1474: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1475: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1476: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1477: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1478: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1479 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1480 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1481 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1482: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1483 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1484: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1485: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1486: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1487 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1488: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1489 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1490 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1491 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1492 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1493 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1494 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1495 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1496 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1497 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1498 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1499 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1500 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1501 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1502 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1503 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1504 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1505 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1506 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1507 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1508 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1509 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1510 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1511 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1512 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1513 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1514 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1515 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1516 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1517 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1518 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1519 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1520 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1521 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1522 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1523 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1524 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1525 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1526 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1527 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1528 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1529 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1530 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1531 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1532 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1533 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1534 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1535 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1536 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1537 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1538 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1539 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1540 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1541 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1542 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1543 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1544 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1545 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1546 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1547 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1548 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1549 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1550 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1551 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1552 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1553 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1554 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1555 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1556 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1557 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1558 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1559 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1560 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1561 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1562 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1563 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1564 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1565 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1566 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1567 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1568 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1569 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1570 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1571 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1572 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1573 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1574 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1575 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1576 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1577 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1578 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1579 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1580 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1581: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1582: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1583: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1584: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1585 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1586 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1587 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1588 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1589 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1590 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1591 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1592 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1593 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1594 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1595 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1596 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1597 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1598 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1599 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1600 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1601 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1602 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1603 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1604 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1605 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1606 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1607 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1608 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1609 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1610 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1611 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1612 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1613 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1614 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1615 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1616 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1617 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1618 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1619 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1620 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1621 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1622 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1623 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1624 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1625 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1626 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1627 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1628 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1629 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1630 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1631 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1632 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1633 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1634: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1635: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1636: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1637: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1638: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1639: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1640: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1641: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1642: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1643: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1644: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1645: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1646: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1647: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1648: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1649: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1650: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1651 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1652 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1653 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1654 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1655 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1656 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1657 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1658 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1659 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1660 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1661 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1662 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1663 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1664 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1665 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1666 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1667 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1668 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1669 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1670 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1671 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1672 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1673 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1674 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1675 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1676 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1677 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1678 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1679 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1680 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1681 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1682 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1683 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1684 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1685 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1686 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1687 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1688 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1689 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1690 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1691 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1692 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1693 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1694 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1695 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1696 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1697 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1698 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1699 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1700 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1701 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1702 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1703 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1704: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1705 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1706 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1707 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1708 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1709 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1710: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1711 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1712 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1713 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1714 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1715 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1716 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1717 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1718 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1719 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1720 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1721 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1722 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1723 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1724 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1725 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1726 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1727 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1728 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1729 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1730 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1731 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1732 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1733 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1734 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1735 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1736 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1737 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1738 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1739 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1740 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1741 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1742 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1743 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1744 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1745 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1746 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1747 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1748 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1749 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1750 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1751 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1752 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1753 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1754 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1755 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1756 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1757 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1758 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1759 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1760 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1761 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1762 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1763 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1764 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1765 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1766 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1767 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1768 HighTM +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1769 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1770 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1771 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1772 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1773 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1774 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1775 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1776 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1777 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1778 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1779 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1780 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1781 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1782 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1783 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1784 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1785 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1786 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1787 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1788 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1789 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1790 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1791 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1792 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1793 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1794 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1795 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1796 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1797 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1798 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1799 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1800 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1801 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1802 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1803 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1804 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1805 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1806: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1807: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1808: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1809 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1810 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1811 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1812 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1813 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1814 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1815 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1816 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1817 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1818 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1819 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1820 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1821 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1822 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1823 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1824 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1825 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1826 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1827 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1828 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1829 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1830 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1831 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1832 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1833 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1834 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1835 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1836 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1837 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1838 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1839 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1840 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1841 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1842 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1843 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1844 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1845 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1846 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1847 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1848 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1849 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1850 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1851 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1852 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1853 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1854 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1855 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1856 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1857 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1858 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1859 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1860 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1861 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1862 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1863 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1864 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1865 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1866 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1867: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1868 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1869 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1870 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1871 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1872 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1873 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1874 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1875 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1876 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1877 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1878 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1879 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1880 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1881 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1882 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1883 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1884 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1885 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1886: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1887: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1888: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1889: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1890: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1891: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1892: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1893 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1894 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1895 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1896: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1897: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1898: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1899: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1900: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1901 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1902 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1903 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1904 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1905 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1906 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1907 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1908 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1909: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1910 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1911 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1912 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1913 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1914 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1915 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1916 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1917 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1918 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1919 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1920 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1921 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1922 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1923 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1924 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1925 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1926 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1927 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1928 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1929 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1930 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1931 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1932 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1933 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1934 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1935 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1936 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1937 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1938 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1939 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1940 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1941 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1942 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1943 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1944 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1945 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1946 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1947 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1948 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1949 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1950 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1951: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1952: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1953 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1954 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1955 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1956 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1957 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1958 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1959 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1960 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1961 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1962 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1963 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1964 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1965 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1966 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1967 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1968 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1969 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1970 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1971 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1972 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1973 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1974 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1975: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1976 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1977 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1978 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1979 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1980 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1981 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1982 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1983: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1984: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1985: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1986: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1987: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1988 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1989 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1990 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1991 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1992 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1993: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1994: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1995 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1996 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1997 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1998 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 1999 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2000 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2001 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2002 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2003 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2004 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2005 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2006 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2007 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2008 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2009 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2010 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2011 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2012 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2013 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2014 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2015 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2016 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2017 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2018 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2019 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2020 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2021 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2022 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2023 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2024 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2025 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2026 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2027 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2028 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2029 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2030 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2031 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2032 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2033 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2034 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2035 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2036 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2037 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2038 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2039 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2040 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2041 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2042 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2043 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2044 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2045 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2046 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2047 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2048 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2049 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2050 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2051 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2052 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2053 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2054 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2055 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2056 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2057 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2058 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2059 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2060 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2061 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2062 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2063 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2064: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2065 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2066 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2067 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2068 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2069 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2070 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2071 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2072 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2073: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2074: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2075: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2076: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2077: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2078 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2079 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2080 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2081 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2082 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2083 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2084: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2085 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2086: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2087 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2088 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2089 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2090 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2091: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2092: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2093: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2094 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2095 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2096 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2097 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2098 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2099 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2100 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2101 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2102 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2103 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2104 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2105 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2106 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2107 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2108 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2109 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2110 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2111 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2112 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2113 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2114 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2115 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2116 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2117 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2118 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2119 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2120 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2121 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2122 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2123 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2124 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2125 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2126 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2127 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2128 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2129 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2130 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2131 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2132 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2133 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2134 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2135 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2136 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2137 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2138 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2139 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2140 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2141 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2142 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2143 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2144 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2145 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2146 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2147 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2148 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2149 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2150 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2151 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2152 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2153 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2154 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2155 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2156 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2157 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2158 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2159 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2160 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2161 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2162 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2163 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2164 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2165 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2166 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2167 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2168 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2169 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2170 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2171 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2172 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2173 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2174 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2175 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2176 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2177 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2178 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2179 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2180 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2181 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2182 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2183 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2184 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2185 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2186 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2187 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2188 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2189 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2190 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2191: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2192: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2193: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2194: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2195 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2196 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2197 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2198 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2199 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2200 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2201 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2202 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2203 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2204 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2205 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2206 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2207 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2208 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2209 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2210 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2211 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2212 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2213 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2214 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2215 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2216 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2217 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2218 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2219 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2220 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2221 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2222 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2223 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2224 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2225 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2226 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2227 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2228 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2229: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2230: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2231: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2232: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2233: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2234: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2235: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2236: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2237: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2238: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2239: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2240: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2241: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2242: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2243: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2244: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2245: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2246: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2247 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2248 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2249 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2250: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2251: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2252: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2253: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2254 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2255 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2256 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2257 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2258 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2259 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2260 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2261 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2262 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2263: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2264: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2265: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2266 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2267 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2268 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2269 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2270 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2271 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2272 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2273 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2274 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2275 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2276 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2277 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2278 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2279 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2280 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2281 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2282 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2283 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2284 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2285 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2286 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2287 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2288 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2289 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2290 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2291 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2292 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2293 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2294 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2295 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2296 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2297 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2298 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2299 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2300 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2301 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2302 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2303 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2304 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2305 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2306 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2307 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2308 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2309 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2310 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2311 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2312: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2313: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2314 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2315 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2316 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2317 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2318 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2319 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2320 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2321 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2322 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2323 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2324 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2325 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2326 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2327 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2328 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2329 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2330 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2331 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2332 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2333 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2334 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2335 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2336 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2337 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2338 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2339 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2340 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2341 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2342 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2343 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2344 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2345 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2346 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2347 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2348 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2349 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2350 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2351 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2352 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2353 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2354 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2355 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2356 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2357 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2358 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2359 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2360: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2361 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2362: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2363: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2364: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2365: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2366: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2367: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2368: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2369 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2370 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2371 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2372 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2373 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2374 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2375 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2376 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2377 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2378 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2379 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2380 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2381 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2382 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2383 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2384 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2385 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2386 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2387 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2388 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2389: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2390: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2391 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2392: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2393: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2394 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2395 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2396 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2397 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2398 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2399 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2400 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2401 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2402 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2403 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2404 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2405 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2406 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2407 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2408 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2409 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2410 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2411 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2412 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2413 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2414 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2415 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2416 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2417 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2418 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2419 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2420 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2421 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2422 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2423 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2424 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2425 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2426 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2427 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2428 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2429 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2430 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2431 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2432 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2433 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2434 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2435 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2436 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2437 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2438 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2439 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2440 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2441 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2442 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2443 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2444: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2445: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2446 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2447 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2448 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2449 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2450 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2451 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2452 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2453 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2454 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2455 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2456 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2457 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2458 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2459 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2460 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2461 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2462 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2463 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2464 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2465 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2466 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2467 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2468 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2469 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2470 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2471 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2472 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2473 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2474 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2475 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2476 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2477 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2478 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2479 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2480 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2481 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2482 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2483 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2484 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2485 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2486 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2487 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2488 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2489 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2490 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2491 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2492 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2493 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2494 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2495 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2496 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2497 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2498 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2499 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2500 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2501 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2502 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2503 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2504 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2505 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2506 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2507 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2508 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2509 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2510 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2511 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2512 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2513 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2514 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2515 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2516 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2517 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2518 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2519 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2520 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2521 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2522 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2523 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2524 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2525 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2526 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2527 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2528 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2529 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2530 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2531 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2532 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2533 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2534 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2535 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2536 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2537 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2538 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2539 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2540 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2541 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2542 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2543 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2544 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2545 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2546 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2547 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2548 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2549 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2550 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2551 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2552 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2553 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2554 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2555 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2556 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2557 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2558 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2559 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2560 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2561 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2562 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2563 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2564 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2565 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2566 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2567 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2568 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2569 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2570 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2571 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2572 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2573 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2574 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2575 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2576 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2577 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2578 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2579 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2580 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2581 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2582 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2583 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2584 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2585 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2586 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2587 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2588 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2589 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2590 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2591 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2592 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2593 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2594 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2595 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2596 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2597 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2598 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2599 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2600 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2601 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2602 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2603 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2604 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2605 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2606 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2607 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2608 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2609 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2610 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2611 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2612 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2613 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2614 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2615 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2616 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2617 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2618 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2619 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2620 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2621 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2622 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2623 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2624 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2625 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2626 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2627 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2628 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2629 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2630 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2631 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2632 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2633 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2634 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2635 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2636 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2637 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2638 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2639 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2640 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2641 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2642 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2643 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2644 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2645 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2646 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2647 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2648 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2649 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2650 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2651 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2652 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2653 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2654 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2655 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2656 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2657 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2658 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2659 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2660 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2661 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2662 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2663 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2664 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2665 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2666 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2667 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2668 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2669 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2670 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2671 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2672 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2673 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2674 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2675 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2676 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2677 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2678 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2679 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2680 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2681 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2682 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2683 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2684 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2685 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2686 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2687 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2688 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2689 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2690 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2691 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2692 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2693 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2694 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2695 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2696 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2697 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2698 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2699 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2700 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2701 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2702 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2703 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2704 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2705 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2706 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2707 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2708 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2709 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2710 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2711 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2712 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2713 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2714 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2715 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2716 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2717 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2718 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2719 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2720 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2721 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2722 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2723 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2724 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2725 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2726 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2727 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2728 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2729 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2730 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2731 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2732 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2733 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2734 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2735 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2736 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2737 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2738 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2739 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2740 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2741 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2742 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2743 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2744 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2745 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2746 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2747 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2748 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2749 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2750 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2751 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2752 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2753 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2754 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2755 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2756 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2757 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2758 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2759 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2760 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2761 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2762 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2763 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2764 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2765 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2766 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2767 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2768 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2769 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2770 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2771 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2772 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2773 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2774 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2775 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2776 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2777 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2778 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2779 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2780 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2781 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2782 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2783 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2784 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2785 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2786 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2787 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2788 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2789 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2790 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2791 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2792 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2793 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2794 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2795 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2796 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2797 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2798 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2799 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2800 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2801 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2802 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2803 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2804 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2805 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2806 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2807 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2808 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2809 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2810 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2811 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2812: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2813: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2814: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2815: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2816: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2817: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2818: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2819 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2820 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2821 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2822 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2823 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2824 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2825 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2826 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2827 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2828 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2829 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2830 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2831 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2832 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2833 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2834 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2835 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2836 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2837 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2838 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2839 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2840 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2841 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2842 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2843 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2844 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2845 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2846 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2847 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2848 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2849 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2850 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2851 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2852 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2853 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2854 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2855 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2856 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2857 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2858 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2859 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2860 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2861 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2862 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2863 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2864 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2865 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2866 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2867 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2868 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2869 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2870 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2871 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2872 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2873 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2874 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2875 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2876 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2877 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2878 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2879 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2880 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2881 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2882 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2883 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2884 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2885 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2886 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2887 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2888 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2889 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2890 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2891 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2892 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2893 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2894 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2895 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2896 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2897 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2898 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2899 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2900 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2901 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2902 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2903 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2904 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2905 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2906 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2907 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2908 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2909 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2910 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2911 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2912 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2913 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2914 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2915 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2916 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2917 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2918 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2919 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2920 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2921 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2922 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2923 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2924 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2925 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2926 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2927 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2928 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2929 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2930 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2931 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2932 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2933 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2934 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2935 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2936 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2937 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2938 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2939 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2940 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2941 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2942 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2943 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2944 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2945 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2946 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2947 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2948 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2949 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2950 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2951 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2952 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2953 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2954 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2955 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2956 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2957 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2958 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2959 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2960 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2961 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2962 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2963 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2964 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2965 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2966 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2967 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2968 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2969 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2970 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2971 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2972 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2973 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2974 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2975 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2976 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2977 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2978 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2979 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2980 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2981 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2982 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2983 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2984 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2985 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2986: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2987: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2988: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2989: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2990: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2991: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2992: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2993 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2994 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2995 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2996 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2997 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2998 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 2999 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3000 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3001 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3002 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3003 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3004 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3005 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3006 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3007 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3008: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3009: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3010: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3011: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3012: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3013 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3014 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3015 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3016: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3017: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3018: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3019: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3020: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3021 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3022 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3023 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3024 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3025 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3026 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3027 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3028 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3029 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3030 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3031 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3032 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3033 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3034 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3035 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3036: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3037 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3038 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3039 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3040 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3041 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3042 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3043 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3044 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3045 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3046 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3047 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3048 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3049 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3050 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3051 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3052 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3053: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3054 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3055 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3056 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3057: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3058: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3059: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3060: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3061 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3062 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3063: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3064: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3065: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3066: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3067 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3068 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3069 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3070 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3071 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3072 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3073 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3074 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3075 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3076 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3077 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3078 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3079 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3080 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3081 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3082 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3083 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3084 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3085 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3086 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3087 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3088 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3089 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3090 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3091 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3092 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3093 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3094 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3095 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3096 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3097 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3098 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3099 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3100 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3101 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3102 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3103 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3104 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3105 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3106 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3107 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3108: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3109 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3110: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3111: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3112 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3113: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3114: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3115: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3116: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3117: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3118 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3119 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3120 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3121 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3122 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3123 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3124 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3125 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3126 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3127 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3128 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3129 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3130 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3131 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3132 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3133 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3134 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3135 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3136 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3137 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3138 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3139 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3140 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3141 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3142 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3143 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3144 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3145 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3146 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3147: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3148: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3149: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3150: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3151: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3152: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3153: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3154: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3155: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3156: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3157: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3158 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3159 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3160 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3161: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3162: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3163 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3164 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3165 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3166 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3167 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3168 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3169 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3170 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3171 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3172 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3173 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3174 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3175 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3176 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3177 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3178 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3179 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3180 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3181 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3182 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3183 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3184: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3185: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3186: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3187: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3188: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3189: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3190 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3191 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3192 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3193 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3194 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3195 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3196 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3197 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3198 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3199 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3200 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3201 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3202 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3203 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3204 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3205 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3206 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3207 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3208 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3209 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3210 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3211 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3212 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3213 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3214 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3215 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3216 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3217 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3218 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3219 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3220 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3221 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3222 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3223 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3224 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3225 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3226 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3227 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3228 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3229 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3230 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3231 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3232 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3233 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3234 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3235 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3236 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3237 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3238 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3239 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3240 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3241 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3242 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3243 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3244: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3245 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3246 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3247 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3248 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3249 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3250 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3251 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3252 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3253 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3254 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3255 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3256 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3257 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3258 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3259 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3260 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3261 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3262 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3263 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3264 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3265 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3266 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3267 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3268 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3269 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3270 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3271 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3272 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3273 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3274 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3275 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3276 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3277 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3278 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3279 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3280 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3281 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3282 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3283 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3284 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3285 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3286 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3287 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3288 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3289 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3290 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3291 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3292 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3293 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3294 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3295 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3296 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3297 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3298 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3299 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3300 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3301 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3302 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3303 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3304 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3305 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3306 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3307 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3308 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3309 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3310 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3311 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3312 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3313 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3314 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3315 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3316 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3317 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3318: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3319: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3320: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3321 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3322 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3323: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3324 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3325 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3326 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3327 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3328 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3329 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3330 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3331 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3332 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3333 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3334 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3335 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3336 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3337 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3338 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3339 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3340 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3341 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3342 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3343 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3344 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3345 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3346 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3347 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3348 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3349 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3350 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3351: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3352 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3353 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3354 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3355 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3356 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3357 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3358 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3359 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3360 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3361 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3362 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3363 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3364 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3365 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3366 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3367 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3368 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3369 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3370 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3371 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3372 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3373 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3374 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3375 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3376 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3377 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3378 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3379 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3380 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3381 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3382 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3383 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3384 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3385 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3386 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3387 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3388 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3389 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3390 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3391 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3392 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3393: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3394: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3395: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3396: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3397: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3398 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3399 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3400 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3401 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3402 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3403 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3404 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3405 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3406 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3407 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3408 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3409 