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Releases: ranking-agent/reasoner-transpiler

Release v2.2.1

30 Jul 07:03
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Same as v2.2.0 but fixes a packaging issue where value_types.json was not included

Release v2.2.0

30 Jul 06:27
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This moves most of the TRAPI formatting, attribute handling (including knowledge sources) and attribute customization from Plater into the transpiler, consolidating and cleaning it up.

This also has the first implementation of the json string 'attributes' attribute, in order to support dictionaries or nested attributes as attributes in neo4j.

Release v2.0.12

22 Apr 17:52
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This release includes a bug fix where passing None or invalid values as the subclass_depth for a cypher query would result in unintended effects.

Release 2.0.11

12 Apr 19:40
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This release causes the transpiler to throw an UnsupportedError when set_interpretation=MANY.

Release v2.0.10

12 Apr 17:32
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This release changes from is_set to the new set_interpretation attribute in TRAPI (but set_interpretation=MANY aka multi curie query is still not implemented).

Biolink model toolkit is upgraded to 1.3.0.

v2.0.9

03 Apr 20:22
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This release adds the option to specify subclass_depth for cypher queries, which allows for queries to include N-hop subclass detection in queries. Previously we only checked for one hop subclass relationships.

This release also allows for knowledge source properties to have biolink: prefixes on them again.

Release v2.0.8

22 Mar 18:58
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this version removes the expectation that primary_knowledge_source and aggregator_knowledge_source (and in practice all edge properties) will have biolink: prefixes in the graph

v2.0.7

08 Mar 17:02
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added the ability to set the biolink model to a specific version with an env var

v2.0.6

07 Mar 19:09
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  • switched from bmt-lite to bmt v1.2.1 (biolink model 4.1.4)
  • updated tests according to new biolink model
  • improved qualifier query validation with bmt, throw exception if qualifier is not valid or qualifier value does not exist in an enum

Release v2.0.5

19 Dec 20:20
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updated to new bmt-lite version (with biolink model v3.6.0),
now allowing for symmetric predicates to be queried for even if they are not 'canonical',
changing qnode_id to query_id in cypher returns