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New object_overwrite_linter #2307

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Nov 19, 2023
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1 change: 1 addition & 0 deletions DESCRIPTION
Original file line number Diff line number Diff line change
Expand Up @@ -143,6 +143,7 @@ Collate:
'nzchar_linter.R'
'object_length_linter.R'
'object_name_linter.R'
'object_overwrite_linter.R'
'object_usage_linter.R'
'one_call_pipe_linter.R'
'outer_negation_linter.R'
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1 change: 1 addition & 0 deletions NAMESPACE
Original file line number Diff line number Diff line change
Expand Up @@ -105,6 +105,7 @@ export(numeric_leading_zero_linter)
export(nzchar_linter)
export(object_length_linter)
export(object_name_linter)
export(object_overwrite_linter)
export(object_usage_linter)
export(one_call_pipe_linter)
export(open_curly_linter)
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114 changes: 114 additions & 0 deletions R/object_overwrite_linter.R
Original file line number Diff line number Diff line change
@@ -0,0 +1,114 @@
#' Block assigning any variables whose name clashes with a `base` R function
#'
#' Re-using existing names creates a risk of subtle error best avoided.
#' Avoiding this practice also encourages using better, more descriptive names.
#'
#' @param packages Character vector of packages to search for names that should
#' be avoided. Defaults to the most common default packages: base, stats,
#' utils, tools, methods, graphics, and grDevices.
#' @param allow_names Character vector of object names to ignore, i.e., which
#' are allowed to collide with exports from `packages`.
#'
#' @examples
#' # will produce lints
#' code <- "function(x) {\n data <- x\n data\n}"
#' writeLines(code)
#' lint(
#' text = code,
#' linters = object_overwrite_linter()
#' )
#'
#' code <- "function(x) {\n lint <- 'fun'\n lint\n}"
#' writeLines(code)
#' lint(
#' text = code,
#' linters = object_overwrite_linter(packages = "lintr")
#' )
#'
#' # okay
#' code <- "function(x) {\n data('mtcars')\n}"
#' writeLines(code)
#' lint(
#' text = code,
#' linters = object_overwrite_linter()
#' )
#'
#' code <- "function(x) {\n data <- x\n data\n}"
#' writeLines(code)
#' lint(
#' text = code,
#' linters = object_overwrite_linter(packages = "base")
#' )
#'
#' # names in function signatures are ignored
#' lint(
#' text = "function(data) data <- subset(data, x > 0)",
#' linters = object_overwrite_linter()
#' )
#'
#' @evalRd rd_tags("object_overwrite_linter")
#' @seealso
#' - [linters] for a complete list of linters available in lintr.
#' - <https://style.tidyverse.org/syntax.html#object-names>
#' @export
object_overwrite_linter <- function(
packages = c("base", "stats", "utils", "tools", "methods", "graphics", "grDevices"),
allow_names = character()) {
for (package in packages) {
if (!requireNamespace(package, quietly = TRUE)) {
stop("Package '", package, "' is not available.")
}
}
pkg_exports <- lapply(
packages,
# .__C__ etc.: drop 150+ "virtual" names since they are very unlikely to appear anyway
function(pkg) setdiff(grep("^[.]__[A-Z]__", getNamespaceExports(pkg), value = TRUE, invert = TRUE), allow_names)
)
pkg_exports <- data.frame(
package = rep(packages, lengths(pkg_exports)),
name = unlist(pkg_exports),
stringsAsFactors = FALSE
)

# test that the symbol doesn't match an argument name in the function
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# NB: data.table := has parse token LEFT_ASSIGN as well
xpath <- glue("
//SYMBOL[
not(text() = ancestor::expr/preceding-sibling::SYMBOL_FORMALS/text())
and ({ xp_text_in_table(pkg_exports$name) })
]/
parent::expr[
count(*) = 1
and (
following-sibling::LEFT_ASSIGN[text() != ':=']
or following-sibling::EQ_ASSIGN
or preceding-sibling::RIGHT_ASSIGN
)
and ancestor::*[
(self::expr or self::expr_or_assign_or_help or self::equal_assign)
and (preceding-sibling::FUNCTION or preceding-sibling::OP-LAMBDA)
]
]
")

Linter(function(source_expression) {
if (!is_lint_level(source_expression, "expression")) {
return(list())
}

xml <- source_expression$xml_parsed_content

bad_expr <- xml_find_all(xml, xpath)
bad_symbol <- xml_text(xml_find_first(bad_expr, "SYMBOL"))
source_pkg <- pkg_exports$package[match(bad_symbol, pkg_exports$name)]
lint_message <-
sprintf("'%s' is an exported object from package '%s'. Avoid re-using such symbols.", bad_symbol, source_pkg)

xml_nodes_to_lints(
bad_expr,
source_expression = source_expression,
lint_message = lint_message,
type = "warning"
)
})
}
1 change: 1 addition & 0 deletions inst/lintr/linters.csv
Original file line number Diff line number Diff line change
Expand Up @@ -62,6 +62,7 @@ numeric_leading_zero_linter,style consistency readability
nzchar_linter,efficiency best_practices consistency
object_length_linter,style readability default configurable executing
object_name_linter,style consistency default configurable executing
object_overwrite_linter,best_practices robustness readability configurable executing
object_usage_linter,style readability correctness default executing configurable
one_call_pipe_linter,style readability
open_curly_linter,defunct
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1 change: 1 addition & 0 deletions man/best_practices_linters.Rd

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1 change: 1 addition & 0 deletions man/configurable_linters.Rd

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1 change: 1 addition & 0 deletions man/executing_linters.Rd

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11 changes: 6 additions & 5 deletions man/linters.Rd

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70 changes: 70 additions & 0 deletions man/object_overwrite_linter.Rd

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1 change: 1 addition & 0 deletions man/readability_linters.Rd

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1 change: 1 addition & 0 deletions man/robustness_linters.Rd

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