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3410 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3411 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3412 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3413 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3414 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3415 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3416 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3417 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3418 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3419 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3420 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3421 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3422 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3423 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3424 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3425 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3426 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3427 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3428 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3429 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3430 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3431 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3432 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3433 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3434 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3435 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3436 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3437 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3438 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3439 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3440 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3441 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3442 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3443 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3444 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3445 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3446 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3447 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3448 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3449 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3450 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3451 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3452 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3453 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3454 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3455 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3456 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3457 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3458 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3459 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3460 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3461 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3462 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3463 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3464 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3465 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3466 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3467 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3468 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3469 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3470 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3471 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3472 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3473 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3474 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3475 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3476 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3477 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3478 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3479 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3480 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3481 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3482 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3483 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3484 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3485 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3486 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3487 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3488 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3489 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3490 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3491 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3492 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3493 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3494 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3495 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3496 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3497 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3498 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3499 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3500 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3501 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3502 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3503 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3504 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3505 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3506 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3507 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3508 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3509 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3510 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3511 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3512 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3513 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3514 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3515 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3516 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3517 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3518 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3519 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3520 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3521 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3522 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3523 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3524 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3525 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3526 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3527 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3528 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3529 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3530 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3531 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3532 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3533 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3534 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3535 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3536 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3537 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3538 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3539 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3540 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3541 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3542 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3543 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3544 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3545 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3546 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3547 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3548 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3549 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3550 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3551 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3552 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3553 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3554 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3555 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3556 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3557 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3558 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3559 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3560 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3561 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3562 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3563 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3564 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3565 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3566 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3567 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3568 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3569 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3570 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3571 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3572 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3573 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3574 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3575 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3576 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3577 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3578 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3579 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3580 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3581 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3582 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3583 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3584 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3585 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3586 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3587 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3588 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3589 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3590 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3591 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3592 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3593 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3594: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3595: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3596 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3597 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3598 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3599 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3600 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3601 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3602 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3603 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3604: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3605 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3606 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3607 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3608 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3609 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3610 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3611 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3612 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3613 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3614 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3615 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3616 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3617: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3618 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3619 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3620 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3621 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3622 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3623 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3624 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3625 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3626 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3627 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3628 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3629 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3630 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3631 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3632 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3633 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3634 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3635 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3636 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3637 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3638 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3639 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3640 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3641 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3642 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3643: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3644 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3645 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3646 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3647 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3648 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3649 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3650 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3651 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3652 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3653 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3654 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3655 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3656: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3657: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3658 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3659: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3660: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3661 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3662 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3663: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3664: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3665: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3666: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3667: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3668: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3669: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3670 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3671: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3672 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3673 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3674 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3675 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3676 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3677 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3678 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3679 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3680 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3681 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3682 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3683 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3684 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3685 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3686 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3687 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3688 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3689 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3690 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3691 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3692 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3693 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3694 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3695 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3696 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3697 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3698 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3699 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3700 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3701 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3702 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3703 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3704 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3705 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3706: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3707: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3708: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3709: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3710: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3711: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3712 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3713 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3714 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3715 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3716 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3717 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3718 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3719 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3720 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3721 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3722 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3723: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3724: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3725: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3726: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3727: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3728: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3729: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3730: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3731: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3732: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3733: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3734 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3735 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3736: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3737: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3738: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3739 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3740 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3741 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3742 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3743 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3744 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3745 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3746 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3747 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3748 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3749 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3750 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3751 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3752 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3753 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3754 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3755 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3756 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3757 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3758 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3759 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3760 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3761 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3762 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3763 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3764 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3765 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3766 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3767 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3768 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3769 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3770 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3771 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3772: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3773 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3774 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3775 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3776 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3777 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3778 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3779 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3780: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3781: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3782: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3783 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3784 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3785 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3786 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3787 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3788 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3789 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3790 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3791 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3792 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3793 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3794 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3795 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3796 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3797 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3798 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3799 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3800 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3801 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3802 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3803 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3804 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3805 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3806 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3807 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3808 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3809 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3810 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3811 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3812 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3813 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3814 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3815 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3816 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3817 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3818 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3819 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3820 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3821 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3822 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3823 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3824 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3825 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3826 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3827 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3828 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3829 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3830 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3831 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3832 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3833 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3834 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3835 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3836 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3837 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3838 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3839 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3840 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3841 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3842 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3843 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3844 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3845 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3846 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3847 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3848 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3849 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3850 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3851 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3852 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3853 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3854 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3855 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3856: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3857: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3858: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3859 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3860: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3861: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3862: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3863: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3864 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3865 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3866 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3867 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3868 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3869 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3870 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3871 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3872 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3873 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3874 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3875 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3876 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3877 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3878 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3879 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3880 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3881 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3882 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3883 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3884 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3885 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3886 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3887 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3888 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3889 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3890 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3891 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3892 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3893 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3894 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3895 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3896 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3897 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3898 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3899 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3900 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3901: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3902: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3903: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3904: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3905: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3906: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3907: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3908: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3909 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3910 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3911 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3912 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3913 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3914 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3915 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3916 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3917 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3918 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3919 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3920 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3921 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3922 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3923 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3924 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3925 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3926 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3927 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3928 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3929 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3930 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3931 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3932 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3933 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3934 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3935 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3936 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3937 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3938 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3939 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3940 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3941 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3942 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3943 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3944 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3945 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3946 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3947 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3948 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3949 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3950 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3951 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3952 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3953 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3954 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3955 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3956 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3957 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3958 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3959 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3960 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3961 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3962 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3963 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3964 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3965 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3966 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3967 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3968 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3969 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3970 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3971 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3972 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3973 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3974 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3975 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3976 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3977 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3978 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3979 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3980 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3981 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3982 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3983 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3984 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3985 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3986 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3987 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3988 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3989 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3990 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3991: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3992 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3993 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3994 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3995: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3996: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3997: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3998: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 3999: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4000: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4001: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4002: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4003: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4004: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4005: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4006: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4007: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4008: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4009: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4010: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4011 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4012: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4013: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4014 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4015 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4016 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4017 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4018 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4019 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4020 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4021 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4022 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4023 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4024 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4025 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4026 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4027 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4028 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4029 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4030 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4031 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4032 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4033 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4034 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4035 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4036 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4037 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4038 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4039 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4040 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4041 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4042 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4043 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4044 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4045 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4046 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4047 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4048 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4049 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4050 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4051 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4052 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4053 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4054 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4055 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4056 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4057 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4058 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4059 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4060 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4061 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4062 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4063 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4064 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4065 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4066 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4067 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4068 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4069 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4070 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4071 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4072 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4073 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4074 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4075 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4076 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4077 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4078 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4079 HighTM +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4080 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4081 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4082 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4083 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4084 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4085 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4086 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4087 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4088 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4089 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4090 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4091 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4092 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4093 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4094 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4095 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4096 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4097 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4098 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4099 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4100 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4101 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4102 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4103 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4104 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4105 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4106 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4107 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4108 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4109 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4110 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4111 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4112 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4113 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4114 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4115 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4116 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4117 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4118 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4119 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4120 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4121 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4122 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4123 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4124 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4125 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4126 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4127 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4128 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4129 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4130 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4131 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4132: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4133: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4134: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4135: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4136: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4137: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4138 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4139 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4140 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4141 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4142 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4143 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4144 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4145 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4146 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4147 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4148 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4149 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4150 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4151 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4152 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4153 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4154 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4155 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4156 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4157 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4158 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4159 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4160: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4161: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4162: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4163 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4164 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4165 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4166 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4167 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4168 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4169 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4170 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4171: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4172: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4173: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4174 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4175 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4176 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4177 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4178 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4179 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4180 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4181 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4182 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4183 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4184 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4185 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4186 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4187 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4188 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4189 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4190 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4191 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4192 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4193 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4194 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4195 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4196 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4197 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4198 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4199 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4200 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4201 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4202 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4203 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4204 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4205 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4206 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4207: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4208: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4209 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4210 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4211: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4212: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4213: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4214 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4215 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4216 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4217 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4218 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4219 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4220 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4221 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4222 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4223 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4224 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4225 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4226 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4227 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4228 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4229 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4230 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4231 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4232 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4233 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4234 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4235 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4236 HighTM +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4237 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4238 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4239 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4240 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4241 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4242 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4243 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4244 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4245 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4246 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4247 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4248: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4249: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4250: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4251: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4252 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4253 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4254 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4255 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4256 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4257 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4258 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4259 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4260 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4261 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4262 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4263 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4264 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4265 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4266 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4267 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4268 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4269 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4270 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4271: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4272: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4273: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4274: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4275: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4276: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4277: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4278: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4279: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4280: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4281: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4282: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4283: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4284: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4285: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4286: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4287: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4288: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4289: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4290: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4291 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4292 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4293 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4294 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4295 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4296 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4297 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4298 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4299 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4300 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4301 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4302 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4303 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4304 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4305 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4306 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4307 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4308 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4309 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4310 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4311 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4312 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4313 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4314 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4315 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4316: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4317: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4318: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4319: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4320: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4321: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4322 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4323: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4324: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4325 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4326: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4327: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4328: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4329 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4330 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4331 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4332 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4333 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4334 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4335 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4336 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4337 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4338 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4339 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4340 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4341 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4342: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4343 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4344 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4345: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4346: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4347: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4348 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4349 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4350 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4351 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4352 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4353 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4354 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4355 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4356 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4357 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4358 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4359 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4360 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4361 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4362 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4363 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4364 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4365 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4366 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4367 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4368 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4369: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4370: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4371: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4372: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4373: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4374: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4375 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4376 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4377 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4378 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4379 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4380 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4381 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4382 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4383 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4384 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4385 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4386 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4387 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4388 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4389 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4390 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4391 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4392 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4393 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4394 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4395 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4396 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4397 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4398 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4399 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4400 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4401 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4402 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4403 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4404 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4405 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4406 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4407 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4408 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4409 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4410 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4411 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4412: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4413 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4414 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4415 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4416 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4417 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4418 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4419 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4420: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4421: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4422: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4423 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4424 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4425 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4426 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4427 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4428 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4429 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4430 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4431 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4432 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4433 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4434 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4435 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4436 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4437 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4438 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4439 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4440 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4441 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4442 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4443 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4444 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4445 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4446 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4447 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4448 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4449 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4450 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4451 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4452 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4453 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4454 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4455 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4456 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4457 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4458 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4459: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4460 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4461 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4462 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4463 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4464 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4465 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4466 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4467 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4468 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4469 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4470 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4471 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4472 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4473 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4474 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4475 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4476 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4477 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4478 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4479 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4480 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4481 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4482 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4483 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4484 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4485 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4486 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4487 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4488 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4489 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4490 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4491 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4492 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4493 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4494 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4495 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4496 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4497 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4498 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4499 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4500 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4501 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4502 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4503 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4504 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4505: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4506: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4507: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4508: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4509 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4510 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4511 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4512 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4513 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4514 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4515 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4516 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4517 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4518 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4519 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4520 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4521 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4522 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4523 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4524 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4525 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4526 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4527 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4528 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4529 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4530: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4531: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4532: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4533: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4534: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4535: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4536: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4537 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4538 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4539 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4540 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4541 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4542 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4543 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4544: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4545: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4546: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4547: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4548: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4549: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4550: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4551: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4552: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4553: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4554 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4555 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4556: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4557: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4558: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4559: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4560: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4561: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4562 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4563 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4564: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4565: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4566 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4567 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4568 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4569 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4570 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4571 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4572 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4573 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4574 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4575 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4576 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4577 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4578: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4579: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4580: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4581 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4582: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4583: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4584: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4585: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4586: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4587: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4588 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4589 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4590 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4591 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4592 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4593 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4594 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4595 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4596 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4597 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4598 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4599 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4600 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4601 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4602 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4603 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4604 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4605 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4606 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4607 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4608 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4609 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4610 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4611 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4612 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4613 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4614 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4615 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4616 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4617 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4618 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4619 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4620 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4621 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4622 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4623 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4624 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4625 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4626 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4627 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4628 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4629 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4630 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4631 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4632 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4633 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4634 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4635 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4636 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4637 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4638 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4639 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4640 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4641 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4642 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4643 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4644 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4645 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4646 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4647 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4648 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4649 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4650 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4651 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4652 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4653 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4654 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4655 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4656 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4657 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4658 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4659 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4660 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4661 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4662 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4663 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4664 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4665 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4666 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4667 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4668 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4669 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4670 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4671 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4672 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4673 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4674 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4675 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4676 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4677 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4678 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4679 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4680 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4681 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4682 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4683 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4684 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4685 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4686 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4687 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4688 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4689 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4690 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4691 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4692 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4693 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4694 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4695 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4696 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4697 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4698 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4699 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4700 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4701 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4702 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4703 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4704 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4705 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4706 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4707 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4708 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4709 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4710 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4711 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4712 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4713 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4714 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4715 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4716 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4717 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4718: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4719: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4720: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4721: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4722: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4723: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4724: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4725: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4726: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4727: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4728: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4729 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4730: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4731: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4732: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4733: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4734: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4735 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4736 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4737 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4738 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4739 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4740 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4741 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4742 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4743 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4744 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4745 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4746 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4747 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4748 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4749 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4750 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4751 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4752 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4753 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4754 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4755 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4756 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4757 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4758 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4759 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4760 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4761 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4762 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4763 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4764 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4765 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4766 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4767 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4768 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4769 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4770 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4771 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4772 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4773 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4774 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4775 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4776 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4777 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4778 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4779 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4780 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4781 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4782 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4783 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4784 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4785 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4786 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4787 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4788 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4789 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4790 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4791 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4792 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4793 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4794 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4795 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4796 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4797 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4798 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4799 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4800 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4801 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4802 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4803 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4804 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4805 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4806 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4807 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4808 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4809 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4810 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4811 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4812 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4813 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4814 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4815 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4816 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4817 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4818 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4819 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4820 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4821 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4822 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4823 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4824 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4825 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4826 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4827 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4828 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4829 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4830 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4831 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4832 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4833 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4834 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4835 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4836 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4837 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4838 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4839 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4840 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4841 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4842 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4843 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4844 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4845 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4846 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4847 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4848: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4849: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4850: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4851: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4852 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4853 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4854 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4855 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4856 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4857 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4858 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4859 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4860 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4861 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4862 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4863 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4864: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4865 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4866 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4867 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4868 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4869 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4870 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4871 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4872 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4873 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4874 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4875 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4876 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4877 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4878 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4879 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4880 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4881 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4882 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4883 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4884 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4885 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4886 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4887 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4888 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4889 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4890 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4891 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4892 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4893 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4894 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4895 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4896 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4897 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4898 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4899 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4900 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4901 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4902 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4903 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4904 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4905 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4906 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4907 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4908 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4909 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4910 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4911 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4912 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4913 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4914 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4915 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4916 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4917 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4918 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4919 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4920 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4921 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4922 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4923 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4924 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4925: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4926 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4927: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4928: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4929: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4930: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4931: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4932: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4933: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4934: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4935 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4936 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4937 HighTM +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4938: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4939: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4940: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4941 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4942 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4943 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4944 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4945 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4946 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4947 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4948 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4949 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4950 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4951 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4952 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4953 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4954 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4955 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4956 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4957 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4958 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4959 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4960 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4961 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4962 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4963 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4964 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4965 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4966 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4967 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4968 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4969 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4970 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4971: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4972: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4973 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4974: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4975 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4976 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4977 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4978 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4979 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4980: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4981: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4982: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4983: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4984: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4985: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4986 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4987 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4988 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4989 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4990 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4991 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4992 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4993 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4994 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4995 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4996 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4997 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4998 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 4999 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5000 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5001 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5002 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5003: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5004: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5005: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5006: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5007: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5008 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5009: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5010 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5011 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5012 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5013 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5014 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5015 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5016 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5017 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5018 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5019 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5020 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5021 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5022 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5023 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5024 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5025 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5026 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5027 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5028 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5029 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5030 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5031: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5032 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5033 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5034: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5035: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5036: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5037 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5038 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5039 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5040 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5041 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5042 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5043 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5044 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5045 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5046 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5047 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5048 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5049 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5050 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5051 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5052 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5053 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5054 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5055 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5056 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5057 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5058 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5059 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5060 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5061 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5062 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5063 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5064 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5065 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5066 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5067 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5068 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5069 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5070 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5071 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5072 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5073 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5074 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5075 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5076 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5077 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5078 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5079 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5080 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5081 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5082 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5083 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5084 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5085 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5086 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5087 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5088 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5089 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5090 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5091: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5092: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5093 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5094 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5095 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5096 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5097: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5098 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5099 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5100: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5101: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5102: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5103 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5104 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5105 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5106 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5107 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5108 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5109 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5110 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5111 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5112 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5113 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5114 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5115 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5116 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5117 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5118 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5119 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5120 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5121 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5122 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5123: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5124: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5125: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5126: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5127: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5128: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5129: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5130: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5131: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5132: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5133: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5134: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5135 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5136 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5137 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5138 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5139 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5140 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5141 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5142 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5143 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5144 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5145 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5146 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5147: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5148: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5149 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5150 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5151 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5152 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5153 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5154 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5155 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5156 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5157 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5158 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5159: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5160: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5161: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5162: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5163: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5164: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5165 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5166: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5167 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5168 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5169 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5170 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5171 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5172 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5173 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5174 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5175 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5176 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5177 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5178 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5179 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5180 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5181 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5182 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5183 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5184 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5185 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5186 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5187 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5188 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5189 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5190: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5191: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5192: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5193: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5194 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5195 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5196 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5197 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5198 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5199 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5200 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5201 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5202 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5203 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5204 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5205 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5206 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5207 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5208 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5209 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5210 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5211 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5212 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5213 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5214 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5215 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5216 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5217 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5218 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5219 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5220 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5221 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5222 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5223 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5224 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5225 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5226 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5227 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5228 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5229 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5230 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5231 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5232 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5233 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5234 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5235 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5236 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5237 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5238 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5239 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5240 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5241 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5242 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5243 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5244 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5245 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5246 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5247 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5248 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5249 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5250 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5251: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5252 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5253 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5254 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5255 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5256 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5257 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5258 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5259 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5260 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5261 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5262: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5263: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5264: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5265: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5266 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5267 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5268 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5269 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5270 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5271 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5272 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5273 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5274 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5275 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5276: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5277: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5278 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5279 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5280 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5281 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5282 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5283 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5284 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5285 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5286 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5287 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5288 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5289 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5290 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5291 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5292 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5293 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5294 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5295 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5296 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5297 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5298: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5299: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5300: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5301: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5302: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5303: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5304: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5305: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5306: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5307 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5308 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5309 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5310 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5311 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5312 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5313: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5314: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5315: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5316: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5317: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5318: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5319: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5320 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5321 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5322 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5323 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5324 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5325 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5326 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5327: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5328: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5329: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5330: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5331: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5332: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5333: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5334 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5335 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5336 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5337 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5338 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5339 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5340 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5341 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5342 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5343 