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How to get confidence value for orthogroup assignment of each protein #20

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Rohit-Satyam opened this issue Nov 17, 2024 · 0 comments
Open

How to get confidence value for orthogroup assignment of each protein #20

Rohit-Satyam opened this issue Nov 17, 2024 · 0 comments

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@Rohit-Satyam
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Hi @rderelle

In Broccoli, how do we define which are high confidence orthologs and which are low confidence? I am running Broccoli using default parameters. Is there a file where the confidence information is present for each protein per orthogroup?
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