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5344 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5345 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5346 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5347 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5348 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5349 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5350 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5351 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5352 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5353 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5354 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5355 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5356 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5357 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5358: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5359: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5360: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5361: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5362 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5363: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5364: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5365: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5366 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5367 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5368 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5369 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5370 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5371 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5372 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5373 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5374 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5375 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5376 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5377: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5378: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5379 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5380 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5381 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5382 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5383 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5384 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5385 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5386 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5387 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5388 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5389 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5390 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5391 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5392 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5393 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5394 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5395 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5396 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5397 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5398 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5399 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5400 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5401 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5402 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5403 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5404 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5405 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5406 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5407 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5408 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5409 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5410 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5411 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5412 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5413 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5414 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5415 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5416 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5417 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5418: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5419: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5420: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5421: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5422: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5423 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5424 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5425 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5426 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5427 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5428 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5429 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5430 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5431 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5432 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5433 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5434 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5435 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5436 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5437 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5438 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5439 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5440 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5441 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5442 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5443 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5444 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5445 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5446 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5447 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5448 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5449 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5450 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5451 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5452 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5453 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5454 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5455 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5456 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5457: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5458: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5459: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5460: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5461: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5462: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5463: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5464: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5465: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5466: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5467: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5468: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5469: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5470: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5471: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5472: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5473: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5474: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5475: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5476: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5477: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5478: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5479: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5480: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5481: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5482: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5483: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5484: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5485 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5486 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5487 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5488 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5489 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5490 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5491 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5492 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5493 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5494 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5495 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5496 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5497 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5498 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5499 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5500 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5501 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5502 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5503 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5504 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5505 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5506 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5507 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5508: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5509: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5510 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5511 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5512 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5513 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5514 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5515 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5516 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5517 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5518 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5519 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5520 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5521 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5522 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5523: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5524: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5525: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5526 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5527: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5528 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5529 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5530 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5531 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5532 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5533 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5534 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5535 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5536 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5537 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5538 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5539 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5540 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5541: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5542: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5543: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5544: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5545 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5546 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5547 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5548 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5549: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5550: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5551: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5552 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5553: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5554 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5555 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5556: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5557: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5558: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5559 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5560 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5561 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5562: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5563: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5564 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5565: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5566 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5567 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5568 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5569 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5570 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5571 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5572 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5573 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5574 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5575 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5576 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5577 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5578 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5579 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5580 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5581 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5582 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5583 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5584 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5585 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5586 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5587 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5588 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5589 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5590 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5591 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5592 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5593 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5594 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5595 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5596 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5597 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5598 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5599 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5600 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5601 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5602 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5603 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5604 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5605 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5606 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5607 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5608 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5609: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5610 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5611: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5612: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5613: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5614: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5615: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5616: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5617: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5618: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5619: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5620: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5621: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5622: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5623 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5624 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5625 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5626 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5627 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5628 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5629 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5630 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5631 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5632 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5633 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5634 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5635 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5636 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5637 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5638 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5639 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5640 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5641 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5642 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5643 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5644 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5645 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5646 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5647 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5648 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5649 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5650: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5651: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5652: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5653 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5654: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5655: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5656 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5657 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5658 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5659 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5660 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5661 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5662 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5663 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5664 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5665 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5666 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5667 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5668 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5669 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5670 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5671 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5672 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5673 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5674 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5675 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5676 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5677 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5678 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5679 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5680 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5681 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5682 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5683 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5684 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5685 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5686 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5687 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5688 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5689 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5690 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5691 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5692 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5693 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5694: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5695 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5696 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5697 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5698 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5699 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5700 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5701 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5702 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5703 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5704 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5705 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5706 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5707 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5708 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5709 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5710 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5711 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5712 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5713 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5714 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5715 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5716 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5717 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5718 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5719 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5720 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5721 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5722 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5723 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5724 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5725: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5726 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5727 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5728 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5729 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5730 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5731 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5732 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5733 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5734 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5735 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5736 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5737 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5738 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5739 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5740 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5741 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5742 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5743 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5744 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5745 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5746 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5747 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5748 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5749 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5750 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5751 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5752 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5753 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5754 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5755 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5756 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5757 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5758 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5759 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5760 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5761 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5762 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5763 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5764 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5765 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5766 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5767 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5768 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5769 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5770 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5771 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5772 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5773 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5774 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5775 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5776 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5777: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5778: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5779: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5780: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5781: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5782: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5783: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5784: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5785: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5786 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5787: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5788 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5789: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5790: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5791: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5792: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5793: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5794: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5795: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5796: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5797: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5798 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5799 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5800 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5801 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5802 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5803: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5804: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5805: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5806: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5807: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5808 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5809 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5810 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5811 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5812 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5813 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5814 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5815 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5816 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5817 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5818 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5819 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5820: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5821: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5822: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5823: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5824 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5825 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5826 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5827 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5828 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5829 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5830 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5831: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5832: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5833: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5834: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5835: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5836: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5837 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5838 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5839 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5840 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5841 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5842 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5843 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5844 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5845 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5846 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5847 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5848 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5849 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5850 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5851 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5852 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5853 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5854 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5855 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5856 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5857 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5858 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5859 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5860 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5861 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5862 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5863 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5864 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5865 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5866 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5867 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5868 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5869 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5870 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5871 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5872 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5873 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5874 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5875 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5876 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5877 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5878 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5879 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5880 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5881 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5882 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5883 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5884 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5885 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5886 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5887 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5888 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5889 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5890 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5891 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5892 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5893 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5894 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5895 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5896 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5897 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5898 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5899 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5900 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5901 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5902 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5903 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5904 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5905 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5906 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5907 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5908 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5909 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5910 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5911 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5912 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5913 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5914 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5915 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5916 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5917 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5918 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5919 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5920: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5921: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5922: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5923: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5924: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5925: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5926: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5927: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5928: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5929: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5930: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5931 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5932 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5933 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5934 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5935 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5936 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5937 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5938 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5939 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5940 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5941 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5942 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5943 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5944 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5945 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5946 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5947: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5948: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5949: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5950: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5951: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5952: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5953: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5954: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5955: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5956: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5957: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5958: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5959: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5960: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5961 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5962 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5963 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5964 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5965 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5966 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5967 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5968 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5969 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5970 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5971 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5972 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5973 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5974 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5975 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5976 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5977 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5978 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5979 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5980 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5981 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5982 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5983 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5984 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5985 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5986 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5987 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5988 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5989 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5990 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5991 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5992 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5993 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5994 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5995 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5996 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5997 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5998: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 5999: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6000: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6001: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6002: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6003 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6004 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6005: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6006: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6007: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6008: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6009 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6010 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6011 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6012 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6013 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6014 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6015 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6016 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6017 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6018 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6019 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6020 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6021 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6022 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6023 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6024 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6025 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6026 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6027 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6028 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6029 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6030 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6031 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6032 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6033 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6034 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6035 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6036 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6037 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6038 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6039 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6040 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6041 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6042 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6043 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6044 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6045 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6046 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6047 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6048 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6049 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6050 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6051 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6052 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6053 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6054 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6055 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6056 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6057 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6058 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6059 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6060: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6061: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6062: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6063: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6064: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6065: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6066: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6067: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6068: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6069: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6070: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6071: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6072: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6073: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6074 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6075 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6076 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6077 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6078 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6079 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6080 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6081 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6082 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6083 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6084 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6085 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6086: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6087 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6088 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6089 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6090 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6091 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6092 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6093 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6094 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6095 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6096 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6097 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6098 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6099 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6100 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6101 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6102 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6103 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6104 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6105 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6106 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6107 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6108 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6109 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6110 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6111 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6112 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6113 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6114 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6115 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6116 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6117 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6118 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6119 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6120 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6121 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6122 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6123 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6124 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6125 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6126 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6127 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6128 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6129 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6130 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6131 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6132 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6133 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6134 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6135 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6136 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6137 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6138 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6139 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6140 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6141 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6142 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6143 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6144 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6145 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6146 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6147 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6148 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6149 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6150 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6151 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6152 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6153 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6154 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6155 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6156 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6157 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6158 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6159 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6160 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6161 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6162 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6163 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6164 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6165 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6166 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6167 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6168 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6169 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6170 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6171 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6172 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6173 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6174 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6175 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6176 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6177 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6178 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6179 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6180 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6181 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6182 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6183 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6184 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6185 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6186 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6187 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6188 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6189 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6190 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6191 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6192 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6193 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6194 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6195 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6196 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6197 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6198 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6199 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6200 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6201 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6202 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6203 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6204 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6205 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6206 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6207 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6208 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6209 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6210: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6211 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6212 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6213 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6214 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6215 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6216 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6217: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6218: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6219 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6220 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6221 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6222 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6223 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6224 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6225 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6226 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6227 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6228 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6229 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6230 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6231 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6232 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6233 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6234 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6235 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6236 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6237 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6238 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6239 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6240 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6241 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6242 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6243 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6244 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6245 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6246 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6247: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6248: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6249 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6250 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6251 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6252 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6253 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6254 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6255 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6256 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6257 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6258: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6259: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6260: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6261: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6262: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6263 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6264 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6265 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6266 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6267 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6268 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6269 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6270 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6271 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6272 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6273 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6274 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6275 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6276 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6277 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6278 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6279 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6280 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6281 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6282: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6283: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6284: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6285: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6286: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6287: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6288: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6289: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6290: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6291: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6292: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6293: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6294: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6295: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6296: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6297: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6298: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6299: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6300 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6301 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6302 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6303 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6304 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6305 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6306 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6307 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6308 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6309 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6310 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6311 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6312 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6313 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6314 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6315 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6316 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6317 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6318 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6319 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6320 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6321 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6322 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6323 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6324 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6325 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6326 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6327 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6328 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6329 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6330 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6331 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6332 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6333 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6334 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6335 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6336 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6337 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6338 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6339 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6340 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6341 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6342 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6343 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6344 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6345 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6346 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6347 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6348 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6349 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6350 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6351 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6352 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6353 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6354 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6355 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6356 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6357 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6358 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6359 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6360 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6361 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6362 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6363 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6364 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6365 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6366 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6367 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6368 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6369 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6370 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6371 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6372 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6373 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6374 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6375 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6376 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6377 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6378 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6379 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6380 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6381 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6382 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6383 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6384 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6385 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6386 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6387 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6388 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6389 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6390 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6391 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6392 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6393 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6394 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6395 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6396 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6397 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6398 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6399 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6400 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6401 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6402 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6403 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6404 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6405 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6406 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6407 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6408 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6409 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6410 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6411 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6412 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6413 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6414 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6415 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6416 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6417 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6418 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6419 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6420 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6421 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6422 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6423 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6424 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6425 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6426 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6427 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6428 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6429 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6430 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6431 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6432 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6433 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6434 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6435 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6436 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6437 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6438 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6439 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6440 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6441 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6442 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6443 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6444 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6445 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6446 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6447 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6448 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6449 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6450 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6451 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6452 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6453 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6454 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6455 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6456 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6457 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6458 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6459 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6460 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6461 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6462 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6463 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6464 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6465 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6466 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6467 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6468 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6469 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6470 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6471 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6472 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6473 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6474 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6475 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6476 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6477 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6478 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6479 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6480 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6481 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6482 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6483 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6484 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6485 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6486 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6487 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6488 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6489 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6490 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6491 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6492 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6493: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6494: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6495: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6496: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6497 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6498 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6499 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6500 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6501 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6502 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6503 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6504 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6505 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6506 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6507 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6508 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6509 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6510 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6511 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6512 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6513 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6514 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6515 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6516 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6517 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6518 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6519 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6520 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6521 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6522 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6523 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6524 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6525 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6526 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6527 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6528 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6529 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6530: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6531: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6532: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6533: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6534: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6535: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6536 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6537 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6538 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6539 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6540 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6541 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6542 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6543 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6544 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6545 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6546 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6547 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6548 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6549 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6550 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6551 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6552 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6553 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6554 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6555 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6556 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6557 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6558 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6559 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6560 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6561 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6562 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6563: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6564: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6565: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6566: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6567: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6568: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6569: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6570: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6571: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6572: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6573: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6574: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6575: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6576: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6577: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6578: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6579: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6580: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6581: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6582: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6583: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6584: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6585: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6586: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6587: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6588: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6589: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6590: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6591: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6592: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6593: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6594: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6595: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6596: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6597 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6598: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6599 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6600 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6601 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6602 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6603 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6604: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6605: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6606: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6607: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6608: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6609: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6610: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6611: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6612: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6613: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6614: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6615: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6616: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6617: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6618: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6619: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6620: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6621: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6622: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6623: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6624: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6625: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6626: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6627 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6628 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6629 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6630 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6631 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6632: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6633: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6634: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6635 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6636 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6637 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6638 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6639 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6640: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6641 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6642: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6643: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6644: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6645: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6646: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6647: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6648: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6649: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6650: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6651: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6652: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6653 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6654: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6655 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6656 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6657 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6658 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6659 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6660 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6661 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6662 HighTM +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6663 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6664: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6665: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6666: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6667 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6668 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6669 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6670: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6671: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6672: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6673: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6674: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6675: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6676: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6677 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6678 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6679 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6680 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6681 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6682 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6683 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6684 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6685 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6686 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6687 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6688 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6689 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6690 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6691 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6692 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6693 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6694 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6695 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6696 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6697 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6698 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6699 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6700 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6701 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6702 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6703 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6704 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6705 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6706 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6707 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6708 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6709 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6710 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6711 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6712 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6713 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6714 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6715 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6716 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6717 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6718 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6719 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6720 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6721 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6722 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6723 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6724 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6725 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6726 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6727 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6728 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6729 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6730 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6731 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6732 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6733 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6734: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6735 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6736 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6737 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6738 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6739 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6740: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6741: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6742 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6743 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6744 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6745 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6746 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6747 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6748 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6749 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6750 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6751 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6752 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6753 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6754 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6755 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6756 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6757 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6758 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6759 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6760 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6761 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6762 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6763 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6764 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6765 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6766 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6767 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6768 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6769 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6770 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6771 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6772 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6773 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6774 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6775: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6776: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6777: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6778: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6779: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6780: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6781: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6782: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6783: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6784: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6785: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6786: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6787: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6788: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6789: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6790: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6791: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6792: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6793: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6794 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6795 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6796 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6797 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6798 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6799 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6800 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6801 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6802 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6803 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6804 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6805 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6806 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6807 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6808 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6809 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6810 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6811 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6812 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6813 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6814 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6815 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6816 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6817 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6818 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6819 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6820 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6821 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6822 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6823 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6824 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6825 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6826: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6827: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6828 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6829: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6830: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6831: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6832: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6833: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6834: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6835: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6836: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6837: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6838: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6839: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6840: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6841: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6842: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6843: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6844: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6845: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6846 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6847 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6848 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6849 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6850 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6851 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6852 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6853 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6854 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6855 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6856 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6857 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6858 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6859 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6860: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6861: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6862: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6863: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6864: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6865: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6866: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6867: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6868: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6869: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6870: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6871: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6872: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6873 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6874 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6875 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6876 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6877 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6878 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6879 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6880 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6881 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6882 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6883 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6884 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6885 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6886 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6887 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6888 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6889 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6890 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6891 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6892: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6893: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6894: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6895: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6896: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6897: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6898: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6899 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6900 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6901 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6902 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6903 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6904 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6905 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6906 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6907 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6908 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6909 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6910 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6911 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6912 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6913 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6914 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6915 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6916 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6917: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6918: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6919: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6920: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6921: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6922 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6923 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6924 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6925 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6926 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6927 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6928 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6929 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6930 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6931 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6932 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6933 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6934 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6935 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6936 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6937 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6938 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6939 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6940 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6941 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6942 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6943 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6944 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6945 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6946 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6947 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6948 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6949 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6950 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6951 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6952 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6953 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6954 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6955 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6956 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6957 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6958 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6959 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6960 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6961 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6962 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6963 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6964 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6965 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6966 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6967 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6968 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6969 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6970 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6971 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6972 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6973 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6974 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6975 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6976 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6977 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6978 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6979 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6980: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6981: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6982 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6983: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6984: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6985: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6986: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6987: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6988: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6989: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6990 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6991 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6992 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6993 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6994 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6995 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6996 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6997 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6998 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 6999 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7000 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7001 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7002: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7003: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7004: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7005: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7006: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7007: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7008: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7009: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7010: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7011: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7012: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7013: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7014: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7015: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7016: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7017: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7018: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7019: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7020: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7021: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7022: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7023: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7024: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7025: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7026: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7027: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7028: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7029: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7030: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7031: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7032: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7033: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7034: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7035: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7036 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7037 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7038 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7039 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7040 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7041 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7042 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7043 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7044 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7045 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7046 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7047 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7048 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7049 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7050 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7051 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7052 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7053 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7054 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7055 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7056: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7057: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7058: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7059: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7060: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7061: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7062: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7063: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7064: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7065: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7066 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7067 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7068 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7069 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7070 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7071 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7072 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7073 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7074 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7075 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7076 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7077 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7078 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7079 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7080 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7081 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7082 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7083 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7084 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7085 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7086 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7087 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7088 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7089 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7090 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7091 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7092 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7093 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7094 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7095: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7096: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7097: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7098: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7099 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7100: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7101: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7102: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7103: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7104 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7105 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7106 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7107 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7108 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7109 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7110 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7111 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7112 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7113 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7114 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7115 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7116 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7117 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7118 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7119 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7120 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7121 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7122 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7123 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7124 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7125 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7126 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7127 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7128 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7129 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7130 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7131 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7132: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7133: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7134: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7135: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7136 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7137 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7138 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7139 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7140 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7141 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7142 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7143 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7144 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7145 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7146 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7147 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7148 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7149 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7150 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7151 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7152 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7153 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7154 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7155 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7156 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7157 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7158 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7159 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7160 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7161 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7162 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7163 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7164 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7165 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7166 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7167 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7168 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7169 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7170 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7171 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7172 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7173 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7174 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7175 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7176 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7177 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7178 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7179 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7180 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7181 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7182 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7183 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7184 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7185 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7186 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7187 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7188 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7189 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7190 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7191 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7192 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7193 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7194 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7195 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7196 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7197 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7198 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7199 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7200 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7201 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7202 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7203 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7204 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7205 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7206 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7207 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7208 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7209 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7210 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7211: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7212: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7213: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7214: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7215: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7216: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7217 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7218 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7219 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7220 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7221 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7222 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7223 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7224 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7225 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7226 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7227: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7228 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7229 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7230 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7231 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7232 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7233 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7234 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7235 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7236 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7237 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7238 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7239 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7240 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7241 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7242 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7243 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7244 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7245: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7246: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7247 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7248: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7249: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7250 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7251 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7252 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7253 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7254 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7255 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7256 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7257 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7258 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7259 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7260 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7261 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7262 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7263 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7264 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7265 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7266 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7267 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7268 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7269 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7270 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7271 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7272 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7273: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7274 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7275 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7276 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7277 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7278 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7279 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7280 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7281 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7282 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7283 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7284 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7285 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7286 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7287 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7288: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7289 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7290: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7291: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7292: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7293: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7294: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7295: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7296: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7297: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7298: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7299 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7300 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7301 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7302 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7303: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7304 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7305 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7306 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7307 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7308 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7309 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7310 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7311 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7312 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7313 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7314 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7315 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7316 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7317 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7318 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7319 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7320 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7321 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7322 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7323 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7324 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7325 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7326 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7327 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7328 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7329 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7330 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7331 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7332 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7333: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7334 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7335 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7336 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7337 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7338 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7339 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7340 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7341 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7342 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7343 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7344 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7345 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7346 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7347 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7348 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7349 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7350 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7351 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7352: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7353: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7354: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7355: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7356: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7357: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7358 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7359: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7360 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7361 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7362 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7363 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7364 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7365 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7366 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7367 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7368 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7369 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7370 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7371 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7372 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7373 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7374 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7375 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7376 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7377 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7378 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7379 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7380 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7381 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7382 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7383 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7384 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7385 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7386 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7387 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7388 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7389 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7390 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7391 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7392 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7393 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7394 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7395 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7396 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7397 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7398 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7399 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7400 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7401 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7402 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7403 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7404 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7405: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7406: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7407: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7408 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7409: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7410: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7411: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7412: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7413: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7414: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7415: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7416 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7417 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7418 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7419 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7420 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7421 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7422 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7423 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7424 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7425 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7426 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7427 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7428 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7429 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7430 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7431 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7432 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7433 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7434: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7435 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7436 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7437 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7438 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7439 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7440 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7441 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7442 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7443 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7444 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7445 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7446 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7447 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7448 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7449 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7450 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7451 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7452 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7453 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7454 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7455 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7456 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7457 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7458 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7459: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7460: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7461: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7462: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7463 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7464: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7465: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7466 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7467 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7468 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7469 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7470 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7471 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7472 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7473 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7474 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7475 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7476 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7477 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7478 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7479 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7480 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7481 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7482 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7483 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7484 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7485 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7486 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7487 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7488 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7489 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7490 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7491 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7492 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7493 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7494 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7495 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7496 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7497 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7498 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7499 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7500 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7501 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7502 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7503 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7504 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7505 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7506 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7507 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7508 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7509 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7510 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7511 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7512 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7513 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7514 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7515 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7516 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7517 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7518 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7519 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7520 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7521 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7522 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7523 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7524 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7525 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7526 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7527 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7528 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7529 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7530 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7531 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7532 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7533 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7534 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7535 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7536 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7537 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7538 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7539 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7540 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7541 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7542 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7543 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7544 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7545 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7546 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7547 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7548 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7549 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7550 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7551 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7552 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7553 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7554 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7555: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7556 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7557 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7558 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7559 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7560 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7561 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7562 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7563 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7564: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7565 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7566 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7567: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7568: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7569: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7570: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7571: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7572: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7573: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7574 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7575 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7576 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7577 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7578 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7579 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7580 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7581 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7582 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7583 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7584 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7585 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7586 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7587 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7588 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7589 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7590 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7591 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7592 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7593 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7594 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7595 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7596 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7597 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7598 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7599 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7600 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7601 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7602 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7603 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7604 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7605 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7606 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7607: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7608 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7609 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7610: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7611: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7612: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7613: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7614: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7615: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7616: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7617: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7618 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7619 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7620 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7621 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7622: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7623 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7624 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7625: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7626: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7627: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7628: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7629 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7630 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7631 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7632 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7633 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7634 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7635 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7636 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7637 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7638 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7639 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7640 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7641: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7642: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7643: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7644: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7645: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7646: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7647: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7648 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7649 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7650 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7651 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7652 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7653 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7654 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7655 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7656 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7657 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7658 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7659 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7660 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7661 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7662 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7663 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7664 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7665 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7666 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7667 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7668 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7669 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7670 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7671 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7672 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7673 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7674 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7675 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7676 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7677 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7678 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7679 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7680 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7681 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7682 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7683 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7684 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7685 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7686 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7687 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7688 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7689 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7690 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7691: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7692: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7693 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7694 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7695 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7696 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7697 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7698: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7699: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7700 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7701 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7702: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7703 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7704 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7705 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7706 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7707 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7708 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7709 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7710 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7711 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7712 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7713 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7714 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7715 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7716 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7717 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7718 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7719 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7720 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7721 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7722 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7723 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7724 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7725 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7726 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7727 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7728 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7729 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7730 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7731 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7732 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7733 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7734 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7735 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7736 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7737 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7738 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7739 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7740 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7741 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7742 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7743 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7744 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7745 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7746 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7747 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7748 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7749 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7750 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7751 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7752 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7753 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7754 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7755 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7756 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7757 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7758 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7759 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7760 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7761 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7762 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7763 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7764 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7765 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7766 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7767 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7768 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7769 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7770 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7771 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7772 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7773 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7774 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7775 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7776 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7777 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7778 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7779 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7780 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7781 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7782 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7783 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7784 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7785 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7786 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7787 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7788 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7789: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7790: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7791: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7792: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7793: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7794: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7795: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7796: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7797 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7798: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7799: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7800: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7801: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7802: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7803: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7804: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7805: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7806: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7807: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7808: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7809: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7810: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7811: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7812: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7813 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7814 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7815 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7816 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7817 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7818 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7819 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7820 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7821 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7822 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7823 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7824 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7825 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7826 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7827 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7828 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7829 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7830 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7831 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7832 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7833 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7834 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7835 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7836 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7837 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7838 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7839 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7840 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7841 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7842 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7843 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7844 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7845 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7846 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7847 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7848 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7849 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7850 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7851 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7852 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7853 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7854 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7855 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7856 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7857 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7858 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7859 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7860 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7861 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7862 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7863 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7864 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7865 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7866 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7867 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7868 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7869 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7870 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7871 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7872 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7873: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7874 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7875 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7876 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7877 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7878: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7879 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7880: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7881: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7882: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7883: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7884: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7885: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7886 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7887 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7888 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7889: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7890: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7891: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7892: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7893 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7894 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7895: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7896: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7897 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7898: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7899: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7900: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7901: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7902 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7903 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7904 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7905 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7906 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7907 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7908 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7909 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7910 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7911 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7912 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7913 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7914 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7915 LowGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7916 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7917 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7918 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7919 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7920 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7921 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7922 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7923 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7924 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7925 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7926 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7927 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7928 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7929 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7930 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7931 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7932: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7933 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7934 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7935 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7936 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7937 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7938 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7939 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7940 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7941 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7942 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7943 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7944 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7945 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7946 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7947 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7948 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7949 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7950 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7951 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7952 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7953 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7954 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7955 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7956 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7957 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7958 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7959 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7960 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7961 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7962 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7963 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7964 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7965 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7966: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7967: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7968: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7969: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7970: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7971 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7972: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7973: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7974: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7975: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7976 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7977 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7978 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7979 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7980 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7981 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7982 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7983 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7984 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7985 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7986 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7987 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7988 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7989 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7990: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7991 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7992 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7993 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7994 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7995 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7996 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7997 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7998 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 7999 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8000 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8001 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8002 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8003 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8004 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8005 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8006 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8007 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8008 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8009 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8010 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8011 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8012 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8013: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8014 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8015 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8016: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8017 DimerFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8018: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8019: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8020: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8021: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8022 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8023 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8024 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8025 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8026 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8027 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8028 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8029 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8030 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8031 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8032 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8033 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8034 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8035 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8036 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8037 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8038 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8039 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8040 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8041 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8042 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8043 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8044 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8045 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8046 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8047 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8048 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8049 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8050 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8051 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8052 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8053 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8054 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8055 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8056 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8057 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8058 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8059 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8060 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8061 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8062 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8063: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8064 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8065: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8066: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8067: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8068 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8069 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8070 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8071 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8072 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8073 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8074 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8075 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8076 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8077 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8078 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8079 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8080 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8081: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8082: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8083: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8084: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8085: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8086: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8087 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8088: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8089: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8090 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8091: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8092 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8093 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8094 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8095 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8096 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8097 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8098 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8099 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8100 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8101 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8102 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8103 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8104 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8105 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8106 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8107 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8108 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8109: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8110: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8111: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8112: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8113: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8114: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8115: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8116: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8117: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8118: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8119: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8120: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8121: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8122: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8123: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8124: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8125: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8126: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8127: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8128: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8129: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8130 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8131 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8132 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8133 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8134 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8135 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8136 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8137 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8138 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8139 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8140 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8141 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8142 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8143 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8144 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8145 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8146 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8147 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8148 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8149 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8150 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8151 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8152 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8153 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8154 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8155 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8156 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8157 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8158 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8159 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8160 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8161 HighTM +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8162 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8163 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8164 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8165: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8166 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8167 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8168 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8169 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8170 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8171 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8172 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8173 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8174: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8175: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8176: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8177: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8178: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8179: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8180: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8181: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8182: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8183: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8184: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8185: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8186: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8187: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8188: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8189: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8190: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8191: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8192: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8193 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8194 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8195 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8196 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8197 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8198 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8199 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8200 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8201 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8202 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8203 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8204 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8205 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8206 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8207 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8208 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8209 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8210 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8211 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8212 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8213 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8214 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8215 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8216 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8217 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8218 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8219 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8220 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8221 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8222 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8223 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8224 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8225 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8226 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8227 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8228 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8229 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8230 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8231 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8232 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8233 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8234 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8235 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8236 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8237 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8238 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8239 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8240 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8241 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8242 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8243 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8244 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8245 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8246 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8247 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8248 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8249 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8250 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8251 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8252 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8253 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8254 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8255 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8256 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8257 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8258 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8259 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8260 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8261 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8262 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8263 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8264 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8265 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8266 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8267 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8268 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8269 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8270 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8271 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8272 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8273 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8274 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8275 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8276 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8277 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8278 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8279 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8280 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8281 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8282 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8283 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8284: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8285: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8286: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8287 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8288: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8289: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8290 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8291 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8292 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8293 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8294 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8295 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8296 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8297 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8298 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8299 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8300 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8301 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8302 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8303 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8304 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8305 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8306 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8307 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8308 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8309 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8310 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8311 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8312 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8313 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8314 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8315 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8316 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8317 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8318 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8319 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8320 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8321 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8322 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8323 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8324 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8325 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8326 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8327 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8328 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8329 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8330 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8331 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8332 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8333 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8334 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8335 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8336 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8337 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8338 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8339 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8340 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8341 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8342 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8343 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8344 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8345 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8346 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8347 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8348 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8349 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8350 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8351 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8352 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8353 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8354 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8355 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8356: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8357: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8358 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8359: AllPass +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8360 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8361 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8362 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8363 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8364 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8365 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8366 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8367 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8368 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8369 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8370 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8371 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8372 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8373 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8374 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8375 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8376 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8377 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8378 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8379 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8380 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8381 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8382 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8383 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8384 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8385 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8386 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8387 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8388 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8389 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8390 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8391 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8392 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8393 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8394 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8395 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8396 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8397 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8398 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8399 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8400 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8401 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8402 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8403 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8404 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8405 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8406 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8407 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8408 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8409 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8410 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8411 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8412 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8413 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8414 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8415 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8416 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8417 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8418 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8419 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8420 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8421 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8422 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8423 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8424 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8425 HighGC +2024-02-28 at 17:47:53 | DEBUG | FKmer: 8426: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 0 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 3 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 4 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 5 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 6 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 7 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 8 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 9: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 10: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 11: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 12: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 13: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 14: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 15: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 16: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 17: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 18: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 19: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 20: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 21: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 22: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 23: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 24: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 25: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 26: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 27: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 28: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 29: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 30 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 31 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 32 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 33 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 34 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 35 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 36 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 37 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 38 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 39 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 40 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 41 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 42 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 43 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 44 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 45 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 46 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 47 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 48 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 49 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 50 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 51 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 52 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 53 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 54 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 55 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 56 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 57 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 58 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 59 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 60 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 61 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 62 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 63 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 64 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 65 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 66 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 67 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 68 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 69 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 70 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 71 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 72 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 73 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 74 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 75 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 76 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 77 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 78 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 79 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 80 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 81 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 82 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 83 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 84 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 85 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 86 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 87 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 88 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 89: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 90: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 91: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 92: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 93 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 94 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 95 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 96: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 97: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 98 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 99 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 100 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 101 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 102 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 103 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 104 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 105 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 106: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 107: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 108: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 109 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 110: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 111 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 112 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 113: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 114: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 115: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 116: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 117: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 118: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 119 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 120 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 121 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 122 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 123 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 124 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 125: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 126: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 127: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 128: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 129: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 130: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 131 LowGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 132 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 133 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 134 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 135 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 136 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 137 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 138 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 139 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 140 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 141 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 142 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 143 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 144 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 145 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 146 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 147 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 148: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 149: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 150: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 151: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 152 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 153 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 154 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 155 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 156 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 157 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 158 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 159 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 160 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 161 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 162 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 163 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 164 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 165 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 166 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 167 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 168 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 169 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 170 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 171 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 172: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 173: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 174: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 175 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 176 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 177 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 178 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 179 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 180 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 181 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 182: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 183: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 184: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 185: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 186: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 187: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 188: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 189: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 190 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 191 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 192 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 193 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 194 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 195 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 196: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 197 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 198 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 199 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 200 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 201 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 202 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 203 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 204 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 205 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 206: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 207: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 208 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 209 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 210 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 211 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 212 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 213 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 214: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 215: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 216: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 217 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 218 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 219 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 220 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 221 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 222 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 223 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 224 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 225 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 226 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 227 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 228 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 229 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 230 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 231 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 232 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 233 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 234 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 235 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 236 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 237 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 238 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 239 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 240 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 241 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 242 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 243 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 244 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 245 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 246 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 247 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 248 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 249 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 250 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 251 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 252 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 253 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 254 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 255 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 256 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 257 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 258 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 259 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 260 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 261 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 262 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 263 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 264 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 265 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 266 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 267 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 268 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 269 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 270 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 271 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 272 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 273 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 274 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 275 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 276 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 277 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 278 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 279 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 280 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 281 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 282 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 283: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 284 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 285: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 286: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 287: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 288: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 289: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 290: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 291: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 292: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 293 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 294: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 295: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 296: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 297 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 298 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 299: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 300: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 301: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 302: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 303: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 304: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 305: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 306: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 307: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 308: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 309: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 310 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 311 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 312 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 313 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 314 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 315 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 316 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 317 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 318 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 319 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 320 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 321 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 322 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 323 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 324 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 325 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 326 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 327 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 328 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 329 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 330 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 331 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 332 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 333 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 334 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 335 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 336 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 337 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 338 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 339 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 340 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 341 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 342: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 343: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 344 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 345 HighTM +2024-02-28 at 17:47:53 | DEBUG | RKmer: 346 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 347 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 348 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 349 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 350 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 351 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 352 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 353 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 354 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 355 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 356 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 357 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 358 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 359 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 360 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 361 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 362 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 363 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 364 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 365 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 366 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 367 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 368 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 369 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 370 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 371 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 372 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 373 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 374 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 375 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 376 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 377 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 378 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 379 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 380 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 381 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 382 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 383 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 384 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 385 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 386 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 387 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 388 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 389 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 390 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 391 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 392 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 393 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 394 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 395 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 396 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 397 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 398 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 399 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 400 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 401 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 402 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 403 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 404 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 405 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 406 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 407 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 408 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 409 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 410 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 411 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 412 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 413 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 414 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 415 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 416 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 417 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 418 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 419 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 420 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 421 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 422 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 423 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 424 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 425 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 426 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 427 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 428 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 429 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 430 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 431 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 432 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 433 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 434 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 435 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 436 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 437 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 438 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 439 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 440 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 441 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 442 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 443 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 444 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 445 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 446 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 447 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 448 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 449 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 450 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 451 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 452 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 453 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 454 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 455 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 456 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 457 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 458 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 459 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 460 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 461 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 462 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 463 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 464 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 465 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 466 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 467 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 468 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 469 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 470 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 471 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 472 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 473 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 474 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 475 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 476 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 477 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 478 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 479 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 480 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 481 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 482 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 483 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 484 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 485 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 486 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 487 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 488 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 489: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 490: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 491 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 492 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 493 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 494 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 495 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 496 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 497 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 498 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 499 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 500 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 501 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 502 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 503 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 504 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 505 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 506 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 507 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 508: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 509 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 510 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 511 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 512 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 513 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 514 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 515 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 516 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 517 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 518 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 519 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 520 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 521 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 522 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 523 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 524 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 525 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 526 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 527 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 528 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 529 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 530 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 531 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 532 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 533 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 534 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 535 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 536 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 537 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 538 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 539 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 540 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 541 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 542 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 543 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 544 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 545 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 546 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 547 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 548 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 549 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 550 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 551 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 552 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 553 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 554 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 555 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 556 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 557 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 558 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 559 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 560 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 561 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 562 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 563 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 564 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 565 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 566 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 567 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 568: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 569: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 570 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 571: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 572: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 573 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 574 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 575 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 576 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 577 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 578 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 579 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 580 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 581 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 582 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 583 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 584 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 585 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 586 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 587 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 588 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 589 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 590 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 591 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 592 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 593 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 594 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 595 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 596 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 597 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 598 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 599 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 600 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 601 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 602 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 603 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 604 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 605 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 606 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 607 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 608 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 609 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 610 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 611 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 612 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 613 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 614 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 615 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 616: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 617: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 618: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 619: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 620: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 621: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 622: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 623: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 624 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 625 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 626 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 627 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 628 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 629 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 630: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 631: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 632: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 633: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 634: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 635 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 636 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 637 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 638 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 639 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 640 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 641 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 642 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 643 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 644 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 645 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 646 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 647 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 648 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 649 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 650 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 651 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 652 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 653 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 654 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 655 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 656 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 657 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 658 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 659 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 660 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 661 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 662 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 663 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 664 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 665 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 666 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 667 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 668 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 669 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 670 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 671 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 672 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 673 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 674: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 675: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 676: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 677 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 678 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 679 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 680 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 681 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 682 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 683 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 684 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 685 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 686 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 687 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 688 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 689 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 690 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 691 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 692 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 693 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 694 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 695 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 696 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 697 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 698 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 699 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 700 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 701 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 702 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 703 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 704 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 705 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 706 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 707 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 708 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 709 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 710 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 711 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 712 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 713 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 714 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 715 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 716 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 717 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 718 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 719 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 720 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 721 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 722 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 723 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 724 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 725 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 726 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 727 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 728 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 729 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 730 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 731 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 732 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 733 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 734 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 735 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 736 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 737 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 738 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 739 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 740 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 741 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 742 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 743 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 744 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 745 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 746 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 747 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 748 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 749 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 750 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 751 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 752 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 753 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 754 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 755 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 756 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 757 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 758 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 759 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 760 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 761 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 762 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 763 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 764: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 765: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 766: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 767: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 768: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 769: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 770 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 771 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 772 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 773 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 774 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 775 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 776 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 777 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 778 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 779 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 780 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 781 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 782 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 783 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 784 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 785 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 786 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 787: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 788: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 789: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 790: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 791 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 792: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 793: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 794: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 795: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 796: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 797: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 798: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 799 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 800 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 801 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 802 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 803 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 804 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 805 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 806 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 807 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 808 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 809 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 810 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 811 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 812 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 813 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 814 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 815 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 816 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 817 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 818 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 819 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 820 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 821 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 822 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 823 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 824 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 825 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 826 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 827 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 828 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 829 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 830 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 831: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 832: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 833 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 834 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 835 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 836 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 837 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 838 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 839 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 840 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 841 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 842 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 843 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 844: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 845: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 846: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 847: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 848 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 849 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 850 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 851 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 852 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 853 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 854 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 855 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 856 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 857 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 858 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 859 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 860 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 861 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 862: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 863 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 864: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 865 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 866 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 867 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 868 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 869 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 870 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 871 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 872 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 873 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 874 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 875 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 876 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 877 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 878 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 879 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 880 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 881 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 882 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 883 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 884 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 885 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 886 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 887 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 888 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 889 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 890 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 891 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 892 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 893 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 894 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 895 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 896 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 897 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 898 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 899 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 900 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 901 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 902 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 903 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 904 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 905 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 906 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 907 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 908 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 909 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 910 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 911 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 912 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 913 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 914 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 915 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 916 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 917 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 918 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 919 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 920 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 921 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 922 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 923 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 924: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 925: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 926: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 927: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 928: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 929 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 930: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 931: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 932: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 933: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 934 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 935 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 936 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 937 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 938 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 939 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 940 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 941 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 942 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 943 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 944 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 945 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 946 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 947 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 948 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 949 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 950 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 951 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 952 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 953 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 954 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 955 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 956 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 957 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 958 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 959 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 960 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 961 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 962 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 963 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 964 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 965 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 966 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 967 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 968 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 969 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 970 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 971 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 972 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 973 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 974 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 975 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 976 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 977 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 978 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 979 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 980 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 981 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 982 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 983 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 984 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 985: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 986: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 987: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 988: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 989: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 990 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 991 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 992 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 993: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 994: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 995: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 996: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 997 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 998 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 999 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1000 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1001: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1002: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1003 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1004: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1005 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1006 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1007: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1008 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1009 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1010: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1011 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1012 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1013 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1014: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1015: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1016 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1017 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1018 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1019 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1020 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1021 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1022 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1023 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1024 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1025 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1026 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1027 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1028 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1029 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1030 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1031 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1032 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1033 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1034 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1035 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1036 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1037 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1038 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1039 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1040 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1041 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1042 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1043 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1044 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1045: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1046: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1047 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1048 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1049: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1050: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1051 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1052: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1053 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1054: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1055: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1056 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1057: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1058 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1059 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1060 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1061 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1062 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1063: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1064 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1065 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1066 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1067: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1068: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1069: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1070: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1071: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1072: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1073: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1074: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1075 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1076: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1077: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1078: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1079 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1080 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1081 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1082 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1083 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1084 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1085 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1086 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1087 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1088 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1089 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1090 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1091 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1092 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1093 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1094 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1095 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1096 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1097 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1098 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1099 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1100 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1101 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1102 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1103 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1104 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1105 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1106 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1107 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1108 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1109 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1110 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1111 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1112 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1113 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1114 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1115 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1116 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1117 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1118 HighTM +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1119 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1120 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1121 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1122 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1123 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1124 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1125 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1126 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1127 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1128 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1129 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1130 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1131 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1132 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1133 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1134 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1135 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1136 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1137 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1138 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1139 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1140 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1141 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1142 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1143 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1144 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1145 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1146 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1147 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1148 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1149: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1150: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1151: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1152: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1153: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1154 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1155 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1156 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1157 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1158 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1159 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1160 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1161 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1162: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1163 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1164 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1165 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1166 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1167 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1168 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1169 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1170 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1171 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1172 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1173 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1174 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1175 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1176 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1177 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1178 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1179 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1180 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1181 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1182 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1183 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1184 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1185 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1186 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1187 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1188 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1189: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1190: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1191 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1192: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1193 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1194 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1195 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1196 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1197 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1198 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1199 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1200 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1201 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1202 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1203 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1204 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1205 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1206 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1207 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1208 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1209 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1210 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1211 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1212 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1213 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1214 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1215 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1216 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1217 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1218 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1219 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1220 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1221 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1222 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1223 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1224 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1225 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1226 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1227 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1228 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1229 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1230 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1231 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1232 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1233 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1234 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1235 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1236 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1237 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1238: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1239 LowGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1240 LowGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1241: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1242 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1243 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1244 LowGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1245 LowGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1246 LowGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1247 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1248 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1249 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1250 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1251 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1252 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1253 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1254 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1255 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1256 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1257 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1258 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1259 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1260 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1261 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1262 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1263 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1264 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1265 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1266 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1267 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1268 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1269 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1270 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1271 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1272 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1273 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1274 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1275: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1276 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1277 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1278 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1279 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1280 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1281 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1282 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1283 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1284 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1285 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1286 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1287 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1288 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1289 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1290 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1291 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1292 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1293 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1294 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1295 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1296 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1297 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1298 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1299 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1300 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1301 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1302 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1303 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1304 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1305 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1306 HighTM +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1307 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1308 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1309 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1310 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1311 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1312 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1313 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1314 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1315 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1316 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1317 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1318: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1319: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1320: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1321: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1322: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1323 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1324 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1325 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1326 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1327 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1328 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1329 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1330 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1331 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1332 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1333 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1334 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1335 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1336 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1337 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1338 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1339 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1340 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1341 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1342 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1343 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1344 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1345 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1346 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1347 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1348 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1349 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1350 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1351 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1352 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1353 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1354 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1355 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1356 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1357 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1358 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1359 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1360 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1361 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1362 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1363 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1364 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1365 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1366 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1367 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1368 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1369 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1370 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1371 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1372 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1373 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1374 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1375 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1376 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1377 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1378 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1379 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1380 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1381 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1382 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1383 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1384 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1385 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1386 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1387 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1388 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1389 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1390 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1391: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1392 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1393 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1394 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1395 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1396 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1397 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1398 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1399 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1400 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1401 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1402 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1403 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1404 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1405 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1406 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1407 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1408 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1409 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1410 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1411 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1412 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1413 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1414 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1415 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1416 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1417 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1418 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1419 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1420 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1421 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1422 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1423 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1424 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1425 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1426 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1427 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1428 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1429 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1430 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1431 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1432 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1433 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1434: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1435: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1436: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1437: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1438: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1439: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1440: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1441 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1442 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1443 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1444 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1445 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1446 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1447 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1448 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1449 LowGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1450 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1451 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1452 LowGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1453: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1454 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1455 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1456 LowGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1457: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1458: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1459: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1460: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1461: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1462: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1463 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1464 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1465 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1466 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1467 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1468 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1469 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1470 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1471 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1472 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1473 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1474 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1475 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1476 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1477 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1478 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1479 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1480 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1481 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1482 HighTM +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1483 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1484 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1485 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1486 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1487 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1488 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1489 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1490 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1491 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1492 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1493 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1494 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1495 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1496 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1497 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1498 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1499 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1500 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1501 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1502 HighTM +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1503 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1504 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1505 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1506 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1507 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1508 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1509 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1510 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1511 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1512 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1513 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1514 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1515 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1516 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1517 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1518 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1519 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1520 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1521 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1522 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1523 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1524 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1525 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1526 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1527 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1528 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1529 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1530 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1531 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1532 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1533 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1534 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1535 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1536 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1537 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1538 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1539 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1540 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1541 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1542 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1543 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1544 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1545 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1546 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1547 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1548 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1549 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1550 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1551 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1552 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1553 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1554 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1555 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1556 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1557 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1558 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1559 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1560 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1561: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1562 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1563 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1564 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1565 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1566 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1567 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1568 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1569 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1570 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1571 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1572 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1573 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1574 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1575 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1576 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1577 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1578 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1579 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1580 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1581 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1582 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1583 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1584: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1585 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1586 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1587 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1588 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1589 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1590 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1591 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1592 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1593 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1594 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1595 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1596 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1597 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1598 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1599 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1600 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1601 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1602 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1603 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1604 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1605 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1606 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1607 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1608 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1609 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1610 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1611 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1612 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1613 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1614 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1615 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1616: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1617: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1618: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1619 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1620 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1621 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1622 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1623 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1624 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1625 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1626 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1627 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1628 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1629 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1630 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1631 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1632 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1633 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1634 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1635 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1636 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1637 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1638 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1639 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1640 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1641 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1642 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1643 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1644 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1645 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1646 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1647 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1648 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1649 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1650 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1651 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1652 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1653 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1654 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1655 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1656 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1657 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1658 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1659 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1660 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1661 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1662 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1663 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1664 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1665 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1666 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1667 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1668 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1669 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1670 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1671 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1672 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1673 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1674 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1675 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1676: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1677 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1678 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1679 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1680 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1681 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1682 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1683 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1684: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1685 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1686 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1687 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1688 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1689 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1690 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1691: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1692: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1693 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1694 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1695 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1696 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1697 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1698 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1699 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1700 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1701 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1702 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1703 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1704 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1705 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1706 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1707 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1708 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1709 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1710 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1711 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1712 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1713 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1714 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1715 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1716 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1717 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1718 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1719 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1720 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1721 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1722 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1723 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1724 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1725 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1726 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1727 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1728 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1729 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1730 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1731 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1732 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1733 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1734 HighTM +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1735 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1736 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1737 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1738 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1739 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1740 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1741 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1742 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1743 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1744 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1745 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1746 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1747 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1748 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1749 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1750 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1751 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1752 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1753 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1754 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1755 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1756 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1757 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1758 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1759 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1760 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1761 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1762 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1763 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1764 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1765 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1766 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1767 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1768 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1769 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1770 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1771 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1772 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1773 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1774: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1775 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1776 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1777: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1778: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1779: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1780 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1781 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1782 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1783 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1784 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1785 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1786 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1787 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1788 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1789 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1790 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1791 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1792 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1793 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1794 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1795 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1796 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1797 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1798 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1799 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1800 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1801 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1802 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1803 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1804 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1805 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1806 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1807 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1808 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1809 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1810 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1811 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1812 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1813 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1814 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1815 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1816 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1817 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1818 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1819 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1820 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1821 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1822 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1823 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1824 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1825 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1826 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1827 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1828 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1829 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1830 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1831 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1832 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1833 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1834 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1835 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1836 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1837 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1838 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1839 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1840: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1841 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1842 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1843 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1844 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1845 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1846 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1847 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1848 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1849 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1850 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1851 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1852 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1853 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1854 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1855 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1856 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1857 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1858 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1859 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1860 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1861 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1862 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1863 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1864 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1865 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1866 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1867: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1868 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1869 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1870 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1871 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1872 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1873 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1874 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1875 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1876 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1877 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1878 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1879 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1880 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1881 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1882 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1883 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1884 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1885 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1886 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1887 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1888 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1889 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1890 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1891 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1892 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1893 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1894 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1895 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1896 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1897 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1898 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1899 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1900 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1901 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1902 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1903 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1904 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1905 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1906 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1907 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1908 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1909 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1910 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1911 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1912 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1913 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1914 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1915 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1916 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1917 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1918 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1919 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1920 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1921 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1922 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1923 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1924 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1925 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1926 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1927 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1928 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1929: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1930 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1931 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1932 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1933: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1934: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1935 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1936 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1937 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1938 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1939 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1940 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1941 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1942 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1943 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1944 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1945 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1946 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1947 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1948 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1949 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1950 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1951 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1952 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1953 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1954 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1955 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1956 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1957 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1958 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1959 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1960 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1961 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1962 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1963 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1964 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1965 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1966: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1967: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1968: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1969: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1970 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1971 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1972 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1973 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1974 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1975 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1976 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1977 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1978 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1979 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1980 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1981 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1982 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1983 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1984 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1985 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1986 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1987 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1988 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1989 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1990 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1991 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1992 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1993 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1994 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1995 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1996 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1997 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1998 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 1999 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2000 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2001 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2002 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2003 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2004 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2005 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2006 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2007 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2008 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2009 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2010 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2011 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2012 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2013 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2014 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2015 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2016 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2017 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2018 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2019 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2020 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2021 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2022 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2023 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2024 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2025 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2026 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2027 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2028 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2029 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2030 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2031 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2032 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2033 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2034 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2035 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2036 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2037 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2038 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2039 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2040 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2041 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2042 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2043 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2044 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2045: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2046 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2047 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2048 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2049 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2050 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2051 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2052 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2053 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2054 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2055 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2056 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2057 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2058 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2059 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2060 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2061 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2062 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2063 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2064 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2065 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2066 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2067 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2068 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2069 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2070: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2071: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2072: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2073: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2074: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2075: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2076: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2077: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2078: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2079: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2080 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2081 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2082 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2083 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2084 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2085 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2086 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2087 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2088 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2089 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2090 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2091 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2092 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2093 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2094 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2095 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2096 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2097 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2098 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2099 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2100 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2101 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2102 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2103 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2104 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2105 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2106 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2107 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2108 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2109 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2110 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2111 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2112 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2113 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2114 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2115 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2116 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2117 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2118 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2119 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2120 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2121 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2122 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2123 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2124 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2125 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2126 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2127 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2128 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2129 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2130 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2131 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2132 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2133 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2134 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2135 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2136 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2137 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2138 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2139 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2140 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2141 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2142 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2143 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2144 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2145 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2146 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2147 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2148 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2149 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2150 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2151 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2152 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2153 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2154 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2155 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2156 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2157 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2158 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2159: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2160: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2161 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2162 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2163 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2164 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2165 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2166 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2167 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2168 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2169 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2170 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2171 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2172 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2173 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2174 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2175 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2176 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2177 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2178 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2179 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2180 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2181 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2182 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2183 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2184 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2185 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2186 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2187 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2188 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2189 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2190 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2191 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2192 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2193 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2194: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2195: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2196 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2197: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2198: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2199: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2200: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2201: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2202: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2203: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2204: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2205: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2206: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2207: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2208: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2209: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2210: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2211: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2212: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2213: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2214: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2215 DimerFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2216 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2217 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2218 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2219 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2220 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2221 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2222 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2223 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2224 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2225 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2226 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2227 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2228 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2229 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2230 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2231 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2232 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2233 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2234 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2235 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2236 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2237 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2238 HairpinFail +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2239 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2240 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2241 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2242 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2243 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2244 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2245 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2246 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2247 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2248 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2249 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2250 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2251 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2252 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2253 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2254 MaxHomopoly +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2255 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2256 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2257 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2258 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2259 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2260 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2261 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2262 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2263 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2264 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2265 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2266 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2267 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2268 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2269 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2270 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2271 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2272 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2273 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2274 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2275 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2276 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2277 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2278 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2279 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2280 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2281 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2282 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2283 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2284 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2285 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2286 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2287 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2288 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2289 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2290: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2291: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2292 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2293 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2294 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2295 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2296 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2297: AllPass +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2298 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2299 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2300 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2301 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2302 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2303 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2304 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2305 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2306 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2307 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2308 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2309 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2310 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2311 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2312 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2313 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2314 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2315 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2316 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2317 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2318 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2319 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2320 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2321 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2322 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2323 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2324 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2325 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2326 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2327 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2328 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2329 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2330 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2331 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2332 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2333 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2334 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2335 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2336 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2337 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2338 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2339 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2340 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2341 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2342 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2343 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2344 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2345 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2346 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2347 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2348 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2349 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2350 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2351 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2352 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2353 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2354 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2355 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2356 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2357 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2358 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2359 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2360 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2361 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2362 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2363 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2364 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2365 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2366 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2367 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2368 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2369 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2370 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2371 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2372 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2373 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2374 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2375 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2376 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2377 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2378 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2379 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2380 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2381 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2382 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2383 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2384 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2385 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2386 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2387 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2388 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2389 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2390 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2391 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2392 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2393 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2394 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2395 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2396 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2397 HighGC +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2398 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2399 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2400 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2401 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2402 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2403 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2404 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2405 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2406 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2407 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2408 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2409 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2410 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2411 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2412 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2413 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2414 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2415 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2416 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2417 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2418 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2419 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2420 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2421 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2422 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2423 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2424 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2425 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2426 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2427 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2428 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2429 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2430 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2431 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2432 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2433 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2434 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2435 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2436 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2437 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2438 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2439 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2440 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2441 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2442 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2443 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2444 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2445 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2446 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2447 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2448 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2449 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2450 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2451 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2452 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2453 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2454 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2455 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2456 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2457 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2458 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2459 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2460 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2461 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2462 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2463 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2464 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2465 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2466 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2467 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2468 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2469 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2470 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2471 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2472 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2473 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2474 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2475 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2476 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2477 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2478 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2479 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2480 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2481 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2482 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2483 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2484 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2485 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2486 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2487 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2488 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2489 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2490 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2491 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2492 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2493 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2494 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2495 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2496 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2497 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2498 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2499 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2500 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2501 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2502 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2503 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2504 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2505 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2506 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2507 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2508 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2509 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2510 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2511 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2512 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2513 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2514 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2515 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2516 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2517 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2518 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2519 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2520 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2521 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2522 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2523 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2524 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2525 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2526 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2527 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2528 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2529 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2530 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2531 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2532 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2533 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2534 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2535 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2536 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2537 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2538 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2539 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2540 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2541 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2542 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2543 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2544 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2545 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2546 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2547 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2548 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2549 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2550 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2551 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2552 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2553 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2554 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2555 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2556 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2557 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2558 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2559 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2560 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2561 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2562 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2563 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2564 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2565 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2566 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2567 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2568 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2569 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2570 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2571 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2572 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2573 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2574 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2575 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2576 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2577 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2578 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2579 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2580 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2581 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2582 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2583 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2584 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2585 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2586 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2587 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2588 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2589 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2590 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2591 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2592 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2593 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2594 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2595 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2596 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2597 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2598 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2599 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2600 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2601 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2602 GapOnSetBase +2024-02-28 at 17:47:53 | DEBUG | RKmer: 2603 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2604 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2605 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2606 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2607 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2608 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2609 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2610 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2611 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2612 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2613 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2614 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2615 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2616 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2617 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2618 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2619 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2620 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2621 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2622 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2623 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2624 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2625 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2626 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2627 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2628 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2629 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2630 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2631 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2632 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2633 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2634 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2635 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2636 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2637 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2638 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2639 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2640 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2641 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2642 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2643 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2644 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2645 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2646 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2647 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2648 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2649 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2650 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2651 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2652 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2653 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2654 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2655 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2656 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2657 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2658 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2659 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2660 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2661 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2662 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2663 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2664 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2665 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2666 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2667 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2668 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2669 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2670 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2671 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2672 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2673 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2674 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2675 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2676 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2677 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2678 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2679 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2680 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2681 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2682 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2683 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2684 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2685 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2686 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2687 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2688 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2689 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2690 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2691 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2692 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2693 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2694 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2695 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2696 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2697 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2698 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2699 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2700 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2701 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2702 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2703 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2704 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2705 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2706 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2707 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2708 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2709 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2710 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2711 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2712 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2713 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2714 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2715 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2716 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2717 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2718 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2719 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2720 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2721 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2722 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2723 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2724 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2725 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2726 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2727 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2728 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2729 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2730 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2731 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2732 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2733 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2734 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2735 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2736 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2737 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2738 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2739 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2740 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2741 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2742 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2743 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2744 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2745 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2746 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2747 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2748 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2749 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2750 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2751 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2752 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2753 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2754 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2755 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2756 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2757 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2758 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2759 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2760 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2761 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2762 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2763 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2764 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2765 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2766 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2767 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2768 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2769 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2770 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2771 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2772 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2773 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2774 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2775 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2776 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2777 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2778 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2779 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2780 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2781 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2782 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2783 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2784 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2785 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2786 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2787 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2788 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2789 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2790 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2791 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2792 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2793: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2794: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2795: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2796: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2797: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2798: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2799 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2800 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2801 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2802 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2803 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2804 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2805 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2806 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2807 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2808 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2809 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2810 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2811 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2812 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2813 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2814 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2815 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2816 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2817 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2818 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2819 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2820 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2821 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2822 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2823 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2824 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2825 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2826 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2827 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2828 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2829 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2830 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2831 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2832 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2833 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2834 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2835 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2836 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2837 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2838 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2839 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2840 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2841 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2842 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2843 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2844 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2845 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2846 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2847 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2848 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2849 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2850 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2851 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2852 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2853 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2854 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2855 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2856 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2857 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2858 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2859 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2860 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2861 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2862 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2863 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2864 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2865 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2866 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2867 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2868 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2869 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2870 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2871 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2872 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2873 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2874 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2875 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2876 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2877 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2878 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2879 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2880 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2881 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2882 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2883 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2884 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2885 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2886 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2887 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2888 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2889 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2890 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2891 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2892 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2893 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2894 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2895 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2896 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2897 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2898 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2899 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2900 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2901 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2902 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2903 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2904 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2905 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2906 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2907 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2908 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2909 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2910 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2911 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2912 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2913 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2914 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2915 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2916 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2917 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2918 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2919 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2920 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2921 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2922 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2923 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2924 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2925 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2926 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2927 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2928 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2929 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2930 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2931 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2932 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2933 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2934 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2935 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2936 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2937 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2938 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2939 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2940 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2941 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2942 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2943 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2944 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2945: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2946: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2947 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2948 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2949 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2950 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2951 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2952 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2953 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2954 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2955 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2956 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2957 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2958 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2959 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2960 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2961 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2962 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2963 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2964 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2965 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2966 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2967 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2968 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2969 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2970 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2971 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2972 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2973 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2974 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2975 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2976 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2977 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2978 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2979 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2980 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2981 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2982 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2983 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2984 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2985 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2986 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2987 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2988 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2989 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2990: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2991: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2992: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2993: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2994 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2995 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2996 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2997: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2998: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 2999 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3000 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3001 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3002 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3003 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3004 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3005 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3006 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3007 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3008 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3009 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3010 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3011 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3012 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3013 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3014 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3015 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3016: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3017: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3018 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3019 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3020 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3021 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3022 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3023 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3024 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3025 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3026 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3027: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3028: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3029: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3030: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3031: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3032: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3033 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3034 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3035 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3036 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3037 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3038 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3039 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3040 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3041 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3042 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3043 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3044 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3045 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3046: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3047: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3048 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3049 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3050 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3051 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3052 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3053 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3054 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3055 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3056 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3057 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3058 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3059 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3060 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3061 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3062 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3063 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3064 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3065 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3066 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3067 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3068 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3069 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3070 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3071 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3072 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3073 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3074 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3075 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3076 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3077 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3078 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3079 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3080 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3081 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3082 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3083: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3084: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3085: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3086: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3087: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3088 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3089 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3090 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3091 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3092 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3093 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3094 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3095 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3096 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3097 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3098 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3099 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3100 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3101 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3102 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3103 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3104 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3105 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3106 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3107 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3108 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3109 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3110 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3111 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3112 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3113 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3114 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3115 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3116 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3117: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3118: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3119: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3120: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3121 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3122 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3123 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3124 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3125 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3126 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3127: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3128: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3129: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3130: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3131: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3132 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3133: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3134: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3135: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3136: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3137: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3138: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3139: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3140: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3141 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3142 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3143 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3144 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3145 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3146 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3147 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3148 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3149 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3150 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3151 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3152 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3153 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3154 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3155 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3156 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3157 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3158 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3159 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3160 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3161 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3162 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3163 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3164: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3165: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3166: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3167: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3168: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3169: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3170: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3171: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3172 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3173 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3174 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3175 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3176 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3177 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3178 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3179 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3180 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3181 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3182 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3183 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3184 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3185 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3186 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3187 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3188 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3189 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3190 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3191 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3192 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3193 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3194 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3195 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3196 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3197 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3198 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3199 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3200 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3201 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3202 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3203 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3204 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3205 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3206 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3207 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3208 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3209 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3210 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3211 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3212 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3213 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3214 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3215 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3216 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3217 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3218 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3219 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3220 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3221 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3222 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3223 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3224 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3225 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3226 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3227 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3228 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3229 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3230 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3231 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3232 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3233 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3234 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3235 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3236 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3237 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3238 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3239 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3240: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3241 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3242: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3243: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3244 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3245 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3246 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3247 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3248 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3249 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3250 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3251 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3252 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3253 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3254 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3255 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3256 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3257 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3258 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3259 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3260 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3261 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3262 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3263 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3264 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3265 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3266 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3267 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3268 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3269 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3270 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3271 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3272 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3273 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3274 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3275 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3276 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3277 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3278 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3279 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3280 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3281 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3282 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3283 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3284 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3285 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3286 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3287 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3288 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3289 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3290 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3291 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3292 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3293 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3294 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3295 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3296 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3297: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3298 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3299: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3300: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3301: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3302 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3303 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3304 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3305 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3306 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3307 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3308 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3309 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3310 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3311 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3312 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3313 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3314 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3315 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3316 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3317 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3318 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3319 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3320 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3321 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3322 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3323 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3324 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3325 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3326 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3327 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3328 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3329 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3330 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3331 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3332 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3333 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3334 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3335 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3336 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3337 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3338 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3339 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3340 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3341 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3342 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3343 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3344 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3345 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3346 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3347 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3348 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3349 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3350 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3351 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3352 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3353 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3354 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3355 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3356 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3357 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3358 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3359 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3360 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3361 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3362 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3363 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3364 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3365 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3366 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3367 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3368: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3369: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3370: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3371 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3372: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3373: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3374: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3375 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3376: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3377: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3378: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3379: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3380: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3381: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3382 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3383 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3384 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3385 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3386 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3387 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3388 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3389 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3390 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3391 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3392 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3393 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3394 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3395 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3396 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3397 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3398 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3399 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3400 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3401 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3402 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3403 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3404 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3405 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3406 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3407 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3408 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3409 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3410 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3411 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3412 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3413 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3414 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3415 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3416 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3417 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3418 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3419 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3420 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3421 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3422 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3423 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3424 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3425 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3426 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3427 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3428 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3429 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3430 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3431 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3432 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3433 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3434 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3435 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3436 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3437 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3438 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3439 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3440 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3441 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3442 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3443 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3444 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3445 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3446 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3447 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3448 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3449 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3450 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3451 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3452 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3453 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3454 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3455 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3456 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3457 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3458 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3459 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3460 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3461 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3462 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3463 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3464 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3465 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3466 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3467 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3468 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3469 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3470 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3471 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3472 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3473 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3474 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3475 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3476 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3477 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3478 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3479 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3480 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3481 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3482 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3483 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3484 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3485 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3486 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3487 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3488 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3489 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3490 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3491 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3492 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3493 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3494 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3495 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3496 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3497 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3498 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3499 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3500 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3501 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3502 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3503 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3504 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3505 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3506 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3507 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3508 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3509 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3510 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3511 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3512 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3513 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3514 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3515 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3516 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3517 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3518 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3519 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3520 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3521 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3522 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3523 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3524 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3525 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3526 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3527 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3528 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3529 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3530 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3531 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3532 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3533 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3534 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3535 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3536 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3537 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3538 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3539 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3540 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3541 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3542 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3543 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3544 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3545 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3546 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3547 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3548 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3549 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3550 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3551 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3552 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3553 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3554 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3555 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3556 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3557 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3558 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3559 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3560 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3561 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3562 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3563 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3564 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3565 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3566 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3567 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3568 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3569 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3570 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3571 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3572 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3573 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3574 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3575 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3576 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3577 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3578 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3579 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3580: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3581: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3582: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3583: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3584: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3585: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3586: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3587 HighTM +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3588 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3589 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3590 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3591 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3592 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3593 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3594 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3595 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3596 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3597 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3598 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3599 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3600 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3601 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3602 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3603 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3604 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3605 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3606 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3607 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3608 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3609 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3610 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3611 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3612 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3613 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3614 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3615 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3616 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3617 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3618 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3619 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3620 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3621 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3622 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3623 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3624 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3625 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3626 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3627: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3628: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3629: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3630 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3631: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3632: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3633 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3634 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3635 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3636 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3637 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3638 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3639 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3640 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3641 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3642 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3643 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3644 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3645 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3646 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3647 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3648 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3649 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3650 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3651 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3652 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3653 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3654 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3655 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3656 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3657 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3658 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3659 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3660 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3661 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3662 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3663 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3664 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3665 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3666 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3667 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3668 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3669 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3670 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3671 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3672 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3673 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3674 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3675 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3676 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3677 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3678 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3679 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3680 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3681 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3682 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3683 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3684 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3685 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3686 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3687 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3688 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3689: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3690: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3691: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3692: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3693 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3694 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3695: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3696: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3697 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3698 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3699 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3700 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3701 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3702 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3703 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3704 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3705: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3706 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3707: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3708: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3709 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3710 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3711 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3712 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3713 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3714 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3715 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3716 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3717 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3718 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3719 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3720 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3721 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3722 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3723 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3724 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3725 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3726 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3727 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3728 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3729 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3730 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3731 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3732 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3733 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3734 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3735 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3736 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3737 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3738 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3739 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3740 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3741 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3742 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3743 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3744 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3745 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3746 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3747 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3748 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3749: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3750: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3751: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3752: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3753 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3754: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3755 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3756 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3757 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3758 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3759 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3760 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3761: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3762: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3763: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3764: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3765: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3766: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3767: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3768: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3769: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3770: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3771: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3772: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3773: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3774: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3775: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3776 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3777 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3778 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3779 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3780 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3781 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3782 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3783 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3784 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3785 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3786 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3787 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3788 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3789 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3790 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3791 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3792 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3793 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3794 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3795 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3796 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3797 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3798 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3799 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3800 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3801 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3802 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3803 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3804 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3805 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3806 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3807 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3808 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3809 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3810 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3811 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3812 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3813 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3814 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3815 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3816 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3817 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3818 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3819 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3820 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3821 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3822 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3823 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3824 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3825 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3826 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3827 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3828 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3829 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3830 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3831 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3832 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3833 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3834: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3835: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3836: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3837: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3838: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3839: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3840: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3841 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3842 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3843: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3844: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3845 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3846 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3847 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3848 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3849 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3850 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3851 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3852 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3853 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3854 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3855 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3856 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3857 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3858 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3859 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3860 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3861 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3862 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3863 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3864 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3865 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3866 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3867 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3868 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3869 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3870 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3871 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3872 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3873 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3874 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3875 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3876 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3877 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3878 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3879 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3880 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3881 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3882 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3883 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3884: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3885: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3886 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3887 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3888 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3889 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3890 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3891 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3892 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3893 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3894 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3895 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3896 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3897 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3898 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3899 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3900 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3901 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3902 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3903 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3904 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3905 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3906 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3907 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3908 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3909 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3910 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3911 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3912 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3913 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3914 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3915 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3916 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3917 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3918 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3919 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3920 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3921 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3922: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3923: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3924 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3925 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3926 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3927 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3928 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3929 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3930 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3931 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3932 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3933 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3934 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3935 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3936 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3937 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3938 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3939 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3940 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3941 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3942 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3943 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3944 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3945 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3946 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3947 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3948 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3949 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3950 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3951 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3952 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3953 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3954 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3955 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3956 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3957 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3958 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3959 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3960 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3961 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3962 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3963 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3964 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3965 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3966 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3967 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3968 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3969 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3970 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3971 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3972: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3973 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3974 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3975 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3976 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3977 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3978 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3979 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3980 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3981: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3982: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3983 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3984 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3985 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3986 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3987 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3988 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3989 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3990 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3991: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3992 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3993: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3994: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3995: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3996 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3997 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3998 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 3999 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4000 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4001 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4002 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4003 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4004 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4005 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4006 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4007 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4008 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4009 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4010 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4011 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4012 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4013 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4014 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4015 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4016 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4017 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4018 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4019 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4020 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4021 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4022 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4023 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4024 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4025 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4026 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4027 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4028 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4029 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4030 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4031 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4032 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4033 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4034 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4035 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4036 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4037 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4038 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4039 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4040 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4041 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4042 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4043 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4044 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4045 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4046 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4047 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4048 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4049 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4050 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4051 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4052 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4053 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4054 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4055 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4056 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4057 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4058 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4059 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4060 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4061 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4062 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4063 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4064 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4065 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4066 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4067 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4068 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4069 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4070 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4071 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4072 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4073 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4074 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4075 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4076 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4077 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4078 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4079 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4080 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4081 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4082 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4083 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4084 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4085 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4086 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4087 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4088 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4089 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4090 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4091 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4092 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4093 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4094 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4095 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4096 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4097 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4098 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4099 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4100 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4101 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4102 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4103 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4104 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4105 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4106 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4107: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4108: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4109: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4110: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4111: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4112: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4113: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4114: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4115: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4116: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4117: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4118: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4119: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4120 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4121 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4122 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4123 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4124 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4125 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4126 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4127 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4128 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4129 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4130 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4131 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4132 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4133 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4134 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4135 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4136: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4137: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4138: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4139: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4140: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4141 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4142 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4143 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4144 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4145: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4146 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4147 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4148 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4149 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4150 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4151 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4152 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4153 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4154 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4155 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4156 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4157 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4158 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4159 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4160 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4161 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4162 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4163 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4164 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4165 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4166 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4167 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4168 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4169 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4170 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4171 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4172 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4173 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4174 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4175 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4176 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4177 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4178 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4179 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4180 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4181 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4182 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4183 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4184 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4185 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4186: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4187 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4188 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4189: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4190: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4191 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4192 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4193 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4194 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4195 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4196 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4197 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4198 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4199 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4200 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4201 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4202 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4203 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4204 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4205 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4206 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4207 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4208 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4209 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4210 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4211 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4212 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4213 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4214 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4215 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4216 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4217 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4218 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4219 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4220 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4221 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4222 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4223 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4224 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4225: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4226: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4227: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4228: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4229: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4230: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4231: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4232: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4233 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4234 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4235 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4236 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4237 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4238 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4239 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4240 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4241 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4242 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4243 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4244 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4245 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4246 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4247 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4248 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4249 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4250 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4251 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4252 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4253: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4254: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4255: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4256: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4257: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4258: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4259: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4260: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4261: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4262: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4263: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4264: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4265: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4266 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4267 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4268 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4269 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4270 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4271 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4272 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4273 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4274 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4275 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4276 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4277 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4278 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4279 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4280 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4281 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4282 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4283 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4284 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4285 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4286 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4287 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4288 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4289 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4290 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4291 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4292 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4293 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4294 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4295 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4296: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4297: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4298: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4299: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4300: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4301: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4302: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4303: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4304: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4305: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4306: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4307: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4308 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4309 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4310 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4311 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4312 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4313 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4314 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4315 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4316 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4317 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4318 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4319 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4320 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4321 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4322: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4323: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4324 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4325 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4326 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4327 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4328 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4329 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4330 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4331 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4332 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4333 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4334 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4335 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4336 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4337 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4338: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4339: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4340: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4341: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4342 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4343 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4344 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4345 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4346 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4347 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4348 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4349 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4350 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4351 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4352 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4353 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4354 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4355 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4356 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4357 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4358 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4359 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4360 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4361 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4362 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4363 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4364 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4365 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4366 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4367 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4368 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4369 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4370 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4371 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4372 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4373 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4374 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4375 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4376 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4377 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4378 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4379 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4380 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4381 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4382 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4383 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4384 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4385 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4386 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4387 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4388 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4389 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4390 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4391 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4392 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4393 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4394 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4395 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4396 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4397 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4398 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4399 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4400 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4401 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4402 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4403 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4404 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4405 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4406 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4407 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4408 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4409 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4410 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4411 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4412 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4413 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4414 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4415 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4416 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4417 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4418 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4419 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4420 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4421 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4422 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4423 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4424 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4425 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4426 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4427 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4428 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4429 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4430 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4431 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4432 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4433 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4434 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4435 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4436 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4437 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4438 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4439 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4440 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4441 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4442 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4443 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4444 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4445 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4446 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4447 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4448 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4449 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4450 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4451 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4452 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4453 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4454 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4455 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4456 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4457 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4458 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4459 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4460 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4461 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4462 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4463 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4464 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4465 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4466 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4467 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4468 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4469 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4470 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4471 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4472 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4473 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4474 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4475 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4476 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4477 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4478 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4479 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4480 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4481 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4482 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4483 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4484 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4485 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4486 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4487: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4488: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4489: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4490 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4491 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4492 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4493 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4494 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4495 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4496 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4497 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4498 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4499 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4500 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4501 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4502 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4503 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4504 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4505 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4506 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4507 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4508 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4509 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4510 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4511: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4512: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4513: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4514: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4515: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4516: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4517: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4518: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4519: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4520: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4521: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4522: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4523: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4524: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4525: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4526: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4527: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4528: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4529 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4530: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4531 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4532: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4533: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4534 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4535 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4536 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4537 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4538 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4539 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4540 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4541 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4542 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4543 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4544 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4545: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4546: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4547 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4548 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4549 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4550 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4551 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4552 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4553: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4554 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4555 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4556 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4557: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4558: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4559: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4560 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4561 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4562 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4563 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4564 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4565 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4566 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4567 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4568 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4569 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4570 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4571 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4572 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4573 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4574 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4575 HighTM +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4576 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4577 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4578 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4579 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4580 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4581 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4582 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4583 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4584 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4585 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4586 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4587 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4588 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4589 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4590 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4591 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4592 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4593 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4594 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4595 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4596 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4597 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4598 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4599 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4600 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4601 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4602 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4603 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4604 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4605 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4606 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4607 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4608 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4609 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4610 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4611 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4612 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4613 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4614 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4615 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4616 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4617 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4618 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4619 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4620 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4621 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4622 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4623 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4624 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4625 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4626 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4627 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4628 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4629 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4630 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4631 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4632 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4633 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4634 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4635 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4636 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4637 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4638 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4639 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4640 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4641 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4642 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4643 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4644 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4645 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4646 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4647 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4648 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4649 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4650 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4651 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4652 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4653 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4654 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4655 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4656 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4657 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4658 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4659 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4660 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4661 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4662 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4663 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4664 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4665 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4666 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4667 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4668 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4669 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4670 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4671 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4672 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4673 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4674 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4675 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4676 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4677 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4678 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4679 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4680 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4681 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4682 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4683 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4684 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4685 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4686 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4687 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4688 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4689 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4690 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4691: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4692: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4693: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4694: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4695: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4696: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4697: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4698: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4699: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4700: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4701: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4702 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4703 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4704 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4705 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4706 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4707 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4708 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4709 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4710 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4711 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4712 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4713 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4714 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4715 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4716 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4717 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4718 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4719 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4720 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4721 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4722 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4723 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4724 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4725 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4726 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4727 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4728 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4729 HighTM +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4730 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4731 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4732 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4733 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4734 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4735 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4736 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4737 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4738 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4739 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4740 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4741 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4742 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4743 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4744 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4745 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4746 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4747 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4748 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4749 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4750 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4751 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4752 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4753 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4754 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4755 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4756 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4757 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4758 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4759 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4760 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4761 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4762 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4763 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4764 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4765 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4766 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4767 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4768 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4769 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4770 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4771 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4772 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4773 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4774 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4775 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4776 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4777 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4778 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4779 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4780 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4781 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4782 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4783 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4784 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4785 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4786 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4787 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4788 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4789 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4790 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4791 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4792 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4793 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4794 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4795 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4796 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4797 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4798 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4799 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4800 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4801: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4802: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4803 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4804 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4805 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4806 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4807 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4808 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4809 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4810 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4811 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4812: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4813 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4814 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4815 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4816 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4817 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4818 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4819 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4820 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4821 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4822 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4823 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4824 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4825 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4826: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4827: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4828: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4829: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4830: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4831 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4832 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4833 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4834 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4835 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4836 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4837 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4838 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4839 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4840 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4841 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4842 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4843 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4844 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4845 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4846 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4847 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4848 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4849 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4850 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4851 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4852 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4853 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4854 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4855 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4856 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4857 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4858 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4859 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4860 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4861 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4862 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4863 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4864 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4865 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4866 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4867 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4868 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4869 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4870 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4871 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4872 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4873 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4874 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4875 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4876 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4877 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4878 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4879 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4880 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4881 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4882 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4883 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4884 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4885 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4886 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4887 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4888 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4889 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4890 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4891 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4892 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4893 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4894 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4895 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4896 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4897 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4898 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4899: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4900: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4901: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4902: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4903: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4904: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4905: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4906: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4907: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4908: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4909: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4910: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4911: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4912: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4913: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4914: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4915 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4916 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4917 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4918 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4919: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4920: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4921: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4922 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4923 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4924 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4925 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4926 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4927 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4928 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4929 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4930 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4931 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4932 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4933 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4934 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4935 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4936 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4937 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4938 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4939 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4940 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4941 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4942 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4943 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4944 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4945 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4946 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4947 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4948 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4949 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4950 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4951 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4952 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4953 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4954 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4955 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4956 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4957 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4958 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4959 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4960 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4961 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4962: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4963 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4964 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4965 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4966 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4967 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4968 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4969 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4970 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4971 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4972 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4973 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4974 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4975 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4976: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4977: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4978 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4979 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4980 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4981 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4982 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4983 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4984 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4985 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4986 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4987 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4988 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4989 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4990 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4991 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4992 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4993 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4994 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4995 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4996 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4997 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4998 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 4999 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5000 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5001 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5002 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5003: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5004: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5005: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5006: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5007: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5008 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5009 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5010 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5011 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5012: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5013: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5014: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5015 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5016: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5017: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5018: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5019: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5020: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5021: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5022: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5023 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5024 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5025 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5026 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5027 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5028 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5029 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5030 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5031 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5032 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5033 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5034 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5035 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5036 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5037 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5038 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5039 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5040 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5041 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5042 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5043 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5044 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5045 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5046 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5047 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5048 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5049 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5050 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5051 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5052 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5053 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5054 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5055 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5056 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5057 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5058 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5059 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5060 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5061 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5062 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5063: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5064: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5065: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5066 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5067: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5068: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5069: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5070: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5071: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5072: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5073 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5074 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5075 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5076 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5077 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5078: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5079: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5080: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5081 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5082 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5083 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5084 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5085 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5086 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5087 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5088 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5089 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5090 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5091 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5092 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5093 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5094 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5095 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5096 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5097 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5098 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5099 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5100 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5101 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5102 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5103 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5104 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5105 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5106: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5107: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5108: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5109: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5110: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5111 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5112 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5113 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5114 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5115 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5116 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5117 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5118 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5119 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5120 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5121 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5122 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5123 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5124 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5125 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5126 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5127 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5128 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5129 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5130 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5131 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5132 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5133 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5134 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5135 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5136 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5137 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5138 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5139 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5140 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5141 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5142 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5143 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5144 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5145 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5146 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5147 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5148 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5149 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5150 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5151 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5152 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5153 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5154 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5155 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5156 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5157 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5158 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5159 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5160 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5161 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5162 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5163 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5164 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5165 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5166 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5167 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5168: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5169: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5170 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5171 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5172 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5173 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5174 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5175 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5176 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5177 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5178 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5179 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5180 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5181 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5182 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5183 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5184 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5185 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5186 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5187 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5188 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5189 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5190 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5191 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5192 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5193 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5194 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5195 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5196 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5197 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5198 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5199 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5200 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5201 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5202 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5203 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5204 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5205 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5206 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5207 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5208 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5209 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5210: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5211: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5212: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5213 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5214 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5215 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5216 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5217 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5218 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5219 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5220 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5221 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5222 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5223 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5224 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5225 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5226 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5227 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5228 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5229 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5230 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5231 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5232 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5233 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5234 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5235 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5236 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5237 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5238 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5239 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5240 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5241 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5242 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5243 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5244 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5245 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5246 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5247 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5248 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5249 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5250 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5251 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5252 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5253: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5254: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5255: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5256: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5257: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5258: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5259 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5260 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5261 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5262: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5263: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5264: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5265: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5266: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5267: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5268: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5269: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5270: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5271 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5272 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5273 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5274 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5275 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5276: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5277: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5278: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5279 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5280 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5281 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5282 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5283 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5284 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5285 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5286 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5287 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5288 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5289 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5290 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5291 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5292 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5293 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5294 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5295 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5296 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5297: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5298: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5299: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5300: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5301 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5302: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5303: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5304: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5305: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5306: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5307: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5308: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5309: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5310 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5311: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5312: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5313: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5314: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5315: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5316: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5317 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5318 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5319 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5320 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5321 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5322 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5323 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5324 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5325 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5326 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5327 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5328 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5329 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5330 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5331 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5332 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5333 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5334 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5335: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5336: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5337 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5338 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5339 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5340 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5341 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5342 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5343 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5344 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5345 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5346 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5347 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5348 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5349 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5350 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5351 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5352 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5353 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5354 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5355 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5356 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5357 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5358 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5359 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5360 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5361 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5362 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5363 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5364 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5365 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5366 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5367 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5368 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5369 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5370 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5371 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5372 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5373 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5374 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5375 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5376 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5377 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5378 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5379 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5380 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5381 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5382 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5383 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5384 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5385 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5386 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5387 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5388 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5389 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5390 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5391 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5392 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5393 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5394 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5395 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5396 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5397 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5398 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5399 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5400 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5401 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5402 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5403 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5404 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5405 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5406 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5407 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5408 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5409 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5410 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5411 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5412: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5413: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5414: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5415: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5416: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5417: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5418: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5419 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5420 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5421 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5422 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5423 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5424 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5425 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5426 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5427 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5428 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5429 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5430 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5431 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5432 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5433 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5434 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5435 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5436 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5437: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5438: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5439: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5440: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5441: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5442: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5443: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5444: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5445: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5446: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5447: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5448: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5449: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5450: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5451 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5452 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5453: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5454: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5455: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5456: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5457 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5458 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5459 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5460 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5461 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5462 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5463 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5464 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5465 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5466 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5467 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5468 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5469 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5470 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5471 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5472 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5473 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5474 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5475 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5476 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5477 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5478 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5479 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5480 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5481: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5482: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5483: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5484: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5485: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5486: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5487: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5488 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5489: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5490 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5491 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5492 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5493 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5494 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5495 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5496 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5497 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5498 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5499 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5500 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5501 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5502 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5503 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5504 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5505: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5506 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5507 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5508 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5509 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5510 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5511 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5512 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5513 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5514 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5515: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5516: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5517: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5518: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5519: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5520: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5521: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5522: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5523 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5524 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5525 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5526 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5527 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5528: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5529: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5530: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5531: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5532: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5533 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5534: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5535: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5536: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5537: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5538 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5539 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5540 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5541 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5542 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5543 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5544 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5545 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5546 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5547 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5548 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5549 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5550 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5551 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5552 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5553 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5554 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5555 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5556 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5557 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5558 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5559 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5560 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5561 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5562 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5563 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5564 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5565 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5566 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5567 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5568 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5569 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5570: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5571 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5572 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5573 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5574 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5575 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5576 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5577 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5578 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5579 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5580 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5581 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5582 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5583 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5584 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5585 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5586 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5587 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5588 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5589 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5590 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5591: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5592: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5593: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5594: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5595 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5596 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5597 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5598 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5599 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5600 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5601 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5602 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5603 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5604 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5605 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5606 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5607 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5608 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5609 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5610 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5611 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5612 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5613 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5614 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5615 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5616 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5617 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5618 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5619 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5620 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5621 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5622 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5623 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5624 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5625 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5626 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5627 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5628 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5629 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5630 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5631 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5632: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5633: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5634: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5635: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5636: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5637: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5638 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5639 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5640 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5641 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5642 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5643 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5644 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5645 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5646 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5647 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5648 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5649 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5650 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5651 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5652 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5653 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5654 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5655 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5656 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5657 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5658 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5659 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5660 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5661 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5662 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5663 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5664 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5665 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5666 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5667 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5668 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5669 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5670 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5671 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5672 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5673 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5674 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5675 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5676 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5677 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5678 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5679 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5680 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5681 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5682 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5683 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5684 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5685 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5686 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5687 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5688 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5689 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5690 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5691 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5692 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5693 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5694 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5695 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5696 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5697 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5698 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5699 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5700 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5701: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5702: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5703: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5704: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5705: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5706: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5707 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5708 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5709 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5710 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5711 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5712 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5713 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5714 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5715 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5716 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5717 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5718 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5719 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5720 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5721 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5722 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5723 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5724 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5725 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5726 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5727 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5728 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5729 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5730 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5731 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5732 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5733 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5734 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5735 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5736 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5737 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5738 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5739 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5740 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5741 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5742 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5743 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5744 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5745 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5746 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5747 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5748 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5749 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5750: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5751: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5752: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5753: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5754: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5755: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5756: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5757: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5758: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5759: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5760: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5761: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5762: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5763: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5764 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5765 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5766 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5767 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5768 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5769 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5770 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5771 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5772 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5773 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5774: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5775: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5776: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5777: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5778: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5779: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5780 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5781: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5782: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5783: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5784 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5785 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5786 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5787 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5788 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5789 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5790 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5791 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5792 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5793 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5794 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5795: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5796: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5797: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5798: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5799: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5800: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5801: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5802: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5803: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5804: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5805 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5806 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5807: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5808 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5809 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5810 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5811 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5812 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5813 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5814 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5815 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5816 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5817 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5818 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5819 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5820 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5821 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5822 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5823 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5824 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5825 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5826 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5827 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5828 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5829 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5830 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5831 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5832 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5833 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5834 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5835 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5836 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5837 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5838 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5839 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5840 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5841 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5842 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5843 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5844 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5845 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5846 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5847 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5848 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5849 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5850 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5851 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5852 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5853 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5854 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5855 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5856 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5857 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5858 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5859 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5860 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5861 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5862 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5863 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5864 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5865 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5866 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5867 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5868 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5869 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5870 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5871 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5872 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5873 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5874 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5875 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5876 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5877 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5878 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5879 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5880 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5881 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5882 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5883 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5884 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5885 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5886 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5887 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5888 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5889 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5890 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5891 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5892 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5893 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5894: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5895: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5896: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5897: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5898: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5899: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5900: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5901: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5902: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5903: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5904: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5905 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5906 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5907 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5908 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5909 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5910 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5911 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5912 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5913 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5914 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5915 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5916 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5917 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5918 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5919 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5920 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5921 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5922: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5923: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5924: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5925: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5926: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5927: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5928: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5929: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5930: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5931: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5932: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5933 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5934 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5935 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5936 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5937 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5938 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5939 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5940 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5941 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5942 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5943 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5944 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5945 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5946 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5947 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5948: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5949: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5950: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5951: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5952: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5953: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5954: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5955: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5956 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5957: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5958: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5959: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5960: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5961: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5962 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5963 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5964 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5965 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5966 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5967 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5968 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5969 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5970 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5971 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5972 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5973 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5974 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5975 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5976 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5977 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5978 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5979 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5980 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5981 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5982 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5983 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5984 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5985 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5986 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5987 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5988 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5989 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5990 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5991 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5992 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5993 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5994 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5995 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5996 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5997 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5998 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 5999 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6000 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6001 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6002 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6003 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6004 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6005 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6006 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6007 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6008 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6009 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6010 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6011 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6012 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6013 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6014 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6015 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6016 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6017 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6018 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6019 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6020 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6021 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6022 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6023 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6024 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6025 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6026 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6027 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6028 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6029 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6030 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6031 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6032 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6033 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6034 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6035 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6036 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6037 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6038: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6039: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6040: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6041 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6042: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6043: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6044: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6045: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6046 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6047 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6048 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6049 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6050 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6051 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6052 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6053 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6054 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6055 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6056 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6057 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6058: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6059: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6060: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6061: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6062: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6063: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6064: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6065: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6066 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6067 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6068 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6069 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6070 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6071 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6072 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6073 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6074 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6075 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6076 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6077 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6078 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6079 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6080 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6081 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6082 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6083 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6084 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6085 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6086 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6087 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6088 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6089 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6090 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6091 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6092 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6093 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6094 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6095 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6096 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6097 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6098 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6099 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6100 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6101 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6102 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6103 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6104 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6105 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6106 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6107 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6108 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6109 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6110 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6111 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6112 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6113 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6114 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6115 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6116 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6117 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6118 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6119 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6120 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6121 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6122 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6123 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6124 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6125 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6126 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6127 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6128 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6129 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6130 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6131 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6132 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6133 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6134 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6135 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6136 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6137 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6138 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6139 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6140 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6141 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6142 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6143 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6144 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6145 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6146 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6147 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6148 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6149 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6150 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6151 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6152 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6153 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6154 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6155 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6156 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6157 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6158 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6159 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6160 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6161 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6162 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6163 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6164 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6165 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6166 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6167 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6168 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6169 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6170 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6171 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6172 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6173 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6174 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6175 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6176 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6177 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6178 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6179 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6180 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6181 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6182 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6183 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6184 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6185 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6186 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6187 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6188 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6189 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6190 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6191 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6192 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6193 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6194 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6195 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6196 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6197: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6198: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6199: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6200: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6201: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6202 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6203 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6204: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6205: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6206: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6207: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6208: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6209: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6210 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6211 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6212 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6213 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6214 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6215 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6216 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6217 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6218 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6219 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6220 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6221 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6222 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6223 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6224 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6225: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6226 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6227 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6228 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6229 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6230 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6231 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6232 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6233 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6234 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6235: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6236: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6237: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6238: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6239: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6240: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6241: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6242 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6243 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6244 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6245 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6246: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6247: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6248: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6249: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6250: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6251: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6252: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6253: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6254: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6255: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6256: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6257: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6258: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6259: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6260: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6261: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6262: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6263 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6264 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6265 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6266 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6267 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6268 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6269 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6270 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6271 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6272 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6273 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6274 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6275 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6276 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6277 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6278 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6279 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6280 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6281 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6282 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6283 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6284 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6285 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6286 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6287 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6288 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6289 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6290 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6291 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6292 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6293 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6294 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6295 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6296 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6297 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6298 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6299 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6300 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6301 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6302 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6303 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6304 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6305 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6306 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6307 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6308 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6309 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6310 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6311 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6312 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6313 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6314 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6315 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6316 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6317 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6318 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6319 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6320 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6321 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6322 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6323 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6324 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6325 HighTM +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6326 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6327 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6328 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6329 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6330 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6331 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6332 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6333 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6334 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6335 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6336 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6337 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6338 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6339 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6340 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6341 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6342 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6343 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6344 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6345 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6346 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6347 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6348 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6349 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6350 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6351 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6352 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6353 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6354 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6355 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6356 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6357 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6358 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6359 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6360 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6361 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6362 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6363 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6364 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6365 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6366 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6367 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6368 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6369 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6370 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6371 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6372 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6373 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6374 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6375 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6376 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6377 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6378 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6379 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6380 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6381 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6382 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6383 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6384 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6385 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6386 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6387 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6388 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6389 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6390 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6391 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6392 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6393 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6394 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6395 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6396 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6397 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6398 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6399 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6400 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6401 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6402 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6403 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6404 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6405 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6406 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6407 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6408 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6409 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6410 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6411 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6412 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6413 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6414 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6415 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6416 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6417 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6418 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6419 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6420 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6421 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6422 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6423 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6424 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6425 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6426 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6427 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6428 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6429 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6430 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6431 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6432 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6433 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6434 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6435 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6436 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6437 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6438 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6439 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6440 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6441 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6442 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6443 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6444 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6445 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6446 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6447 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6448 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6449 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6450 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6451 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6452 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6453 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6454 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6455 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6456 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6457 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6458 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6459 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6460 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6461 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6462 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6463 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6464 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6465 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6466 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6467 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6468 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6469 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6470 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6471 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6472 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6473 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6474 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6475 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6476 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6477 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6478 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6479 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6480 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6481 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6482 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6483 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6484 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6485 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6486 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6487 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6488 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6489 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6490 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6491 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6492 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6493 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6494 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6495 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6496 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6497 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6498 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6499 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6500 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6501 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6502 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6503 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6504 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6505 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6506 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6507 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6508 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6509 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6510 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6511 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6512 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6513 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6514 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6515 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6516 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6517 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6518 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6519 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6520 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6521 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6522 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6523 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6524 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6525 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6526 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6527 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6528 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6529 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6530 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6531 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6532 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6533 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6534 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6535 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6536 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6537 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6538 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6539 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6540: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6541: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6542 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6543 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6544 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6545 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6546 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6547 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6548 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6549: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6550: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6551: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6552: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6553: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6554: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6555: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6556: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6557: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6558: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6559: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6560: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6561: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6562: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6563: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6564: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6565: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6566: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6567: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6568: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6569: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6570: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6571: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6572: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6573: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6574: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6575: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6576 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6577 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6578 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6579 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6580 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6581 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6582 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6583: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6584: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6585: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6586: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6587: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6588: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6589: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6590: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6591: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6592: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6593: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6594: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6595: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6596: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6597: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6598: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6599: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6600: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6601: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6602: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6603: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6604: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6605: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6606: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6607: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6608: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6609 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6610 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6611 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6612 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6613 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6614: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6615: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6616: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6617 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6618 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6619 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6620 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6621 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6622 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6623: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6624: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6625: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6626: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6627: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6628: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6629: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6630: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6631: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6632: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6633: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6634 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6635 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6636 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6637 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6638 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6639 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6640 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6641 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6642 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6643 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6644 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6645: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6646: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6647: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6648: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6649: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6650: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6651: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6652: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6653: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6654: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6655: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6656 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6657 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6658 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6659 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6660 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6661 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6662 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6663 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6664 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6665 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6666 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6667 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6668 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6669 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6670 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6671 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6672 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6673 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6674 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6675 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6676 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6677 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6678 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6679 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6680 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6681 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6682 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6683 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6684 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6685 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6686 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6687 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6688 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6689 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6690 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6691 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6692 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6693 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6694 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6695 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6696 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6697 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6698 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6699 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6700 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6701 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6702 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6703 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6704 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6705 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6706 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6707 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6708 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6709 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6710 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6711 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6712 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6713 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6714 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6715 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6716 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6717 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6718 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6719 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6720 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6721 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6722 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6723 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6724 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6725 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6726 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6727 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6728 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6729 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6730 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6731 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6732 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6733 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6734 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6735 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6736 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6737 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6738 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6739 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6740 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6741 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6742 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6743 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6744 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6745 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6746 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6747 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6748 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6749 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6750 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6751 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6752 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6753: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6754: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6755: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6756: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6757: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6758: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6759: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6760: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6761: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6762: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6763: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6764: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6765: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6766 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6767 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6768 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6769 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6770 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6771 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6772 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6773 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6774 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6775 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6776 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6777 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6778 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6779 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6780 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6781 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6782 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6783 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6784 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6785 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6786 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6787 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6788 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6789 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6790 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6791 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6792 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6793 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6794 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6795 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6796 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6797 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6798 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6799 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6800 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6801 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6802 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6803 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6804 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6805: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6806: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6807: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6808: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6809: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6810: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6811 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6812 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6813 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6814 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6815 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6816 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6817 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6818 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6819 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6820 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6821 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6822 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6823 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6824 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6825: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6826 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6827 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6828: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6829: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6830: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6831: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6832: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6833: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6834: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6835: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6836: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6837: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6838: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6839: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6840: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6841: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6842: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6843: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6844: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6845 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6846 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6847 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6848 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6849 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6850 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6851 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6852 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6853 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6854 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6855 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6856 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6857 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6858 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6859 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6860 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6861 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6862 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6863 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6864 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6865 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6866: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6867: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6868: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6869: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6870: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6871 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6872 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6873: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6874: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6875: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6876: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6877: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6878: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6879: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6880: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6881 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6882 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6883 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6884 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6885 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6886 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6887 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6888 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6889 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6890 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6891 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6892 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6893 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6894 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6895 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6896 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6897 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6898 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6899 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6900 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6901 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6902 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6903 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6904 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6905 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6906 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6907 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6908 HighTM +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6909 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6910 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6911 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6912 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6913 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6914 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6915 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6916 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6917 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6918 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6919 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6920 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6921 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6922 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6923 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6924 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6925 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6926 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6927 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6928 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6929 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6930 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6931 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6932 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6933 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6934 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6935 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6936 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6937 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6938 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6939 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6940 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6941 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6942 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6943 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6944 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6945 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6946 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6947 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6948 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6949 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6950 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6951 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6952 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6953 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6954 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6955 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6956 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6957 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6958 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6959 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6960 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6961 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6962 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6963: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6964: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6965 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6966 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6967 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6968 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6969 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6970 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6971 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6972 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6973 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6974 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6975 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6976 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6977 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6978 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6979 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6980 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6981 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6982 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6983 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6984 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6985 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6986 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6987 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6988 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6989 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6990 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6991 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6992 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6993 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6994 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6995: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6996: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6997: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6998: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 6999: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7000: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7001: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7002: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7003: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7004: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7005: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7006: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7007: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7008: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7009: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7010: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7011 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7012 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7013 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7014 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7015 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7016 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7017 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7018 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7019 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7020 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7021 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7022 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7023 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7024 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7025 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7026 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7027 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7028 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7029 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7030 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7031 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7032 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7033 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7034 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7035 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7036 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7037 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7038: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7039 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7040 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7041 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7042 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7043 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7044 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7045 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7046 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7047 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7048 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7049 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7050 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7051 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7052 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7053 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7054 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7055 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7056 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7057 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7058 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7059: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7060 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7061: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7062: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7063: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7064: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7065: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7066: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7067: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7068: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7069: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7070 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7071: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7072: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7073: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7074: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7075 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7076 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7077: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7078: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7079: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7080 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7081: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7082: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7083: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7084 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7085 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7086 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7087 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7088 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7089 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7090 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7091 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7092 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7093 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7094 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7095 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7096 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7097 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7098 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7099 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7100 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7101 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7102 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7103 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7104 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7105 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7106 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7107 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7108 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7109 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7110 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7111: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7112 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7113: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7114: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7115 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7116 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7117 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7118 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7119 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7120 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7121 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7122 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7123 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7124 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7125 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7126 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7127 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7128 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7129 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7130 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7131 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7132 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7133 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7134 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7135 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7136 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7137 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7138 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7139 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7140 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7141 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7142 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7143 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7144 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7145 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7146 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7147 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7148 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7149 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7150 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7151 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7152 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7153 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7154 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7155 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7156 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7157 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7158 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7159 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7160 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7161 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7162 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7163 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7164 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7165 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7166 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7167 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7168 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7169 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7170 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7171 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7172 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7173 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7174 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7175 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7176 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7177 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7178 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7179 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7180 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7181 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7182 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7183 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7184 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7185 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7186: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7187: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7188 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7189 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7190 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7191 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7192: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7193 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7194 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7195 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7196 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7197 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7198 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7199: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7200: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7201: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7202: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7203: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7204: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7205: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7206: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7207: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7208: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7209: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7210 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7211 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7212 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7213 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7214 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7215 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7216 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7217 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7218 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7219 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7220 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7221 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7222 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7223: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7224: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7225 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7226: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7227: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7228: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7229 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7230 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7231 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7232 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7233 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7234 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7235 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7236 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7237 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7238 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7239 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7240 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7241 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7242 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7243 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7244 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7245 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7246 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7247 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7248 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7249 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7250 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7251 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7252 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7253 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7254 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7255 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7256 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7257 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7258 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7259 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7260 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7261: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7262: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7263: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7264: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7265: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7266: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7267: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7268: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7269: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7270: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7271: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7272: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7273: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7274: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7275: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7276: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7277: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7278: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7279: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7280 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7281 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7282 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7283 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7284: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7285 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7286 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7287 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7288 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7289 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7290 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7291 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7292 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7293 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7294 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7295 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7296 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7297 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7298 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7299 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7300 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7301 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7302 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7303 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7304 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7305 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7306 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7307 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7308 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7309 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7310 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7311 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7312 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7313 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7314 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7315 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7316 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7317 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7318 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7319 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7320 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7321 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7322 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7323 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7324 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7325 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7326 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7327 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7328 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7329: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7330 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7331: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7332 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7333 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7334: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7335 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7336 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7337: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7338: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7339 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7340: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7341 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7342 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7343 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7344 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7345 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7346 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7347 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7348 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7349 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7350 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7351 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7352 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7353 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7354 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7355 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7356 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7357 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7358 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7359 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7360 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7361 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7362 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7363 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7364 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7365 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7366 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7367 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7368 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7369 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7370 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7371 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7372 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7373: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7374: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7375 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7376 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7377 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7378: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7379: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7380: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7381: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7382: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7383: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7384: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7385 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7386: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7387 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7388 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7389 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7390 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7391 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7392 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7393 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7394 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7395 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7396 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7397: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7398: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7399: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7400 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7401: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7402 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7403 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7404 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7405: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7406: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7407: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7408: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7409: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7410 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7411: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7412: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7413 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7414 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7415 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7416 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7417 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7418 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7419 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7420 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7421 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7422 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7423 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7424 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7425 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7426 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7427 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7428: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7429: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7430: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7431: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7432 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7433 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7434 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7435 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7436 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7437 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7438 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7439 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7440 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7441 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7442 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7443 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7444 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7445 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7446 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7447 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7448 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7449 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7450 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7451 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7452 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7453 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7454 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7455 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7456 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7457 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7458 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7459 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7460 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7461 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7462 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7463 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7464 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7465 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7466 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7467 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7468 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7469 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7470 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7471 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7472: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7473: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7474: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7475: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7476: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7477: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7478: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7479: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7480 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7481 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7482 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7483 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7484 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7485 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7486 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7487 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7488 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7489 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7490 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7491 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7492 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7493 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7494 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7495 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7496 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7497 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7498 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7499 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7500 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7501 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7502 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7503 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7504 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7505 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7506 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7507 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7508 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7509 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7510 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7511 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7512 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7513 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7514 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7515 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7516 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7517 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7518 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7519 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7520 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7521 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7522 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7523 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7524 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7525 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7526 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7527 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7528 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7529 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7530 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7531 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7532 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7533 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7534 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7535 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7536 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7537 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7538 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7539 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7540 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7541 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7542 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7543 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7544 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7545 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7546 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7547 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7548 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7549: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7550: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7551 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7552 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7553 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7554 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7555 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7556: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7557: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7558: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7559: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7560: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7561: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7562: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7563: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7564: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7565: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7566: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7567: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7568: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7569: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7570 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7571 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7572 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7573 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7574: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7575 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7576 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7577 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7578 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7579 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7580 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7581 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7582 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7583 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7584 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7585 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7586 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7587 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7588 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7589 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7590 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7591 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7592 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7593 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7594 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7595 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7596 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7597 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7598 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7599 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7600 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7601 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7602 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7603 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7604 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7605 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7606 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7607: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7608 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7609: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7610: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7611 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7612 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7613 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7614 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7615 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7616: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7617: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7618 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7619 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7620 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7621 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7622 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7623 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7624 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7625 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7626 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7627 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7628 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7629 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7630 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7631 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7632 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7633 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7634 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7635 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7636 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7637 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7638 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7639 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7640 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7641 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7642 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7643 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7644 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7645 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7646 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7647 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7648 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7649 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7650: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7651: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7652 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7653: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7654 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7655 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7656 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7657 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7658 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7659 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7660 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7661 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7662 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7663 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7664 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7665 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7666: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7667: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7668 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7669 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7670 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7671 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7672 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7673 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7674 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7675 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7676 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7677 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7678 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7679 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7680 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7681 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7682 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7683 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7684 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7685 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7686 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7687 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7688 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7689 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7690 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7691 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7692 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7693 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7694 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7695 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7696 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7697 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7698 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7699 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7700 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7701 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7702 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7703 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7704 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7705 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7706 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7707 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7708 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7709 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7710 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7711 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7712 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7713 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7714 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7715 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7716 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7717 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7718 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7719 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7720 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7721 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7722 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7723 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7724 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7725 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7726 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7727 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7728 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7729 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7730 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7731 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7732 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7733 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7734: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7735: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7736: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7737: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7738: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7739: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7740 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7741 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7742 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7743 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7744: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7745: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7746: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7747 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7748 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7749 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7750 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7751 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7752 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7753 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7754 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7755 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7756 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7757 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7758 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7759 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7760 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7761 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7762 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7763 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7764 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7765 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7766 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7767 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7768 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7769 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7770 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7771 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7772 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7773 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7774: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7775: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7776: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7777: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7778: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7779 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7780 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7781 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7782 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7783 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7784 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7785 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7786 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7787 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7788 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7789 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7790 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7791 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7792 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7793 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7794 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7795 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7796 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7797 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7798 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7799 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7800 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7801 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7802 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7803 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7804 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7805 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7806 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7807 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7808 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7809 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7810 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7811 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7812 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7813 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7814 HighTM +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7815 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7816 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7817 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7818 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7819 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7820 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7821 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7822 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7823 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7824 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7825 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7826 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7827 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7828 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7829 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7830 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7831 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7832 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7833 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7834 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7835 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7836: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7837 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7838 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7839 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7840 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7841 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7842 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7843 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7844 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7845 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7846 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7847 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7848 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7849 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7850 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7851 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7852 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7853 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7854 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7855 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7856 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7857 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7858 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7859 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7860 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7861 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7862: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7863 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7864 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7865 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7866: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7867: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7868 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7869 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7870 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7871 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7872 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7873 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7874 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7875 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7876 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7877 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7878 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7879 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7880 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7881 LowGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7882 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7883 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7884 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7885 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7886 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7887 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7888 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7889 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7890 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7891 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7892 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7893 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7894 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7895 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7896 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7897 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7898 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7899 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7900 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7901 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7902 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7903 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7904 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7905 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7906 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7907 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7908: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7909: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7910: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7911: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7912: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7913: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7914: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7915 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7916 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7917 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7918 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7919 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7920 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7921 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7922 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7923 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7924 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7925 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7926 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7927 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7928 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7929 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7930 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7931 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7932 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7933 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7934 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7935 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7936 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7937 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7938 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7939 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7940 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7941 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7942 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7943: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7944: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7945: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7946 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7947 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7948 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7949 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7950 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7951 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7952 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7953 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7954 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7955 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7956 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7957 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7958 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7959 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7960 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7961 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7962 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7963 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7964 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7965 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7966 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7967 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7968 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7969 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7970 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7971 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7972 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7973 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7974 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7975 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7976 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7977 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7978 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7979 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7980 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7981 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7982 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7983 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7984 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7985 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7986 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7987 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7988 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7989 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7990 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7991 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7992 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7993: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7994 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7995 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7996: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7997: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7998: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 7999: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8000: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8001 HighTM +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8002 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8003 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8004 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8005 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8006 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8007: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8008: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8009 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8010 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8011 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8012 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8013 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8014 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8015 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8016 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8017 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8018 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8019 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8020 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8021 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8022 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8023 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8024 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8025 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8026 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8027 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8028 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8029 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8030 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8031 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8032 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8033 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8034 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8035 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8036 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8037 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8038 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8039 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8040: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8041: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8042: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8043: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8044: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8045: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8046: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8047: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8048: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8049: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8050: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8051: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8052: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8053: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8054: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8055: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8056: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8057: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8058: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8059: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8060: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8061: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8062 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8063 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8064 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8065 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8066 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8067 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8068 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8069 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8070 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8071 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8072 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8073 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8074 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8075 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8076 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8077 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8078 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8079 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8080 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8081 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8082 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8083 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8084 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8085 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8086 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8087 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8088 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8089: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8090: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8091: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8092 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8093 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8094 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8095 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8096: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8097: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8098: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8099: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8100: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8101: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8102: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8103: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8104: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8105: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8106: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8107: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8108: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8109: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8110 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8111 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8112 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8113 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8114 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8115 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8116 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8117 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8118 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8119 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8120 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8121 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8122 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8123 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8124 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8125 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8126 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8127 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8128 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8129 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8130 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8131 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8132 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8133 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8134 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8135 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8136 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8137 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8138 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8139 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8140 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8141 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8142 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8143 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8144 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8145 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8146 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8147 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8148 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8149 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8150 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8151 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8152 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8153 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8154 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8155 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8156 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8157 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8158 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8159 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8160 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8161 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8162 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8163 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8164 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8165 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8166 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8167 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8168 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8169 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8170 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8171 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8172 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8173 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8174 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8175 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8176 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8177 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8178 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8179 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8180 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8181 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8182 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8183: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8184 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8185 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8186 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8187 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8188 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8189 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8190 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8191 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8192 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8193 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8194 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8195 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8196 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8197 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8198 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8199 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8200 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8201 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8202 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8203 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8204 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8205 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8206 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8207 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8208 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8209 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8210 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8211 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8212 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8213 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8214 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8215 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8216 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8217 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8218 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8219 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8220 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8221 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8222 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8223 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8224 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8225 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8226 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8227 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8228 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8229 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8230 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8231 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8232 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8233 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8234 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8235 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8236 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8237 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8238: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8239 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8240 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8241: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8242 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8243 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8244 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8245 DimerFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8246 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8247 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8248 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8249 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8250 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8251 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8252 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8253 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8254 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8255 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8256 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8257 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8258 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8259 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8260 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8261 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8262 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8263 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8264 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8265 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8266 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8267 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8268 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8269 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8270 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8271 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8272 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8273 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8274 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8275 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8276 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8277 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8278 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8279 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8280 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8281 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8282 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8283 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8284 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8285 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8286 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8287 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8288 MaxHomopoly +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8289: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8290: AllPass +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8291 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8292 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8293 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8294 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8295 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8296 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8297 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8298 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8299 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8300 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8301 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8302 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8303 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8304 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8305 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8306 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8307 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8308 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8309 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8310 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8311 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8312 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8313 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8314 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8315 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8316 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8317 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8318 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8319 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8320 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8321 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8322 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8323 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8324 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8325 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8326 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8327 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8328 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8329 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8330 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8331 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8332 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8333 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8334 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8335 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8336 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8337 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8338 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8339 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8340 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8341 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8342 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8343 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8344 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8345 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8346 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8347 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8348 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8349 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8350 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8351 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8352 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8353 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8354 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8355 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8356 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8357 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8358 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8359 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8360 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8361 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8362 HighGC +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8363 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8364 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8365 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8366 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8367 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8368 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8369 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8370 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8371 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8372 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8373 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8374 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8375 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8376 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8377 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8378 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8379 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8380 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8381 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8382 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8383 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8384 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8385 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8386 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8387 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8388 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8389 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8390 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8391 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8392 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8393 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8394 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8395 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8396 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8397 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8398 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8399 HairpinFail +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8400 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8401 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8402 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8403 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8404 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8405 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8406 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8407 GapOnSetBase +2024-02-28 at 17:47:54 | DEBUG | RKmer: 8408 GapOnSetBase +2024-02-28 at 17:47:54 | INFO | all_genomes.align.mod.ds.ref.align: digested to 1366 FKmers and 1152 RKmers +2024-02-28 at 17:47:56 | INFO | all_genomes.align.mod.ds.ref.align: Generated 14554 possible amplicons +2024-02-28 at 17:47:56 | INFO | Added first amplicon for all_genomes.align.mod.ds.ref.align: 81 519 1 +2024-02-28 at 17:47:56 | INFO | Added overlapping amplicon for all_genomes.align.mod.ds.ref.align: 428 884 2 +2024-02-28 at 17:47:56 | INFO | Added overlapping amplicon for all_genomes.align.mod.ds.ref.align: 779 1242 1 +2024-02-28 at 17:47:56 | INFO | Added overlapping amplicon for all_genomes.align.mod.ds.ref.align: 1157 1624 2 +2024-02-28 at 17:47:56 | INFO | Added overlapping amplicon for all_genomes.align.mod.ds.ref.align: 1539 1985 1 +2024-02-28 at 17:47:56 | INFO | Added overlapping amplicon for all_genomes.align.mod.ds.ref.align: 1844 2300 2 +2024-02-28 at 17:47:56 | INFO | Added overlapping amplicon for all_genomes.align.mod.ds.ref.align: 2089 2524 1 +2024-02-28 at 17:47:56 | INFO | Added overlapping amplicon for all_genomes.align.mod.ds.ref.align: 2394 2854 2 +2024-02-28 at 17:47:56 | INFO | Added overlapping amplicon for all_genomes.align.mod.ds.ref.align: 2727 3183 1 +2024-02-28 at 17:47:56 | INFO | Added overlapping amplicon for all_genomes.align.mod.ds.ref.align: 3070 3506 2 +2024-02-28 at 17:47:56 | INFO | Added overlapping amplicon for all_genomes.align.mod.ds.ref.align: 3434 3863 1 +2024-02-28 at 17:47:56 | INFO | Added overlapping amplicon for all_genomes.align.mod.ds.ref.align: 3682 4149 2 +2024-02-28 at 17:47:57 | INFO | Added overlapping amplicon for all_genomes.align.mod.ds.ref.align: 4053 4484 1 +2024-02-28 at 17:47:57 | INFO | Added overlapping amplicon for all_genomes.align.mod.ds.ref.align: 4389 4851 2 +2024-02-28 at 17:47:57 | INFO | Added overlapping amplicon for all_genomes.align.mod.ds.ref.align: 4649 5100 1 +2024-02-28 at 17:47:57 | INFO | Added overlapping amplicon for all_genomes.align.mod.ds.ref.align: 4897 5311 2 +2024-02-28 at 17:47:57 | INFO | Added overlapping amplicon for all_genomes.align.mod.ds.ref.align: 5233 5648 1 +2024-02-28 at 17:47:58 | INFO | Added overlapping amplicon for all_genomes.align.mod.ds.ref.align: 5537 5998 2 +2024-02-28 at 17:47:58 | INFO | Added overlapping amplicon for all_genomes.align.mod.ds.ref.align: 5926 6364 1 +2024-02-28 at 17:47:58 | INFO | Added overlapping amplicon for all_genomes.align.mod.ds.ref.align: 6214 6613 2 +2024-02-28 at 17:47:59 | INFO | Added overlapping amplicon for all_genomes.align.mod.ds.ref.align: 6498 6919 1 +2024-02-28 at 17:47:59 | INFO | Backtracking... +2024-02-28 at 17:48:02 | INFO | Could not backtrack for all_genomes.align.mod.ds.ref.align +2024-02-28 at 17:48:02 | INFO | Writting output files diff --git a/primerschemes/hev/400/v1.0.0/work/plotdata.json.gz b/primerschemes/hev/400/v1.0.0/work/plotdata.json.gz new file mode 100644 index 0000000000000000000000000000000000000000..7acef499a8743c999fbc2f85cd062d7625c947da GIT binary patch literal 47390 zcmV)7K*zryiwFqPao=SE|8Q(?bYx+4VJ>QOZ*Bl=z00mGyRIbmE5>cx7m`RyqPy<< z2MnWNR8_-(>jB#xqfr0uoXH3cMef@{+rRv;|I5E?t-JZZ_J8@G z|A+tfFaO7X`mg`j|M~C#%YXiV-co!2_uv1==l`PZ|M7qLmw*5F-~0Q|_di;D{`H@q zfBj3W`5){*di=ZgFVBDauYa#S|Nr;;-v9miSN~PDr?V=b3svo$|EQ|7s)4H9@~^J( 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zk6W;{M({}^GNci4l2`6OvM2B()t1Q2dnM()^6_4&c!N~dK&(tU+^WXmKzx^*C0K=QCoIZaTjeq|0pZ^ckU2); Date: Tue, 5 Mar 2024 13:21:16 +0000 Subject: [PATCH 5/6] Changed description --- primerschemes/hev/400/v1.0.0/README.md | 6 +++--- primerschemes/hev/400/v1.0.0/info.json | 4 ++-- 2 files changed, 5 insertions(+), 5 deletions(-) diff --git a/primerschemes/hev/400/v1.0.0/README.md b/primerschemes/hev/400/v1.0.0/README.md index cd3b9e8..1dd8383 100644 --- a/primerschemes/hev/400/v1.0.0/README.md +++ b/primerschemes/hev/400/v1.0.0/README.md @@ -2,7 +2,7 @@ ## Description -A full genome scheme designed for the Hepatitis E virus +A full genome scheme designed for the Hepatitis E virus. Utilising phylogenic downsampling to reduce representation bias ## Overviews @@ -31,11 +31,11 @@ A full genome scheme designed for the Hepatitis E virus "primerclass": "primerschemes", "infoschema": "v1.3.0", "articbedversion": "v3.0", - "description": "A full genome scheme designed for the Hepatitis E virus", + "description": "A full genome scheme designed for the Hepatitis E virus. Utilising phylogenic downsampling to reduce representation bias", "derivedfrom": null, "collections": [ - "WASTE-WATER", "QUICK-LAB", + "WASTE-WATER", "WHOLE-GENOME" ] } diff --git a/primerschemes/hev/400/v1.0.0/info.json b/primerschemes/hev/400/v1.0.0/info.json index e2321fa..28269b4 100644 --- a/primerschemes/hev/400/v1.0.0/info.json +++ b/primerschemes/hev/400/v1.0.0/info.json @@ -18,11 +18,11 @@ "primerclass": "primerschemes", "infoschema": "v1.3.0", "articbedversion": "v3.0", - "description": "A full genome scheme designed for the Hepatitis E virus", + "description": "A full genome scheme designed for the Hepatitis E virus. Utilising phylogenic downsampling to reduce representation bias", "derivedfrom": null, "collections": [ - "WASTE-WATER", "QUICK-LAB", + "WASTE-WATER", "WHOLE-GENOME" ] } \ No newline at end of file From e5b3b49cecdec62cf290950d33a8491bef1cf9ec Mon Sep 17 00:00:00 2001 From: ChrisgKent Date: Tue, 5 Mar 2024 13:22:03 +0000 Subject: [PATCH 6/6] Auto updating index --- index.json | 34 +++++++++++++++++++++++++++++++++- 1 file changed, 33 insertions(+), 1 deletion(-) diff --git a/index.json b/index.json index edc68c7..7fc7075 100644 --- a/index.json +++ b/index.json @@ -1,5 +1,5 @@ { - "github-commit-sha": "8b0bc333565fdb4de318b11130957a2e03581505", + "github-commit-sha": "1fd00c0855d9a226e743546150653a2febfb2e27", "primerschemes": { "artic-measles": { "400": { @@ -400,6 +400,38 @@ } } }, + "hev": { + "400": { + "v1.0.0": { + "algorithmversion": "primalscheme3:1.1.4", + "ampliconsize": 400, + "articbedversion": "v3.0", + "authors": [ + "artic network", + "quick lab" + ], + "citations": [], + "collections": [ + "QUICK-LAB", + "WASTE-WATER", + "WHOLE-GENOME" + ], + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/hev/400/v1.0.0/info.json", + "license": "CC BY-SA 4.0", + "primer_bed_md5": "ade0aa4af6881675ffc2203377550bec", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/hev/400/v1.0.0/primer.bed", + "primerclass": "primerschemes", + "reference_fasta_md5": "fd028d0c1bda3584965792fb57cec0a5", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes-fork/main/primerschemes/hev/400/v1.0.0/reference.fasta", + "schemename": "hev", + "schemeversion": "v1.0.0", + "species": [ + 291484 + ], + "status": "draft" + } + } + }, "mers-cov": { "400": { "v1.0.0": {